NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F082645

Metagenome / Metatranscriptome Family F082645

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F082645
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 67 residues
Representative Sequence AAFETVAKAARSHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLS
Number of Associated Samples 102
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 9.73 %
% of genes near scaffold ends (potentially truncated) 84.96 %
% of genes from short scaffolds (< 2000 bps) 88.50 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (90.265 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(23.009 % of family members)
Environment Ontology (ENVO) Unclassified
(24.779 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.018 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.98%    β-sheet: 0.00%    Coil/Unstructured: 67.02%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF01127Sdh_cyt 9.73
PF00583Acetyltransf_1 7.08
PF01628HrcA 5.31
PF13673Acetyltransf_10 3.54
PF01025GrpE 2.65
PF00072Response_reg 1.77
PF01243Putative_PNPOx 1.77
PF01339CheB_methylest 1.77
PF028262-Hacid_dh_C 1.77
PF02776TPP_enzyme_N 1.77
PF01370Epimerase 1.77
PF02604PhdYeFM_antitox 0.88
PF00491Arginase 0.88
PF01575MaoC_dehydratas 0.88
PF08837DUF1810 0.88
PF09346SMI1_KNR4 0.88
PF01322Cytochrom_C_2 0.88
PF03595SLAC1 0.88
PF03241HpaB 0.88
PF00313CSD 0.88
PF03328HpcH_HpaI 0.88
PF12900Pyridox_ox_2 0.88
PF07676PD40 0.88
PF02317Octopine_DH 0.88
PF05958tRNA_U5-meth_tr 0.88
PF10017Methyltransf_33 0.88
PF13374TPR_10 0.88
PF07690MFS_1 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG2009Succinate dehydrogenase/fumarate reductase, cytochrome b subunitEnergy production and conversion [C] 9.73
COG2142Succinate dehydrogenase, hydrophobic anchor subunitEnergy production and conversion [C] 9.73
COG1420Transcriptional regulator of heat shock responseTranscription [K] 5.31
COG2201Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domainsSignal transduction mechanisms [T] 3.54
COG0576Molecular chaperone GrpE (heat shock protein HSP-70)Posttranslational modification, protein turnover, chaperones [O] 2.65
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.88
COG2265tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD familyTranslation, ribosomal structure and biogenesis [J] 0.88
COG2301Citrate lyase beta subunitCarbohydrate transport and metabolism [G] 0.88
COG2368Aromatic ring hydroxylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.88
COG38362-keto-3-deoxy-L-rhamnonate aldolase RhmACarbohydrate transport and metabolism [G] 0.88
COG3909Cytochrome c556Energy production and conversion [C] 0.88
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.88
COG5579Uncharacterized conserved protein, DUF1810 familyFunction unknown [S] 0.88
COG0010Arginase/agmatinase family enzymeAmino acid transport and metabolism [E] 0.88
COG0469Pyruvate kinaseCarbohydrate transport and metabolism [G] 0.88
COG1275Tellurite resistance protein TehA and related permeasesDefense mechanisms [V] 0.88

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.27 %
UnclassifiedrootN/A9.73 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005166|Ga0066674_10320099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales729Open in IMG/M
3300005332|Ga0066388_101986448All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1042Open in IMG/M
3300005435|Ga0070714_101895682All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300005451|Ga0066681_10077871All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1864Open in IMG/M
3300005518|Ga0070699_100827759All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium847Open in IMG/M
3300005563|Ga0068855_102306833All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria538Open in IMG/M
3300005566|Ga0066693_10480368All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales512Open in IMG/M
3300006028|Ga0070717_10007795All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00887969Open in IMG/M
3300006581|Ga0074048_12467056All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300006804|Ga0079221_10223807All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1049Open in IMG/M
3300006904|Ga0075424_101808521All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium646Open in IMG/M
3300006914|Ga0075436_101476922All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria516Open in IMG/M
3300007004|Ga0079218_11778822All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300009029|Ga0066793_10318855All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria897Open in IMG/M
3300009038|Ga0099829_11013015All Organisms → cellular organisms → Bacteria → Proteobacteria689Open in IMG/M
3300009510|Ga0116230_10228313All Organisms → cellular organisms → Bacteria → Proteobacteria1502Open in IMG/M
3300009792|Ga0126374_11434194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium564Open in IMG/M
3300010048|Ga0126373_10732979All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1048Open in IMG/M
3300010301|Ga0134070_10475201All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria504Open in IMG/M
3300010321|Ga0134067_10293132All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria625Open in IMG/M
3300010323|Ga0134086_10368052All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales572Open in IMG/M
3300010337|Ga0134062_10283233All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales780Open in IMG/M
3300010359|Ga0126376_11236993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria763Open in IMG/M
3300010360|Ga0126372_12380791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria580Open in IMG/M
3300010360|Ga0126372_13075652All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria518Open in IMG/M
3300010366|Ga0126379_11623050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria752Open in IMG/M
3300010366|Ga0126379_11752268All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria725Open in IMG/M
3300010376|Ga0126381_101316061All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300010376|Ga0126381_103864608All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria585Open in IMG/M
3300012199|Ga0137383_10984768All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales615Open in IMG/M
3300012201|Ga0137365_11115586All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium567Open in IMG/M
3300012203|Ga0137399_10727003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales836Open in IMG/M
3300012206|Ga0137380_10352747All Organisms → cellular organisms → Bacteria1312Open in IMG/M
3300012207|Ga0137381_11333284Not Available610Open in IMG/M
3300012209|Ga0137379_10116388All Organisms → cellular organisms → Bacteria2571Open in IMG/M
3300012357|Ga0137384_11380516All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium552Open in IMG/M
3300012361|Ga0137360_11419852All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium597Open in IMG/M
3300012363|Ga0137390_10159384All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2243Open in IMG/M
3300012363|Ga0137390_10764542All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria925Open in IMG/M
3300012582|Ga0137358_10218196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1300Open in IMG/M
3300012582|Ga0137358_11083554All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844512Open in IMG/M
3300012917|Ga0137395_10523908All Organisms → cellular organisms → Bacteria → Proteobacteria854Open in IMG/M
3300012927|Ga0137416_10362425All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1219Open in IMG/M
3300014501|Ga0182024_11020502Not Available985Open in IMG/M
3300016294|Ga0182041_12333307All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300016341|Ga0182035_11152433All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium691Open in IMG/M
3300016371|Ga0182034_10052159All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2708Open in IMG/M
3300016404|Ga0182037_10037634All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium3135Open in IMG/M
3300016404|Ga0182037_11639286All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300017933|Ga0187801_10116722All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1022Open in IMG/M
3300017943|Ga0187819_10087302All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1862Open in IMG/M
3300017955|Ga0187817_10141077All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1530Open in IMG/M
3300017959|Ga0187779_11033307All Organisms → cellular organisms → Bacteria → Proteobacteria571Open in IMG/M
3300017972|Ga0187781_10891298All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria648Open in IMG/M
3300017995|Ga0187816_10078310All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1406Open in IMG/M
3300018033|Ga0187867_10553332All Organisms → cellular organisms → Bacteria → Proteobacteria631Open in IMG/M
3300018431|Ga0066655_10960548All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria588Open in IMG/M
3300020579|Ga0210407_10050640All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3101Open in IMG/M
3300020583|Ga0210401_10361187Not Available1314Open in IMG/M
3300021180|Ga0210396_10663506Not Available903Open in IMG/M
3300021362|Ga0213882_10260557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria720Open in IMG/M
3300021377|Ga0213874_10296243All Organisms → cellular organisms → Bacteria → Proteobacteria608Open in IMG/M
3300021404|Ga0210389_11284905All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae561Open in IMG/M
3300021432|Ga0210384_11844131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium510Open in IMG/M
3300021474|Ga0210390_11643384All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae505Open in IMG/M
3300021476|Ga0187846_10002646All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00889693Open in IMG/M
3300021478|Ga0210402_10319752All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1438Open in IMG/M
3300021478|Ga0210402_11075526All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300021560|Ga0126371_11033790All Organisms → cellular organisms → Bacteria → Proteobacteria962Open in IMG/M
3300021560|Ga0126371_11091565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria937Open in IMG/M
3300025898|Ga0207692_10734682Not Available642Open in IMG/M
3300025915|Ga0207693_10118537All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2078Open in IMG/M
3300025939|Ga0207665_10786410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales751Open in IMG/M
3300026551|Ga0209648_10773386All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium524Open in IMG/M
3300027783|Ga0209448_10212251Not Available641Open in IMG/M
3300027882|Ga0209590_10167846All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1371Open in IMG/M
3300027884|Ga0209275_10934654All Organisms → cellular organisms → Bacteria → Proteobacteria500Open in IMG/M
3300028536|Ga0137415_10479421All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1051Open in IMG/M
3300028906|Ga0308309_10888562All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales773Open in IMG/M
3300029945|Ga0311330_10700755All Organisms → cellular organisms → Bacteria → Proteobacteria780Open in IMG/M
3300029954|Ga0311331_10273572All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila1828Open in IMG/M
3300030580|Ga0311355_11087993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria712Open in IMG/M
3300031474|Ga0170818_103781118Not Available775Open in IMG/M
3300031545|Ga0318541_10630289Not Available599Open in IMG/M
3300031573|Ga0310915_10749433All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium stylosanthis688Open in IMG/M
3300031595|Ga0265313_10199798All Organisms → cellular organisms → Bacteria → Proteobacteria832Open in IMG/M
3300031640|Ga0318555_10318649All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium842Open in IMG/M
3300031672|Ga0307373_10035448All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5657Open in IMG/M
3300031679|Ga0318561_10785821All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300031680|Ga0318574_10920364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium512Open in IMG/M
3300031754|Ga0307475_10977685All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium666Open in IMG/M
3300031763|Ga0318537_10310911All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium583Open in IMG/M
3300031821|Ga0318567_10283995All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria932Open in IMG/M
3300031823|Ga0307478_10056714All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2921Open in IMG/M
3300031845|Ga0318511_10112826All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1165Open in IMG/M
3300031846|Ga0318512_10502177All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium615Open in IMG/M
3300031846|Ga0318512_10549841Not Available587Open in IMG/M
3300031890|Ga0306925_11276512All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium731Open in IMG/M
3300031912|Ga0306921_10235858All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2143Open in IMG/M
3300031942|Ga0310916_10122870All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2114Open in IMG/M
3300031946|Ga0310910_10313143All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300031946|Ga0310910_10609085All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium866Open in IMG/M
3300031954|Ga0306926_11095848All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium942Open in IMG/M
3300031954|Ga0306926_12760168All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium532Open in IMG/M
3300031962|Ga0307479_11639048All Organisms → cellular organisms → Bacteria → Proteobacteria598Open in IMG/M
3300032042|Ga0318545_10001284All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6334Open in IMG/M
3300032055|Ga0318575_10317196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium789Open in IMG/M
3300032065|Ga0318513_10515235Not Available585Open in IMG/M
3300032068|Ga0318553_10368301All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium752Open in IMG/M
3300032261|Ga0306920_101810006All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium861Open in IMG/M
3300032805|Ga0335078_11339871Not Available814Open in IMG/M
3300032892|Ga0335081_10654944All Organisms → cellular organisms → Bacteria → Proteobacteria1284Open in IMG/M
3300033289|Ga0310914_11506219All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. STM 4661576Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil23.01%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil15.04%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.42%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.54%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.65%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.65%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.77%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.77%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.77%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.77%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.77%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.89%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.89%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.89%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.89%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.89%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.89%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.89%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.89%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.89%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009510Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021362Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09EnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029945I_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029954I_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031595Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaGHost-AssociatedOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031672Soil microbial communities from Risofladan, Vaasa, Finland - OX-2EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066674_1032009913300005166SoilVAKAARSHGKSMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLS*
Ga0066388_10198644813300005332Tropical Forest SoilFETVAKAARSHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLT*
Ga0070714_10189568223300005435Agricultural SoilQDERMRAAFETVAKAARSHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLG*
Ga0066681_1007787143300005451SoilAAFETVAKAARSHGKSMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLS*
Ga0070699_10082775923300005518Corn, Switchgrass And Miscanthus RhizosphereREAYEATAKAARAHGKWMGVGGVREDLEFQTWLLQLGVRYLTGGSDVGYILSAGRADVKRIREVRLI*
Ga0068855_10230683313300005563Corn RhizosphereARAAKANGKSMGVGGVREDLEFQSWLLQLGVRYLTGGSDVGYILSAGRRDVKQLRGVAL*
Ga0066693_1048036813300005566SoilIPGQYQHERMRAAFEAVAKAARGHDKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLD*
Ga0070717_1000779513300006028Corn, Switchgrass And Miscanthus RhizosphereATAKAARAHGKWMGVGGVREDLEFQTWLLQLGVRYLTGGSDVGYILSAGRADVKRIREVRLI*
Ga0074048_1246705633300006581SoilARAARAHDKWMGVGGVREDLEFQTWLLQLGMRYLTGGSDVGYILSAGRADVNRLREGKLS
Ga0079221_1022380733300006804Agricultural SoilAAFETVAKAARSHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLS*
Ga0075424_10180852123300006904Populus RhizosphereEAYEATAKAARAHGKWMGVGGVREDLEFQAWLVQLGMRYLTGGSDVGYILSAGRADVRRVRELPLG*
Ga0075436_10147692213300006914Populus RhizospherePGQYTHEHMRAAFETVAKAARGHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLD*
Ga0079218_1177882213300007004Agricultural SoilFETVAKAAGAHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELEL*
Ga0066793_1031885523300009029Prmafrost SoilAYEATAKAARRHGKWMGVGGVREDLEFQTWLVQLGVRYLTGGSDTGYILSAGRADVQRLRNVPLT*
Ga0099829_1101301523300009038Vadose Zone SoilAAFETVAKAARSHGKSFGVGGVRQDFEFQSWLISIGMRYLTGGSDVGYILSAGRADVKQLRELKL*
Ga0116230_1022831333300009510Host-AssociatedDRMRAAYETIASAAKKHGKSMGVGGVRQDVGFQSWLLKLGVRYLTSGSDTLYILSGGRADVKQIREVAAAAFAGTP*
Ga0126374_1143419413300009792Tropical Forest SoilETVARAAKGHGKAMGVGRVRQDFEFQTWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELTL*
Ga0126373_1073297933300010048Tropical Forest SoilAFESVARAAKSHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL*
Ga0134070_1047520113300010301Grasslands SoilVAKAARSHGKSFGVGGVRQDFQFQSWLISIGMRYLTGGSDVGYILSAGRADVKQLRELKLPG*
Ga0134067_1029313213300010321Grasslands SoilERMRAAFETVAKAARSHGKSMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLS*
Ga0134086_1036805213300010323Grasslands SoilPGQYTHDRMKAAFETVAKAARSHGKSFGVGGVRQDFQFQSWLISIGMRYLTGGSDVGYILSAGRADVKQLRELKLS*
Ga0134062_1028323313300010337Grasslands SoilETVAKAARSHGKSMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLS*
Ga0126376_1123699313300010359Tropical Forest SoilMRAAFERVAKAARDQGKAMGVGGVRQDFQFQSWLISIGMRYLTGGSDVGYILSAGRADVKQLRELRL*
Ga0126372_1238079113300010360Tropical Forest SoilGRMRAAFETVARAAKGHGKAMGVGGVRQDFEFQTWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELTL*
Ga0126372_1307565223300010360Tropical Forest SoilRAAFETVARAAKGHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELRL*
Ga0126379_1162305013300010366Tropical Forest SoilRAAFETVARAAKGHSKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL*
Ga0126379_1175226823300010366Tropical Forest SoilPGQYTHERMRAAFETVARAAKGHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYIPSAGRADVKQLRELRL*
Ga0126381_10131606123300010376Tropical Forest SoilARAAQAHGKAMGVGGVREDLEFQSWLFEIGVRYLTGGSDVGYILSAGRADVERLRKVRLGPR*
Ga0126381_10386460823300010376Tropical Forest SoilAARKHGKAFGVGGVRQDFESQSWLISIGMRYLTGGSDVGYILSAGRADVKQLRELKLP*
Ga0137383_1098476823300012199Vadose Zone SoilHERMKAAFETVARAARSHGKSFGVGGVRQDFQFQSWLISIGMRYLTGGSDVGYILSAGRADVKQLRELKLA*
Ga0137365_1111558623300012201Vadose Zone SoilAKAARSHGKSFGVGGVREDLEFQTWLMELGMRYLTGGSDVGYILSAGRADVKRIREVRLS
Ga0137399_1072700333300012203Vadose Zone SoilAKAARSHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLT
Ga0137380_1035274723300012206Vadose Zone SoilMLRANHPTRREDPAMPTQIGENLAKNAKAARGHGKSFGVGGVRQDFQFQSWLISIGMRYLTGGSDVGYILSAGRADVKQLRELKLPG*
Ga0137381_1133328423300012207Vadose Zone SoilFEKVGKAARANGKSFGVGGVRQDFEFQSWLIGVGMRYLTGGSDVGYILSAGRADVKQLRELKLPG*
Ga0137379_1011638853300012209Vadose Zone SoilMPTQIGENLAKNAKAARGHGKSFGVGGVRQDFQFQSWLISIGMRYLTGGSDVGYILSAGRADVKQLRELKLPG*
Ga0137384_1138051623300012357Vadose Zone SoilGQYKHARMREAYEVTAKAARSHGKSFGVGGVREDLEFQTWLMELGMRYLTGGSDVGYILSAGRADVKRIREVRLS*
Ga0137360_1141985213300012361Vadose Zone SoilKAARSHRKSFGVGGVRENLEFQAWLLQIGMRYLTGGSDVGYILSAGRADVKRIRAVPLRSG*
Ga0137390_1015938443300012363Vadose Zone SoilQAYEATAKAARAHGKWMGVGGVREDLEFQTWLLQLGMRYLTGGSDVGYILSAGRADVKRLRAAPLS*
Ga0137390_1076454213300012363Vadose Zone SoilARNHGKSFGVGGVRQDFAFQSWLIGIGMRYLTGGSDVGYILSAGRADVKQLRELKLPG*
Ga0137358_1021819643300012582Vadose Zone SoilPGQYQHERMRAAFEAVARAARGHGKAMGVGVVRQDFEFQSWLLKLGVRYLTGGSDVGYILSAGRADVKQLRELKLT*
Ga0137358_1108355413300012582Vadose Zone SoilYTHERMRAAFETVARAAKGHRKGLGVGGVRQDFEFQSWLLRLGVRYLTGGPDVGYILSAGRADVKQLRELKL*
Ga0137395_1052390813300012917Vadose Zone SoilAAFETVAKAARSHGKSFGVGGVRQNFEFQSWLFGIGMRYLTGGSDIAYILSAGRADVKQLRELKLPG*
Ga0137416_1036242513300012927Vadose Zone SoilYKHARMREAYEVTAKAARSHGKSFGVGGVREDLEFQTWLMELGMRYLTGGSDVGYILSAGRADVKRIREVRLS*
Ga0182024_1102050213300014501PermafrostAAAAKHHGKAMGVGGVREDLAFQTWLVQLGVRYLTSGSDVGYILSAGRADVRQQRAIPLKSA*
Ga0182041_1233330713300016294SoilQADEATAKVARAHGKSMGVGGVREDFEFQSWPMQLGMRYLTGGSDVAYILSAGRADVKRLREVRLS
Ga0182035_1115243323300016341SoilVARAAKSHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0182034_1005215913300016371SoilMRQAYEATARAARTHGKSTGVGRVREDLEFQSWPMQLGMRYLTGGSDVAYILSAGRADVKRLREVRLS
Ga0182037_1003763413300016404SoilEATARAARAHGKSMGVGGVREDLEFQTWLLQLGMRYLTGGSDVGYILSAGRADVKKLREVRLS
Ga0182037_1163928613300016404SoilMRAAFETVARAAKGHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0187801_1011672223300017933Freshwater SedimentMPNSVGKHARMRQAHEATARAARAHGKWMGVGGVREDLEFQSWLLQLGMRYLTGGSDVGYILSAGRADVKWLREVPLS
Ga0187819_1008730213300017943Freshwater SedimentMPNSVEKHARMRQAHEATARAARAHGKWMGVGGVREDLEFQSWLLQLGMRYLTGGSDVGYILSAGRADVKRSREVPLS
Ga0187817_1014107733300017955Freshwater SedimentMPNSVGKHARMRQAHEATARASRTHGKWMGVGGVREDLEFQSWLLQLGMRDLTGGSDVGYILSAGRADVKRLREVPLS
Ga0187779_1103330713300017959Tropical PeatlandMRAAFEKVAGAARRHGKQMGVGGVRQDFEVQSWLIELGMRDLTGGSDIAYILSAGRADVKQLRGLKIA
Ga0187781_1089129823300017972Tropical PeatlandYTHERMRAAFESVARAAKSHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0187816_1007831013300017995Freshwater SedimentMRNSVGKHARMRQAHEATARASRTHGKWMGVGGVREDLEFQSWLLQLGMRYLTGGSDVGYILSAGRADVKWLREVPLS
Ga0187867_1055333213300018033PeatlandRMRDAYETIAKAAKAHGKSMGVGGVRQDVAFQSWLLKLGVRYLTSGSDTLYILSGGRADVKQIREVAAGASAGTP
Ga0066655_1096054823300018431Grasslands SoilMCVSMRAAYKTVAVAERKHGKAFGVGGVRQDFEFQSWLIQIGMRYLTGGSDVGYILSAGRADVKQLRELKPG
Ga0210407_1005064013300020579SoilRAAFETVARAAKGHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0210401_1036118723300020583SoilDRAAKGHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0210396_1066350633300021180SoilSHDDGTRAAKGHGKATGGGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVK
Ga0213882_1026055713300021362Exposed RockETVAKAARSHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLS
Ga0213874_1029624313300021377Plant RootsGQYTHERMRAAFETVAKAARGHGKAMGVGGVRQDFEFQTWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELNL
Ga0210389_1128490523300021404SoilHQRMREAFETVASAAKAHGKAMGVGGVRQDVQFQTWLLELGVRYLTSGSDTLYILSGGRADVMQIRGVAANALSGTA
Ga0210384_1184413113300021432SoilMRKAHEATAKAARAHRKSMGVGGVREDFEFQTWLMQLGMRYLTGGSDVGYVLSAGRADVKRLREVQLS
Ga0210390_1164338423300021474SoilDYQHQRMREAFETVASAAKAHGKAMGVGGVRQDVQFQTWLLELGVRYLTSGSDTLYILSGGRADVMQIRGVAANALSGTA
Ga0187846_1000264683300021476BiofilmMPNSVGEDQATARAARAYGKSMGVGGVREDLEFQTWLLQLGMRYLTGGSDVGYILSAGRADVKRLREIGLS
Ga0210402_1031975233300021478SoilMRAAFETVARAAKGHGKAMGVGGVRQDFEFQSWLFRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0210402_1107552613300021478SoilMRAAFETVAGAAKGHGKGMGVGGVRQDFEFQSWLLRLGVRYLTGCSNVGYILSAGRADVKQLRELKL
Ga0126371_1103379023300021560Tropical Forest SoilFETVARAAKGHGKAMGVGGVRQDFEFQTWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0126371_1109156523300021560Tropical Forest SoilVARVAKGHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRDLKL
Ga0207692_1073468223300025898Corn, Switchgrass And Miscanthus RhizosphereKAARSRGKAMGVGGVRHDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKLS
Ga0207693_1011853733300025915Corn, Switchgrass And Miscanthus RhizosphereTHQRMRAAFETVAGAAKGHGKAMGVGGVGQDFEFQSWLFRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0207665_1078641023300025939Corn, Switchgrass And Miscanthus RhizosphereMRAAFETVARAAKGHGKAMGVGGVRQDFEFQGWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0209648_1077338613300026551Grasslands SoilKHARMREAYEVTAKAARSHGKSFGVGGVREDLEFQTWLMELGMHYLTGGSDVGYILSAGRADVKRIREVRLS
Ga0209448_1021225133300027783Bog Forest SoilPGQYTHERMRAAFETVARAARGHGKAMGVGGVRQDFEYQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0209590_1016784613300027882Vadose Zone SoilMKAAFETVAKAARSHGKSFGVGGVRQDFQFQSWLISIGMRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0209275_1093465413300027884SoilYEATAAAAKKYGKSMGVGGVREDVAFQTWLVQLGVRYLTSGSDVGYILSAGRADVRQQRAIPLTPA
Ga0137415_1047942123300028536Vadose Zone SoilYKHARMREAYEVTAKAARSHGKSFGVGGVREDLEFQTWLMELGMRYLTGGSDVGYILSAGRADVKRIREVRLS
Ga0308309_1088856213300028906SoilGQYTHERMRAAFETVARAAKGHGKGMGVGGVRQDFEFQSWLLRLGVRYLTGCSNVGYILSAGRADVKQLRELKL
Ga0311330_1070075523300029945BogDRMRDAYETIARAAKAHGKSMGVGGVRQDVAFQSWLLKLGVRYLTSGSDTLYILSGGLADVKQIREVAAGVSAGTP
Ga0311331_1027357233300029954BogDAYETIARAAKAHGKSMGVGGVRQDVAFQSWLLKLGVRYLTSGSDTLYILSGGLADVKQIREVAAGVSAGTP
Ga0311355_1108799333300030580PalsaKVAGAARRHGKAMGVGGVRQDFEFQSWLIKLGMRYLTGGSDIAYILAAGRADVKQLRELKID
Ga0170818_10378111823300031474Forest SoilMRAAFETVARAAKDHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILTAGRADVKQLRELNL
Ga0318541_1063028923300031545SoilARVAKGHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRDLKL
Ga0310915_1074943313300031573SoilRAAKNHDKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0265313_1019979813300031595RhizosphereMPTQIRENHAKRMRAAFEKVAGAARRHGEQMRVGGVRQDFEFQSWLIKLGMRYLTGGSDIAYILSAGRADVRQLRELKLD
Ga0318555_1031864913300031640SoilYEATTKAARAHGKSIGVGGVSEDSEFQTRLMQLGMRYLTGGSDVRYILSAGRADVKRLREVPFS
Ga0307373_1003544813300031672SoilAKAARSHGKAMGVGGVRQDFEFQSWLIKLGMRYLTGGSDIAYILSAGRADVKQLRELKVD
Ga0318561_1078582123300031679SoilMREAYEATAKAARAHGKSMGVGGVREDLEFQIWLMQLGMRYLTGGLDVGYTLSAGRADVRRLRKVRLS
Ga0318574_1092036423300031680SoilQAYEATARAARTHGKSTGVGRVREDLEFQSWPMQLGMRYLTGGSDVAYILSAGRADVKRLREVRLS
Ga0307475_1097768523300031754Hardwood Forest SoilYEATARAARTHGKSMGVGGVREDLEFQTWLMQLGMRYLTGGSDVGYILSAGRADVKRLREVRLS
Ga0318537_1031091113300031763SoilQYKHVRMREAYEATTKAARAHGKSIGVGGVSEDSEFQTRLMQLGMRYLTGGSDVGYVLGAGRADVRRLREVRLS
Ga0318567_1028399513300031821SoilAAFETVARAAKGHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRDLKL
Ga0307478_1005671443300031823Hardwood Forest SoilPGQYTHERMRAAFETVAKAARGHGKAMGVGGVRQDFEFQSWLLKLGVRYLTGGSDVGYILSAGRADVKQLRELKLG
Ga0318511_1011282613300031845SoilYKHARMRQAYEATARAARAHGKSTGVGGVRVDLEFQTWLVQLGMRYLTGGSDVGYILSAGRADVKRLREVRLS
Ga0318512_1050217723300031846SoilMREAYEATAKAARSHGKSFGVGGVREDLEFQTWLLRLGMRYLTGGSDVGYILSAGRADVKRIREARLT
Ga0318512_1054984113300031846SoilFQTVARVAKGHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRDLKL
Ga0306925_1127651223300031890SoilARAAKGHGKAMGVGGVRQDFEFQTWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELTL
Ga0306921_1023585843300031912SoilYKHVRMREAYEATTKAARAHGKSIGVGGVSEDSEFQTRLMQLGMRYLTGGSDVGYVLSAGRADVRRLREVRLS
Ga0310916_1012287013300031942SoilHARMRQAYEATARAARTHGKSTGVGRVREDLEFQSWPMQLGMRYLTGGSDVAYILSAGRADVKRLREVRLS
Ga0310910_1031314313300031946SoilARAAKGHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0310910_1060908513300031946SoilGQYKHARMRQAYEATARAARTHGKSTGVGRVREDLEFQSWPMQLGMRYLTGGSDVAYILSAGRADVKRLREVRLS
Ga0306926_1109584813300031954SoilAARSHGKAFGVGGVRQDFEFQSWLISIGMRYLTGGSDVGYILSAGRADVKKLRELKLPG
Ga0306926_1276016813300031954SoilQHARMREAYEATAKAARSHAKSFGVGGVREDLEFQTWLLQLGMRYLTGGSDVGYILSAGRADVKRIREARLT
Ga0307479_1163904823300031962Hardwood Forest SoilIAGAARRHGKQMGVGGVRQDFEFQSWLIKLGMRYLTGGSDIAYILSAGRADVKQLRELKI
Ga0318545_1000128483300032042SoilFETVARAAKGHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL
Ga0318575_1031719613300032055SoilEITARAARAHGKSMGVGGVREDLEFQNWLMQLGMRYPTCGSDVGYILSAGRADVKRLRKVRLS
Ga0318513_1051523513300032065SoilHARMRQAYEATARAARAHGKSMGVGGVREDLEFQTWLLQLGMRYLTGGSDVGYILSAGRADVKKLREVRLS
Ga0318553_1036830123300032068SoilYQHARMRQAYEATARAARAHGKSMGVGGVREDLEFQTWLLQLGMRYLTGGSDVRYILSAGRADVKRLREVPFS
Ga0306920_10181000623300032261SoilEATAKAARSHGKSFGVGGVREDLEFQTWLLRLGMRYLTGGSDVGYILSAGRADVKRIREARLT
Ga0335078_1133987133300032805SoilAAFEATAAAAKRNGKAMGVGGVREDLPFQTFLAQLGVRYLTSGSDVGYILSAGRADVRQQRAIPLKPA
Ga0335081_1065494433300032892SoilAGAARRHGKQMGVGGVRQDFEFQSWLIELGMRYLTGGSDIAYILSAGRADVKQLRGLKIA
Ga0310914_1150621913300033289SoilAFETVARAAKSHGKAMGVGGVRQDFEFQSWLLRLGVRYLTGGSDVGYILSAGRADVKQLRELKL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.