Metagenome / Metatranscriptome Family F082958

Basic Information
Family ID	F082958
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	57 residues
Representative Sequence	VSVIGELAAFVAGAKASGLPAADRERLRLHFIDTVVAAQAGARIPEGKALQ
Number of Associated Samples	97
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.15 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.27 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Bacteria (57.522 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.584 % of family members)
Environment Ontology (ENVO)	Unclassified (23.009 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.062 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.16% β-sheet: 0.00% Coil/Unstructured: 46.84%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF09298	FAA_hydrolase_N	87.61
PF00920	ILVD_EDD	2.65
PF01557	FAA_hydrolase	1.77
PF01436	NHL	1.77
PF13714	PEP_mutase	0.88
PF05853	BKACE	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0179	2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)	Secondary metabolites biosynthesis, transport and catabolism [Q]	87.61
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	5.31
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.52 %
Unclassified	root	N/A	42.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.52 %
Unclassified	root	N/A	42.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.52 %
Unclassified	root	N/A	42.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.42 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.54 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.77 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.88 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1.77 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.88 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.88 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Paraburkholderia xenovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia xenovorans	1.77 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.88 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.88 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Paraburkholderia xenovorans LB400	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia xenovorans → Paraburkholderia xenovorans LB400	1.77 %
Mesorhizobium sp. L103C119B0	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L103C119B0	0.88 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.88 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Paraburkholderia xenovorans LB400	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia xenovorans → Paraburkholderia xenovorans LB400	1.77 %
Nocardioides sp. CF8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. CF8	0.88 %
Mesorhizobium sp. L103C119B0	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L103C119B0	0.88 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10734704	Not Available	568	Open in IMG/M
3300001619\|JGI20250J16331_103751	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300002245\|JGIcombinedJ26739_100432691	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300002245\|JGIcombinedJ26739_101600588	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300005435\|Ga0070714_100189090	All Organisms → cellular organisms → Bacteria → Proteobacteria	1878	Open in IMG/M
3300005534\|Ga0070735_10276459	All Organisms → cellular organisms → Bacteria → Proteobacteria	1015	Open in IMG/M
3300005537\|Ga0070730_10831005	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300005541\|Ga0070733_10632774	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300005542\|Ga0070732_10973880	Not Available	519	Open in IMG/M
3300005542\|Ga0070732_11041705	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005602\|Ga0070762_10774899	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005712\|Ga0070764_11064268	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300005921\|Ga0070766_10961178	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300006050\|Ga0075028_100718425	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300006052\|Ga0075029_100116024	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300006176\|Ga0070765_101355072	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300006176\|Ga0070765_101619192	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300006806\|Ga0079220_11265447	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300006893\|Ga0073928_10545268	Not Available	826	Open in IMG/M
3300006893\|Ga0073928_10905057	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300009523\|Ga0116221_1483328	Not Available	542	Open in IMG/M
3300009641\|Ga0116120_1281148	Not Available	518	Open in IMG/M
3300009665\|Ga0116135_1068202	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300009665\|Ga0116135_1408378	Not Available	552	Open in IMG/M
3300009684\|Ga0114958_10368779	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300009698\|Ga0116216_10799821	Not Available	565	Open in IMG/M
3300009700\|Ga0116217_10247234	Not Available	1158	Open in IMG/M
3300009826\|Ga0123355_11422430	Not Available	683	Open in IMG/M
3300010371\|Ga0134125_10036859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5450	Open in IMG/M
3300010379\|Ga0136449_104087321	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300010403\|Ga0134123_12323158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300012971\|Ga0126369_13644176	Not Available	505	Open in IMG/M
3300014164\|Ga0181532_10020404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4814	Open in IMG/M
3300014201\|Ga0181537_10840738	Not Available	622	Open in IMG/M
3300014495\|Ga0182015_10499385	Not Available	777	Open in IMG/M
3300014495\|Ga0182015_10776357	Not Available	602	Open in IMG/M
3300014501\|Ga0182024_10625624	Not Available	1343	Open in IMG/M
3300014657\|Ga0181522_10541254	Not Available	703	Open in IMG/M
3300014838\|Ga0182030_11687166	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300015089\|Ga0167643_1066490	Not Available	531	Open in IMG/M
3300016422\|Ga0182039_10060962	All Organisms → cellular organisms → Bacteria	2618	Open in IMG/M
3300017924\|Ga0187820_1314587	Not Available	518	Open in IMG/M
3300017940\|Ga0187853_10324901	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300017970\|Ga0187783_10105993	All Organisms → cellular organisms → Bacteria	2072	Open in IMG/M
3300017970\|Ga0187783_10870059	Not Available	650	Open in IMG/M
3300017970\|Ga0187783_10879334	Not Available	646	Open in IMG/M
3300017973\|Ga0187780_10362442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1025	Open in IMG/M
3300017975\|Ga0187782_11598957	Not Available	515	Open in IMG/M
3300018024\|Ga0187881_10306677	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300018035\|Ga0187875_10757412	Not Available	509	Open in IMG/M
3300018038\|Ga0187855_10696003	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300018040\|Ga0187862_10879410	Not Available	514	Open in IMG/M
3300018062\|Ga0187784_10053586	All Organisms → cellular organisms → Bacteria	3267	Open in IMG/M
3300019786\|Ga0182025_1177749	Not Available	1356	Open in IMG/M
3300020579\|Ga0210407_11130805	Not Available	592	Open in IMG/M
3300020580\|Ga0210403_10166039	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300020582\|Ga0210395_10225468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. CF8	1407	Open in IMG/M
3300020582\|Ga0210395_10449280	Not Available	970	Open in IMG/M
3300021402\|Ga0210385_10796094	Not Available	725	Open in IMG/M
3300021403\|Ga0210397_10039969	All Organisms → cellular organisms → Bacteria	2967	Open in IMG/M
3300021403\|Ga0210397_10669491	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300021404\|Ga0210389_10604799	Not Available	861	Open in IMG/M
3300021404\|Ga0210389_10836937	Not Available	718	Open in IMG/M
3300021407\|Ga0210383_11015045	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300021433\|Ga0210391_10208825	Not Available	1535	Open in IMG/M
3300021477\|Ga0210398_10145684	All Organisms → cellular organisms → Bacteria	1926	Open in IMG/M
3300021477\|Ga0210398_11573384	Not Available	510	Open in IMG/M
3300021860\|Ga0213851_1886512	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300021861\|Ga0213853_10712152	Not Available	769	Open in IMG/M
3300024225\|Ga0224572_1016314	Not Available	1424	Open in IMG/M
3300025906\|Ga0207699_10401368	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300026294\|Ga0209839_10198412	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300027173\|Ga0208097_1037854	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300027497\|Ga0208199_1041534	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300027528\|Ga0208985_1093786	Not Available	577	Open in IMG/M
3300027565\|Ga0209219_1175253	Not Available	508	Open in IMG/M
3300027604\|Ga0208324_1123450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L103C119B0	715	Open in IMG/M
3300027605\|Ga0209329_1038823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia xenovorans → Paraburkholderia xenovorans LB400	1001	Open in IMG/M
3300027625\|Ga0208044_1039158	Not Available	1569	Open in IMG/M
3300027641\|Ga0208827_1012141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3285	Open in IMG/M
3300027652\|Ga0209007_1042872	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300027660\|Ga0209736_1062410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia xenovorans → Paraburkholderia xenovorans LB400	1044	Open in IMG/M
3300027696\|Ga0208696_1065201	Not Available	1249	Open in IMG/M
3300027783\|Ga0209448_10272296	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300027911\|Ga0209698_10904786	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300027915\|Ga0209069_10871541	Not Available	543	Open in IMG/M
3300028775\|Ga0302231_10490063	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300028906\|Ga0308309_10927634	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300028906\|Ga0308309_11389529	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300028906\|Ga0308309_11555028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	564	Open in IMG/M
3300028906\|Ga0308309_11564577	Not Available	562	Open in IMG/M
3300029943\|Ga0311340_10808848	Not Available	789	Open in IMG/M
3300029999\|Ga0311339_10735647	Not Available	959	Open in IMG/M
3300030580\|Ga0311355_10415106	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300031057\|Ga0170834_100259969	Not Available	628	Open in IMG/M
3300031231\|Ga0170824_100961765	Not Available	557	Open in IMG/M
3300031236\|Ga0302324_102418177	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300031247\|Ga0265340_10221414	Not Available	848	Open in IMG/M
3300031561\|Ga0318528_10041583	All Organisms → cellular organisms → Bacteria	2301	Open in IMG/M
3300031715\|Ga0307476_10757090	Not Available	719	Open in IMG/M
3300031751\|Ga0318494_10763766	Not Available	566	Open in IMG/M
3300031781\|Ga0318547_10093329	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300031796\|Ga0318576_10009245	All Organisms → cellular organisms → Bacteria	3568	Open in IMG/M
3300031799\|Ga0318565_10022419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	2788	Open in IMG/M
3300031819\|Ga0318568_10322738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	960	Open in IMG/M
3300031831\|Ga0318564_10099016	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300031880\|Ga0318544_10346154	Not Available	577	Open in IMG/M
3300032160\|Ga0311301_11724659	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300032160\|Ga0311301_12581773	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300032783\|Ga0335079_10300840	Not Available	1751	Open in IMG/M
3300032828\|Ga0335080_10074879	All Organisms → cellular organisms → Bacteria	3755	Open in IMG/M
3300032954\|Ga0335083_10188881	All Organisms → cellular organisms → Bacteria	1899	Open in IMG/M
3300033158\|Ga0335077_10328857	Not Available	1663	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.35%
Host-Associated	Host-Associated	2.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.88%
Aquatic	Environmental → Aquatic	19.47%
Plants	Host-Associated → Plants	1.77%
Arthropoda	Host-Associated → Arthropoda	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.45%
Freshwater	Environmental → Aquatic → Freshwater	14.16%
Peat	Environmental → Terrestrial → Peat	4.42%
Sediment	Environmental → Aquatic → Sediment	3.54%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.77%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.71%
Loam	Environmental → Terrestrial → Soil → Loam	18.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.54%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.77%
Lake	Environmental → Aquatic → Freshwater → Lake	0.89%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.77%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.58%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.42%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.42%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.65%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.77%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.77%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.77%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001619	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_107347041	3300001593	Forest Soil	VSVIGELASFVARAKTSDLAAADRERLRLHFIDTVVAAQAGARIPEGKALQSLGDDGALAIRIGRQAAAIRLTEIDDI
JGI20250J16331_1037511	3300001619	Forest Soil	VSVIGELAAFVARVKASDLPATDWERLRLHFLDTVVAARVGALIPEGKALQGLGDDGALPVRIGRQAAAIRLTEIDDI
JGIcombinedJ26739_1004326912	3300002245	Forest Soil	VSVIGELASFVAGAKASGLPAADRERLRLHFIDTAVAARVGALIPE
JGIcombinedJ26739_1016005881	3300002245	Forest Soil	VSVIGELASFVARAKASGLPAADRERLRLHFIDTVVAAQAGARIP
Ga0070714_1001890902	3300005435	Agricultural Soil	VTVISELASFVTGAKASDLPAAQHQRLRLHLTDTVIAAVAGASIPEGQALRAIGGENDLASQIGRQAAAARLTEIDDI
Ga0070735_102764591	3300005534	Surface Soil	VTTIGELAFFVTAARASALPPAEQERLRLHLTDTVVAALAGAQIAEGRALRQLADGRSLAGRIGLQAAAIRLT
Ga0070730_108310052	3300005537	Surface Soil	VTVISQLAAFVTGAKASALPAAQRERLRLHLADTVVAALAGARIPEGQALHSVG
Ga0070733_106327741	3300005541	Surface Soil	VSVIGELASFVTGAKASALPAAEQERLRLHLTDTVLAALAGS
Ga0070732_109738802	3300005542	Surface Soil	MSVIGALASFVAQATASGLPAADRERLRLHFIDTVV
Ga0070732_110417051	3300005542	Surface Soil	VSVIGELAAFVARAKASDLPAADRERLRLHVIDTVVAAKAGAHIPEGKALQSLGDAGALAIRIGRQAA
Ga0070762_107748992	3300005602	Soil	VSVIGELASFVARANASGLAAADRERLRLHFVDTVVAARAGAHIPEGKALQSLGDDGALAIRIGRQAAAIRLTEIDDIHL
Ga0070764_110642682	3300005712	Soil	MTVIGELASFVAGARASALPAAQRERLRLHVADTA
Ga0070766_109611781	3300005921	Soil	VSVVSELAAFVAGAKASALPAADQERLRLHFTDTAVAALAGAHIPEGRALQKLGDDGALAIRIG
Ga0075028_1007184251	3300006050	Watersheds	VSVIGDLAAFVARAKASDLPAADRERLRLHFIDTVVAARVGALIPEGKALQSLGDDGALAIRIGRQAAAIRLTEIDDIH
Ga0075029_1001160242	3300006052	Watersheds	VSVIGELASFVAGAKASDLPAAERERLRLHFIDTVVAAQAGARIPEGKALQGLGDNGALA
Ga0070765_1013550721	3300006176	Soil	MTVIGELASFVAGAKAAALPAVQRERLRLHVADTAVAALAGASIPEGKALRSLGGDGSL
Ga0070765_1016191922	3300006176	Soil	VSVIGELAGFVAGAKISTLPAAEQERLRLHFTDTAVAALAGAHIPE
Ga0079220_112654471	3300006806	Agricultural Soil	LGQRIVTVISDLAAFVVKAKASDLPPAARERLSLHVADTVVAALAGANIPEGRALQN
Ga0073928_105452682	3300006893	Iron-Sulfur Acid Spring	VSVIGDLAAFVARAKASDLPAADWERLRLHFIDTVVAARVGALIPEGKALQGLGDDGALAIRIGRQAAA
Ga0073928_109050572	3300006893	Iron-Sulfur Acid Spring	VSVVGELAAFVAGAKAPGLPAADRERLRLHFIDTVVAARVGALIPEGKALQGLGDDGALAIRIGRQAAA
Ga0116221_14833282	3300009523	Peatlands Soil	VSVIGELASFVARAKASGLPAADRERLRLHFIDTVVAAQAGARIPEGKALQGLG
Ga0116120_12811481	3300009641	Peatland	VSVIGELASFVARAKASDLPAADRERLRLHFIDTVVAARVGALIPEGKALQSLGDDGAL
Ga0116135_10682021	3300009665	Peatland	MSVISTLAAFVAGANASALPAAQQERLRLHVADTAIASLAGASIPEGKSLRV
Ga0116135_14083781	3300009665	Peatland	VSVIGELASFVARANASGLAVADRERLRLHFVDTVVAAQAGAHIPEG
Ga0114958_103687791	3300009684	Freshwater Lake	LGNRAVSVIGELAAFVAGAKASGLSAADRERLRLHFIDTAVAAQVGALIPEVRALQS
Ga0116216_107998211	3300009698	Peatlands Soil	VSVIGELASFVAEAQPSSLPAAERERLRLHLTDTVVAALAGARIAEGKALQNFGEARALADRIGRQAAAIR
Ga0116217_102472342	3300009700	Peatlands Soil	VSVIGELTSFVARAKASDLPAADRERLRLHFIDTVVAARVGALIPEGKALQSLGDDGALAIRIGRQAAAIRLTEI
Ga0123355_114224301	3300009826	Termite Gut	MSVIGELASFVAGAKASALPEVEQERLRLHLTDTMIAALAGPRIAEGKALEALAGARTLAVRTGRRA
Ga0134125_100368596	3300010371	Terrestrial Soil	VSVIGELATFVTSIKASALPAAEQERLRLHLTDTVLAALAGSSIPEGKALQRLG
Ga0136449_1040873212	3300010379	Peatlands Soil	VSVIGELASFVARAKASDLPAADRERLRLHFIDTVVAARVGALIPEG
Ga0134123_123231581	3300010403	Terrestrial Soil	VSVIPTLATFVTDASASALPAAEQELLRLHLADTAVAALAGANIAEGRALA
Ga0126369_136441762	3300012971	Tropical Forest Soil	VSVIAELAAFVATAKASSLPAAEQERLRLHVADTAVAALAGANIPEGEALHSLGDDGALAIRIGRQ
Ga0181532_100204046	3300014164	Bog	VSVIGELASFVARAKASDLPAADRERLRLHFIDTVVAARVGALIPEGKALQSLGDDGALAIRIGRQAAAIRLTEID
Ga0181537_108407382	3300014201	Bog	MGSVIGELASFVTGAKASALPAAERERLALHFTDTVVAALAGARIPEGKALQNFGDAHA
Ga0182015_104993851	3300014495	Palsa	VSVIGELASFAAGAKAAALPPAERERLALHLTDTVIAALAGARIPEGKALQNFGDDGAFADRIGRRAA
Ga0182015_107763572	3300014495	Palsa	MSVIGELAAFVAGAKASALPDAEQERLRLHFADTAVAALAGASIAEGKALQSLGDGGSLAGRIGWQ
Ga0182024_106256242	3300014501	Permafrost	MSVIGELASFVAGADAAALPAAERERLSLHLTDTIIAAPAGARIAE
Ga0181522_105412542	3300014657	Bog	MGSVIGELASFVAGAKASALPEAERAQLALHLADTVVAALAGARIPEGQALQNFGDAR
Ga0182030_116871662	3300014838	Bog	MSVIGTLAAFVAGAKASALPAAQQERLRLHVADTAIASLAGASIPEGK
Ga0167643_10664901	3300015089	Glacier Forefield Soil	VSVIAELAAFVARAKASDLPAADWERLRLHFIDTVVAARVGALIPEGKALQGFGDDGALAVRIGRQAAAIRLTEIDDIHLPSCT
Ga0182039_100609621	3300016422	Soil	VSVIAELAAFVATAKASGLPTAQQERLRLHVADTAVAALAGANIPE
Ga0187820_13145872	3300017924	Freshwater Sediment	VSVIAELAAFVAGAKASDLPAADRERLRLHVIDTVVAAKAGAHI
Ga0187853_103249011	3300017940	Peatland	VSVIGELASFVARAKASDLPAADRERLRLHFIDTVVAA
Ga0187783_101059931	3300017970	Tropical Peatland	VSVIGELASFVVGAKASGLPPMERERLRLHLTDTAAAALAGVGIAEAKALHNFGDPGSLAGRIGRQAAAIRLTEIDDIHLP
Ga0187783_108700591	3300017970	Tropical Peatland	VSVIGELAAFVAGAKASALPAAERERVSLHLTDTVAAALAGACIPESK
Ga0187783_108793342	3300017970	Tropical Peatland	MSVIGELASFVAGAKAAALAQADQERLRLHLTDTAVAALAGASIAEGKVLQNFGDGSSL
Ga0187780_103624421	3300017973	Tropical Peatland	VGVIDGLAAFVAGANASALPAAQRERLQLHLTDTAVAALAGASIGEGRALHNFGDATSLAGRIGRQA
Ga0187782_115989572	3300017975	Tropical Peatland	VTVIAELASFVAGAEATRLPAAEQERLRLHLTDTAVAALVGA
Ga0187881_103066772	3300018024	Peatland	VSVIGELASFVARAKASDLPAADRERLRLHFIDTVVAARVGALIPEGKALQSLGDDG
Ga0187875_107574121	3300018035	Peatland	VSVIGELASFVARAKASDLPAADRERLRLHFIDTVVAAQAGAHIPEGRALQGLGDDGALAVCI
Ga0187855_106960032	3300018038	Peatland	VSVIGELASFVARAKASNLPAADRERLRLHFIDTVV
Ga0187862_108794101	3300018040	Peatland	VSVIGELASFVAGANASGLAAADRERLRLHFVDTVVAAQAGAHIPEGKALQSLGGDGALA
Ga0187784_100535861	3300018062	Tropical Peatland	MAANGSFGVGVIGELAAFVTGADARALPAAEQERLKLHVADTAAAALA
Ga0182025_11777494	3300019786	Permafrost	VSVIGELAAFVARAKASDLPAADRERLRLHFIDTVVA
Ga0210407_111308051	3300020579	Soil	VSVIGELASFVVRAKASDLAAADRERLRLHFVDTVVAAQAGARIPEGKALQSLGDDGALAIRIGRQAAAIRL
Ga0210403_101660391	3300020580	Soil	VSVIGELTSFVARAKASDLPAADRERLRLHFIDTAVAAKGGARIPEGK
Ga0210395_102254681	3300020582	Soil	VSVIGELAAFVAGAKASGLPAHERERQRLHVVDTAVAALAGACIAEGKALQKL
Ga0210395_104492801	3300020582	Soil	VSVIGELAAFVARAKASGLPAADRERLRLHFIDTVVAAQAGARISEGKA
Ga0210385_107960941	3300021402	Soil	MGELAAFVAGAKASGLSAHERERQRLHVVDTAVAALAGACIAEGQALRKLG
Ga0210397_100399694	3300021403	Soil	VSVIGELTSFVARAKASDLPAADRERLRLHFIDTAVAAKAGARIPEGKALQNLGDDG
Ga0210397_106694912	3300021403	Soil	VSVIGELAAFVARAKASGLPAADRERLRLHFIDTVVAAQAGARISEGKALQSLGDDGALAVRIGRQAAAIRLTEID
Ga0210389_106047992	3300021404	Soil	VSVIGALASFVAGAEASGLPAADRERLRLHFIDTVVAARVGALIPEG
Ga0210389_108369372	3300021404	Soil	VSVIGELASFVAGAKASDLPAADRERLRLHFIDTVVAAQAGARIPEGKALQSLGDAGALAVRIGRQAAAIRL
Ga0210383_110150452	3300021407	Soil	VSVIGELASFVAGAKASSLPAADRERLRLHFIDTVVAAQAGARIPEGK
Ga0210391_102088251	3300021433	Soil	VSVIGELTSFVARAKASDLPAADRERLRLHFIDTAVAAKA
Ga0210398_101456841	3300021477	Soil	VSVIGELASFVAQAKASGLPAADRERLRLHFIDTVVAAQAGAHIPEGKALQNLGDDGALAIRIGRQAAAIRLTEIDDIH
Ga0210398_115733842	3300021477	Soil	VSVIGELASFVARAKASGLPAADRERLRLHFIDTVVAAQAGARIPEGKALQS
Ga0213851_18865122	3300021860	Watersheds	VSVIGELAAFVVRAKASNLPAADWERLRLHFLDTVVAARVGALIPEGRALQSLGDDGALAIRIGRQAAAIRLTEIDD
Ga0213853_107121521	3300021861	Watersheds	VSVIGELASFVALAKASDRPVADRERLRLHFIDTAVAARVGALIPEGRALQSLGDDGALAVRIGRQAAAIR
Ga0224572_10163141	3300024225	Rhizosphere	VSVIGELASFVARAKASDLPAADRERLRLHFIDTVVAAKAGARIP
Ga0207699_104013682	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VSVIGELAAFVARAKASDLPAADRERLRLHVVDTVVAAKAGAHIPEGKALQSLGDDGALAIRIGRQAAAIRL
Ga0209839_101984122	3300026294	Soil	VSVIGELAAFVARAKAPGLPAADRELLRLHFIDTVVAARVGALIPEGKALQSLGDSGALAIRIGRQAAAIRLTE
Ga0208097_10378541	3300027173	Forest Soil	VSVIGELASFVAGAKASALPAADRERLRLHFIDTVVAARVGTSIPEGKALQSLGDD
Ga0208199_10415341	3300027497	Peatlands Soil	VSVIGELTSFVARAKASDLPAADRERLRLHFIDTVVAARVGALIPEGKALQSLGDDG
Ga0208985_10937861	3300027528	Forest Soil	VSVIGELAAFVAGAKASGLPAADRERLRLHFIDTVVAAQAGARIPEGKALQ
Ga0209219_11752531	3300027565	Forest Soil	VSVIGELASFVGRAKAANLPAADRERLRLHFIDTVVAAQAGACIPEGKALQSLGD
Ga0208324_11234502	3300027604	Peatlands Soil	MSVIASLASFVAGAKASALPAAERDRQRLHLTDTVVAALAGAHIP
Ga0209329_10388232	3300027605	Forest Soil	VSVIGELASFVAGAKASGLPAADRERLRLHFIDTAVAARVGALIPEGRALQSLGDDGALAIRIG
Ga0208044_10391581	3300027625	Peatlands Soil	VSVIGELTSFVARAKASDLPAADRERLRLHFIDTV
Ga0208827_10121411	3300027641	Peatlands Soil	MSVIASLASFVAGAKASALPAAERDRQRLHLTDTVVAALAGAQI
Ga0209007_10428722	3300027652	Forest Soil	MSVIGTLAAFVAGANASALPEKQRERLRLHVADTAIASLAG
Ga0209736_10624102	3300027660	Forest Soil	VSVIGELAAFVAGAKAPGLPAADRERLRLHFIDTVVAARVGALIPEGKALQGLGDDGALAIRIGRQAAAIRLTEI
Ga0208696_10652012	3300027696	Peatlands Soil	VSVIGELTSFVARAKASDLPAADRERLRLHFIDTVVAARVGALIPEGKALQS
Ga0209448_102722962	3300027783	Bog Forest Soil	VSVIGELASFVARAKASDLPSADRERLRLHFIDTVVAAQAGAC
Ga0209698_109047861	3300027911	Watersheds	VSVIGELASFVAGAKASGLPAADRERLRLHFIDTTVAARVGALIPEGRALQSLGDDGALAVRIGRQAA
Ga0209069_108715412	3300027915	Watersheds	VSVIGDLAAFVARAKASDLPAADRERLRLHFIDTVVAAQAGARIPEGKALQSLGDDGTLAVR
Ga0302231_104900631	3300028775	Palsa	MSVIGTLAAFVAGANASALPEAQRERLRLHVADTTIAS
Ga0308309_109276342	3300028906	Soil	VSVIGELAAFAARAKASNLPAADRERLRLHFIDTVVAAQAGAHIPEGKALQGLG
Ga0308309_113895292	3300028906	Soil	VSVIGDLAAFVARAKASDLPAADWERLRLHFIDTVVAARVGALIPEGKALQGLGDDGALAVRIGRQAAAIRLTEIDDIHL
Ga0308309_115550281	3300028906	Soil	VSVIGELAGFVAGAKISTLPAAEQERLRLHFTDTAVAALAGAHIPEG
Ga0308309_115645771	3300028906	Soil	VSVIGELASFVARAKASDLPAADRERLRLHFIDTVVAAQAGARIPEGKALQSLGDDGALAVRIGRQAAAIRLTEI
Ga0311340_108088481	3300029943	Palsa	MSVISTLAAFVAGANAWALPAAQRERLRLHVADTAIASLAGASIPEGKSLSVLTDSS
Ga0311339_107356471	3300029999	Palsa	MSVISTLAAFVAGANASALPEAQRERLRLHVADTAIASLAGASIPEGKSLRVLTDGSA
Ga0311355_104151061	3300030580	Palsa	MSVISTLAAFVAGANASALPEAQRERLRLHVADTAIASLAGASIPEGKSLSVL
Ga0170834_1002599692	3300031057	Forest Soil	VSVIGDLAAFVARAEASDLPAADRERLRLHFIDTVVAARVGA
Ga0170824_1009617652	3300031231	Forest Soil	VSVIGDLAAFVARAEASDLPAADRERLRLHFIDTVVAARVGALIPEGKALQSLGDDGASAIRIGRQAAA
Ga0302324_1024181771	3300031236	Palsa	MASVIGELASFVTGAKASALPAAERERLALHLTDTVVAALAGARIPEGKALWNFGDARALADRIGRRAAAIRLT
Ga0265340_102214142	3300031247	Rhizosphere	VSVIGELATFVTSIKASALPAAEQERLRLHLTDTVLAALAGNSIPEGKALQRLGEARSLAERIGRCAATIRLTEI
Ga0318528_100415833	3300031561	Soil	VSVIAELAAFVATANASGLPAAQQERLRLHVADTAVAALAGANI
Ga0307476_107570901	3300031715	Hardwood Forest Soil	VSVIGELASFVAGAEASGLPAADRERLRLHFIDTVVAARVGALIPEGKALQSLGDDGALAVRI
Ga0318494_107637661	3300031751	Soil	VSVISELASFVAGARAAALPADEQQRLRLHFTDTAVAALAGAHIPEGRALQSLGD
Ga0318547_100933293	3300031781	Soil	VSVIAELAAFVATANASGLPAAQQERLRLHVADTAVAALAGAYI
Ga0318576_100092455	3300031796	Soil	VSVIAELAAFVATANASGLPAAQQERLRLHVADTAVAALAGANIPE
Ga0318565_100224194	3300031799	Soil	VSVIAELAAFVATANASGLPAAQQERLRLHVADTAVAALAGANIP
Ga0318568_103227382	3300031819	Soil	VSVIAELAAFVATANASGLPAAQQERLRLHVADTAVAALAGANIPEGKALK
Ga0318564_100990161	3300031831	Soil	VSVIAELAAFVATANASGLPAAQQERLRLHVADTAVAALAGANIPEGKALQSLGDDGAL
Ga0318544_103461542	3300031880	Soil	VSVIAELAAFVATANASGLPAAQQERLRLHVADTAVAALAGAN
Ga0311301_117246591	3300032160	Peatlands Soil	VTVIASLASFVADAKASALPAAERERLRLHLTDTVVAALAGVRIAEGKALQKFGDAHALADRIGRR
Ga0311301_125817731	3300032160	Peatlands Soil	VSVIGELASFVARAKASDLPAADRERLRLHFIDTVVAARVGALIPEGKALQSLG
Ga0335079_103008402	3300032783	Soil	VGVIGELAAFVANAKAWALPAAERERLELHLTDTVVAALAGACIPEGNALQRFGEALSLAERVGRRAAAIRLTEIDD
Ga0335080_100748791	3300032828	Soil	VTVIASLAAFVAGAKASALPAAQRERLRLHFIDTAVAALAGAHIPEGRALENTGDAGSLAGRIG
Ga0335083_101888811	3300032954	Soil	VTIIGELASFVAGAKVSALPAREQERLSLHLTDTVMAA
Ga0335077_103288571	3300033158	Soil	VTVIASLAAFVAGAKASALPAAQRERLRLHFIDTAVAALAGAHIPEGRALQNTGNAGS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082958

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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