Metagenome Family F082483

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F082483
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	60 residues
Representative Sequence	MVQQGQTFELTRCGPDGERLWAYRYRTGGRDSKRVQRGGFASEQDARDALERELERL
Number of Associated Samples	90
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.04 %
% of genes near scaffold ends (potentially truncated)	81.42 %
% of genes from short scaffolds (< 2000 bps)	84.96 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (82.301 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.009 % of family members)
Environment Ontology (ENVO)	Unclassified (29.204 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.407 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.47% β-sheet: 28.24% Coil/Unstructured: 55.29%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13602	ADH_zinc_N_2	2.65
PF01022	HTH_5	2.65
PF13424	TPR_12	2.65
PF02687	FtsX	2.65
PF00903	Glyoxalase	1.77
PF00589	Phage_integrase	1.77
PF03773	ArsP_1	1.77
PF00196	GerE	0.88
PF00107	ADH_zinc_N	0.88
PF04430	DUF498	0.88
PF02056	Glyco_hydro_4	0.88
PF00486	Trans_reg_C	0.88
PF02036	SCP2	0.88
PF00665	rve	0.88
PF12146	Hydrolase_4	0.88
PF01565	FAD_binding_4	0.88
PF01061	ABC2_membrane	0.88
PF13560	HTH_31	0.88
PF07676	PD40	0.88
PF00166	Cpn10	0.88
PF12681	Glyoxalase_2	0.88
PF01872	RibD_C	0.88
PF02518	HATPase_c	0.88
PF03161	LAGLIDADG_2	0.88
PF00753	Lactamase_B	0.88
PF13374	TPR_10	0.88
PF07883	Cupin_2	0.88
PF08386	Abhydrolase_4	0.88
PF07690	MFS_1	0.88
PF00171	Aldedh	0.88
PF01545	Cation_efflux	0.88
PF07366	SnoaL	0.88
PF00702	Hydrolase	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0701	Uncharacterized membrane protein YraQ, UPF0718 family	Function unknown [S]	1.77
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.88
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.88
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.88
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.88
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.88
COG1486	Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase	Carbohydrate transport and metabolism [G]	0.88
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.88
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.88
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.88
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.88
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.88
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.88
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.88
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.88
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.30 %
Unclassified	root	N/A	17.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.30 %
Unclassified	root	N/A	17.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.30 %
Unclassified	root	N/A	17.70 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	69.91 %
Unclassified	root	N/A	17.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.77 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	65.49 %
Unclassified	root	N/A	17.70 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	1.77 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	54.87 %
Unclassified	root	N/A	17.70 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1.77 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.77 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.88 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	51.33 %
Unclassified	root	N/A	17.70 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.77 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	1.77 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.33 %
Unclassified	root	N/A	17.70 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.77 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	1.77 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.88 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.33 %
Unclassified	root	N/A	17.70 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.77 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1.77 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.88 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.88 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.33 %
Unclassified	root	N/A	17.70 %
Deinococcus hopiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis	1.77 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	1.77 %
Nonomuraea lactucae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea lactucae	0.88 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.88 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.33 %
Unclassified	root	N/A	17.70 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1.77 %
Deinococcus hopiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis	1.77 %
Nonomuraea lactucae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea lactucae	0.88 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.88 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725003\|GPWSG_F5G3JLY01EMDR8	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300000955\|JGI1027J12803_102491104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300000956\|JGI10216J12902_116654198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300003203\|JGI25406J46586_10101861	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300004013\|Ga0055465_10284786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300005172\|Ga0066683_10145121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1456	Open in IMG/M
3300005172\|Ga0066683_10252232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1094	Open in IMG/M
3300005180\|Ga0066685_10410314	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300005186\|Ga0066676_10804943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300005332\|Ga0066388_102752057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	898	Open in IMG/M
3300005435\|Ga0070714_101533183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300005454\|Ga0066687_10027618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2467	Open in IMG/M
3300005518\|Ga0070699_102070631	All Organisms → cellular organisms → Bacteria → Terrabacteria group	520	Open in IMG/M
3300005532\|Ga0070739_10016390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6435	Open in IMG/M
3300005558\|Ga0066698_10630454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300005569\|Ga0066705_10836422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300005575\|Ga0066702_10843244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300005587\|Ga0066654_10000946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8575	Open in IMG/M
3300005587\|Ga0066654_10028383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2308	Open in IMG/M
3300005713\|Ga0066905_101162638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300005764\|Ga0066903_105488708	Not Available	669	Open in IMG/M
3300006034\|Ga0066656_10369911	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300006034\|Ga0066656_10896175	Not Available	568	Open in IMG/M
3300006791\|Ga0066653_10223874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	957	Open in IMG/M
3300006797\|Ga0066659_10056618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2502	Open in IMG/M
3300006797\|Ga0066659_11215791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300006918\|Ga0079216_11230082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300009012\|Ga0066710_100466440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1896	Open in IMG/M
3300009012\|Ga0066710_101103943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1227	Open in IMG/M
3300009156\|Ga0111538_11416413	Not Available	877	Open in IMG/M
3300009840\|Ga0126313_11604636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300010038\|Ga0126315_11100539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300010323\|Ga0134086_10418397	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300010362\|Ga0126377_11380423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300010362\|Ga0126377_12800272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300011991\|Ga0120153_1065879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	630	Open in IMG/M
3300012005\|Ga0120161_1039566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1488	Open in IMG/M
3300012096\|Ga0137389_11626895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300012199\|Ga0137383_10720236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300012204\|Ga0137374_10040906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4909	Open in IMG/M
3300012204\|Ga0137374_10613960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300012204\|Ga0137374_10749889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300012204\|Ga0137374_10903625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	648	Open in IMG/M
3300012208\|Ga0137376_10290953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1417	Open in IMG/M
3300012208\|Ga0137376_10818980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300012209\|Ga0137379_11035979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300012211\|Ga0137377_11651942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300012285\|Ga0137370_10360442	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300012350\|Ga0137372_10470208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M
3300012350\|Ga0137372_10551890	All Organisms → cellular organisms → Bacteria → Terrabacteria group	851	Open in IMG/M
3300012350\|Ga0137372_11213546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300012355\|Ga0137369_10750575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea lactucae	668	Open in IMG/M
3300012355\|Ga0137369_10887742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300012356\|Ga0137371_10723438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300012356\|Ga0137371_11013154	Not Available	629	Open in IMG/M
3300012357\|Ga0137384_11344073	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300012358\|Ga0137368_10206198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1394	Open in IMG/M
3300012360\|Ga0137375_10969603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300012360\|Ga0137375_10986014	Not Available	664	Open in IMG/M
3300012363\|Ga0137390_11514011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	611	Open in IMG/M
3300012915\|Ga0157302_10520742	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300013768\|Ga0120155_1092331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	852	Open in IMG/M
3300014154\|Ga0134075_10466863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300014157\|Ga0134078_10557903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300015170\|Ga0120098_1045388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300015264\|Ga0137403_10199420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1935	Open in IMG/M
3300015356\|Ga0134073_10332426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300015358\|Ga0134089_10269185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis	701	Open in IMG/M
3300015373\|Ga0132257_101362416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300015373\|Ga0132257_103751829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300015374\|Ga0132255_102064716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300016319\|Ga0182033_11700813	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300016422\|Ga0182039_12148490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300017654\|Ga0134069_1251210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300017657\|Ga0134074_1067054	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300017789\|Ga0136617_10371129	Not Available	1161	Open in IMG/M
3300018056\|Ga0184623_10349240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300018056\|Ga0184623_10491238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300018433\|Ga0066667_11630404	Not Available	576	Open in IMG/M
3300022694\|Ga0222623_10081580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1254	Open in IMG/M
3300025909\|Ga0207705_11293360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300025912\|Ga0207707_11346770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300026322\|Ga0209687_1011430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2949	Open in IMG/M
3300026326\|Ga0209801_1080286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1432	Open in IMG/M
3300027773\|Ga0209810_1002283	All Organisms → cellular organisms → Bacteria	23658	Open in IMG/M
3300028711\|Ga0307293_10282213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300028784\|Ga0307282_10126665	Not Available	1199	Open in IMG/M
3300028787\|Ga0307323_10374733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300028793\|Ga0307299_10046657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1593	Open in IMG/M
3300028884\|Ga0307308_10308259	Not Available	758	Open in IMG/M
3300030006\|Ga0299907_10862778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300031679\|Ga0318561_10497304	Not Available	671	Open in IMG/M
3300031719\|Ga0306917_11500569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300031720\|Ga0307469_11813875	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	590	Open in IMG/M
3300031779\|Ga0318566_10632583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300031890\|Ga0306925_10773020	Not Available	999	Open in IMG/M
3300031910\|Ga0306923_12326527	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300031938\|Ga0308175_102562916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300032001\|Ga0306922_12105240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300032067\|Ga0318524_10658212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300032261\|Ga0306920_102273777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300033158\|Ga0335077_11530412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis	637	Open in IMG/M
3300033289\|Ga0310914_11470141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300033407\|Ga0214472_10982668	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.69%
Host-Associated	Host-Associated	5.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.27%
Plants	Host-Associated → Plants	5.31%
Aquatic	Environmental → Aquatic	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.54%
Sediment	Environmental → Aquatic → Sediment	2.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.77%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Marine	Environmental → Aquatic → Marine	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.19%
Loam	Environmental → Terrestrial → Soil → Loam	5.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.65%
Ice	Environmental → Aquatic → Freshwater → Ice	0.89%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.42%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.77%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725003	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300012005	Permafrost microbial communities from Nunavut, Canada - A15_80cm_0M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWSG_00000420	2067725003	Soil	MSQQGQLVRMKATSRNGERLWAYRYRLGGRGSKRVQRGGFASERDAAAALERELERLRRERRIAR
JGI1027J12803_1024911041	3300000955	Soil	MVQQGQVFQLTRCGPDGERLWAYRYRTGGRDSKRVQRGGYAAEADARDALERELERLRREARIARRLT
JGI10216J12902_1166541982	3300000956	Soil	MVQQGQTIELTRRGPDGERLWAYRHRTGGRGSKRVQRGGFASERDARDALEREL
JGI25406J46586_101018611	3300003203	Tabebuia Heterophylla Rhizosphere	MVQQGQVFELARRGRNGQRLWAYRYRTGGRDSNRVQRGGFATEQDARDGLERELERLRRE
Ga0055465_102847862	3300004013	Natural And Restored Wetlands	MSQHGQLIQLKRRGRDGQALWAFRYRVGGRGSKRVQRGGFASEREATEALERQLERLRREQRVARSLTL
Ga0066683_101451213	3300005172	Soil	MVQQGQVFELARRGRDGERLWAYRFRTGGRGSRRVQRGGFACEQDARAALERKLDRVRRERRICR*
Ga0066683_102522323	3300005172	Soil	MVQQGQTIELTRRGADGRPLWAYRYRTGGRDSKRVQRGGFASEHDARDTLERELERVRREQRIARRLTLA
Ga0066685_104103141	3300005180	Soil	MSQQGQLIRLRRTGRNGEPLWAYRYRVGGRSSKRVQRGGFASERDAVEALERELERLRRERRVSRSLTRR*
Ga0066676_108049432	3300005186	Soil	MVQQGQVFELARRGRDGERLWAYRFRTGGRGSRRVQRGGFACEQDARAALERELDRVRRERRI
Ga0066388_1027520572	3300005332	Tropical Forest Soil	MVQQGQTIELTRRAADGERLWAYRYRTGGRDSRRVQKGGFVSADDAREALERELERCGGSGGLRGG*
Ga0070714_1015331832	3300005435	Agricultural Soil	MVQQGQTFELTRCGPDGVPLWAYRYRTGGRDSKRVQCGGFASEQDARDALERELERLRRA
Ga0066687_100276181	3300005454	Soil	MVQQGQTFELTRCGPDGERLWAYRYRTGGRDSKRVQRGGFASEQDARDALE
Ga0070699_1020706311	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MVQQGQTFELRRRGTTDERLWAYRYRAGGRDSKRVQHGGFASKQDARDALERELERLRRE
Ga0070739_100163902	3300005532	Surface Soil	MVQQGQTFELTRRGPDGQRLWAYRYRTGGRDSKRVQRGGFASEQDARDALERELERLRREGGSHGG*
Ga0066698_106304541	3300005558	Soil	MVQQGQVFELARRGRDGERLWAYRFRTGGRGSRRVQRGGFACEQDARAALERELDRVRRERRICR*
Ga0066705_108364221	3300005569	Soil	MSQQGQLFRLKRTSREGEPLWAYRYRMGGRASKRVQRGGFACERDAAEALEHELERVRRERRLA
Ga0066702_108432442	3300005575	Soil	MVQQGQTIELTRRGLGGERLWAYRYRTGGRDSKRVQRGGFASEQDARDALERELERLRRERRI
Ga0066654_100009461	3300005587	Soil	VIQQGQVFQLKRCGRDGQPQWAYRYRAGGRGSRRVQRGGFATEQDAIDALNRELDRVRREQRIPRGLTF
Ga0066654_100283831	3300005587	Soil	MVQQGQTFELTRCGPDGERLWAYRYRTGGRDSKRVQRGGFASEQDARDALERELERL
Ga0070740_101354941	3300005607	Surface Soil	MVQQGQTFELTRRGPDGKPLWAYRYRTGGRDSKRVQRGGFASEQDA
Ga0066905_1011626382	3300005713	Tropical Forest Soil	MVQQGQTFELTRRGPDGERLWAYRYRIGGRDSKRVQRGGFTSEADARAALARALEKQ*
Ga0066903_1054887082	3300005764	Tropical Forest Soil	MLQLQQGQVFELTTRGPAGERLWAFRNRAGGRDSKRVQRGGFGSEEDAR
Ga0066656_103699111	3300006034	Soil	VIQQGQVFQLKRCGRDGQPQWAYRYRAGGRGSRRVQRGGFATEQDAIDALNRELDRIRREQRIPRGLTFSE
Ga0066656_108961751	3300006034	Soil	MSQQGQLIRLKRTGRNGEPLWAYRYRVGGRSSKRVQRGGFASERDAAEASERELERLRRE
Ga0066653_102238743	3300006791	Soil	MVQQGQLIELTRRGRGGEPLWAYRFRAGGRGSKRVQRGGFASEQDARE
Ga0066659_100566181	3300006797	Soil	MVQQGQTFELTRCCPDGERLWAYRYRTGGRDSKRVQRGGFASEQDARDALEREL
Ga0066659_112157911	3300006797	Soil	MVQQGQTFELTRCGPDGERLWAYRYRTGGRDSKRVQRGGFASEQDARDALEREL
Ga0079216_112300821	3300006918	Agricultural Soil	MSQQGQLIRLKRTGRDGEPLWAYRYRVGGRASRRVQRGGFASERDAAEALERELARMRREQRVSGSLTF
Ga0079216_114681102	3300006918	Agricultural Soil	MAQQGQLIQLKRRSRDGQALWAFRYRVGGRGSKRVQRGGFLSERDAAEALER
Ga0066710_1004664401	3300009012	Grasslands Soil	MVQQGQTIELTRRGRGGERLSAYRYRTGGRDSKRVQRGGFASEQDARDALERELE
Ga0066710_1011039433	3300009012	Grasslands Soil	MSQQGQLIQLTRTGRDGEAMWAYRYRVGGRDSRRVQRGGFPSEQDAAKALERELERLRREQQVSRSLRT
Ga0066709_1024228861	3300009137	Grasslands Soil	VEKGVIAVSRQGQLIRLKSTARDGEPLWAYRYRTGGRNSERVQRGGFTSERDAAEA
Ga0111538_114164131	3300009156	Populus Rhizosphere	MVQQGQVFQLIRCGPDGERLWAYRYRTGGRDSKRVQRGGFALEADARDALERELE
Ga0126313_105875472	3300009840	Serpentine Soil	VRQQGQVFELKSTGRSGRPTWAYRYRLDGRDSRRVQRGGFTSEAGAREALER
Ga0126313_116046362	3300009840	Serpentine Soil	MSQQGQLIRLKRTGRDGEPLWAYRYRAGGRDSKRLQRGGFSSERDAAEALERDLERLRREQRVARCV
Ga0126305_111100961	3300010036	Serpentine Soil	MQQGQLIQLTRTGRDGEPLWAYRYRVGGRDSRRVQRGGFASERDAAEGLERELERLRRE
Ga0126315_111005391	3300010038	Serpentine Soil	MSQQGQLIRLKRGRDGEARWAYRYRVGGRDSKRVQRGGFASERDAAEALERELERLRRERRVSRSLSL
Ga0134086_104183971	3300010323	Grasslands Soil	MVQQGQLIELTRRGRGGEPLWAYRYRTGGRDAKRVQRGGFASEQDACDALERELERL
Ga0126377_113804232	3300010362	Tropical Forest Soil	MQQGQVFELNPSRGDGRTLWAYRYRTGGRTAKRIQRGGFASEQDARAALEQTLEKLHR
Ga0126377_128002722	3300010362	Tropical Forest Soil	MVQQGQTIELTRRGPDGERLWAYRYRTGGRGSKRVQRGGFASAQDARDALERELERLRRERRSRGG*
Ga0120153_10658791	3300011991	Permafrost	MFQQGQVFQLKRRDRDGEPLWAYRYRLAGRGSRRVQRGGFTSERDAAAALRLELDRI
Ga0120161_10395663	3300012005	Permafrost	MVQQGQTFELRRRGTSGDRLWAYRYRTGGRDSKRVQHGGFASEQDVRDALERELER
Ga0137389_116268951	3300012096	Vadose Zone Soil	MVQQGQTIELTRRGLGGERLWAYRYRTGGRDSKRVQRGGFASEQDARDALERELERLRRERRIARRLTL
Ga0137383_107202361	3300012199	Vadose Zone Soil	MVQQGQTIELTHRGPGGERLWAYRYRTGGRDSNRVQRGGFASEQDARDALKRELERVRRERRISRRLTL
Ga0137374_100409061	3300012204	Vadose Zone Soil	MSQHGQLIQLKRTGRDGEPLWAYRYRAGGRESKRVQRGGFASERDAAEALERELERLRRERRVS
Ga0137374_106139602	3300012204	Vadose Zone Soil	MSQQGQLIRLKRTGRDGEPVWAYRYRVGGRDSKRVQRGRFASERDAAEALERELERLRRE
Ga0137374_107498894	3300012204	Vadose Zone Soil	MSQQGQLIRLKRTGRDAEPLWAYRYRAGGRDSKRVQRGGFASERDAAAALERELERLRRE
Ga0137374_109036251	3300012204	Vadose Zone Soil	MSQRGQLIWLKRTSEDGEPLWAYSYRLGGRESKRLQRGGFGSERDAVEALGRDLERLRRERRVSRSLTVS
Ga0137376_102909531	3300012208	Vadose Zone Soil	VSRQGQVFQLKRRGRTGEPLWAYRYRAGGRDSRRIQRGGFASEQDAIDALE
Ga0137376_108189803	3300012208	Vadose Zone Soil	MVQQGQTIELTRRGPNGERLWAYRYRTGGRDSKRIQRGGFGSERDARDALDRELERLRRE
Ga0137379_110359792	3300012209	Vadose Zone Soil	MMQEGQTIELTRRGPNGEPLWAYRYRTGGRDSKRIQRGGFASEQDARDALERELERLRREHRIARRLTLA
Ga0137377_106983262	3300012211	Vadose Zone Soil	MVMSQQGQLIRLTRTGRGGEPLWAFRYRVAGRDSRRVQRGGFASERDAAEALEREL*
Ga0137377_116519421	3300012211	Vadose Zone Soil	MSQQGQLIRLKRTGWNGEPLWAYRYRVGGRSSKRVQRGGFASERDAVEALEREL
Ga0137370_103604422	3300012285	Vadose Zone Soil	MVQQGQVFQLTRCGHDGEPLWAYRYRTGGRDSRRVQRGGFASEHDARESLERE
Ga0137372_104702081	3300012350	Vadose Zone Soil	MVQQGQVFQLTRCGPRGERLWAYRYRIGGRDSKRVQRGGFASERDARDALE
Ga0137372_105518901	3300012350	Vadose Zone Soil	MQQGQVFELTTRAREGGRLWAYRFRVGGRGSKRIQRGGFASEQDACEALERELER
Ga0137372_112135462	3300012350	Vadose Zone Soil	MSQHGQLIRLKRRSWGGEPLWAYRFRVGGRDSKRVQRGGFASERDAAEALERELERLRREQRVSR
Ga0137369_107505751	3300012355	Vadose Zone Soil	VSQQGQLIRLKRTGQDGQPLWAYRYRMGGRDSKRVQRGGFASERDAADALEREMERLRREQRVSRSLTL
Ga0137369_108877421	3300012355	Vadose Zone Soil	MSQQGQLIRLKRKGRDGEPVWAYRYRVGGRDSKRVQRGGFVSERDAAQALDRELARLRREQR
Ga0137371_107234381	3300012356	Vadose Zone Soil	MVQQGQVFQLTRCGPRGERLWAYRYRIGGRDSKRVQRGGFASERDARDALERELARLRRGAADPPAHSR
Ga0137371_110131542	3300012356	Vadose Zone Soil	VEGVDSGKEWIPAMVQQGQTIELTRRGGGGERLWAYRYRTGGRGSKRVQRGGFASE
Ga0137384_113440731	3300012357	Vadose Zone Soil	MVQQGQIIELTRRGLDGQRLWAFRYRTGGRDSKRVQRGGFATEQDARDALDR
Ga0137368_102061981	3300012358	Vadose Zone Soil	VVVVFQQGQVFKLMSSGADGTPRWAYRYRIGGRDGKRVQRGGFASEEDARAALE
Ga0137368_108509562	3300012358	Vadose Zone Soil	MSQQGQLIRLKRKGRDGEPVWAYRYRVGGRDSKRVQRGGFASERDAAEALEREL
Ga0137375_109696032	3300012360	Vadose Zone Soil	VRQQGQVFELKSTGRSGRPTWAYRYRLNGRDSKRVQRGGFTSEADAREALERAAHRPA*
Ga0137375_109860142	3300012360	Vadose Zone Soil	MSQQGQLIRLKRKGRDGEPVWAYRYRVGGRDSKRVQRGGFASDRDAAGALEREL
Ga0137390_115140112	3300012363	Vadose Zone Soil	MVQQGQLIELTRRGRGGEPLWAYRFRAGGRGSKRVQRGGFASEQDAREALERELE
Ga0157302_105207422	3300012915	Soil	MVQQGQLIELTRRGRGGEPLWAYRFRAGGRGSKRVQRGGFASEQDAREALE
Ga0120155_10923313	3300013768	Permafrost	MQQGQVFQLKRTGRDGEPQWAYRYRAGGRDARRLQQGGFESEHDAAEALARAL
Ga0134075_104668632	3300014154	Grasslands Soil	MVQQGQIIELTRRAPGGERLWAYRFRTGGRGSRRVQRGGFASEQDARDALERELERLRRER*
Ga0134078_105579031	3300014157	Grasslands Soil	MVQQGQVFELRRSASDGERLWAFRYRTGGRDSKRVQRGGFACEQDARDALDRELERVRRERRIS
Ga0120098_10453882	3300015170	Fossill	KRASREREPLWAYRYRVGGRGSRRVQRGGFASEEDAVAALERELERVRRERRIHAA*
Ga0137403_101994204	3300015264	Vadose Zone Soil	MVQQGQVFELTRCGRGGERLWAYRYRTGGRGSRRVQRGGFASEQDARDALERELERM
Ga0134073_103324261	3300015356	Grasslands Soil	MVQQGQTIELTRRGLGGERLWAYRYRTGGRDSKRVQRGGFASEQDARDALERELERLRRERRIARRLT
Ga0134089_102691851	3300015358	Grasslands Soil	MVQQGQTFELTLRGPGGERLWAYRYRTGGRDSKRVQRSGFASEQDARDALDSELERLRREQRISRRLT
Ga0132257_1013624161	3300015373	Arabidopsis Rhizosphere	MVQQGQILELTRRAADGNRLWAYRYRTGGRDSTRVQRGGFVSAEDAGEALQRELERMRRERRIARRLTL
Ga0132257_1037518292	3300015373	Arabidopsis Rhizosphere	MVQQGQTIELTRRGSGGERLWAYRYRTGGRDSKRIQRGGFGSEQDARDGLE
Ga0132255_1020647162	3300015374	Arabidopsis Rhizosphere	VKKELTSAMVQQGQIFELTRRAADGNRLWAYRYRTGGRDSKRVQRGGFVSAEDAREALE
Ga0182033_117008131	3300016319	Soil	MLQQGQIFELTTRGPAGERRWAFRYRTGGRDSKRVQRGGFGSEEDARAALERA
Ga0182039_121484901	3300016422	Soil	MVQQGQIFELARRAADGERLWAYRYRSGGRDSKRVQRGGFVSAEDARESLERELER
Ga0134069_12512102	3300017654	Grasslands Soil	MVQQGQVFELARRGRDGERLWAYRFRTGGRGSRRVQRGGFACEQDARAALERELDR
Ga0134074_10670541	3300017657	Grasslands Soil	MVQQGQVFELTRCGANGERLWAYRYRTGGRDSKRIQRGGFAAKQDARDGSSVNLSGFDAN
Ga0136617_103711291	3300017789	Polar Desert Sand	MVQQGQTFELAHRGPGGEPLWAYRYRTGGRDSKRVQRGGFASEQDARDALEGE
Ga0184623_103492403	3300018056	Groundwater Sediment	MVQQGQTIELTRRGADGRPLWAYRYRTGGRDSKRVQRGGFASEHDARDALERELERVRREQRIA
Ga0184623_104912382	3300018056	Groundwater Sediment	MSQQGQLVQLKRTGRDGEPLWAYRYRVGGRDSKRVQRGGFASERDAAGALKRDLERLRRE
Ga0066667_116304042	3300018433	Grasslands Soil	MVQQGQTIELTRRGLGGERLWAYRYRTGGRDSKRVQRCGFASEQDARD
Ga0066667_118063212	3300018433	Grasslands Soil	MVQQGQLIELTRCGRGGEPLWEYRLRAGGRGSMRVQRVGWASAQDTCGRG
Ga0222623_100815801	3300022694	Groundwater Sediment	MSQQGQLIQLTRRGRDGEPLWAYRYRVGGRDSKRVQRGGFVSERDAAEALERELELERLR
Ga0207705_112933602	3300025909	Corn Rhizosphere	MVQQGQTFELTRRGPDGQRLWAYRYRTGGRDSKRVRRGGFASEQGARDVLERELE
Ga0207707_113467701	3300025912	Corn Rhizosphere	MVQQGQTIELTRRGPDGERLWAYRHRTGGRGSKRVQRGGFASEEDARDALERLRRERRVTRRLTLTEL
Ga0209687_10114301	3300026322	Soil	MVQQGQTFELTRCGPDGERLWAYRYRTGGRDSKRVQRGGFASEQDARDALERELERLRRERRI
Ga0209801_10802862	3300026326	Soil	MVQQGQTIELTRRGPGGERLWAYRYRTGGRDSKRVQHGGFASEQDARAALECEL
Ga0209810_100228310	3300027773	Surface Soil	MVQQGQTFELTRRGPDGQRLWAYRYRTGGRDSKRVQRGGFASEQDARDALERELERLRREGGSHGG
Ga0307293_102822132	3300028711	Soil	VSQQGQLIRLKSRARDGEPLWAYRYRTGGRNSERVQRGGFTSERDAAEALQRELE
Ga0307282_101266651	3300028784	Soil	MVQQGLVFQLTRCGPGGERLWAYRYRTGGRESERVQRGGFASEQDARDALERE
Ga0307323_103747331	3300028787	Soil	MVQQGLVFQLTRCGPGGERLWAYRYRTGGRESERVQRGGFASEQDARDALERELERLRRERRIPRSLTL
Ga0307299_100466572	3300028793	Soil	MSQQGQLIQLTRRGRDGEPLWAYRYRVGGRDSKRVQRGGFVSERDAAEALERELERLR
Ga0307308_101781772	3300028884	Soil	MSQQGQLIQLKRIARDGEPLWAYRYRVGGRDSQRVQRGGFASERDAAEALER
Ga0307308_103082592	3300028884	Soil	MSQHGQLVRLKRTGRDGEPTWAYRYRVGGRDSKRVQRGGFASERDAAEALERELERLR
Ga0299907_108627781	3300030006	Soil	MRQQGQILRLKASGADGRPLWAYRYRDGGRGSKRVQRGGFASEHDAREALKRALGTLRR
Ga0318561_104973041	3300031679	Soil	MVQQGQVLELNPGRGDGRALWAYRYRAGGRTAKRIQRGGFASEQDARAALERALEKLRRGEGRGRLLTL
Ga0306917_115005691	3300031719	Soil	MVQQGQVLKLNPGRVDGRTLWAYRYRAGGRTAKRIQRGGFASEQDARAALERALETLRRRQGSGRMLT
Ga0307469_118138751	3300031720	Hardwood Forest Soil	MVQQGQLIELTRRGRGGEPLWAYRFRAGGRGSKRVQRGGFASEQDAREALERELERLRRERRIA
Ga0318566_106325832	3300031779	Soil	MVQQGQVLELNAGRVDGRTLWAYRYRAGGRTAKRIQRGGFASEQDARAALERALETLR
Ga0306925_107730202	3300031890	Soil	MVQQGQVLELNPGRGDGRALWAYRYRAGGRTAKRIQRGGFASEQDARAALERALEKLRRG
Ga0306923_123265272	3300031910	Soil	MLQQGQIFELTTRGPAGERRWAFRYRTGGRDSKRVQRGGFGSEEDARAALERALAMIR
Ga0308175_1025629162	3300031938	Soil	MIQQGQVFKLTSVTRDGGTLWAYRYRTAGRNSKRIQRGGFASEQDAR
Ga0306922_121052401	3300032001	Soil	MVQRGQVLELNAGRVDGRTLWAYRYRAGGRTAKRIQRGGFASEQDARAALERALETLRRREGSGR
Ga0318524_106582121	3300032067	Soil	MVQQGLVFELRRRARGDGDRLWAYRFRTGGRDSKRVQRGGFACELDARNALDRELERVRREGTSVLPGLG
Ga0306920_1022737772	3300032261	Soil	MLQQGQVFELGTTGGDGVPLWAYRYRAGGRTAKRLQRGGFASEQDAHAALERALERLRRRQNKGRML
Ga0335077_115304122	3300033158	Soil	MVQQGQTFELTRRGPDGVPLWAYRYRTGGRDSKRVQRGGFASEQDARDALERELERLRRERRI
Ga0310914_114701411	3300033289	Soil	VMVQQGQTIELTRREMDGQRLWAYRYRTGGRNSKRIQRGGFRSEADARVALERVLETHRGGRGVGRRL
Ga0214472_109826683	3300033407	Soil	MIQQGQVFELKRASREREPLWAYRYRVGGRGSRRVQRGGFASEADAAAALERELERVRRERRVSRSLT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082483

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences