Metagenome / Metatranscriptome Family F082902

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082902
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	82 residues
Representative Sequence	MAHKTVQFIIGQILTDEALRAQFLDEPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSG
Number of Associated Samples	87
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.21 %
% of genes near scaffold ends (potentially truncated)	16.81 %
% of genes from short scaffolds (< 2000 bps)	74.34 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.947 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.319 % of family members)
Environment Ontology (ENVO)	Unclassified (43.363 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (76.991 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.77% β-sheet: 0.00% Coil/Unstructured: 44.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.104.1.0: automated matches	d6dcda_	6dcd	0.63267
a.104.1.0: automated matches	d3nc3a_	3nc3	0.62891
a.104.1.0: automated matches	d5xw2a_	5xw2	0.62888
a.104.1.0: automated matches	d6n6qa_	6n6q	0.62798
a.104.1.0: automated matches	d3tkta_	3tkt	0.62792

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13185	GAF_2	8.85
PF02954	HTH_8	7.96
PF13505	OMP_b-brl	3.54
PF03886	ABC_trans_aux	2.65
PF00069	Pkinase	2.65
PF00072	Response_reg	1.77
PF13191	AAA_16	1.77
PF13564	DoxX_2	1.77
PF00196	GerE	1.77
PF12680	SnoaL_2	1.77
PF13620	CarboxypepD_reg	1.77
PF05368	NmrA	0.88
PF02424	ApbE	0.88
PF02566	OsmC	0.88
PF01740	STAS	0.88
PF08308	PEGA	0.88
PF00285	Citrate_synt	0.88
PF00158	Sigma54_activat	0.88
PF02321	OEP	0.88
PF13533	Biotin_lipoyl_2	0.88
PF02518	HATPase_c	0.88
PF07690	MFS_1	0.88
PF13557	Phenol_MetA_deg	0.88
PF03720	UDPG_MGDP_dh_C	0.88
PF11999	Ice_binding	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	10.62
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.77
COG0372	Citrate synthase	Energy production and conversion [C]	0.88
COG1477	FAD:protein FMN transferase ApbE	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.88
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.83 %
Unclassified	root	N/A	37.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.83 %
Unclassified	root	N/A	37.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.95 %
Unclassified	root	N/A	37.17 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.42 %
Metamonada	clade	All Organisms → cellular organisms → Eukaryota → Metamonada	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.19 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.31 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	2.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.65 %
Parabasalia	phylum	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia	0.88 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.31 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.31 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	2.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.77 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Trichomonadida	order	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida	0.88 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.88 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.31 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	2.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.77 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.88 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.88 %
Trichomonadidae	family	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae	0.88 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.88 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.31 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	2.65 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.77 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.77 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.88 %
Trichomonas	genus	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae → Trichomonas	0.88 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.88 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.88 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.31 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.77 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.77 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.77 %
unclassified Nitrosospira	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira	0.88 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.88 %
Trichomonas vaginalis	species	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae → Trichomonas → Trichomonas vaginalis	0.88 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.88 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.88 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.31 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.77 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.77 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.77 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.88 %
Nitrosospira sp. Nsp2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira → Nitrosospira sp. Nsp2	0.88 %
Trichomonas vaginalis	species	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae → Trichomonas → Trichomonas vaginalis	0.88 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.88 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.88 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_13859599	Not Available	748	Open in IMG/M
3300002568\|C688J35102_117847487	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae → Trichomonas → Trichomonas vaginalis	510	Open in IMG/M
3300004114\|Ga0062593_102618962	Not Available	573	Open in IMG/M
3300004114\|Ga0062593_103528080	Not Available	502	Open in IMG/M
3300004463\|Ga0063356_102766274	Not Available	755	Open in IMG/M
3300005176\|Ga0066679_10040749	All Organisms → cellular organisms → Bacteria	2622	Open in IMG/M
3300005294\|Ga0065705_10348609	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	941	Open in IMG/M
3300005335\|Ga0070666_10169051	All Organisms → cellular organisms → Bacteria → Acidobacteria	1531	Open in IMG/M
3300005353\|Ga0070669_100258046	Not Available	1390	Open in IMG/M
3300005353\|Ga0070669_100786876	Not Available	808	Open in IMG/M
3300005354\|Ga0070675_100003872	All Organisms → cellular organisms → Bacteria	11361	Open in IMG/M
3300005365\|Ga0070688_100013196	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	4653	Open in IMG/M
3300005436\|Ga0070713_101595611	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300005534\|Ga0070735_10072226	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
3300005538\|Ga0070731_10045745	All Organisms → cellular organisms → Bacteria → Proteobacteria	2923	Open in IMG/M
3300005568\|Ga0066703_10338188	Not Available	906	Open in IMG/M
3300005640\|Ga0075035_1379600	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300005764\|Ga0066903_104624412	Not Available	733	Open in IMG/M
3300005841\|Ga0068863_100306854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1540	Open in IMG/M
3300005844\|Ga0068862_100087574	All Organisms → cellular organisms → Bacteria → Acidobacteria	2708	Open in IMG/M
3300006196\|Ga0075422_10051921	Not Available	1487	Open in IMG/M
3300006844\|Ga0075428_102182391	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300006845\|Ga0075421_101834625	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006847\|Ga0075431_101061693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300006852\|Ga0075433_10142624	All Organisms → cellular organisms → Bacteria → Acidobacteria	2129	Open in IMG/M
3300006852\|Ga0075433_10237593	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1618	Open in IMG/M
3300006852\|Ga0075433_11036326	Not Available	714	Open in IMG/M
3300006852\|Ga0075433_11782294	Not Available	529	Open in IMG/M
3300006853\|Ga0075420_101400392	Not Available	600	Open in IMG/M
3300006854\|Ga0075425_100013065	All Organisms → cellular organisms → Bacteria	8926	Open in IMG/M
3300006854\|Ga0075425_100027708	All Organisms → cellular organisms → Bacteria	6265	Open in IMG/M
3300006871\|Ga0075434_100101810	All Organisms → cellular organisms → Bacteria → Acidobacteria	2879	Open in IMG/M
3300006903\|Ga0075426_10018810	All Organisms → cellular organisms → Bacteria	4934	Open in IMG/M
3300006903\|Ga0075426_10763384	Not Available	726	Open in IMG/M
3300006904\|Ga0075424_100670741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300006914\|Ga0075436_100461504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	926	Open in IMG/M
3300007255\|Ga0099791_10017341	All Organisms → cellular organisms → Bacteria	3067	Open in IMG/M
3300007255\|Ga0099791_10166120	Not Available	1035	Open in IMG/M
3300007258\|Ga0099793_10158953	Not Available	1073	Open in IMG/M
3300007265\|Ga0099794_10131144	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300009090\|Ga0099827_11732111	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300009143\|Ga0099792_10100788	All Organisms → cellular organisms → Bacteria → Acidobacteria	1516	Open in IMG/M
3300009143\|Ga0099792_10678801	Not Available	664	Open in IMG/M
3300009147\|Ga0114129_10092976	All Organisms → cellular organisms → Bacteria	4178	Open in IMG/M
3300009147\|Ga0114129_11542610	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300009147\|Ga0114129_11593610	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300009147\|Ga0114129_13232546	Not Available	529	Open in IMG/M
3300009148\|Ga0105243_11649496	Not Available	669	Open in IMG/M
3300009156\|Ga0111538_10020905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	8554	Open in IMG/M
3300009156\|Ga0111538_12100206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	710	Open in IMG/M
3300009162\|Ga0075423_11514433	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300009162\|Ga0075423_11818401	Not Available	657	Open in IMG/M
3300009553\|Ga0105249_10708634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1067	Open in IMG/M
3300010037\|Ga0126304_10245953	Not Available	1176	Open in IMG/M
3300010399\|Ga0134127_11386927	Not Available	773	Open in IMG/M
3300010399\|Ga0134127_12940873	Not Available	555	Open in IMG/M
3300011422\|Ga0137425_1067748	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300012189\|Ga0137388_11144344	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300012203\|Ga0137399_10048311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3072	Open in IMG/M
3300012203\|Ga0137399_10063346	All Organisms → cellular organisms → Bacteria	2746	Open in IMG/M
3300012208\|Ga0137376_11206501	Not Available	646	Open in IMG/M
3300012211\|Ga0137377_10295804	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300012211\|Ga0137377_10961646	Not Available	785	Open in IMG/M
3300012350\|Ga0137372_11134677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira → Nitrosospira sp. Nsp2	534	Open in IMG/M
3300012357\|Ga0137384_10869807	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300012361\|Ga0137360_10281109	Not Available	1377	Open in IMG/M
3300012502\|Ga0157347_1066434	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012519\|Ga0157352_1021812	Not Available	783	Open in IMG/M
3300012683\|Ga0137398_10733434	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	688	Open in IMG/M
3300012685\|Ga0137397_10055571	All Organisms → cellular organisms → Bacteria → Acidobacteria	2848	Open in IMG/M
3300012922\|Ga0137394_10030167	All Organisms → cellular organisms → Bacteria → Acidobacteria	4400	Open in IMG/M
3300012923\|Ga0137359_10251628	Not Available	1576	Open in IMG/M
3300012924\|Ga0137413_11052430	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	641	Open in IMG/M
3300012929\|Ga0137404_10365643	All Organisms → cellular organisms → Bacteria → Acidobacteria	1266	Open in IMG/M
3300012929\|Ga0137404_11240265	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300012930\|Ga0137407_10652432	Not Available	990	Open in IMG/M
3300012930\|Ga0137407_11944921	Not Available	561	Open in IMG/M
3300013306\|Ga0163162_13157273	Not Available	529	Open in IMG/M
3300015245\|Ga0137409_10604632	Not Available	926	Open in IMG/M
3300015264\|Ga0137403_10078253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3344	Open in IMG/M
3300015371\|Ga0132258_10809790	All Organisms → cellular organisms → Bacteria → Acidobacteria	2362	Open in IMG/M
3300015371\|Ga0132258_12471760	All Organisms → cellular organisms → Bacteria → Acidobacteria	1300	Open in IMG/M
3300015371\|Ga0132258_12644864	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300015371\|Ga0132258_12941036	Not Available	1183	Open in IMG/M
3300016341\|Ga0182035_10489678	All Organisms → cellular organisms → Bacteria → Acidobacteria	1048	Open in IMG/M
3300016404\|Ga0182037_10572846	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300017792\|Ga0163161_10441172	Not Available	1051	Open in IMG/M
3300018432\|Ga0190275_10420222	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1352	Open in IMG/M
3300018482\|Ga0066669_11202867	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300021081\|Ga0210379_10049291	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300021559\|Ga0210409_10045735	All Organisms → cellular organisms → Bacteria	4134	Open in IMG/M
3300021559\|Ga0210409_10251786	All Organisms → cellular organisms → Bacteria → Acidobacteria	1599	Open in IMG/M
3300024347\|Ga0179591_1213974	All Organisms → cellular organisms → Bacteria	3566	Open in IMG/M
3300025923\|Ga0207681_10083060	All Organisms → cellular organisms → Bacteria	2266	Open in IMG/M
3300025926\|Ga0207659_10004231	All Organisms → cellular organisms → Bacteria → Acidobacteria	8677	Open in IMG/M
3300025928\|Ga0207700_11122989	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300025945\|Ga0207679_10031769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3699	Open in IMG/M
3300025960\|Ga0207651_11504869	Not Available	606	Open in IMG/M
3300026075\|Ga0207708_11658200	Not Available	562	Open in IMG/M
3300026088\|Ga0207641_10259354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1627	Open in IMG/M
3300026285\|Ga0209438_1207471	Not Available	524	Open in IMG/M
3300026318\|Ga0209471_1315382	Not Available	518	Open in IMG/M
3300027903\|Ga0209488_10003371	All Organisms → cellular organisms → Bacteria → Acidobacteria	12830	Open in IMG/M
3300027903\|Ga0209488_10005248	All Organisms → cellular organisms → Bacteria	9980	Open in IMG/M
3300027907\|Ga0207428_10000698	All Organisms → cellular organisms → Bacteria	39012	Open in IMG/M
3300027907\|Ga0207428_10428385	Not Available	966	Open in IMG/M
3300028380\|Ga0268265_10404838	Not Available	1262	Open in IMG/M
3300028536\|Ga0137415_10011047	Not Available	8955	Open in IMG/M
3300028536\|Ga0137415_10488871	Not Available	1038	Open in IMG/M
3300032174\|Ga0307470_11385149	Not Available	580	Open in IMG/M
3300032828\|Ga0335080_10250771	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1934	Open in IMG/M
3300033412\|Ga0310810_10297867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1735	Open in IMG/M
3300034965\|Ga0370497_0009233	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1844	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.52%
Host-Associated	Host-Associated	42.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.75%
Plants	Host-Associated → Plants	42.48%
Aquatic	Environmental → Aquatic	1.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.73%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Sediment	Environmental → Aquatic → Sediment	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.19%
Loam	Environmental → Terrestrial → Soil → Loam	5.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.32%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	23.01%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005640	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034965	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_138595992	3300000363	Soil	MSQRTVQLIIGQILTDEEFRSNFLEQPTATLIALRDRGIDLTNVEIDALAQTDRRFWSVGAEWIDTRLQRC
C688J35102_1178474871	3300002568	Soil	MAHKTVQFIIGQILTDEGLRARFLDRPAETLSSLRDMGFELTNAEIDALTRTDYRLWATGAEWIDSRLQRCDLGSPAPGSAKPKPRR*
Ga0062593_1026189621	3300004114	Soil	MAQKNVQLIIGQILTDEEFRADFLERPRATLASLRDRGFELTNLEVDALARTDRRLWQSGAEWIDARIQRCRLVGGDAT*
Ga0062593_1035280801	3300004114	Soil	MAQKTVQRIIGQILTDEELRAGFLEQPLTTLEMLRDRGFELTTIEMDALMETDRRLWRRGAQWIDSRLQRCRLSGVEQT*
Ga0063356_1027662742	3300004463	Arabidopsis Thaliana Rhizosphere	MAQRTVQLIIGQILTDEEFRSEFLERPIETLRSLRERGVELTNVEIDALADTDRRLWLIAADWIDARLQRCRLVGGERK*
Ga0066679_100407492	3300005176	Soil	MAQKTVHLIIGQILTDEELRARFLDRPAETLSSLRDMGFDLTHAEIDALTRTDHRLWTLGAEWIDSRLQRCDLGSPAPGCAKPKSRR*
Ga0065705_103486092	3300005294	Switchgrass Rhizosphere	MAQRTVQLIIGQVLTDEELRSDFLKRPFETLTSLRDRGFELTKVEIDALVRTDRRFWAVGAEWIDGRLQRCRLSGGDRK*
Ga0070666_101690513	3300005335	Switchgrass Rhizosphere	MAQRTVQLIIGQILTDEEFRADFLERPLETLTSLRERGVDLTHVEIDALTQTDRRLWLIGAEWVDARLQRCRLVGGERK*
Ga0070669_1002580463	3300005353	Switchgrass Rhizosphere	MAQKNVQLVVGRILTDEEFRADFLTRPIATLASLRDRGFELTNIEVDALAGTDARLWVCGAEWIDPRIQRCRLNAGDDK*
Ga0070669_1007868761	3300005353	Switchgrass Rhizosphere	MAQKNVQLIIGRILTDEEFRADFLERPIVTLASLRDRGFDLTNIEVDALARTDARLWRCGAEWIDARIQRCRLNVGDAK*
Ga0070675_1000038723	3300005354	Miscanthus Rhizosphere	MAQKNVQLIIGQILTDEEFRADFLERPRATLASLRDRGFELTNLEVDALARTDRRLWQSGAEWIDARIQRCRLVGGDAK*
Ga0070688_1000131961	3300005365	Switchgrass Rhizosphere	VQLIIGQILTDEEFRADFLERPLETLTSLRERGVDLTHVEIDALTQTDRRLWLIGAEWVDARLQRCRLVGGERK*
Ga0070713_1015956112	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAHKNVQLIIGRILTDEELREQFLDQPFETLAALRDNGFDLTRSEIDALLLTDPRLWRAGPRWVDSRLQRCCLDWSNGSKRN*
Ga0070735_100722262	3300005534	Surface Soil	MAHKTVEVIIGRILTDEELRGKFLVSPVEVLSTFRDAGFDLTDAEIDALADTDRRLWESGADWVDSRLQRCCLKTSKRRNPH*
Ga0070731_100457454	3300005538	Surface Soil	MAQKTVQIIIGRILTDEELREKFLVAPVETLSAFRESGLELTDAEIDALTNTDRELWRSGAEWVDSRLQRCCLKTRAATRNAS*
Ga0066703_103381882	3300005568	Soil	MAHKTVQFIIGQILTDEELRARFLDRPAETLSSLRDIGFDLTNAEIDALTRTDRRLWTSGAEWIDSRLQRCDLRSPASGSGQSKSCS*
Ga0075035_13796002	3300005640	Permafrost Soil	MAHKTVQFIIGRILTDEELREKFLVAPVETLSAFRESGLELTDAEIEALTHTDRELWRSGAEWIDARLQRCCLKSRPGR*
Ga0066903_1046244121	3300005764	Tropical Forest Soil	MAHKTVQLIIGRILTDEELREKFLASPDDTLASLREMGFELTNAEIDALAGTDRQLWISGVEWIDSRLQRCRLGSEREALA*
Ga0068863_1003068543	3300005841	Switchgrass Rhizosphere	VIGRILTDEEFRADFLERPIVTLASLRDRGFDLTNTEVDALAGTDARLWQCGAEWIDPRIQRCRLSVGDAK*
Ga0068862_1000875743	3300005844	Switchgrass Rhizosphere	MAQKNVQLVVGRILTDEEFRADFLERPIATLASLRDRGFELTNIEVDALAGTDARLWVCGAEWIDPRIQRCRLNAGDDK*
Ga0075422_100519213	3300006196	Populus Rhizosphere	MAQRTVQLIIGQILTDEEFRSEFLERPLETLTSLRDKGVDLTHVEIDALIRTDSRVWWCFSALIDARLQRCRLVGGERK*
Ga0075428_1021823911	3300006844	Populus Rhizosphere	MAHKTVQFIIGQLLTDEELRETFLAAPVETLSSFRDAGFDLSDAEVAALANTNQQLWRAGADWIDTRLQRCCLKARPRH*
Ga0075421_1018346251	3300006845	Populus Rhizosphere	MAHKTVQFIIGQLLTDEELRETFLAAPVETLSSFRDAGFDLTDAEVAALANTNQQLWRAGADWIDTRLQRCCLKARPRH*
Ga0075431_1010616932	3300006847	Populus Rhizosphere	VQLIIGQILTDEEFRSEFLERPLETLTSLRDKGVDLTHVEIDALIRTDSRVWWCFSALIDARLQRCRLVGGERK*
Ga0075433_101426242	3300006852	Populus Rhizosphere	MAQRTVQFIIGQILTDEELRSRFLDRPIETLSSLRDMGFDLTTAEVDALTRTDRRLWTSGADWIDARLQRCDLGSPPRTSVKQKPR*
Ga0075433_102375932	3300006852	Populus Rhizosphere	MAHKTVQFIIGQILTDEELRARFLARPAETLSSLRDMGFELTNAEIDALTRTDHRLWTSGAEWIDSRLQRCDLGSPAPGSAKPKSRC*
Ga0075433_110363262	3300006852	Populus Rhizosphere	MAQKTVQFIIGQILTDEEFRRRFLDGPINTLSSLRELGFDLTNTEIDALERTDRRLWTSGAEWIDSRLQRC
Ga0075433_117822941	3300006852	Populus Rhizosphere	MAHKTVQFIIGQLLTDEELRETFLAAPVETLSSFRDAGFDLTDAEVAALANTNQQLWRAGADWIDTRLQRCC
Ga0075420_1014003921	3300006853	Populus Rhizosphere	MAQRTVQLIIGQILTDEEFRSEFLERPLETLTSLRDKGVDLTHVEIDALIRTDSRVWWCFSALIDARLQRC
Ga0075425_1000130657	3300006854	Populus Rhizosphere	MAHKTVQFIIGRILTDEELREKFLVAPVETLLAFRDSGLDLTDAEIDALTNTDPELWRSGAGWIDSRLQRCCLKTRQRHRRDKVRPS*
Ga0075425_1000277087	3300006854	Populus Rhizosphere	MAQKTVQFIIGQILTDEGLRARFLDRPAETLSSLRDMGFELTNAEIDALTRTDHRLWTSGAEWIDSRLQRCDLGSPAPGSAKPKSRC*
Ga0075434_1001018103	3300006871	Populus Rhizosphere	MAQKTVQFIIGQILTDEGLRARFLDRPAETLSSLRDMGFELTNAEIDALTRTDHRLWTSGVEWIDSRLQRCDLGSPAPGSAKPKSRC*
Ga0075426_100188105	3300006903	Populus Rhizosphere	VAHKTVQFIIGRILTDEELREKFLAAPIETLAAIRESGLELTDAEIEALTNTDRQLWRSGAGWIDSRLQRCCLTARPKR*
Ga0075426_107633842	3300006903	Populus Rhizosphere	MAHKTVQFVIGQILTDEELREKFLVAPVETLSAFRDSGLELSDAEIEALTNTDRKLWTSGPEWIDSRLQRCCLKTRRRQ*
Ga0075424_1006707412	3300006904	Populus Rhizosphere	MAQKTVQFIIGQILTDEEFRRRFLDGPINTLSSLRELGFDLTNTEIDALERTDRRLWTSGAEWIDSRLQRCDLGAGARGTAKAKTLR*
Ga0075436_1004615041	3300006914	Populus Rhizosphere	VAHKTVQFIIGRILTDEELREKFLAAPVETLSAIRESGLELTDAEVEALTNTDRRLWRFGAGWIDSRLQRCCLTARPRR*
Ga0099791_100173412	3300007255	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDEPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGARWIDARLQRCDLGSGGRNVAKPKTPR*
Ga0099791_101661202	3300007255	Vadose Zone Soil	MAQRTVQFIIGQILTDEELRARFLDGPIETLSSLRDMGFDLTTAEVDALIRTDRRLWTSGADWIDARLQRCDLGSPPRTSVKQQPR*
Ga0099793_101589531	3300007258	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDEPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRNVAKPKTPR*
Ga0099794_101311442	3300007265	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDGKIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRNVAKPKTPR*
Ga0099827_117321111	3300009090	Vadose Zone Soil	LKAETTVAHKTVQIIIGRILTDEELREKFLVAPVETLSAFRESGLDLTDAEVDALTNTDGALWRSGPGW
Ga0099792_101007882	3300009143	Vadose Zone Soil	MAHKTVQFIIGQILTDEELRARFLDQPIETLTSLRDKGFDLTKSEIDALLLTDPRLWRAGPQWVDSRLQRCRLRGPSLPELH*
Ga0099792_106788012	3300009143	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDGPIETLSALRDRGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGGNAAKPKTP*
Ga0114129_100929765	3300009147	Populus Rhizosphere	MAQKTVQFIIGQVLTDEELRARFLDRPVQTLSSLRDMGFDLTNAEIDALTQTDRRLWTSGADWIDARLQRCDLRSSTLRRAGDKSPR*
Ga0114129_115426102	3300009147	Populus Rhizosphere	MAQRTVQLIIGQILTDEEFRSEFLERPIETLRSLRERGIELTNVEIDALAQTDRRFWSIGVEWIDARLQRCRLVGGERK*
Ga0114129_115936102	3300009147	Populus Rhizosphere	MAHKTVQFIIGQLLTDEELRERFLAAPFETLSSFRESGLELTDAEMAALTSTDQRLWRAGADWIDARLQRCCLSPVRRRS*
Ga0114129_132325461	3300009147	Populus Rhizosphere	QLIIGQILTDEELRSDFIERPLETLMSLRDRGFELTNVEIDALAQTDRRFWAVGAEWVDQRLQRCRLTDGEPKRRRVS*
Ga0105243_116494961	3300009148	Miscanthus Rhizosphere	EEFRADFLERPIVTLASLRDRGFDLTNTEVDALAGTDARLWQCGAEWIDPRIQRCRLSVGDAK*
Ga0111538_100209057	3300009156	Populus Rhizosphere	MAQRTVQLIIGQILTDEEFRSEFLERPLETLTSLRDKGVDLTHVEIDALIRTDSRVWWCFSALIDARLQRCRLVSGERK*
Ga0111538_121002061	3300009156	Populus Rhizosphere	MAHKTVQFIIGQLLTDEELRERFLAAPFETLSSFRESGLELTDAEIAALTSTDQRLWRAGADWIDARLQRCCLSPVRRRS*
Ga0075423_115144331	3300009162	Populus Rhizosphere	GFQGFRPGIPVALAKGMAHKTVQSIIGQILTDEAIRERFLAAPVETLTSFRDSGLELTDAEMAALTNTDQRLWRAGADWIDARLQRCCLDPARRRS*
Ga0075423_118184012	3300009162	Populus Rhizosphere	MAQKTVQFIIVQVFTDEELQARFLDRPVQTLSSLRDMGFDLTNAEIDALTQTDRRLWTSGADWIDARLQRCDLRSSTLRRAGDKSPR*
Ga0105249_107086343	3300009553	Switchgrass Rhizosphere	MAQKNVQLVVGRILTDEEFRADFLTRPIATLASLRDRGFELTNIEVDALAGTDARLWVCGAEWIDPRIQRCRLNVGDAQ*
Ga0126304_102459532	3300010037	Serpentine Soil	MSQRTVQLIIGQILTDEEFRSSFLDQPTATLTALRDRGMELTNVEIDALAQTDRRFWAVGAEWIDTRLQRCRLVGGGLK*
Ga0134127_113869271	3300010399	Terrestrial Soil	MAQKNVQLIIGRILTDEEFRADFLERPIVTLASLRDRGFDLTNTEVDALAGTDARLWQCGAEWIDTRIQRCRLNVGDAK*
Ga0134127_129408732	3300010399	Terrestrial Soil	MAQRTVQLIIGQILTDEEFRSNFLERPLETLTSLRDRGVDLTHFEIDALIRTDSQVWRCFSLIDERLQRCRLVGGERT*
Ga0137425_10677481	3300011422	Soil	MAQRTVQLIIGQILTDEEFRSNFLERPIETLRSLRERGVELTNVEIDALSQTDRRFWLIGAEWIDARLQRCRLVG*
Ga0137388_111443442	3300012189	Vadose Zone Soil	LKAETTVAHKTVQFIIGRILTDEELREKFLVAPVETLSAFRESGLDLTDAEVDALTNTDRALWRSGADWIDKRLQRCCLKTRPAQGS*
Ga0137399_100483112	3300012203	Vadose Zone Soil	MAQRTVQFIIGQILTDEELRARFLDGPIETLSSLRDMGFDLTTAEIDALTRTDRRLWTSGADWIDARLQRCDLGSPPRTSVKQKPR*
Ga0137399_100633463	3300012203	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDGPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRNVAKPKTPR*
Ga0137376_112065012	3300012208	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDRPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRDVAKPKTPG*
Ga0137377_102958042	3300012211	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDGPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRDVAKPKTPR*
Ga0137377_109616461	3300012211	Vadose Zone Soil	MAQRTVQFIIWQILTDEELRARFLDGPIETLSSLRDMGFDLTTAEIDALTRTDRRLWTSGADWIDARLQRCDLGSPPRTSVKQKPR*
Ga0137372_111346772	3300012350	Vadose Zone Soil	HKTVQLIIGRILTDEELREKFLVAPVETLSAFRDSGLELTDADIEALVSTDLEWWRSGADKIDSRLQGCTLRKRATST*
Ga0137384_108698072	3300012357	Vadose Zone Soil	MRFAEGEATVAHKTVQFIIGRILTDEELREKFLVAPVETLRAFRESGLELTEAEIDALTNTDRELWKSGVDWIDSRFQRCCLKPRPRH*
Ga0137360_102811094	3300012361	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDEPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGVRNVAKPKTPR*
Ga0157347_10664341	3300012502	Arabidopsis Rhizosphere	MAHKTVHFIIGQLLTDEELRERFLAAPFETLSSFRESGLELTDAEMAALTSRDQRLWRAGADWIDARLQRCCLSPVRRRS*
Ga0157352_10218121	3300012519	Unplanted Soil	MAQRTVQLIIGQILTDEEFRADFLERPRATLASLRDRGFELTNLEVDALARTDRRLWQSGAEWIDARIQRCRLVGGDAT*
Ga0137398_107334341	3300012683	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDEPIETLSALRDRGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRNVAKPKTTR*
Ga0137397_100555712	3300012685	Vadose Zone Soil	MAQRTVQFIIGQILTDEELRARFLDGPIETLSSLRDMGFDLTTAEIDALTRTDRRLWTSGADWIDARLQRCDLGSPPRTSVKQQPR*
Ga0137394_100301675	3300012922	Vadose Zone Soil	MAQKTVQFIIGQILTDEELRARFLDRPVQTLSSLRDMGFDLTNAEIDALTQTDRRLWTSGADWIDARLQRCDLKSSPLRRAGDKSPR*
Ga0137359_102516282	3300012923	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDRPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRNVAKPKTPR*
Ga0137413_110524301	3300012924	Vadose Zone Soil	MAHKTVQFIIGQVLTDEALRAQFLDEPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRNVAKPKTPR*
Ga0137404_103656432	3300012929	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDGPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRDVAKPKTPG*
Ga0137404_112402652	3300012929	Vadose Zone Soil	MAHKTAQLIIGQILTDEELRERFLDQPVETLAALRDRGFELTKSEIDALLLTDARLWRAGPQWVDSRLQRCCLKTPPRD*
Ga0137407_106524321	3300012930	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRVQFLDRPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRNVAKPKTPR*
Ga0137407_119449211	3300012930	Vadose Zone Soil	MNTAQKVVQLIMGQILTDEELRANFLERPVETLARLRDMGFGLTDGEIDAITQTDRRLWQEGAKWVDARLQRSGLRPRRDDEP*
Ga0163162_131572731	3300013306	Switchgrass Rhizosphere	MAQKNVQLIIGRILTDEEFRADFLKRPIATLASLRDRGFELTNIEVDALTRTDGQLWRCGAEWIDPRIQRCRLNLGDANRGSSETGGCPHAR*
Ga0137409_106046322	3300015245	Vadose Zone Soil	IIGQILTDEQLRARFLGRPAETLSSFRDIGFDLTNTEIDALTRTDQRLWTSGAEWLDSRLQRCDLGSPARGPVKPRSRR*
Ga0137403_100782534	3300015264	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDGPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRDVAKPKTHR*
Ga0132258_108097902	3300015371	Arabidopsis Rhizosphere	MAQRTVQLIIGQILTDEEFRFDFLERPIETLASLRDRGFELTNVEVNALVQTDRRLWMVGADWIDDRLQRCQLNGGRRKTG*
Ga0132258_124717603	3300015371	Arabidopsis Rhizosphere	MAHKTVQLIIGQILTDEELRSSFLEQPLAALQRLRDRGLELTAGEMDALIATDRRLWRWGAQWIDSSLQRCRLNGVER*
Ga0132258_126448642	3300015371	Arabidopsis Rhizosphere	MAQRTVQLIIGQILTDEELRSHFLEWPIATLAILRDRGFELTDVETDALARTDRRLWQWGAEWIDTRLQRCRLSGGDQK*
Ga0132258_129410362	3300015371	Arabidopsis Rhizosphere	MSQRTVQLIIGQILTDEEFRFDFLDRPGETLARLQDRGFELTSVEVAALVRTDRRLWTDGADWIDGQLQRRQLIAGGRNAS*
Ga0182035_104896781	3300016341	Soil	MAHKTVQLIIGRILTDEAFRVSFLEDPAGTLSSLRDIGFDLTSAEVDALTHTDRRLWSSGADWIDGRLQRCRFGAR
Ga0182037_105728462	3300016404	Soil	MAHKTVQLIIGRILTDEAFRASFLEDPAGTLSSLRDMGFDLTSAEIDALRHTDRRLWSSGADWIDGRLQRCRFGAR
Ga0163161_104411722	3300017792	Switchgrass Rhizosphere	AQKNVQLVVGRILTDEEFRADFLTRPIATLASLRDRGFELTNIEVDALAGTDARLWVCGAEWIDPRIQRCRLSVGDAK
Ga0190275_104202222	3300018432	Soil	MAQRTVHLIIGQILTDEEFRSGFLERPIETLRSLRERGVELTNLEIDALAQTDRRFWLIGAEWIDSRLQRCRLVGGERK
Ga0066669_112028672	3300018482	Grasslands Soil	MAHKTVQFIIGRILTDEELREKFLVAPAETLSAFRESGLDLTDAEVDALTNTDRELWKSGADWIDKRLQRCCLKTR
Ga0210379_100492912	3300021081	Groundwater Sediment	MAQRTVQLIIGQILTDEEFRSGFLERPIETLRSLRERGVELTSVEIDALAQTDRRFWLIGAEWIDTRLQRCRLVGGERK
Ga0210409_100457352	3300021559	Soil	MAHKTVQLIVGQILTDEELRARFLDRPVETLSALRDMGFDLTNAEIDALRHTDRRLWTSGAQWIDARLQRCDLRLRVSQPAKKLPR
Ga0210409_102517863	3300021559	Soil	MAHRTVQLIIGQILTDEELRARFLDGPVEMLSSLRDMGFDLTNAEIDALAQTDRRLWTWGVDWIDGRLQRCDLGSRARVSAKNRSPR
Ga0179591_12139744	3300024347	Vadose Zone Soil	MAHKTVQFIIGRILTDEELREKFLVAPAHTLSAFRESGLDLTDAEIEALTQTDRALWRSGADWIDSRLQRCCLKTPPRD
Ga0207681_100830602	3300025923	Switchgrass Rhizosphere	MAQKNVQLVVGRILTDEEFRADFLTRPIATLASLRDRGFELTNIEVDALAGTDARLWVCGAEWIDPRIQRCRLNAGDDK
Ga0207659_100042313	3300025926	Miscanthus Rhizosphere	MAQKNVQLIIGQILTDEEFRADFLERPRATLASLRDRGFELTNLEVDALARTDRRLWQSGAEWIDARIQRCRLVGGDAK
Ga0207700_111229892	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAHKNVQLIIGRILTDEELREQFLDQPFETLAALRDNGFDLTRSEIDALLLTDPRLWRAGPRWVDSRLQRCCLDWSNGSKRN
Ga0207679_100317691	3300025945	Corn Rhizosphere	KASMIIRQILTDEEFRADFLERPLETLTSLRERGVDLTHVEIDALTQTDRRLWLIGAEWVDARLQRCRLVGGERK
Ga0207651_115048692	3300025960	Switchgrass Rhizosphere	MAQKNVQLIIGQILTDEEFRADFLERPRAALASLRDRGFELTNLEVDALARTDRRLWQSGAEWIDARIQRCRLVGGDAT
Ga0207708_116582001	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VQLIIGQILTDEEFRADFLERPLETLTSLRERGVDLTHVEIDALTQTDRRLWLIGAEWVDARLQRCRLVGGERK
Ga0207641_102593541	3300026088	Switchgrass Rhizosphere	VIGRILTDEEFRADFLERPIVTLASLRDRGFDLTNTEVDALAGTDARLWQCGAEWIDPRIQRCRLSVGDAK
Ga0209438_12074711	3300026285	Grasslands Soil	MAHKTVQFIIGQILTDEALRAQFLDEPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSG
Ga0209471_13153821	3300026318	Soil	MAQKTVHLIIGQILTDEELRARFLDRPAETLSSLRDMGFDLTHAEIDALTRTDHRLWTLGAEWIDSRLQRCDLGSPAPGCAKPKSR
Ga0209488_1000337115	3300027903	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLDEPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRNVAKPKTPR
Ga0209488_100052484	3300027903	Vadose Zone Soil	MAHKTVQFIIGQILTDEELRARFLDQPIETLTSLRDKGFDLTKSEIDALLLTDPRLWRAGPQWVDSRLQRCRLRGPSLPELH
Ga0207428_1000069810	3300027907	Populus Rhizosphere	MAQRTVQLIIGQILTDEEFRSEFLERPLETLTSLRDKGVDLTHVEIDALIRTDSRVWWCFSALIDARLQRCRLVGGERK
Ga0207428_104283852	3300027907	Populus Rhizosphere	MAQRTVQFIIGQILTDEELRSRFLDRPIETLSSLRDMGFDLTTAEVDALTRTDRRLWTSGADWIDARLQRCDLGSPPRTSVKQKPR
Ga0268265_104048381	3300028380	Switchgrass Rhizosphere	MAQKNVQLVVGRILTDEEFRADFLERPIATLASLRDRGFELTNIEVDALAGTDARLWVCGAEWIDPRIQRCRLNAGDDK
Ga0137415_100110472	3300028536	Vadose Zone Soil	MAHKTVQFIIGQILTDEALRAQFLYEPIETLSALRDSGFDLTNAEIDALGRTDRRLWTSGAQWIDARLQRCDLGSGGRNVAKPKTPR
Ga0137415_104888713	3300028536	Vadose Zone Soil	MAQRTVQFIIGQILTDEELRARFLDGPIETLSSLRDMGFDLTTAEIDALTRTDRRLWTSGADWIDARLQRCDLGSPPRTSVKQKPR
Ga0307470_113851492	3300032174	Hardwood Forest Soil	MAQKNVQLIIGRVLTDEEFRADFLERPIATLASLRDQGYELTNIEVDALTSTDGQLWRCGADWIDPRIQRCRLNLGDANRSPSEASGCPRVR
Ga0335080_102507711	3300032828	Soil	MAYKHVQLIIGRILTDEELREQFLDHPLETLTALRESGFELTKSEIDALLVTDPRLWRAGPRWVDSRLQRCCLDWSKGSERN
Ga0310810_102978673	3300033412	Soil	MAQRTVQLIIGQILTDEEFRADFLERPLETLTSLRERGVDLTHVEIDALTQTDRRLWLIGAEWVDARLQRCRLVGGERK
Ga0370497_0009233_1399_1638	3300034965	Untreated Peat Soil	MAQRAVQLIIGQILIDEAFRSDYLERPLDTLRALRERGIELTDVEIDALAHTDRRRWLIGAEWIDARLQRCRLVGGERT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082902

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences