Metagenome / Metatranscriptome Family F082750

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082750
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	75 residues
Representative Sequence	VPAGSDDVVIPKAGGLIVSDNAAVADATALSVTRTVKLLDPAVPGVPDIVPPAARLNPAGSDPLATDHVYGGDPPEAASACE
Number of Associated Samples	73
Number of Associated Scaffolds	82

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	48.67 %
% of genes near scaffold ends (potentially truncated)	37.17 %
% of genes from short scaffolds (< 2000 bps)	99.12 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.027 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil (8.850 % of family members)
Environment Ontology (ENVO)	Unclassified (27.434 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.248 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.64% β-sheet: 0.00% Coil/Unstructured: 96.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 82 Family Scaffolds
PF05345	He_PIG	6.10

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.03 %
All Organisms	root	All Organisms	30.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.03 %
cellular organisms	root	All Organisms → cellular organisms	30.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.03 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.20 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.03 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.42 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.77 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	1.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.03 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.62 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.08 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.42 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.03 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	6.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.54 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3.54 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.65 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	1.77 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.03 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	6.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	3.54 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	3.54 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1.77 %
Trebouxiophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae	1.77 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.88 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.03 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	6.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	3.54 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	3.54 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	1.77 %
Chlorellales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Chlorellales	1.77 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	0.88 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.03 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	6.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3.54 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	3.54 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	1.77 %
Chlorellaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Chlorellales → Chlorellaceae	1.77 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Pedococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.03 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	6.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	3.54 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	3.54 %
Ilumatobacter coccineus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter coccineus	1.77 %
Chlorella clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Chlorellales → Chlorellaceae → Chlorella clade	1.77 %
Pedococcus bigeumensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus bigeumensis	0.88 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.03 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	6.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	3.54 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	3.54 %
Chlorella	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Chlorellales → Chlorellaceae → Chlorella clade → Chlorella	1.77 %
Ilumatobacter coccineus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter coccineus	1.77 %
Pedococcus bigeumensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus bigeumensis	0.88 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.03 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	6.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	3.54 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	3.54 %
Chlorella variabilis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Chlorellales → Chlorellaceae → Chlorella clade → Chlorella → Chlorella variabilis	1.77 %
Ilumatobacter coccineus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter coccineus	1.77 %
Pedococcus bigeumensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus bigeumensis	0.88 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100709754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	590	Open in IMG/M
3300000559\|F14TC_100709754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	590	Open in IMG/M
3300002538\|JGI24132J36420_10185371	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Chlorellales → Chlorellaceae → Chlorella clade → Chlorella → Chlorella variabilis	516	Open in IMG/M
3300002538\|JGI24132J36420_10185371	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Chlorellales → Chlorellaceae → Chlorella clade → Chlorella → Chlorella variabilis	516	Open in IMG/M
3300002568\|C688J35102_118130679	Not Available	532	Open in IMG/M
3300005167\|Ga0066672_10746155	Not Available	622	Open in IMG/M
3300005167\|Ga0066672_10746155	Not Available	622	Open in IMG/M
3300005340\|Ga0070689_100993991	Not Available	746	Open in IMG/M
3300005340\|Ga0070689_100993991	Not Available	746	Open in IMG/M
3300005365\|Ga0070688_101756094	Not Available	509	Open in IMG/M
3300005365\|Ga0070688_101756094	Not Available	509	Open in IMG/M
3300005434\|Ga0070709_11323119	Not Available	582	Open in IMG/M
3300005434\|Ga0070709_11323119	Not Available	582	Open in IMG/M
3300005436\|Ga0070713_102302373	Not Available	521	Open in IMG/M
3300005535\|Ga0070684_100375663	Not Available	1309	Open in IMG/M
3300005535\|Ga0070684_100375663	Not Available	1309	Open in IMG/M
3300005535\|Ga0070684_101620149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	610	Open in IMG/M
3300005650\|Ga0075038_11415235	Not Available	998	Open in IMG/M
3300005841\|Ga0068863_102625398	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005947\|Ga0066794_10107961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter coccineus	833	Open in IMG/M
3300005947\|Ga0066794_10107961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter coccineus	833	Open in IMG/M
3300005947\|Ga0066794_10224215	Not Available	564	Open in IMG/M
3300005947\|Ga0066794_10224215	Not Available	564	Open in IMG/M
3300005952\|Ga0080026_10256152	Not Available	529	Open in IMG/M
3300005952\|Ga0080026_10256152	Not Available	529	Open in IMG/M
3300005993\|Ga0080027_10094721	Not Available	1115	Open in IMG/M
3300005993\|Ga0080027_10094721	Not Available	1115	Open in IMG/M
3300005994\|Ga0066789_10494613	Not Available	511	Open in IMG/M
3300005994\|Ga0066789_10494613	Not Available	511	Open in IMG/M
3300005995\|Ga0066790_10432187	Not Available	563	Open in IMG/M
3300006358\|Ga0068871_100847138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300006642\|Ga0075521_10475293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	611	Open in IMG/M
3300006642\|Ga0075521_10475293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	611	Open in IMG/M
3300006795\|Ga0075520_1319997	Not Available	635	Open in IMG/M
3300006797\|Ga0066659_11782650	Not Available	520	Open in IMG/M
3300009012\|Ga0066710_102986369	Not Available	659	Open in IMG/M
3300009012\|Ga0066710_102986369	Not Available	659	Open in IMG/M
3300009029\|Ga0066793_10735597	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	560	Open in IMG/M
3300009089\|Ga0099828_11803942	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300009176\|Ga0105242_11118360	Not Available	803	Open in IMG/M
3300009177\|Ga0105248_12303421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	613	Open in IMG/M
3300009545\|Ga0105237_11920443	Not Available	600	Open in IMG/M
3300009551\|Ga0105238_10562173	Not Available	1146	Open in IMG/M
3300009649\|Ga0105855_1010584	All Organisms → cellular organisms → Bacteria	2785	Open in IMG/M
3300010375\|Ga0105239_10871450	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1033	Open in IMG/M
3300010397\|Ga0134124_11014177	Not Available	843	Open in IMG/M
3300010399\|Ga0134127_11921349	Not Available	669	Open in IMG/M
3300010867\|Ga0126347_1523814	Not Available	530	Open in IMG/M
3300011119\|Ga0105246_10688839	Not Available	894	Open in IMG/M
3300012212\|Ga0150985_101808019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	845	Open in IMG/M
3300012212\|Ga0150985_101808019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	845	Open in IMG/M
3300012212\|Ga0150985_112082915	Not Available	673	Open in IMG/M
3300012212\|Ga0150985_112082915	Not Available	673	Open in IMG/M
3300012349\|Ga0137387_10935724	Not Available	625	Open in IMG/M
3300012349\|Ga0137387_10935724	Not Available	625	Open in IMG/M
3300012469\|Ga0150984_108051813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300012469\|Ga0150984_114534139	Not Available	647	Open in IMG/M
3300012469\|Ga0150984_114534139	Not Available	647	Open in IMG/M
3300012957\|Ga0164303_11558428	Not Available	502	Open in IMG/M
3300012989\|Ga0164305_11821487	Not Available	550	Open in IMG/M
3300013104\|Ga0157370_12007435	Not Available	519	Open in IMG/M
3300013104\|Ga0157370_12007435	Not Available	519	Open in IMG/M
3300013105\|Ga0157369_11894605	Not Available	605	Open in IMG/M
3300013296\|Ga0157374_12052504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	598	Open in IMG/M
3300013296\|Ga0157374_12143667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300013306\|Ga0163162_10339068	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1636	Open in IMG/M
3300013308\|Ga0157375_12106619	Not Available	671	Open in IMG/M
3300013308\|Ga0157375_13713979	Not Available	507	Open in IMG/M
3300014325\|Ga0163163_10416170	Not Available	1403	Open in IMG/M
3300014498\|Ga0182019_10860287	Not Available	652	Open in IMG/M
3300014498\|Ga0182019_10860287	Not Available	652	Open in IMG/M
3300014969\|Ga0157376_11380397	Not Available	736	Open in IMG/M
3300014969\|Ga0157376_12901958	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300015371\|Ga0132258_12213131	Not Available	1380	Open in IMG/M
3300018468\|Ga0066662_11839224	Not Available	634	Open in IMG/M
3300021082\|Ga0210380_10154168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	1031	Open in IMG/M
3300021082\|Ga0210380_10453555	Not Available	587	Open in IMG/M
3300021082\|Ga0210380_10453555	Not Available	587	Open in IMG/M
3300021082\|Ga0210380_10477841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	571	Open in IMG/M
3300021407\|Ga0210383_11076071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	680	Open in IMG/M
3300021407\|Ga0210383_11076071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	680	Open in IMG/M
3300021478\|Ga0210402_10264351	Not Available	1590	Open in IMG/M
3300021860\|Ga0213851_1314681	Not Available	679	Open in IMG/M
3300025481\|Ga0208079_1079887	Not Available	647	Open in IMG/M
3300025604\|Ga0207930_1144415	Not Available	514	Open in IMG/M
3300025865\|Ga0209226_10359160	Not Available	598	Open in IMG/M
3300025916\|Ga0207663_10559422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	895	Open in IMG/M
3300025920\|Ga0207649_11394184	Not Available	555	Open in IMG/M
3300025925\|Ga0207650_11342503	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300025928\|Ga0207700_11983497	Not Available	509	Open in IMG/M
3300025928\|Ga0207700_11983497	Not Available	509	Open in IMG/M
3300025934\|Ga0207686_10704778	Not Available	803	Open in IMG/M
3300025941\|Ga0207711_10796968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	880	Open in IMG/M
3300026088\|Ga0207641_11214691	Not Available	754	Open in IMG/M
3300026088\|Ga0207641_11214691	Not Available	754	Open in IMG/M
3300026294\|Ga0209839_10122814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300026294\|Ga0209839_10122814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300026294\|Ga0209839_10122814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300027986\|Ga0209168_10621080	Not Available	516	Open in IMG/M
3300028380\|Ga0268265_12581934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus bigeumensis	514	Open in IMG/M
3300031231\|Ga0170824_105454485	Not Available	664	Open in IMG/M
3300031231\|Ga0170824_105454485	Not Available	664	Open in IMG/M
3300031421\|Ga0308194_10199281	Not Available	647	Open in IMG/M
3300031421\|Ga0308194_10199281	Not Available	647	Open in IMG/M
3300031718\|Ga0307474_11048054	Not Available	645	Open in IMG/M
3300031754\|Ga0307475_10732489	Not Available	787	Open in IMG/M
3300031754\|Ga0307475_10732489	Not Available	787	Open in IMG/M
3300031939\|Ga0308174_11570270	Not Available	565	Open in IMG/M
3300031996\|Ga0308176_10852696	Not Available	955	Open in IMG/M
3300031996\|Ga0308176_10852696	Not Available	955	Open in IMG/M
3300031996\|Ga0308176_10852696	Not Available	955	Open in IMG/M
3300032174\|Ga0307470_10404788	Not Available	966	Open in IMG/M
3300034195\|Ga0370501_0338403	All Organisms → cellular organisms → Bacteria → Nitrospirae	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.91%
Host-Associated	Host-Associated	30.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.49%
Plants	Host-Associated → Plants	30.09%
Aquatic	Environmental → Aquatic	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.85%
Freshwater	Environmental → Aquatic → Freshwater	4.42%
Roots	Host-Associated → Plants → Roots	1.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.04%
Loam	Environmental → Terrestrial → Soil → Loam	14.16%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.42%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.77%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	16.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.42%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.54%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	8.85%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	7.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.31%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.54%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	3.54%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.54%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.77%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.77%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002538	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1007097541	3300000559	Soil	MPGGSDDVVMLKAGGLIVTDNAAAMETEARSVARTVKLLDPAAPGVPDIVPPAARLNPAGNDPLSRDQEYGGSPPEALSACE*
F14TC_1007097542	3300000559	Soil	MPVGSDDVVIRKAGRLIVSDSAAVMETDALSVTRTVKVLGPGVPVTPEIVPLGARLSPGGSNPLTSVHVYGGDPPEAASA*
JGI24132J36420_101853711	3300002538	Arctic Peat Soil	LIASESAAVAETDALSVTRTVKLLDPAVPGVPDIVPPAARLSPAGNDPLATDHEYGGDPPEAPSAC
JGI24132J36420_101853712	3300002538	Arctic Peat Soil	TPTVPAGSVDVVIPRAGGLIASESAAVAETDALSVTRTVKLLDPAVPGVPDIVPPAARLSPAGNDPLATDHEYGGDPPEAPSACE*
C688J35102_1181306791	3300002568	Soil	VVILNSGGLTASDSAAVVETDALSVTFTVKLLGPAVLGVPEIVPPADRFNPPGNDPTDTDHVYGGVPPDAASG*
Ga0066672_107461552	3300005167	Soil	MLKAGGLIVIDRGAVVDTDALSVTRTEKLLGPAVPGVPEIVPPGARVNPAGSDPADTVHEYGGDPPEAASACE*
Ga0066672_107461553	3300005167	Soil	PGGLMVIDRGAVVDTDALSVTRTVKLLGPAVPGDPDMVPPGVRVNPEGSDPADTVHEYGGDPPDAASACE*
Ga0070689_1009939912	3300005340	Switchgrass Rhizosphere	MAVVEFDARSVTRTVKLLDPAEPGVPDIIPPAARLNPAGKDPFTSDQVYGGSPPEAPIDCE*
Ga0070689_1009939913	3300005340	Switchgrass Rhizosphere	MLKVGGLIVSDSAVVVETDALSVTRTAKLLAPAVPGVPDIVPPAARLNPGGSDPLAIDHEYGGDPPAAPSVCE*
Ga0070688_1017560941	3300005365	Switchgrass Rhizosphere	MPTMPAGSEDVVTLKVGKLMVIDNAAVTETDALSVTRTAKSLGPGVPVTPEIVPPAARLNPGGSDPLATVHVYGGDPPEAASTCE*
Ga0070688_1017560942	3300005365	Switchgrass Rhizosphere	KTGGLIVIDNMAVVEFDARSVTRTVKLLDPAEPGVPDIIPPAARLNPAGKDPFTSDQVYGGSPPEAPTDCE*
Ga0070709_113231191	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VPTVPAGSDDVVMLNPGGLIVIDDAAVVEIEALSVTRTVKLLGPAVPGVPDIVPPAARDNPEGSDPADTVHEYGGDPPEAASACE*
Ga0070709_113231192	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VPTVPAGSDDVVILNPGGLIVIDKAAVVEIDALSVTRTVKLFGPAVPGVPVIVPPVARVNPEGSEPADTVHEYGGEPPEAASACE*
Ga0070713_1023023731	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VPTLPAGSDEVVIPKTGGLIVSDNPAVVETDALSATFTVKLGAPAVLGVPEIVPSGERFNPAGSDPLAIDHE*
Ga0070684_1003756632	3300005535	Corn Rhizosphere	MPTMPTGSEDVVTLKVGKLMVIDNAAVTETDALSVTRTAKSLGPGVPVTPEIVPPAARLNPGGNDPLATVHVYGGDPPEAASTCE*
Ga0070684_1003756633	3300005535	Corn Rhizosphere	VETDALSVTRTMKLLATGVPGVPDMVPPAARFNPAGSDPPDTNHEYGGEPPAAPSVCE*
Ga0070684_1016201493	3300005535	Corn Rhizosphere	VILSPGGLIVIDRAAVVDTEALSVTRTVKLLGPAVPGVPDIVPPAARVSPAGSDPADTVHVYGGEPPEAASACE*
Ga0075038_114152352	3300005650	Permafrost Soil	KGVAAGLMVSDSAAVTEATALSVTRTVKLLDPAVPGVPDIVPPGARFNPAGSNPLATVHTYGGDPPEAPSACE*
Ga0068863_1026253982	3300005841	Switchgrass Rhizosphere	MPAGSDDVVILKVGKLMVIDNAAVTETDALSVTRTAKSLGPGVPVTPEIVPPAARLNPGGNDPLATVHVYGGDPPEAASTCE*
Ga0066794_101079611	3300005947	Soil	MVSESAAVAEADALSVTRTVKLLDPAVPGVPDIVPPAARLSPAGNDPLATDHVYGGVPPEAPSACA*
Ga0066794_101079612	3300005947	Soil	MVSESAAVAEADALSVTRTVKLLDPAVPGVPDIVPPAARLSPAGSDPLATDHVYGGVPPEAPSACA*
Ga0066794_102242151	3300005947	Soil	MVSESAAVAETDALSVTRTVKLLDPAVPGVPDIVPPAARLSPAGNDPLATDHEYGGVPPEAPSACE*
Ga0066794_102242152	3300005947	Soil	MVSESAAVAEADALSVTRTVKLLDPAVPGVPDIVPPAARLSPAGNDPLATDHEYGGDPPEAPSACE*
Ga0080026_102561521	3300005952	Permafrost Soil	VPAGSDDVVIPKAGGLIVSDNAAVADATALSVTRTVKLLDPAVPGVPDIVPPAARLNPAGSDPLATDHVYGGDPPEAASACE*
Ga0080026_102561522	3300005952	Permafrost Soil	VPEASDDVVIPKAGGLIVSDNATVAEAAALSVTRTVKLLDPAAPGVPDIVPPAARLNPAGSDPVATDHVYG
Ga0080027_100947213	3300005993	Prmafrost Soil	VPEGSDDVVIPKAGGLIVSDNATVAEAAALSVTRTVKLLDPAAPGVPDIVPPVARLNPAGSDPMATDHE*
Ga0080027_100947214	3300005993	Prmafrost Soil	APAVPEGSDDVVIPKADGLIVSDSAAVAEATALSVTRTVKLLDPAAPGVPDIVPPVARLNPAGSDPLATDHEYGGDPPEAASACE*
Ga0066789_104946131	3300005994	Soil	VPAGSDEVVIAKAGGLMVKDNAAVTEADALSVTRTVKLLGPAVPGVPDMVPPAARLNPAGSTPLATAHAYGGDPPEAPSTWE*
Ga0066789_104946132	3300005994	Soil	AAVTEADALSVTRTVKLLGPAVPGVPDSVPPGARLNPAGSAPLATAHEYGGDPPEAPSAWE*
Ga0066790_104321872	3300005995	Soil	VPAASDVVVIPKGVAAGLMVSDSAAVTEATALSVTRTVKLLDPAVPGVPDIVPPGARFNPAGSNPLATVHTYGGDPPEAPSACE*
Ga0068871_1008471381	3300006358	Miscanthus Rhizosphere	KVGKLMVIDNAAVTETDALSVTRTAKSLGPGVPVTPEIVPPAARLNPGGNDPLATVHVYGGDPPEAASTCE*
Ga0075521_104752931	3300006642	Arctic Peat Soil	VPAGSDDVVIPKAGGLMVKDNAAVAEADALSVTRTVKLLDPAVPGVPDMVPAAARLNPAGSDPLATDHEYGGDPPEAPSVWE*
Ga0075521_104752932	3300006642	Arctic Peat Soil	VPASSDDVVIPKAGGLTVIDKAAEAEVDALSVTRTVKLLDPAVPGVPDMVPAGARLNPAGNVPLATAHAYGGDP
Ga0075520_13199972	3300006795	Arctic Peat Soil	VPAGSDDVVIPKAGRLTVIDKAAEAEVDALSVTRTVKLLDPAVPGVPDMVPAGARLNPAGNVPLATAHAYGGDPPEATSAWE*
Ga0066659_117826501	3300006797	Soil	MLNAGGLIVIDRAAVVDTDALSVTRTVKLLGPAVPGVPDIVPPAARVNPAGSDPADTVHEYGADPPAAASACE*
Ga0066710_1029863692	3300009012	Grasslands Soil	VPAGSDDVVISNTGGLIASESAAVAETEALSVTRTVKLLDPAVPGVPDMVPPAARLKPAGSVPLAIVHVYGGVPPEAPSACE
Ga0066710_1029863693	3300009012	Grasslands Soil	VPAGSDDVVILKAGGLIASESALVTEAGALSVTRTVKLLDPAVPGVPDMVPPAARLKPAGSVPLAIVHVYGGV
Ga0066793_107355972	3300009029	Prmafrost Soil	LIASESAAVAEADALSVTRTVKLLDPAVPGVPDIVPPAARLSPAGNDPLATDHVYGGVPPEAPSACA*
Ga0099828_118039421	3300009089	Vadose Zone Soil	MPDGSDGVVIPKAGGLMASDSAAVAEADALSVTRTVKLLDPAVPGGPDMVPPAARLSPAGSVPLATDHAYGGVPPVALKVTL*
Ga0105242_111183602	3300009176	Miscanthus Rhizosphere	MPTMPAGSDDVVILRAGKLIVIDNAAVTETDALSVTRTEKLVGPGVPVTPEIVPLADRLNPGGSDPLTNVHEYGGEPPEAASACE*
Ga0105248_123034211	3300009177	Switchgrass Rhizosphere	MPAGSDDVVILRAGKLIVIDNAAVTESYVLAAAPTEKLVGPGVPVTPEIVPLADRLNPGGSDPLTNVHEYGGEPPEAASACE*
Ga0105237_119204431	3300009545	Corn Rhizosphere	MPAGSDDVVILRAGKLIVIDNAAVTETDALSVTRTEKLVGPGVPVTPEIVPLADRLNPGGSDPLTNVHEYGGEPPEAASACE*
Ga0105238_105621732	3300009551	Corn Rhizosphere	VPADSDDVVIINAGLTVSDSAFVVLPLALSVTRTVKLLDPTIPDVPDIVPPAARFSPEGSDPAETAHE*
Ga0105855_10105843	3300009649	Permafrost Soil	MVSDSTAVTEFTALSVTRTVKLLDPAVPGVPDIVPPGARLNPAGSNPLATDHEYGGDPPEAPSA
Ga0105239_108714501	3300010375	Corn Rhizosphere	MPAGSDDVVIINAGLTVSDSAFVVLPLALSVTRTVKLLDPTIPGVPDIVPPAARFSPEGSDPAETAHE*
Ga0134124_110141773	3300010397	Terrestrial Soil	MLSAAGLIVSDSAAVVETDAPSVTFTVKLLVPGEPGVPEIVPLAERLNPEGSAPIDTVHVYGGDPPEAANVCEYAVPAVPAGS
Ga0134127_119213491	3300010399	Terrestrial Soil	NAVATDTDVMSAARTEKLVGPGVPVTPEIVPLADRLNPGGSDPLTNVHEYGGEPPEAASACE*
Ga0126347_15238141	3300010867	Boreal Forest Soil	VPAGSDDVVIASAGGLMASDSAAVAEADALSVTRTVKLLVPAAPGVPDMVPPAARLNPPGSVPLASAHVYGGDPPEAASACE*
Ga0105246_106888391	3300011119	Miscanthus Rhizosphere	SDDVVIVSAGGLIVSDWAFVMLPLALSVTFTVKLLVPGVPGVPEIVPPAERLNPAGSDPTDTDHEYGGDPPEAPNVCV*
Ga0150985_1018080192	3300012212	Avena Fatua Rhizosphere	VPAGNDEVLITTAGGLIVSVNAAVSDCDAPSVTFTVKLLDPAAPGVPDILPAARLSPDGSDPLAIDQEYGGVPPEVLSVCE*
Ga0150985_1018080193	3300012212	Avena Fatua Rhizosphere	MLTAGGLIVTDSGAVADCDALSVTFTLKLLDPAAPGVPDILPAARLSPDGSDPLAIDQEYGGVPPEAPSVCE*
Ga0150985_1120829151	3300012212	Avena Fatua Rhizosphere	PVPTVPAGRDEVVMLKAGGLIVIDRGAVVDTDALSVTRTEKLLGPAVPGVPEIVPPAANVNPAGSDPADTVHEYGGEPPDAASACE*
Ga0150985_1120829152	3300012212	Avena Fatua Rhizosphere	LIVIDRAAVVDTDALSVTRTVKLLGPAVPGVSEIVPPAARVNPAGSDPADTVHEYGGDPPETASTCE*
Ga0137387_109357241	3300012349	Vadose Zone Soil	VPAGSDDVVILKAGALIASESALVADAGALSVTRTVKLLDPAVPGVPDMVPPCARLNPVGSVPLATDHAYG
Ga0137387_109357242	3300012349	Vadose Zone Soil	MPAGSEDVEMLKAGGLIVIDKEAVVDTDALSVTRTVKLLGPAVPGVPDIVPPVARVNPAGSDPADTVHEYGGDPPAAASACE*
Ga0150984_1080518132	3300012469	Avena Fatua Rhizosphere	VPAGKDEVLITTAGGLIVSVNAAVSDCDAPSVTFTVKLLDPAAPGVPDILPAARLSPDGSDPLAIDQEYGGVPPEVLSVCE*
Ga0150984_1145341391	3300012469	Avena Fatua Rhizosphere	MVIDRGAVVDTDALSVTRTEKLLGPAVPGVPEIVPPAANVNPAGSDPADTVHEYGGEPPDAASACE*
Ga0150984_1145341392	3300012469	Avena Fatua Rhizosphere	MLKPGGLIVIDRAAVVDTDALSVTRTVKLLGPAVLGVPEIVPPAASVNPAGSDPADTVHEYGGEPPDAASACE*
Ga0164303_115584281	3300012957	Soil	MLNPGGLIVIDKAAVVATDALSVTRTVKLFGPAVPGVPDIVPPAARVNPEGSDPADTVHEYGGDPPEAASACE*
Ga0164305_118214871	3300012989	Soil	VPEGSDDAVMRKAGELIVIDKAAVVEIDALSVTRTVKLFGPAAPGVPDIVPPAARVNPEGSEPADTVHEYGGDPPEAASACE*
Ga0157370_120074351	3300013104	Corn Rhizosphere	MPKAGGLIVSDKGAVVDTDALSVTRTVKLLGPAVPGVPDIVPPAARVSPTGSDPADTVHVYGGEPPEAASACE*
Ga0157370_120074352	3300013104	Corn Rhizosphere	TVLAGSDDVVILSPGGLIVIDRAAVVDTEALSVTRTVKLLGPAVPGVPDIVPPAARVSPAGSDPADTVHVYGGEPPEAASACE*
Ga0157369_118946053	3300013105	Corn Rhizosphere	ILSPGGLIVSDKGAVVDTDVLSVTRTVKLPGPAVPGVPDIVPPVARVSPAGSDPADTVHVYGGDPPEAASACE*
Ga0157374_120525042	3300013296	Miscanthus Rhizosphere	MLRPGGLTAICSVAVAVTDALSVTRTLKLDDPAIVGVPDIDPVADKLRPEGSDPPDTAQVYGGDPPA
Ga0157374_121436672	3300013296	Miscanthus Rhizosphere	AVLTMRAGRDEVVMLGAGGLIVNDKGAVVDTDALSVTRTVKLLGPAVPGVPEIVPPAARVNPAGSDPADTVHVYGGDPPAAARDCE*
Ga0163162_103390682	3300013306	Switchgrass Rhizosphere	MPAGRDDVVILKVGGLIVSENAAVAETEALSVTRTAKLFAPAAPGVPDIVPPAARLNPGGSDPLAIDHEYGGDPPAAPSVCE*
Ga0157375_121066192	3300013308	Miscanthus Rhizosphere	MPTGSEDVVTLKVGKLMVIDNAAVTETDALSVTRTAKSLGPGVPVTPEIVPPAARLNPGGSDPLATVHVYGGDPPEAASTCE*
Ga0157375_137139791	3300013308	Miscanthus Rhizosphere	NADGLIASDSAAVVDCAPLSVTFKVKLLDPAALGVPDIAPPARLKPAGSDPLAMDHVYGAVPPVAVRVRE*
Ga0163163_104161702	3300014325	Switchgrass Rhizosphere	MPTGSEDVVTLKVGKLMVIDNAAVTETDALSVTRTAKSLGPGVPVTPEIVPPAARLNPGGNDPLATVHVYGGDPPEAASTCE*
Ga0182019_108602872	3300014498	Fen	MVSEKPAVAEADALSVTRTVKLLVPAALGEPDMFPPGVRLNPAGSVPVATAHEYGGDPPEAPSGWE*
Ga0182019_108602873	3300014498	Fen	MVRDKTAVAEADALSVTRTVKLLGPAVPGVPDIVPPAARLNPAGSAPLTSDHEYGGEPPEAPSAWE*
Ga0157376_113803971	3300014969	Miscanthus Rhizosphere	ILKVGKLMVIDNAAVTETDALSVTRTAKSLGPGVPVTPEIVPLAARLNPGGSDPLATVHVYGGDPPEAASTCE*
Ga0157376_129019581	3300014969	Miscanthus Rhizosphere	MPAGSEGVVMLHAGGFINSDRAAVVETDALSVTRTVKLLGPAVPGVPEIAPPAAKVNPAGSDPADTVHVYGGDPPEAASACE*
Ga0132258_122131312	3300015371	Arabidopsis Rhizosphere	VPTVPEGKDDVVIVTVGGLTVSDSAAVVETDALSVTRTVKLFGPGAVGVPDIVPAAARLNPAGSDPPDTDHA*
Ga0066662_118392241	3300018468	Grasslands Soil	IASESAAVVVADALSVTRTVKLLDPAVPGVPDMVPPAARLKPAGSVPLATDHAYGGVPPEAPSACE
Ga0210380_101541682	3300021082	Groundwater Sediment	MDAVVIVKAGLIVSDSALVVLPFALSVTFTVKLVDPALPGVPDTVPPADRLKPAGSVPSDTVHV
Ga0210380_104535551	3300021082	Groundwater Sediment	LIVIDNMAVVEFDARSVTRTVKLLGPAEPGVPDIVPPAARFNPAGNDPFTNDQVYGGSPPEAPSACEYEAPT
Ga0210380_104535552	3300021082	Groundwater Sediment	MPAGRDDVVILKVGGLIVSDSAAVVETDALSVTRTVKLLATAVPGIPDIVPPAARFNPDGNDPPAIDHEYGGDPPAALSVCE
Ga0210380_104778411	3300021082	Groundwater Sediment	KEGKVIVIDNGAVTETDALSVTRTVKLLGPGVPVTPEIVPPAARLNPGGSDPLTTVHVYGGDPPEAASTCE
Ga0210383_110760711	3300021407	Soil	RTGELTASERAAVDDADTLSVTFTVKLDEPVTVGVPDIVAPVRPRPAGSDPLVTDQVYGGVPPVALSPCE
Ga0210383_110760712	3300021407	Soil	LIASERAAVAVADTLSVTFTVKLAEPAAVGVPDIVPPAPRLRPAGMAPLVTDHVYGGVPPVALSPCE
Ga0210402_102643513	3300021478	Soil	VPAGSVAVVIAKVGLMVSDSVAVAAAEALSVTRTVKLPDPAAPGVPDIVPLVPRVNPDGSTPLASVHE
Ga0213851_13146811	3300021860	Watersheds	IPKAGELIVSESAAVAEADAVSVTRTVKLLEPAVPGVPDRVPPAARLNPAGSDPLATDHAYGGDPPVAASASE
Ga0208079_10798872	3300025481	Arctic Peat Soil	VPAGSDDVVIPKAAGLMVKDNAAVAEADALSVTRTVKLLGPAVPGVPDMVPPGARLNPAGSAPLATAHEYGGNPPEAPSA
Ga0207930_11444152	3300025604	Arctic Peat Soil	VPAGSDDVVIPKAAGLMLSDNAAVAEADALSVTRTVKLLGPAVPGVPDMVPPGARLNPAGSAPLATAHEYGGDPPEAPSA
Ga0209226_103591601	3300025865	Arctic Peat Soil	VSESAAVAETDALSVTRTVKLLDPAVPGVPDIVPPAARLSPAGSDPLATDHVYGGDPPEAPSNCE
Ga0207663_105594222	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPAGRDDVVILKVGGLIVSDSAAVVETDALSVTRTVKLLGTAVPGVPDIVPPAARLNPAGSDPADTNHEYGGEPPAAPSVCE
Ga0207649_113941841	3300025920	Corn Rhizosphere	MPAGSDEVVMLKEGGLIVMDRAAVLDTDALSVTRTVKLLGPAVPGVPDIVPPAARVSPAGSDPADTVHVYGGDPPEAASACE
Ga0207650_113425031	3300025925	Switchgrass Rhizosphere	VPAGSDGVVMVSTGRLIVSDSAAVVEPDALSATRTVKVFGPGVVGVPDIIPPPARLNPAGSDPADTDHEYG
Ga0207700_119834971	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VPTGSDDVVMLNPGGLIVIDRTVPVDTDALSETRTVKLFDPAVTGVPDIVPPAARVNPEGSDPADNTHEYGGEPPEAASACE
Ga0207700_119834972	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LNPGGLIVIDKAAVVEIDALSITRTVKLFGPAAPGVPDIVPPAARVNPDGSDPAETVQEYGGDPPEAASACE
Ga0207686_107047782	3300025934	Miscanthus Rhizosphere	MPTMPAGSDDVVILRAGKLIVIDNAAVTETDALSVTRTEKLVGPGVPVTPEIVPLADRLNPGGSDPLTNVHEYGGEPPEAASACE
Ga0207711_107969684	3300025941	Switchgrass Rhizosphere	MLSAAGLIVSDSAAVVETDAPSVTFTVKLLVPGEPGVPEIVPLAERLNPEGSDPIDTVHVYGGDPP
Ga0207641_112146911	3300026088	Switchgrass Rhizosphere	GSDDVVIVKTGGLIVIDNMAVVEFDARSVTRTVKLLDPAEPGVPDIVPPAARLNPAGKDPFTSDQVYGGSPPEAPTDCA
Ga0207641_112146912	3300026088	Switchgrass Rhizosphere	MPAGSEDVVTLKVGKLMVIDNAAVTETDALSVTRTAKSLGPGVPVTPEIVPPAARLNPGGNDPLATVHVYGGDPPEAASTCE
Ga0209839_101228141	3300026294	Soil	VILRAGGLMVSESAAVAEADALSVTRTKKLLDPAVPGVPDIVPPAARLSPAGNDPLATDQVYGGVPPEAPSACA
Ga0209839_101228142	3300026294	Soil	MVSESAAVAEADALSVTRTVKLLDPAVPGVPDIVPPGARLNPAGSNPLATDHEYGGDPPEAPSACK
Ga0209839_101228143	3300026294	Soil	VPAASDVVVIPKGVAAGLMVSDSAAVTEATALSVTRTVKLLDPAVPGVPDIVPPGARFNPAGSNPLATDHEYGGDPPEAPSACE
Ga0209168_106210801	3300027986	Surface Soil	VPAASADVVIPSAGGLIVTESAAVAEPLPLSLTFTVKFADPAALGVPEIVPAALRLSPAGSEPPATDHEYGGDPPEALRACE
Ga0268265_125819341	3300028380	Switchgrass Rhizosphere	IVIDNAAVTETDALSVTRTEKLVGPGVPVTPEIVPLADRLNPGGSDPLTNVHEYSSEPPEAASACE
Ga0170824_1054544851	3300031231	Forest Soil	KAAVVEIEALSVTRTVKLFGPEVPGVPDIVPPAARVNPEGSDPVDTVHEYGGDPPEAASACE
Ga0170824_1054544852	3300031231	Forest Soil	MLNTGGLMAIDKALVRLPLALSVRRTMKLLDPEVPGVPDIVPPAARLNPAGSDPADTVHEYGGDPPEAASACE
Ga0308194_101992811	3300031421	Soil	VPAGSVDVVIRKAAGFGLMVSEIAAVAEADALSVTSTVKLPEPAVPGVPDIVPPADRLNPAGSVPLATDHEYGGVPPEAASAWE
Ga0308194_101992812	3300031421	Soil	VPAGSDDVVIPKAGGLMVSDNAAVAEADALSVTRTVKLLDPALPGVPDMVPPAARLNPAGSDPLATDHEYGGNPPEAASAWE
Ga0307474_110480543	3300031718	Hardwood Forest Soil	VPAASVEVVILRFGGLTVIDKDAVAEADTLSVTFTVKLLEPAVVGVPEMVPPAARLRPAGRDPPATDQV
Ga0307475_107324892	3300031754	Hardwood Forest Soil	MVNDKAAVAKVEALSVNRTVKLLDPAVPGVPAIVPPEDRLNPDGNDPLATVHEYGGDPPDAPRFCA
Ga0307475_107324893	3300031754	Hardwood Forest Soil	MVSDNAAVAEADALSVTRTVKLLDPAVPGVPAIVPPEDRLNPDGNDPLATVHEYGGDPPDAPRF
Ga0308174_115702701	3300031939	Soil	LIVSDSDAVADPEALSVTFTVKLLGPAVPGVPEMDPLGERFNPAGNDPLATDQEYGGDPPEAASVCE
Ga0308176_108526961	3300031996	Soil	VPAGSDDVVMLKDGGLMASVSGAVMDPDALSVTLTVKLLDPAAPGVPDIVPPAERLKPVGSEPLATDHVYGGDPPEAPSACE
Ga0308176_108526962	3300031996	Soil	MPIAGGLIAIVKGAVADADALSVARTVKLLDPAALGVPDIVPPAERLNPAGNDPLATDHEYGGDPPEAPSVCE
Ga0308176_108526963	3300031996	Soil	MPIPGGLIVSDRAAVADTDALSVARTVKLLDPAALGVPDIVPPAERLNPAGSDPLATDHEYGGDPPEATSACE
Ga0307470_104047883	3300032174	Hardwood Forest Soil	VPVGSDDVVMPNASGLIISDRALVTLRLALSVTRTVKLLDPAVPGVPDIVPPATRVNPEGSIPADSAHEYGGDPPEAASNCE
Ga0370501_0338403_117_365	3300034195	Untreated Peat Soil	VPAGSDDVVIPKAGALMVRDKTAVAEADALSVTRTVKLLGPAVPGVPDIVPPAARVNPAGSAPLATAHEYGGDPPEAPSTWE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082750

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences