Metagenome / Metatranscriptome Family F082521

Basic Information
Family ID	F082521
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	108 residues
Representative Sequence	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGESAWSSPQQGLEMLLGI
Number of Associated Samples	102
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	12.39 %
% of genes from short scaffolds (< 2000 bps)	10.62 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Unclassified (91.150 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (30.088 % of family members)
Environment Ontology (ENVO)	Unclassified (30.973 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (84.071 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.56% β-sheet: 25.00% Coil/Unstructured: 48.44%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF05118	Asp_Arg_Hydrox	4.42
PF03796	DnaB_C	0.88
PF13671	AAA_33	0.88
PF02026	RyR	0.88
PF06941	NT5C	0.88
PF11246	Phage_gp53	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	4.42
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.88
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.88
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	0.88

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.15 %
All Organisms	root	All Organisms	8.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.15 %
Viruses	superkingdom	All Organisms → Viruses	4.42 %
cellular organisms	root	All Organisms → cellular organisms	4.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.42 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.42 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.42 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.42 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	3.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.42 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.42 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	3.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.42 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	3.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Scaffold	Taxonomy	Length	IMG/M Link
3300007653\|Ga0102868_1095227	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	678	Open in IMG/M
3300007956\|Ga0105741_1124016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	632	Open in IMG/M
3300009027\|Ga0102957_1057071	All Organisms → Viruses → Predicted Viral	1341	Open in IMG/M
3300009420\|Ga0114994_10071053	All Organisms → Viruses → Predicted Viral	2379	Open in IMG/M
3300017952\|Ga0181583_10213167	All Organisms → Viruses → Predicted Viral	1261	Open in IMG/M
3300018424\|Ga0181591_10679230	Not Available	727	Open in IMG/M
3300021958\|Ga0222718_10340749	Not Available	766	Open in IMG/M
3300021964\|Ga0222719_10043940	All Organisms → Viruses → Predicted Viral	3433	Open in IMG/M
3300024267\|Ga0228623_1048312	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	838	Open in IMG/M
3300024294\|Ga0228664_1093022	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	658	Open in IMG/M
3300031140\|Ga0308024_1000326	All Organisms → cellular organisms → Bacteria → Proteobacteria	19858	Open in IMG/M
3300031253\|Ga0307490_1013182	Not Available	631	Open in IMG/M
3300031519\|Ga0307488_10110317	All Organisms → Viruses → Predicted Viral	1989	Open in IMG/M
3300031608\|Ga0307999_1107156	Not Available	646	Open in IMG/M
3300031721\|Ga0308013_10209168	Not Available	716	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	90.27%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	7.08%
Sediment	Environmental → Aquatic → Sediment	2.65%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	49.56%
Coastal	Environmental → Aquatic → Marine → Coastal	15.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.73%
Oceanic	Environmental → Aquatic → Marine → Oceanic	7.96%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	7.08%
Strait	Environmental → Aquatic → Marine → Strait	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.65%
Inlet	Environmental → Aquatic → Marine → Inlet	1.77%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.77%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	30.09%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	15.93%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	12.39%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.73%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	7.08%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	7.08%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	7.08%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.77%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.89%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	30.09%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	12.39%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	8.85%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	6.19%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	6.19%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.42%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	4.42%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.54%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.54%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.65%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	2.65%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	2.65%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.77%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.77%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.89%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.89%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.89%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.89%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.89%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.89%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.89%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.89%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.89%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.89%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000265	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_10	Environmental	Open in IMG/M
3300001778	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM18, ROCA_DNA027_0.2um_3g	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300005838	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_130m_DNA	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007623	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MG	Environmental	Open in IMG/M
3300007625	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02	Environmental	Open in IMG/M
3300007653	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3	Environmental	Open in IMG/M
3300007667	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300007956	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459A_0.2um	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008964	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009003	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009606	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012967	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016732	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101403AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016746	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101401AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016749	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011512AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016771	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019262	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101412AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019266	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101407AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019280	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071401AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019283	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101404CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020013	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041406CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300024231	Seawater microbial communities from Monterey Bay, California, United States - 43D	Environmental	Open in IMG/M
3300024258 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_120_MG	Environmental	Open in IMG/M
3300024267	Seawater microbial communities from Monterey Bay, California, United States - 28D	Environmental	Open in IMG/M
3300024281	Seawater microbial communities from Monterey Bay, California, United States - 11D	Environmental	Open in IMG/M
3300024294	Seawater microbial communities from Monterey Bay, California, United States - 78D	Environmental	Open in IMG/M
3300024296	Seawater microbial communities from Monterey Bay, California, United States - 36D	Environmental	Open in IMG/M
3300024335	Seawater microbial communities from Monterey Bay, California, United States - 90D	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024359	Seawater microbial communities from Monterey Bay, California, United States - 34D	Environmental	Open in IMG/M
3300025636	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025695	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025701	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025767	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025870	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)	Environmental	Open in IMG/M
3300026130	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026138	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026187	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027190	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733 (SPAdes)	Environmental	Open in IMG/M
3300027250	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02 (SPAdes)	Environmental	Open in IMG/M
3300027525	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705 (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300028414	Seawater microbial communities from Monterey Bay, California, United States - 33D	Environmental	Open in IMG/M
3300031140	Marine microbial communities from water near the shore, Antarctic Ocean - #420	Environmental	Open in IMG/M
3300031253	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SI3U	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031608	Marine microbial communities from water near the shore, Antarctic Ocean - #1	Environmental	Open in IMG/M
3300031721	Marine microbial communities from water near the shore, Antarctic Ocean - #181	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_101765513	3300000116	Marine	MANHVHFYVQFHQINDEARTKXKEMFGRIREDAPHKWXSDIFVEGDLTYEETEKYEWTTVNIGPKWSYFEDYSAEEGDVYFSGESAWCAPTDGLQKLLGILVEYDPKIITSISYEDEGPNFFGA
LP_A_09_P04_10DRAFT_10641092	3300000265	Marine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTVNIGPKWSYFEDYSAEEGDVYFSGESAWCAPTDGLQKLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEEMFDGIEYDYEETIDLV
ACM18_10721654	3300001778	Marine Plankton	MANHVHYSVNFHQINEQARAKLQELFSRIRTDNDYNWFSDIFVDGEELTYEESEQYSWTTENIGPKWCYFEDYSAAEGDVYFNGESAWSPPEEGLVKLLEILEEHDPN
JGI26273J51734_101670341	3300003620	Marine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFTGESAWSSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEELFDGIEYDYEETIDLVINDSEQLT
Ga0055584_1007869264	3300004097	Pelagic Marine	MANHVHFAVAFHQINDDARMKLQEMFGRIREDTPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEATDVYFTGESAWASPQEGLEKLLGILVEYDPKIITSITY
Ga0066222_13161581	3300004460	Marine	MANHVHFAVAFHQINDEARIKLKSMFERIREDSPHAWFSDIFVEGDLTYEETEKYEWTTANIGPKWCYFEDRVTDENDVYFT
Ga0076924_10695491	3300005747	Marine	MANHVHFSVNFHQINDAAKAKLKEMFGRIREDAPHNWFSDIFVEGDTTYEMTEKYEWTTSHIGPKWSYFEDYDAEGEPYFNGEAAWGPPTQGVVKLLEIL
Ga0008649_103469912	3300005838	Marine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFTGESAWSSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEELFDGIEYDYEETIDLVI
Ga0098048_11193883	3300006752	Marine	MANHVHFAVNFHRINDDAKAKLKEMFGRIREDAPHKWFSDIFVEGDTTYEMTEKYEWTCEHIGPKWSYFEDYDAEDEPYFNGE
Ga0075479_102034111	3300006870	Aqueous	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHKWFSDMFVEGDTTYEMTEKYEWTTSHIGPKWSYFEDYDAEGEPYFNGEAAWGPPTQGVVKLLEILKEYDPKIIATMTY
Ga0098051_10536351	3300006924	Marine	MANHVHFAVAFHQINDDARMKLKEMFGRIREESSHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWCYFEDYSAEATDV
Ga0098051_11034593	3300006924	Marine	MANHVHFAVNFHRINDDAKAKLKEMFGRIREDAPHNWFSDIFVDGEELTYEQSEKYEWTTANIGPKWSYFEDYDAEDEPYFNGEAAWSPPTDGVIKLVKILKEYDPKII
Ga0102821_12001132	3300007557	Estuarine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTVNIGPKWSYFEDYSAEEGDVYFSGESAWCAPTDGLQKLLGILVEYDPKIITSISYEDE
Ga0102948_12848631	3300007623	Water	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHKWFSDIFVEGDTTYEMTEKYDWTTEHIGPKWSYFEDYDAEGEPYFNGEAAWSPPTD
Ga0102870_12057032	3300007625	Estuarine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTVNIGPKWSYFEDYSAEEGDVYFSGESAWCAPTDGLQKLLGILV
Ga0102868_10952273	3300007653	Estuarine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDWTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFTGESAWSSPQQGLEMLLGILVEY
Ga0102910_10512884	3300007667	Estuarine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTVNIGPKWSYFEDYSAEEGDVYFSGESAWCAPTDGLQKLLGILVEYDPKIITSISYED
Ga0102951_11468542	3300007725	Water	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHKWFSDIFVEGDTTYEMTEKYEWTTANIGPKWSYFEDYDAEGEPYFNGEAAWSPPTDGVVKLLGILKEYDPKIIATMTYEDEE*
Ga0105741_11240161	3300007956	Estuary Water	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWSTANIGPKWSYFEDYSAEEGDVYFSGESAW
Ga0105746_12078732	3300007973	Estuary Water	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFSGESAWCAPTDGLQKLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEELFDGIE
Ga0102889_11464401	3300008964	Estuarine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFSGESAWTSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEEMFDG
Ga0102960_12904082	3300009000	Pond Water	MANHVHFAVNFHRINDDAKAKLKEMFGRIREDAPHQWFSDMFVEGDTTYEMTEKYEWTCEHIGPKWSYFEDFDVEGEPY
Ga0102963_13245622	3300009001	Pond Water	MANHVHYAVNFHQINDAAKAKLQEMFSRVREDTNYRWLSDIFVEGDLTYEETEKYAWTTEHIGPKWSYIEDYEVDTDEPYFNGEAAWSA
Ga0102813_101560410	3300009003	Estuarine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTVNIGPKWSYFEDYSAEEGDVYFSGESAWCAPTDGLQKLLGILVEYDPKIITS
Ga0102957_10570711	3300009027	Pond Water	MANHVHFAVNFHRINDDAKAKLKEMFGRIREDAPHQWFSDMFVEGDTTYEMTEKYEWTCEHIGPKWSYFEDFDVEGEPYFSGEAAWGPPTQGVTKLLGILKEYDPKIIATMTYED
Ga0102911_10720033	3300009049	Estuarine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFSGESAWTSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEEMFD
Ga0102815_103462341	3300009080	Estuarine	MANHVHFAVNFHRINDDAKAKLKEMFGRIREDAPHQWFSDMFVEGDTTYEMTEKYEWTCEHIGPKWSYFEDFDAE
Ga0102812_101276701	3300009086	Estuarine	MANHVHFAVNFHRINDDAKAKLKEMFGRIREDAPHQWFSDMFVEGDTTYEMTEKYEWTCEHIGPKWSYFEDFDAEDEPYFNGEAAWGPPTQGVTKLL
Ga0118687_102334153	3300009124	Sediment	MANHVHFAVNFHRINDDAKAKLKEMFGRIREDAPHQWFSDMFVEGDTTYEMTEKYEWTTANIGPKWSYFEDFDVEGEPYFSGEAAWGPPTQGVTKLLGILKEYDPKIIATMTYE
Ga0118687_102792913	3300009124	Sediment	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHNWFSDIFVEGDTTYEMTEKYEWTTSHIGPKWSYFEDYDAEGEPYFNGEAAWGPPTQGVTKLLGILKEYDPKIIATMTYE
Ga0118687_104159391	3300009124	Sediment	MANHVHYAVNFHQINDAAKAKLQEMFSRVREDTNYRWLSDIFVEGDLTYEETEKYAWTTEHIGPKWSYIEDYEVDTDEPYFNGEAAWSAPEMGLVKLLEILEEYDPNIITSMTYEDEMPN
Ga0114994_100710538	3300009420	Marine	MANHVHFAVAFHQINDEARIKLKSMFERVRKDSPHDWFSDIFVEGDLTYEETEKYEWTTANIGPKWCYFEDRVTDENDVYFTGESAWSAPTEGLQKLLGILVEYDPKIITSICYEDEGPNFFGVEIYDGEEMYDGSEYSYEETIDLVIKDSERLTEDSYNTETEE
Ga0115102_108874893	3300009606	Marine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGESAWTSP
Ga0129343_10642231	3300012967	Aqueous	MANHVHFSVNFHQINDAAKAKMKEMFGRIREDAPHQWFSDIFVEGDTTYEMTEKYEWTCEHIGPKWSYFEDFDVEGEPYFSGEAAWGPPTQGVTKLLGILKEYDPKIIATMTY
Ga0182057_11833801	3300016732	Salt Marsh	MANHVHFAVNFHQINDEARAKLKEMFGRIREDGNYRWFSDIFVEGDLTYEETEKYAWTTENIGPKWCYFEDYDAEGEPYFNGEAAWSAPEE
Ga0182055_10853512	3300016746	Salt Marsh	MANHVHYSVNFHQINEQARAKLQELFSRVRTDGNYQWFSDIFVDGDELTYEQTEQYSWTLENIGPKWCYFEDYSAAEGDVYFNGEA
Ga0182053_12126412	3300016749	Salt Marsh	MANHVHFSVNFHQINDVAKAKLKEMFGRIREDAPHKWFSDMFVEGDTTYEMTEKYEWTCEHIGPKWSYFEDYDTEGDPYFNGEAAWSPPTDGVIKLLKILKEY
Ga0182082_14944582	3300016771	Salt Marsh	MANHVHFSVNFHQINDAAKAKLKEMFGRIREDAPHKWFSDMFVEGDTTYEMTEKYEWTTANIGPKWSYFEDYDAEGEPYFNGEAAWGPPTDGVTKLLKILSEFDPKMITSMTYE
Ga0181401_11297761	3300017727	Seawater	MANHVHFYVQFHQINDDARMKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGESAWSSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYEGEEMFGRIREDAPHK
Ga0181421_11426482	3300017741	Seawater	MANHVHFYVQFHQINDDARMKLKEMFGRIRDDAPHKWFSDIFVEGDLTYEDTEKYEWTTANIGPKWSYFEDYSAEEGDVYFSGESAWSSPQQGLEMLLGILVEHDPKIITSISYEDEGPNFFGADIYEGEEMFDGVEY
Ga0181399_11322852	3300017742	Seawater	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGESAWSSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYDGE
Ga0181380_11163501	3300017782	Seawater	MANHVHFYVQFHQINDDARMKLKEMFGRIRDDAPHKWFSDIFVEGDLTYEDTEKYEWTTANIGPKWSYFEDYSAEEGDVYFSGE
Ga0181565_104010541	3300017818	Salt Marsh	MANHVHFSVNFHRINDAAKGKLKEMFGRIREDGNYRWFSDMFVEGDTTYEMVEKYDWTCEHIGPKWSYLEDYDAEGEPYFNGEAAWSPPTQGVTKLLGILKEY
Ga0181584_103119821	3300017949	Salt Marsh	MANHVHFSVNFHRINDDAKAKLKEMFGRIREDAPHKWFSDIFVEGDTTYEMTEKYEWTTANIGPKWSYFEDYDAEGEP
Ga0181607_104371121	3300017950	Salt Marsh	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDTPWNWFSDIFVEGDITYEMTEKYEWTCEHIGPKWIYFEDYDTEGDPYFNGEAAWSPPT
Ga0181607_106325831	3300017950	Salt Marsh	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHKWFSDIFVEGDTTYEMTEKYDWTTEHIGPKWSYFEDYDAEGEPYFNGEAAWS
Ga0181583_102131674	3300017952	Salt Marsh	MANHVHFSVNFHQINEQARAKLQELFSRIRTDNDYSWFSDIFVDGEELTYEESEQYSWTTEHIGPKWCYFEDYSAAENDVCFNGESAWSPPEQGLVQLLEILEQYDPN
Ga0181583_104945221	3300017952	Salt Marsh	MANHVHFSVNFHRINDDAKAKLKEMFGRIREDAPHDWFSDIFVDGKELTYEQSEKYEWTTANIGPKWSYFEDYDVEGEPYFNGEAAWGPPTDGVTKLLK
Ga0181583_106744921	3300017952	Salt Marsh	MANHVHFSVNFHRINDAAKGKLKEMFGRIREDGNYRWFSDMFVEGDTTYEMVEKYDWTCEHIGPKWSYLEDYDAEGEPYFNG
Ga0181587_1000460923	3300017968	Salt Marsh	MANHVHFSVNFHQINDAAKAKLKEMFGRIREDAPHKWFSDMFVEGDTTYEMTEKYEWTTANIGPKWSYFEDYDAEGEPYFNGEAAWGPPTQGVVKLLEI
Ga0181585_107617881	3300017969	Salt Marsh	MANHVHFSINFHRINDAAKGKLKEMFGRIREDGNYRWFSDMFVEGDTTYEMVEKYDWTCEHIGPKWSYLEDYDAEGEPYFNGEAAWS
Ga0181600_103544992	3300018036	Salt Marsh	MANHVHFSVNFHQINDAAKEKLKEMFDRIREDAPHKWFSDMFVEGDTSYEMTEKFEWTYEHIGPKWSYFEDYHAEGEPYFNGEAAWSPPTDGVVKLLKILKEYDPKIIATMTY
Ga0181572_108528392	3300018049	Salt Marsh	MANHVHFSVNFHQINDAAKDKLKELFGRIREDGNYRWFSDIFVEGDLTYEETEKYAWTTENIGPKWCYFEDYDAEGEPYFNGEAAWSAPEEGLVKLL
Ga0181592_105918393	3300018421	Salt Marsh	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHNWFSDIFVEGDTTYEMTEKYEWTCEHIGPKWSYFEDYDAEGEPYFNGEAAWSPPTNGVIKLLGILKEYDPKIIATMTYE
Ga0181591_101002085	3300018424	Salt Marsh	MANHVHYSVNFHQINEQARAKLQELFSRVRTDGNYQWFSDIFVDGDELTYEQTEQYSWTLENIGPKWCYFEDYSAAEGDVYFNGEAAWSPPEEGLV
Ga0181591_106792301	3300018424	Salt Marsh	MANHVHFSVNFHRINDDAKAKLKEMFGRIREDAPHKWFSDMFVEGDTTYEMTEKYEWTTANIGPKWSYFEDYDAEGEPYFNGEAAWG
Ga0182066_10420641	3300019262	Salt Marsh	MANHVHFSVNFHQINDEARAKLKEMFGRIREDGNYRWFSDIFVEGDLTYEETEKYSWTTEHIGPKWCYFEDYDAEGEPY
Ga0182061_16106562	3300019266	Salt Marsh	MANHVHFAVNFHQINDEARAKLKEMFGRIREDGNYRWFSDIFVEGDLTYEETEKYSWTTEHIGPKWCYFEDYDAEGEPYFNGEAAWSA
Ga0182061_16936501	3300019266	Salt Marsh	MANHVHFSVNFHQINDAAKDKLKELFGRIREDGNYRWFSDIFVEGDLTYEETEKYAWTTENIGPKWCYFEDYDAEGEPYFNGEAAWSAPEEGLVKLLEILEEYDPNIITSMTYE
Ga0182068_12594384	3300019280	Salt Marsh	MANHVHFSINFHRINDAAKGKLKEMFGRIREDGNYRWFSDMFVEGDTTYEMVEKYDWTCEHIGPKWSYLEDYDAEGEPYFNGEAAWSAPTNGLIKLLGILKEY
Ga0182058_10493722	3300019283	Salt Marsh	MANHVHFSVNFHQINDAAKDKLKELFGRIREDGNYRWFSDIFVEGDLTYEETEKYAWTTENIGPKWCYFEDYDAEGEPYFNGEAAWSAPEEGLVKLLEIL
Ga0181562_101358441	3300019459	Salt Marsh	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHKWFSDMFVEGDTTYEMTEKYEWTTANIGPKWSYFEDYDAE
Ga0182086_12088523	3300020013	Salt Marsh	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHKWFYDMFVEGDTTYEMTEKYDWTTEHIGPKWSYFEDYDAEGEPYFNGEAAWSP
Ga0181570_100001481	3300020207	Salt Marsh	MANHVHFAVNFHQINDEARAKLKEMFGRIREDGNYRWFSDIFVEGDLTYEETEKYAWTLEHIGPKWSYIEDYDV
Ga0211577_107723592	3300020469	Marine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGESAWTSPQQGLEMLLGILVEYDPKIITSI
Ga0213863_101897211	3300021371	Seawater	MANHVHFSVNFHQINDAAKAKLKEMFGRIRQHGDYRWFSDMFVEGDTTYEMVGKYDWTCEHIGPKWSYLEDYDAEGEPYFNGEAAWSAPTNGLIKLLGILKEYD
Ga0213864_106455921	3300021379	Seawater	MANHVHFSVNFHQINDAAKDKLKELFGRIRTDNNYHWFSDIFVEGDLTYEETEKYSWTTEHIGPKWCYFEDYDAEGEPYFNGEAAWSAPEQGLVKLLEILEKYDPKIITSMTYE
Ga0222717_106752191	3300021957	Estuarine Water	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEDTEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGESAWSSPQQGLEMLLGILVEYDPKIITS
Ga0222718_103377231	3300021958	Estuarine Water	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHKWFSDMFVEGDTTYEMTEKYEWTTSHIGPKWSYFEDYDAEG
Ga0222718_103407493	3300021958	Estuarine Water	MANHVHFAVNFHRINDDAKAKLKEMFGRIREDAPHQWFSDIFVDGKELTYEESEKYAWTTENIGPKWSYFEDYDVEGE
Ga0222719_1004394013	3300021964	Estuarine Water	MANHVHFSVTFHHINDDAKAKLKEMFGRIREDAPHNWFSDIFVEGDTTYEMTEKYEWTTANIGPKWSYFEDYDAEGEPYFNGEAAWGPPTQGVV
Ga0222719_106554541	3300021964	Estuarine Water	MANHVNFNVTFHQINDAAKAKLNEMYGRIRKENNYQWLSDMFVEGDLTYEETEKYTWTTENIGPKWSYLNDFDENGFQGEAAWSAPVVGLVKLLTILEEFDPKMITSITYEDESPNFVGWEVYEGSECYDGEEEDWEEIRERVI
Ga0196901_12673392	3300022200	Aqueous	MANHVHFSVNFHQINDAAKEKLKEMFDRIREDAPHKWFSDMFVEGDTTYEMTEKYEWTYEHIGPKWSYFEDYH
Ga0255753_10634268	3300022926	Salt Marsh	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDSPHKWFSDIFVEGDTTYEMTEKYDWTTEHIGPKWSYFEDYDAEGELIYFIGEAAWSPPTDGVV
Ga0255769_103752303	3300022927	Salt Marsh	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHKWFSDMFVEGDTTYEMTEKYEWTCEHIGPKWSYFEDYDTEGDPYFNGEAAWS
Ga0255781_100734811	3300022934	Salt Marsh	MANHVHYSVNFHQINEQARAKLQELFSRVRTDGNYQWFSDIFVDGDELTYEQTEQYSWTLENIGPKWCYFEDYSAAEGDVYFNGEAAWSAPEEGLVKLLEILEEHDPNIITS
Ga0255762_103399763	3300023119	Salt Marsh	MANHVHYSVNFHQINEQARAKLQELFSRVRTDGNYQWFSDIFVDGDELTYEQTEQYSWTLENIGPKWCYFEDYSAAEGDVYFNGEAAWS
Ga0255776_103785723	3300023173	Salt Marsh	MANHVHFSVNFHQINDAAKAKLKEMFGRIREDAPHKWFSDMFVEGDTTYEMTEKYEWTTANIGPKWSYFEDYDAEGEPYFNGEAAWGPPTQGVVKL
Ga0255777_104129613	3300023175	Salt Marsh	MANHVHFSVNFHQINEQARAKLQELFSRIRTDNDYSWFSDIFVDGEELTYEESEQYSWTTEHIGPKWCYFEDYSAAENDVCFNGESAWSPPEQGLVKLLEILEQ
Ga0255772_104311323	3300023176	Salt Marsh	MANHVHFSVNFHRINDAAKGKLKEMFGRIREDGNYRWFSDMFVEGDTTYEMVEKYDWTCEHIGPKWSYFEDYDAEGEPYFNGE
Ga0255768_105991371	3300023180	Salt Marsh	MANHVHYSVNFHQINEQARAKLQELFSRVRTDGNYQWFSDIFVDGDELTYEQTEQYSWTLENIGPKWCYFEDYSAAEGDVYFNGEAA
Ga0233399_10553553	3300024231	Seawater	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEDTEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGESAWSSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEEMFDGVEYDYEE
(restricted) Ga0233440_11348253	3300024258	Seawater	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTVNIGPKWSYFEDYSAEEGD
Ga0228623_10483121	3300024267	Seawater	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGEAAWTSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEELFDGIEYDYEETIDLVINDSEQLTEESYNTETEEWVDQVAEDTFNEEMWEVINNTQAS
Ga0228610_10371781	3300024281	Seawater	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLKYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGESAWSSPQQGLEMLLGILVEYDPK
Ga0228664_10930223	3300024294	Seawater	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGESA
Ga0228629_11274872	3300024296	Seawater	KEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGESAWSSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEELFDGIEYDYEETIDLVINDSEQLTEES
Ga0228672_11596162	3300024335	Seawater	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGESAWSSPQQGLEMLLGI
Ga0244777_106362911	3300024343	Estuarine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTVNIGPKWSYFEDYSAEEGDVYFSGESAWCAPTDGLQKLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEEMFDGVEYDYEETIDLVIKDSERLTEESYVDEEW
Ga0228628_10106481	3300024359	Seawater	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEDTEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGESAWSSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEEMFDGV
Ga0209136_10611531	3300025636	Marine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTVNIGPKWSYFEDYSAEEGDVYFSGESAWCA
Ga0209653_10958691	3300025695	Marine	MANHVHYAVNFHQINDAAKAKLQEMFSRIREDTNYRWLSDIFVEGDLTYEETEKYAWTTEHIGPKWSYIEDYEVDTDEPYFNGEAAWSAPEMGLVKLLEILEEYD
Ga0209771_10892621	3300025701	Marine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFTGESAWSSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEELFDGIEYDYEETIDLVINDSEQLTEESYN
Ga0209137_12436792	3300025767	Marine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTVNIGPKWSYFEDYSAEEGDVYFSGESAWCAPTDGLQKLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEELFDGIEYDYEETIDLVINDSEQL
Ga0209666_12560071	3300025870	Marine	MANHVHFSVNFHRINDNAKAKLKEMFGRIREDAPHNWFSDIFVEGDTTYEMTEKYEWTTANIGPKWSYFEDYDAEDSEPYFNGEAAWGPPTQGVVKLLEILKEYDSKII
Ga0209961_10325141	3300026130	Water	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHKWFSDIFVEGDTTYEMTEKYEWTTSHIGPKWSYFEDYDTEGEPYFNGEAAWGPPTQGVVKLLE
Ga0209951_10615943	3300026138	Pond Water	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHNWFSDIFVEGDTTYEMTEKYEWTTSHIGPKWSYFEDYDAEGEPYFNGEAAWGPPTQGVTKLLGILKEYDPKIIATMTYED
Ga0209929_10221648	3300026187	Pond Water	MANHVHFSVTFHRINDDAKAKLKEMFGRIREDAPHNWFSDIFVEGDTTYEMTEKYEWTTSHIGPKWSYFEDYDAEGEPYFNGEAAWGPPTQGVVKLLKI
Ga0208674_10590461	3300027190	Estuarine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFSGESAWTSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFF
Ga0208310_10641291	3300027250	Estuarine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFTGESAWSSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEE
Ga0208437_10156211	3300027525	Estuarine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFTGESAWSSPQQGLEMLLGILVEYDPKIITSIS
Ga0208437_11498491	3300027525	Estuarine	MANHVHFAVNFHRINDDAKAKLKEMFGRIREDAPHQWFSDMFVEGDTTYEMTEKYEWTCEHIGPKWSYFEDFDAEDEPYFNGEA
Ga0209192_103640161	3300027752	Marine	MANHVHFYVQFHQINDDARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYQWTTTNIGPKWSYFEDCSAEEDDVYFSGESAWSSPEQGLEKLLGILVEYDPKIITSISYEDEGPNFFGADIYEGEEMYDGIEHDYEETIALVINDSELLTEESYV
Ga0209711_103402991	3300027788	Marine	MANHVHFYVQFHQINDDARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYQWTTTNIGPKWSYFEDFSDE
Ga0209090_105126021	3300027813	Marine	MANHVHFAVAFHQINDEARIKLKSMFERVREDSPHDWFSDIFVEGDLTYEETEKYEWTTANIGPKWCYFEDRLADENDVYFTGESAWCAPTEGLQKLLGILVEYDPKIITSIC
Ga0257126_10255581	3300028287	Marine	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFTGESAWSSPQQGLEMLLGILVEYDPKIITSISYEDEGPNFFGADIYDGEEMFDGV
Ga0228627_11198271	3300028414	Seawater	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVYFNGEAAWTSPQ
Ga0308024_10003269	3300031140	Marine	MANHVHFYVQFHQINDDARTKLKEMFGRIREDAPHKWFSDIFVEDDLTYEETEKYEWTTNNIGPKWSYFEDYSVEEGDVYFVGESAWSAPAQGLQKLLGILVEYDPKIITSIMYEDEAPNFFGADIYEGDDMSDWIEYVSEEIIHLVINESEQLTEESYVDDEWVDEAADVFDEEVWETINNTQAGLVGEWLEAIKSDQEEQIKNENL
Ga0307490_10131823	3300031253	Sea-Ice Brine	MANHVHFAVAFHQINDEARIKLKSMFERVREDSPHDWFSDIFVEGDLTYEETEKYEWTTANIGPKWCYFEDRVTDE
Ga0307488_101103171	3300031519	Sackhole Brine	MANHVHFAVAFHQINDEARIKLKSMFERVREDSPHDWFSDIFVEGDLTYEETEKYEWTTANIGPKWCYFEDRVTDENDVYFTG
Ga0307999_11071561	3300031608	Marine	MANHVHFYVQFHQINDDARTKLKEMFGRIREDAPHKWFSDIFVEDDLTYEETEKYEWTTNNIGPKWSYFEDYSVEEGDVYFVGESAWSAPAQGLQKLLGILVEYDPKIITSIMYEDEAPNFFGADIYEGDDMSDWIEYVSEEIIHLVINESEQLTEESYVDDEWVDEAADVFDE
Ga0308013_102091682	3300031721	Marine	MANHVHFAVAFHQINDEARIKLKSMFERVREDSPHDWFSDIFVEGDLTYEETEKYEWTTANIGPKWCYFEDRLADENDVYFTGESAWCAPTEGLQKLLGILVEYDPKIITSICYEDEGPNFFGVEIYDGEEMYDGSEYSYEETIDLVIKDSERLTEDSYNTETEE
Ga0315320_1001171015	3300031851	Seawater	MANHVHFYVQFHQINDEARTKLKEMFGRIREDAPHKWFSDIFVEGDLTYEETEKYEWTTANIGPKWSYFEDYSAEEGDVY

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082521

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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