Metagenome / Metatranscriptome Family F083031

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083031
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	48 residues
Representative Sequence	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQVEF
Number of Associated Samples	103
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.10 %
% of genes near scaffold ends (potentially truncated)	97.35 %
% of genes from short scaffolds (< 2000 bps)	94.69 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (14.159 % of family members)
Environment Ontology (ENVO)	Unclassified (30.973 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.363 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.47% β-sheet: 0.00% Coil/Unstructured: 25.53%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF14454	Prok_Ub	12.39
PF04679	DNA_ligase_A_C	2.65
PF00106	adh_short	1.77
PF07719	TPR_2	0.88
PF12833	HTH_18	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	95.58 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	87.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	87.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.88 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig64142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300001089\|JGI12683J13190_1024842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300001137\|JGI12637J13337_1000999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2163	Open in IMG/M
3300002914\|JGI25617J43924_10343792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300005555\|Ga0066692_10615750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300005557\|Ga0066704_10988996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300005921\|Ga0070766_11091451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300006057\|Ga0075026_100081687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1577	Open in IMG/M
3300006059\|Ga0075017_100414042	All Organisms → cellular organisms → Bacteria → Acidobacteria	1012	Open in IMG/M
3300006175\|Ga0070712_101312467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300009012\|Ga0066710_102168748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300009624\|Ga0116105_1074947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300009633\|Ga0116129_1190499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300009645\|Ga0116106_1100664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300009646\|Ga0116132_1136045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300009665\|Ga0116135_1313061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300009672\|Ga0116215_1047766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1946	Open in IMG/M
3300009839\|Ga0116223_10004539	All Organisms → cellular organisms → Bacteria	12006	Open in IMG/M
3300009839\|Ga0116223_10235688	All Organisms → cellular organisms → Bacteria → Acidobacteria	1108	Open in IMG/M
3300010379\|Ga0136449_102781084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300012181\|Ga0153922_1113033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300012210\|Ga0137378_10798247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300012359\|Ga0137385_10352432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1260	Open in IMG/M
3300012683\|Ga0137398_10241965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1200	Open in IMG/M
3300012957\|Ga0164303_11163298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300014159\|Ga0181530_10027127	All Organisms → cellular organisms → Bacteria	4182	Open in IMG/M
3300014167\|Ga0181528_10191025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300014168\|Ga0181534_10175741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1108	Open in IMG/M
3300014168\|Ga0181534_10994566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300014169\|Ga0181531_10418388	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300014200\|Ga0181526_10695732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300014658\|Ga0181519_10594852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300014838\|Ga0182030_10629451	All Organisms → cellular organisms → Bacteria → Acidobacteria	1026	Open in IMG/M
3300015371\|Ga0132258_13259302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300016319\|Ga0182033_11481029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300016387\|Ga0182040_10845062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300016404\|Ga0182037_12098688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300017925\|Ga0187856_1224096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300017935\|Ga0187848_10190434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300017938\|Ga0187854_10360177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300017941\|Ga0187850_10541210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300017948\|Ga0187847_10803518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300018006\|Ga0187804_10397442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300018014\|Ga0187860_1330749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300018026\|Ga0187857_10288858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300018034\|Ga0187863_10758780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300018034\|Ga0187863_10828810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300018040\|Ga0187862_10450356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300018040\|Ga0187862_10524035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300018043\|Ga0187887_10416311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300018046\|Ga0187851_10774923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300018060\|Ga0187765_11071836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300019082\|Ga0187852_1128778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300020579\|Ga0210407_10763080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300020583\|Ga0210401_10240194	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300021180\|Ga0210396_10579848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300021405\|Ga0210387_11534907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300021433\|Ga0210391_10327004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1203	Open in IMG/M
3300021477\|Ga0210398_11323198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300021560\|Ga0126371_10817678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1078	Open in IMG/M
3300023030\|Ga0224561_1014973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300023090\|Ga0224558_1212154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300026341\|Ga0257151_1027612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300026514\|Ga0257168_1154316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300026984\|Ga0208732_1015638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300027090\|Ga0208604_1025628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300027570\|Ga0208043_1046682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1281	Open in IMG/M
3300027803\|Ga0209910_10026696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300027826\|Ga0209060_10150182	All Organisms → cellular organisms → Bacteria → Acidobacteria	1081	Open in IMG/M
3300027853\|Ga0209274_10614354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300027879\|Ga0209169_10640239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300027908\|Ga0209006_10048064	All Organisms → cellular organisms → Bacteria	3838	Open in IMG/M
3300027910\|Ga0209583_10015965	All Organisms → cellular organisms → Bacteria → Acidobacteria	2304	Open in IMG/M
3300028015\|Ga0265353_1011240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300028747\|Ga0302219_10228680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300028759\|Ga0302224_10475202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300028874\|Ga0302155_10341844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300029907\|Ga0311329_10522038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300029910\|Ga0311369_10749239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300029910\|Ga0311369_11071376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300029943\|Ga0311340_10109887	All Organisms → cellular organisms → Bacteria → Acidobacteria	3006	Open in IMG/M
3300029943\|Ga0311340_10526035	All Organisms → cellular organisms → Bacteria → Acidobacteria	1051	Open in IMG/M
3300029944\|Ga0311352_10625871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300029944\|Ga0311352_11427873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300030007\|Ga0311338_10950978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300030058\|Ga0302179_10527388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300030507\|Ga0302192_10230153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300030580\|Ga0311355_10931572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300030618\|Ga0311354_10958173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300030688\|Ga0311345_10899385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300030813\|Ga0265750_1081248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300030814\|Ga0265741_108731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300030862\|Ga0265753_1108436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300030879\|Ga0265765_1013824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300030974\|Ga0075371_11596277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300031028\|Ga0302180_10114114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1533	Open in IMG/M
3300031040\|Ga0265754_1009170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300031233\|Ga0302307_10638484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300031234\|Ga0302325_10867352	All Organisms → cellular organisms → Bacteria → Acidobacteria	1260	Open in IMG/M
3300031234\|Ga0302325_11742666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300031962\|Ga0307479_11251048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300032174\|Ga0307470_10859463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300032805\|Ga0335078_10466422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1634	Open in IMG/M
3300032828\|Ga0335080_10606858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300032828\|Ga0335080_11929088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300032893\|Ga0335069_12516422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300032898\|Ga0335072_11660535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300032954\|Ga0335083_11263586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300032954\|Ga0335083_11494767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300033158\|Ga0335077_10468069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1339	Open in IMG/M
3300033402\|Ga0326728_10258563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1647	Open in IMG/M
3300033824\|Ga0334840_160475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300034199\|Ga0370514_178758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.23%
Host-Associated	Host-Associated	1.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.68%
Aquatic	Environmental → Aquatic	26.55%
Plants	Host-Associated → Plants	0.89%
Fungi	Host-Associated → Fungi	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.33%
Freshwater	Environmental → Aquatic → Freshwater	23.89%
Peat	Environmental → Terrestrial → Peat	20.35%
Sediment	Environmental → Aquatic → Sediment	2.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%
Mycelium	Host-Associated → Fungi → Mycelium	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	23.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.62%
Loam	Environmental → Terrestrial → Soil → Loam	7.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.08%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.77%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.16%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	12.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.08%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.08%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.19%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.42%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.42%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.54%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00064790	2124908043	Soil	MNHADPNTMRARARQAIEILKTQLLGTGTIEPLVA
JGI12683J13190_10248421	3300001089	Forest Soil	MNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQVEFQDP
JGI12637J13337_10009991	3300001137	Forest Soil	MNHADPNTMRARARQATEILKTQLLGTGTVEPLVALYFD
JGI25617J43924_103437922	3300002914	Grasslands Soil	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQVEFQDPSVLEHF
Ga0066692_106157501	3300005555	Soil	MNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQVEFQDPS
Ga0066704_109889962	3300005557	Soil	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQVEFQDPSVLEHFD
Ga0070766_110914512	3300005921	Soil	MNHADPNTMRARARQATEILKTQLLETGTVEPLVALYFEE
Ga0075026_1000816871	3300006057	Watersheds	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQVEFQDPSVLEHFDVR
Ga0075017_1004140423	3300006059	Watersheds	MNHADPNTMRARARQATEILKSQLLGTGAIEPLVALYFDDHIEQVEFQDPSVLE
Ga0070712_1013124672	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNHADPNTMRARARQATELLKTQLLRTGAIEPLVALYFDDHIEQVEFQDPSVLEHFDVR
Ga0066710_1021687481	3300009012	Grasslands Soil	MAPDIIQTDMNHAAPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEHVEFKDLS
Ga0116105_10749472	3300009624	Peatland	MNHADPGTMRARARQAIEILQTQLLRTGTVEPLVALYFHDHIEQVQFEDPSVLD
Ga0116129_11904991	3300009633	Peatland	MNHADPGTMRARARRAIEILKAQLLQTGAVEPLVALYFHDHIEQVQFEDPSVLALLGHKKNILL*
Ga0116106_11006642	3300009645	Peatland	MNHANPDTMRARARQAIELLKTQLVDTGTVQPLVALYFYDHIE
Ga0116132_11360453	3300009646	Peatland	MRARARQAIEILKAQLLATGTVEPLVALYFEDHIEQVQFEDPSILDHFDIR
Ga0116135_13130611	3300009665	Peatland	MNHANPDTMRARARQAIELLKTQLVDTGTVQPLVALYFDNHIEQVQFED
Ga0116215_10477665	3300009672	Peatlands Soil	MAPDIIQADMNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQVEFQDPSVLEHFDVR
Ga0116223_1000453916	3300009839	Peatlands Soil	MAPDIIQADMNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQ
Ga0116223_102356881	3300009839	Peatlands Soil	MAPDIIQADMNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQVEFQDPSVL
Ga0136449_1027810842	3300010379	Peatlands Soil	MAPDIIQAAMNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYF
Ga0153922_11130332	3300012181	Attine Ant Fungus Gardens	MNHADPNTMRGRARQAIEILKTQLIETGTIQPLVALYF
Ga0137378_107982472	3300012210	Vadose Zone Soil	MAPDIIQAAMNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQVEFQDPS
Ga0137385_103524321	3300012359	Vadose Zone Soil	MAPDIIQADMNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQV
Ga0137398_102419651	3300012683	Vadose Zone Soil	MNHADPNPMRARARQATEILKTQLLGAGAIEPLVAL
Ga0164303_111632981	3300012957	Soil	MAPAIIQADMNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHLEQVEFQDPSVLEHFD
Ga0181530_100271271	3300014159	Bog	MNHAHPETMRARARQAIELLKTELVGTGTVQPLVALYFDNHIEQVQFEDPSVLDHFDIRT
Ga0181528_101910254	3300014167	Bog	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFD
Ga0181534_101757411	3300014168	Bog	MNHANPDTMRARARQAIELLKTQLVDTRTVQPLVALYFDDHIEQVQFEDPSVLDHFD
Ga0181534_109945661	3300014168	Bog	MNHADPGRMRARARQAIEILKTQLLQTGAVEPLVALYFHDHIE*
Ga0181531_104183883	3300014169	Bog	QIMNHADPDTMRTLAQQAVEFLKQQLLRTGTIEPLVAFYFSDHIEQVQFEDPSILEH*
Ga0181526_106957321	3300014200	Bog	MNHSDPNTMRARARQAIEILKAQLLDTGTVEPLVALYFE
Ga0181519_105948521	3300014658	Bog	MAPDIIQADMNHADPNTMRATARQATEILKTQLLGTGTVGPLVALYFDDHIEQVEFQDPS
Ga0182030_106294511	3300014838	Bog	MRARARQATEILKAQLLDTGTVEPLVALYFEDHIEQVQFEDPSVLDHFDIRTERSFDYL
Ga0132258_132593021	3300015371	Arabidopsis Rhizosphere	MAPAIIQADMNHADPNTMRARARQATEIVKTQLLGTGTVEPLVALYFDDHIEQ
Ga0182033_114810291	3300016319	Soil	MNYADPGTMRARARQAIEILKTQLLQTGSVAPLVALYFEDHIEQVQFEDSTVLDHFDIRT
Ga0182040_108450621	3300016387	Soil	MNHADPNVMRARARQATELLKTQLLRTGTIEPLVALYFDDHIEQVEFQDPSVLEHFDIRT
Ga0182037_120986882	3300016404	Soil	MNHADPGTMRARARQAIEILKTQLLHAGTVAPLVALYFDDHIEQVQFEDPTVLDH
Ga0187856_12240961	3300017925	Peatland	MNHAEPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQVEF
Ga0187848_101904342	3300017935	Peatland	MNHADPNTMRARARQATEILKTQLLGTGAIEPLVAL
Ga0187854_103601771	3300017938	Peatland	MNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQ
Ga0187850_105412101	3300017941	Peatland	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVA
Ga0187847_108035181	3300017948	Peatland	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQVEFQDPSVLEHFDVRTAR
Ga0187804_103974421	3300018006	Freshwater Sediment	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQVEFQDPS
Ga0187860_13307491	3300018014	Peatland	MRARARQAIELLKTQLVDTGTVQPLVALYFDDHIEQVQF
Ga0187857_102888581	3300018026	Peatland	MNHADPNTMRARARQATEILKTQLLGTGTVEPLVALYFDDHIEQVEFQ
Ga0187863_107587801	3300018034	Peatland	MRARARQASEILKAQLLETGTVEPLVALYFEDHIEQVQFEDPSVLDHFD
Ga0187863_108288102	3300018034	Peatland	MNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQVEFQDPSVLE
Ga0187862_104503561	3300018040	Peatland	MNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQVEFQDPSVL
Ga0187862_105240351	3300018040	Peatland	MNHADPNTMRARARQATEILKTQLLETGTVEPLVAL
Ga0187887_104163112	3300018043	Peatland	MNHADPNTMRATARQATEILKSQLLGTGAIEPLVALYFDDHIEQVEFQDPSVLEHF
Ga0187851_107749232	3300018046	Peatland	MRARARQAIELLKTQLVDTGIVQPLVALYFDDHIEQVQFEDPSVLDHFDIRT
Ga0187765_110718361	3300018060	Tropical Peatland	MNHADPGTMRARARQAIEILKTQLLQTGTVAPLVALYFDDHIEQVQFEDPIVLDHFDIRT
Ga0187852_11287783	3300019082	Peatland	MNHANPDTMRARARQAIELLKTQLVDTGTVQPLVALYFDDHIEQVQFE
Ga0210407_107630802	3300020579	Soil	MNHADPNTMRARARQATEILKSQLLGTGAIEPLVALYFD
Ga0210401_102401943	3300020583	Soil	MNHADPNTMRARARQAIELLMTQLFDAGTVDPVVALYFDDRIE
Ga0210396_105798481	3300021180	Soil	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQVEF
Ga0210387_115349071	3300021405	Soil	MNHADPNTMRARAQQATEILKAQLLKTGTVEPLVALYFEEHIEQV
Ga0210391_103270041	3300021433	Soil	MRARARQATEILKAQLLDTGTVEPLVALYFADHIEQVQFEDPSVLDHFDIRTE
Ga0210398_113231982	3300021477	Soil	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDH
Ga0126371_108176783	3300021560	Tropical Forest Soil	MNHADPGTMRARARQAIEILKTQLLQTGTVVPLVALYFDDHIE
Ga0224561_10149731	3300023030	Soil	MNHADPNTMRARARQATEILKTQLLGTRAIEPLVALYFDDHIEQVEFQDPSVLEHFDVRTVRS
Ga0224558_12121542	3300023090	Soil	MAPDIIQADMNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQVEFQ
Ga0257151_10276121	3300026341	Soil	MNHADPNTMRARARQATEILKTQLLGTGAIDPLVALYFDDHIEQVEFQDPSVL
Ga0257168_11543161	3300026514	Soil	MNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQVEFQD
Ga0208732_10156382	3300026984	Forest Soil	MNHADPNTMRARARQATEILKTQLLGTETIEPLVALY
Ga0208604_10256282	3300027090	Forest Soil	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQVEFQDPSVLEHFDIRT
Ga0208043_10466824	3300027570	Peatlands Soil	MNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIE
Ga0209910_100266962	3300027803	Thawing Permafrost	MNHADPNTMRATARQATEILKTQLLGTGTIEPLVALYF
Ga0209060_101501823	3300027826	Surface Soil	MNHADPNTMRARARQAAEILKTQLLGTGTIEPLVALYFDD
Ga0209274_106143542	3300027853	Soil	MNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQVEFQDPSA
Ga0209169_106402392	3300027879	Soil	MNHADPNTMRARARQAAEILKTQLLRTATIEPLVALYFDDHIEQVEFQ
Ga0209006_100480648	3300027908	Forest Soil	MSHADPNTMRARARQATEILKCQLLGTGAIEPLVA
Ga0209583_100159655	3300027910	Watersheds	MNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYF
Ga0265353_10112402	3300028015	Soil	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVAL
Ga0302219_102286802	3300028747	Palsa	MNHADPNTMRATARQATEILKTQLLGTGTVEPLVALYFDDHIEQVEFQDPSVL
Ga0302224_104752021	3300028759	Palsa	MNHADPNTMRARARQATEILKTQLLGTGTVEPLVALYFDDHIEQV
Ga0302155_103418442	3300028874	Bog	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQVEFQDPSVLEHFDVKTARSF
Ga0311329_105220381	3300029907	Bog	MNHADPNTMRATARQATEILKTQLLGTGTVGPLVALYFD
Ga0311369_107492391	3300029910	Palsa	MNHADPETMRARARQAVEFLKQQLLRTGTIEPLVAFYFADH
Ga0311369_110713762	3300029910	Palsa	MNHADPNTMRARARQATEILKTQLLGTGTVEPLVAL
Ga0311340_101098875	3300029943	Palsa	MNHADPETMRARARQAVEFLKQQLLRTGTIEPLVAFYFADHIEQI
Ga0311340_105260351	3300029943	Palsa	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDNHIEQVEFQDPS
Ga0311352_106258711	3300029944	Palsa	MNHADPETMRARARQAVEFLKQQLLRTGTIEPLVAFYFADHIEQIQFEDPSIL
Ga0311352_114278732	3300029944	Palsa	MNHADPNTMRARARQATEILKTQLLGTGAIERLVALYFD
Ga0311338_109509782	3300030007	Palsa	MRARARQATEILKAQLLETGTVEPLVALYFAEHIEQVQFADPSVLDH
Ga0302179_105273881	3300030058	Palsa	MNHANPYTMRASARQAIELLKTQLVDTGTVQPLVALYFDDHIEQVQFEDSS
Ga0302192_102301532	3300030507	Bog	MNHANPDTMRAMARQAIELLKTQLLDTGTVQPLVALYFDNH
Ga0311355_109315721	3300030580	Palsa	MNHANPYTMRASARQAIELLKTQLVDTGTVQPLVALYFDDHIEQVQFEDSSVLDHFDI
Ga0311354_109581731	3300030618	Palsa	MRARARQAIEILKAQLLDTGTVEPLVALYFADHIEQVQFEDPSVLDHFDI
Ga0311345_108993852	3300030688	Bog	MNHADPNTMRARARQATEILKTQLLGTGTIEPLVALYFDDHIEQ
Ga0265750_10812481	3300030813	Soil	MRARARQAIEILKAQLLDTGTVEPLVALYFADHIEQVQFED
Ga0265741_1087311	3300030814	Soil	MNHADPDTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQ
Ga0265753_11084361	3300030862	Soil	MRARARQAVEILKEQLLDTGTVEPLVALYFADHIEQVQFEDP
Ga0265765_10138241	3300030879	Soil	MNHADPNTMRARARQATEILTTQLLGTGTVEPLVALYFDDHIEQ
Ga0075371_115962772	3300030974	Soil	MNHADPNTMRARARQATEILKTQLLGTGTIEPLDALYFDDHIEQVEFQDPSVLEHFDVRT
Ga0302180_101141143	3300031028	Palsa	MNHADPETMRARARQAVEFLKQQLLRTGTIEPLVAFYF
Ga0265754_10091701	3300031040	Soil	MNHADPNTMRARARQATEFLKTQLLGTGAIEPLVALYFDDHIEQIEFQ
Ga0302307_106384841	3300031233	Palsa	MNHADPNTMRARARQATEILKTQLLGTGAIEPLVALYFDDHIEQVEFQDASVLEHFDVRT
Ga0302325_108673523	3300031234	Palsa	MNHSDPETMRARARQAIDFLTQQLLRTGTIEPLVAFY
Ga0302325_117426662	3300031234	Palsa	MRARARQAIEILKAQLLDTGTVEPLVALYFADHIEQVQFEDPSVLD
Ga0307479_112510482	3300031962	Hardwood Forest Soil	MNHADPNTMRARARQAIEILKTQLLGTGTIEPLVALYFHDHIEQV
Ga0307470_108594631	3300032174	Hardwood Forest Soil	MNHADPNTMRARARQATEILKAQLLGAGTIEPLVALYFDDHIEQV
Ga0335078_104664224	3300032805	Soil	MNHAEPGTMRARARQAIEILKAHLLQTGTVEPLVALYFDDHIEQAQFEDPS
Ga0335080_106068581	3300032828	Soil	MRARARQAIEILKAQLLQTGTVQPLVALYFDDHIEQVQFEDPSVL
Ga0335080_119290881	3300032828	Soil	MNHADPGTMRARARQAIEILKTQLLQTGTVAPLVALYFDDHIEQVQ
Ga0335069_125164221	3300032893	Soil	MNHADPGTMRARARQAIEILKTQLLQTGTVAPLVAL
Ga0335072_116605352	3300032898	Soil	MNHANPDTMRARARQAIELLKTQLVDTGTVQPLVALYFDDH
Ga0335083_112635861	3300032954	Soil	MRARARQATEILKAQLLDTGTVEPLVALYFEDHIE
Ga0335083_114947671	3300032954	Soil	MRLPRYPAIIQPDMNHADPGTMRARARQAIEILKAQLLQTGTVEPLVALYFADHIEQVQFEDPSV
Ga0335077_104680693	3300033158	Soil	MRARARQAIEILRAQLLHTGTVEPLVALYFDDHIEQVQFED
Ga0326728_102585631	3300033402	Peat Soil	MNHENPDTMCARARQAIALLKTQLVDTGTVQALVALYFDDHIEQVQF
Ga0334840_160475_466_585	3300033824	Soil	MRARARQAIELLKTQLVDTGTVQPLVALYFDNHIEQVQFE
Ga0370514_178758_433_549	3300034199	Untreated Peat Soil	MNHADPNTMRARARQATEILKTQLLGTGTVGPLVALYFD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083031

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences