Metagenome Family F083058

Basic Information
Family ID	F083058
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	79 residues
Representative Sequence	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Number of Associated Samples	103
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.06 %
% of genes near scaffold ends (potentially truncated)	44.25 %
% of genes from short scaffolds (< 2000 bps)	96.46 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (50.442 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.894 % of family members)
Environment Ontology (ENVO)	Unclassified (50.442 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (67.257 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.79% β-sheet: 0.00% Coil/Unstructured: 43.21%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13730	HTH_36	30.09
PF10005	zinc-ribbon_6	0.88
PF01695	IstB_IS21	0.88
PF00364	Biotin_lipoyl	0.88
PF00665	rve	0.88
PF14023	DUF4239	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.88
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.88
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.88
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.88
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.44 %
Unclassified	root	N/A	49.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.44 %
Unclassified	root	N/A	49.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.44 %
Unclassified	root	N/A	49.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.17 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.47 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	19.47 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908008\|FWIREl_GJ4R3DH02FH1SD	Not Available	540	Open in IMG/M
3300004092\|Ga0062389_102877757	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300004643\|Ga0062591_101240679	Not Available	729	Open in IMG/M
3300005328\|Ga0070676_10129485	All Organisms → cellular organisms → Bacteria → Proteobacteria	1594	Open in IMG/M
3300005329\|Ga0070683_100459727	Not Available	1215	Open in IMG/M
3300005331\|Ga0070670_100212572	Not Available	1682	Open in IMG/M
3300005333\|Ga0070677_10148435	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300005334\|Ga0068869_101246920	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005337\|Ga0070682_101021088	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005338\|Ga0068868_100819854	Not Available	841	Open in IMG/M
3300005339\|Ga0070660_101152375	Not Available	657	Open in IMG/M
3300005340\|Ga0070689_101986872	Not Available	532	Open in IMG/M
3300005343\|Ga0070687_100420009	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300005344\|Ga0070661_101624177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	547	Open in IMG/M
3300005356\|Ga0070674_100698749	All Organisms → cellular organisms → Bacteria → Proteobacteria	867	Open in IMG/M
3300005356\|Ga0070674_101570841	Not Available	593	Open in IMG/M
3300005365\|Ga0070688_101503246	Not Available	548	Open in IMG/M
3300005439\|Ga0070711_100455703	All Organisms → cellular organisms → Bacteria → Proteobacteria	1048	Open in IMG/M
3300005439\|Ga0070711_100715860	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005543\|Ga0070672_100700892	Not Available	887	Open in IMG/M
3300005544\|Ga0070686_100125904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1765	Open in IMG/M
3300005547\|Ga0070693_100385671	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300005548\|Ga0070665_102058372	Not Available	576	Open in IMG/M
3300005563\|Ga0068855_101848093	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005578\|Ga0068854_100586404	All Organisms → cellular organisms → Bacteria → Proteobacteria	950	Open in IMG/M
3300005615\|Ga0070702_101629093	Not Available	535	Open in IMG/M
3300005616\|Ga0068852_100499692	All Organisms → cellular organisms → Bacteria → Proteobacteria	1211	Open in IMG/M
3300005617\|Ga0068859_100484053	All Organisms → cellular organisms → Bacteria → Proteobacteria	1333	Open in IMG/M
3300005719\|Ga0068861_101185800	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005834\|Ga0068851_10326355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	888	Open in IMG/M
3300005841\|Ga0068863_101469901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	690	Open in IMG/M
3300005842\|Ga0068858_101111166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	776	Open in IMG/M
3300006175\|Ga0070712_100332370	All Organisms → cellular organisms → Bacteria → Proteobacteria	1238	Open in IMG/M
3300006175\|Ga0070712_100332881	Not Available	1238	Open in IMG/M
3300006175\|Ga0070712_101836972	Not Available	531	Open in IMG/M
3300006237\|Ga0097621_100070255	All Organisms → cellular organisms → Bacteria	2891	Open in IMG/M
3300006881\|Ga0068865_100816478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	805	Open in IMG/M
3300006881\|Ga0068865_101640435	Not Available	579	Open in IMG/M
3300009148\|Ga0105243_10908849	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300009553\|Ga0105249_10937057	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300010397\|Ga0134124_10189837	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1858	Open in IMG/M
3300011119\|Ga0105246_11031145	Not Available	747	Open in IMG/M
3300011119\|Ga0105246_12266186	Not Available	530	Open in IMG/M
3300012892\|Ga0157294_10057864	Not Available	899	Open in IMG/M
3300012893\|Ga0157284_10212380	Not Available	589	Open in IMG/M
3300012899\|Ga0157299_10062125	Not Available	871	Open in IMG/M
3300012900\|Ga0157292_10351380	Not Available	545	Open in IMG/M
3300012903\|Ga0157289_10128442	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300012909\|Ga0157290_10283715	Not Available	603	Open in IMG/M
3300012913\|Ga0157298_10159431	Not Available	684	Open in IMG/M
3300012915\|Ga0157302_10542338	Not Available	511	Open in IMG/M
3300012951\|Ga0164300_10280868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	861	Open in IMG/M
3300012957\|Ga0164303_10965683	Not Available	603	Open in IMG/M
3300012958\|Ga0164299_11430567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	536	Open in IMG/M
3300012960\|Ga0164301_11010271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	654	Open in IMG/M
3300012961\|Ga0164302_10201990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1223	Open in IMG/M
3300012984\|Ga0164309_11198939	Not Available	637	Open in IMG/M
3300012986\|Ga0164304_10469258	Not Available	912	Open in IMG/M
3300012987\|Ga0164307_11439621	Not Available	582	Open in IMG/M
3300012988\|Ga0164306_11211660	Not Available	633	Open in IMG/M
3300013105\|Ga0157369_10489740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1272	Open in IMG/M
3300013296\|Ga0157374_10648730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1067	Open in IMG/M
3300013296\|Ga0157374_11458184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	707	Open in IMG/M
3300013297\|Ga0157378_11040587	Not Available	854	Open in IMG/M
3300013306\|Ga0163162_13483410	Not Available	501	Open in IMG/M
3300013308\|Ga0157375_11387990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	827	Open in IMG/M
3300015077\|Ga0173483_10355634	Not Available	737	Open in IMG/M
3300015200\|Ga0173480_10322978	Not Available	870	Open in IMG/M
3300015201\|Ga0173478_10097516	Not Available	1077	Open in IMG/M
3300015371\|Ga0132258_10818144	All Organisms → cellular organisms → Bacteria → Proteobacteria	2349	Open in IMG/M
3300015372\|Ga0132256_102368212	Not Available	634	Open in IMG/M
3300015373\|Ga0132257_103995887	Not Available	536	Open in IMG/M
3300017792\|Ga0163161_10553655	Not Available	943	Open in IMG/M
3300018067\|Ga0184611_1264010	Not Available	606	Open in IMG/M
3300018073\|Ga0184624_10475070	Not Available	546	Open in IMG/M
3300018476\|Ga0190274_10622321	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300018476\|Ga0190274_11205697	Not Available	841	Open in IMG/M
3300019361\|Ga0173482_10034981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1545	Open in IMG/M
3300019362\|Ga0173479_10064841	Not Available	1247	Open in IMG/M
3300019362\|Ga0173479_10788861	Not Available	524	Open in IMG/M
3300021475\|Ga0210392_10436822	Not Available	958	Open in IMG/M
3300024232\|Ga0247664_1162991	Not Available	526	Open in IMG/M
3300024249\|Ga0247676_1039237	Not Available	766	Open in IMG/M
3300025898\|Ga0207692_10522276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	756	Open in IMG/M
3300025899\|Ga0207642_10374943	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300025901\|Ga0207688_10291430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	996	Open in IMG/M
3300025907\|Ga0207645_10077512	All Organisms → cellular organisms → Bacteria → Proteobacteria	2129	Open in IMG/M
3300025908\|Ga0207643_10036761	All Organisms → cellular organisms → Bacteria	2746	Open in IMG/M
3300025919\|Ga0207657_10620263	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300025921\|Ga0207652_11096997	Not Available	696	Open in IMG/M
3300025927\|Ga0207687_10554599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	964	Open in IMG/M
3300025934\|Ga0207686_11268365	Not Available	604	Open in IMG/M
3300025934\|Ga0207686_11359116	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300025935\|Ga0207709_11776079	Not Available	513	Open in IMG/M
3300025937\|Ga0207669_11572477	Not Available	561	Open in IMG/M
3300025940\|Ga0207691_11413607	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300025941\|Ga0207711_10589134	Not Available	1037	Open in IMG/M
3300025942\|Ga0207689_10361327	All Organisms → cellular organisms → Bacteria → Proteobacteria	1207	Open in IMG/M
3300025944\|Ga0207661_10263624	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300025949\|Ga0207667_10712989	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300025960\|Ga0207651_11740275	Not Available	561	Open in IMG/M
3300025981\|Ga0207640_10406043	All Organisms → cellular organisms → Bacteria → Proteobacteria	1111	Open in IMG/M
3300025986\|Ga0207658_10717996	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300026023\|Ga0207677_10240707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1464	Open in IMG/M
3300026035\|Ga0207703_12329059	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300026116\|Ga0207674_11170767	Not Available	738	Open in IMG/M
3300026142\|Ga0207698_11249356	Not Available	757	Open in IMG/M
3300028380\|Ga0268265_10451309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1201	Open in IMG/M
3300031199\|Ga0307495_10101337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	683	Open in IMG/M
3300031366\|Ga0307506_10144339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	829	Open in IMG/M
3300031858\|Ga0310892_11278986	Not Available	525	Open in IMG/M
3300032075\|Ga0310890_10535319	Not Available	897	Open in IMG/M
3300032205\|Ga0307472_101363384	Not Available	686	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.33%
Environmental	Environmental	48.67%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.33%
Terrestrial	Environmental → Terrestrial	46.02%
Aquatic	Environmental → Aquatic	2.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.89%
Sediment	Environmental → Aquatic → Sediment	1.77%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	22.12%
Loam	Environmental → Terrestrial → Soil → Loam	14.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	22.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.54%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908008	Soil microbial communities from sample at FACE Site Metagenome WIR_Elev2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIREl_03761880	2124908008	Soil	MSSETAWKARYARLWKAAPKADVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPAGDSAP
Ga0062389_1028777571	3300004092	Bog Forest Soil	NACQKAHVADRALAHQRVQVALEAYRQVALPGSPSPAAISRVAGVHADTASHILAGLRAARESVQ*
Ga0062591_1012406792	3300004643	Soil	MPNETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0070676_101294854	3300005328	Miscanthus Rhizosphere	MSSETAWKARYARLWNAEKADAPYRALSRQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0070683_1004597272	3300005329	Corn Rhizosphere	MPNETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAALKATAGDSAP*
Ga0070670_1002125721	3300005331	Switchgrass Rhizosphere	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAALKAPAGDSAP*
Ga0070677_101484353	3300005333	Miscanthus Rhizosphere	MSSETAWKARYARLWKAAAKPDAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0068869_1012469203	3300005334	Miscanthus Rhizosphere	PKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0070682_1010210881	3300005337	Corn Rhizosphere	ETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0068868_1008198542	3300005338	Miscanthus Rhizosphere	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAALKAPAGDSAP*
Ga0070660_1011523752	3300005339	Corn Rhizosphere	MSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPAGDSAP*
Ga0070689_1019868721	3300005340	Switchgrass Rhizosphere	MSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0070687_1004200091	3300005343	Switchgrass Rhizosphere	MSSETAWKARYARLWKAAEKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAALKAGGSAP*
Ga0070661_1016241772	3300005344	Corn Rhizosphere	RLWNAAEKAGAPYRALSRQRVMVALEAYRQLALPGSPGPAALGRVADVRVETASRALAELKAAGE*
Ga0070674_1006987493	3300005356	Miscanthus Rhizosphere	AKPDVPYRALSHQRVMVALEAYRQLALPDLPGPTALGRVADVTMETAGHVLAELKAPAGDSAP*
Ga0070674_1015708411	3300005356	Miscanthus Rhizosphere	MPNETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARD
Ga0070688_1015032462	3300005365	Switchgrass Rhizosphere	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0070711_1004557031	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LSSETAWKARFARLWNASEKAAVTDRALAHQRVLVALEAHTQVRLPGMPGPTALSRVARVSEDFARRELASLRLEGVQ*
Ga0070711_1007158602	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LPNETAWKARFTRLWQASEKPDAADRALAHQRVQVALEAYRQVALPGWPGPTALSRVAGVHERTASRILAALKAAGGSAP*
Ga0070672_1007008923	3300005543	Miscanthus Rhizosphere	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAG
Ga0070686_1001259042	3300005544	Switchgrass Rhizosphere	MSSETAWKARYARLWNAEKADAPYRALSRQRVMVALEAYRQLALPGSPGPAALGRVADVRMETASRVLAELKAAGA*
Ga0070693_1003856711	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAALKAPARDSAP*
Ga0070665_1020583721	3300005548	Switchgrass Rhizosphere	MLVPAPDRHGLGQTKERTAMPSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0068855_1018480931	3300005563	Corn Rhizosphere	ETAWKARYARLWNASAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0068854_1005864041	3300005578	Corn Rhizosphere	KARYARLWNAEKADAPYRALSRQRVMVALEAYRQLALPGSPGPAALGRVADVRMETASRVLAELKAAGA*
Ga0070702_1016290931	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPAGDSAP*
Ga0068852_1004996922	3300005616	Corn Rhizosphere	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAALKAPARDSAP*
Ga0068859_1004840533	3300005617	Switchgrass Rhizosphere	MSSETAWKARYARLWKATPKTDAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0068861_1011858001	3300005719	Switchgrass Rhizosphere	ETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0068851_103263551	3300005834	Corn Rhizosphere	WKARYARLWNAEKADAPYRALSRQRVMVALEAYRQLALPGSPGPAALGRVADVRMETASRVLAELKAAGA*
Ga0068863_1014699012	3300005841	Switchgrass Rhizosphere	MSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGSPGPAALGRVADVRMETASRVLAELKAAGA*
Ga0068858_1011111661	3300005842	Switchgrass Rhizosphere	MSSETAWKARFARLWNAAEKAGAPYRALSRQRVMVALEAYRQLALPGSPGPAALGRVADVRMETASRVLAELKAAGA*
Ga0070712_1003323702	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LPNETAWKARFARLWHASEKPDAADRALAHQRVQVALEAYRQIALPGWPGPTALGRVAGVHERTASRILAVLKAAGESTP*
Ga0070712_1003328811	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSSETAWKARYARLWNATEKADAAYRSLSRQRVMVALEAYRQLALPGSPGPAALGRVADVRVEIASRALAELKAAVE*
Ga0070712_1018369722	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPSETAWKARYARLWNAAGKTDAPYRSLSRQRVLIALEAYRQVALPGSPGPAAISRVASVHEGTASRILAGLRAAGEGVQ*
Ga0097621_1000702553	3300006237	Miscanthus Rhizosphere	MSSETAWKARYARLWKAAPKADVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0068865_1008164781	3300006881	Miscanthus Rhizosphere	SETAWKARYARLWNAAEKPDAPYRALSRQRVMVALEAYRQLALPGSPSPASLGRVADVRADTASRVLAELKAAGA*
Ga0068865_1016404351	3300006881	Miscanthus Rhizosphere	MSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLA
Ga0105243_109088493	3300009148	Miscanthus Rhizosphere	WKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0105249_109370571	3300009553	Switchgrass Rhizosphere	RTMSSETAWKARYARLWKAAPKADVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0134124_101898372	3300010397	Terrestrial Soil	MSSETAWKARYARLWNATEKADAPYRALSRQRVMVALEAYRQLALPSSPGPAALGRVADVRVETASRVLA
Ga0105246_110311451	3300011119	Miscanthus Rhizosphere	MSSETAWKARYARLWNAEKADAPYRALSRQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPAGDSAP*
Ga0105246_122661861	3300011119	Miscanthus Rhizosphere	AMSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAALKAPAGDSAP*
Ga0157294_100578641	3300012892	Soil	MPNETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPAGDSAP*
Ga0157284_102123801	3300012893	Soil	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVAMETAGHVLAELKAPAGDTVP*
Ga0157299_100621251	3300012899	Soil	MSSETAWKARYARLWKAAEKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELRAPTGDSAP*
Ga0157292_103513801	3300012900	Soil	LWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAALKAPARDTVP*
Ga0157289_101284421	3300012903	Soil	AMSSETAWKARYARLLKAARKTDAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0157290_102837152	3300012909	Soil	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAGLKAPAGDSAP*
Ga0157298_101594312	3300012913	Soil	MSSETAWKARYARLWKAAKTDAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPAGDSAP*
Ga0157302_105423381	3300012915	Soil	WKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0164300_102808681	3300012951	Soil	MPSETAWKARYARLWKAAEKANAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAGLKAAGE*
Ga0164303_109656832	3300012957	Soil	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPAPDSAP*
Ga0164299_114305672	3300012958	Soil	MPSETAWKARYARLWKAAEKANASNRALSHQRVVVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAGLKAAGE*
Ga0164301_110102712	3300012960	Soil	AWKARYARLWNAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAGLKAAGE*
Ga0164302_102019902	3300012961	Soil	MSSETAWKARYARLWKAAEKANAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAGLKAAGE*
Ga0164309_111989392	3300012984	Soil	MSSETAWKARYARLWKAARKTDAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVAMETAGHVLAELKAPARDSAP*
Ga0164304_104692582	3300012986	Soil	MSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTAPGRVADVTMETAGHVLAALKAPARDSAP*
Ga0164307_114396212	3300012987	Soil	MPSETAWKARYARLWKAAPKTDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAALKAGGSAP*
Ga0164306_112116601	3300012988	Soil	SRAMPSETAWKARYARLWKAAEKANAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPAGDSAP*
Ga0157369_104897403	3300013105	Corn Rhizosphere	MSSETAWKARYARLWNAEKADAPYRALSRQRVMVALEAYRQLALPGSPSPASLGRVADVRMETASRVLAELKAAGA*
Ga0157374_106487303	3300013296	Miscanthus Rhizosphere	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGGGAIVTKKTADNALAALKAPAGDSAP*
Ga0157374_114581842	3300013296	Miscanthus Rhizosphere	MSSETAWKARYARLWNATEKADTPYRALSRQRVMVALEAYRQLALPGSPSPASLGRVADVRADTASRVLAELKAAVE*
Ga0157378_110405871	3300013297	Miscanthus Rhizosphere	MPNETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAALKAPAGDSAP*
Ga0163162_134834101	3300013306	Switchgrass Rhizosphere	MPNETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPAGDSTP*
Ga0157375_113879901	3300013308	Miscanthus Rhizosphere	RLWKAAPKADVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0173483_103556342	3300015077	Soil	MSSETAWKARYARLWKAAAKPDAPYRTLSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPAGDSAP*
Ga0173480_103229782	3300015200	Soil	MSSETAWKARYARLWKAAEKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPPGTAPHDPA
Ga0173478_100975163	3300015201	Soil	MSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAALKAGGSAP*
Ga0132258_108181441	3300015371	Arabidopsis Rhizosphere	APKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0132256_1023682121	3300015372	Arabidopsis Rhizosphere	PDRHGLGQTKERPAMSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP*
Ga0132257_1039958871	3300015373	Arabidopsis Rhizosphere	MLVPAPDRHGLGQTKERTAMSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAALKAPAGDSAP*
Ga0163161_105536552	3300017792	Switchgrass Rhizosphere	MSSETAWKARYARLWKAAPKADVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0184611_12640101	3300018067	Groundwater Sediment	MPNETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAELKALAGENAP
Ga0184624_104750702	3300018073	Groundwater Sediment	MSSETAWKARYARLWKAALKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0190274_106223213	3300018476	Soil	WKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAALKAPAGDSAP
Ga0190274_112056972	3300018476	Soil	MPNETAWKARYARLWKATAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0173482_100349811	3300019361	Soil	MPNETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0173479_100648413	3300019362	Soil	MSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0173479_107888611	3300019362	Soil	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0210392_104368223	3300021475	Soil	MSSETAWKARYARLWNASEKADVADRALAHQRVQVALEAYRQVGLPGSPGPTAISRVASVHEGTASRILAGLRAAGEGVQ
Ga0247664_11629912	3300024232	Soil	TGTALAKPRNTPAMSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0247676_10392372	3300024249	Soil	LSSETAWKARFARLWNACEKADVGDRALAHQRVQVALEAYRQVGLPGSPGPTAISRVARVHEGTASRILAGLRVAGEGVQ
Ga0207692_105222762	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPSETAWKARYARLWNATEKADAAYRSLSRQRVMVALEAYRQLALPGSPGPASLGRVADVRVETASRALAELKAASA
Ga0207642_103749433	3300025899	Miscanthus Rhizosphere	AWKARYARLWNAAEKPDAPYRSLGHQRVLVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPAGDSAP
Ga0207688_102914303	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	HETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0207645_100775121	3300025907	Miscanthus Rhizosphere	MSSETAWKARYARLWNAEKADAPYRALSRQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0207643_100367614	3300025908	Miscanthus Rhizosphere	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAALKAPAGDSAP
Ga0207657_106202631	3300025919	Corn Rhizosphere	MSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGSPGPAALGRVADVRMETASRVLAELKAAGA
Ga0207652_110969973	3300025921	Corn Rhizosphere	MPNETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0207687_105545991	3300025927	Miscanthus Rhizosphere	ALAKPRNTPAMSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0207686_112683651	3300025934	Miscanthus Rhizosphere	GLGQRPRNIRAMSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0207686_113591162	3300025934	Miscanthus Rhizosphere	PTGAALAQPRNTPAMSSETAWKARYARLWNAEKADAPYRALLRQRVMVALEAYRQLALPGSPGPAALGRVADVRMETASRVLAELKAAGA
Ga0207709_117760792	3300025935	Miscanthus Rhizosphere	WKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0207669_115724772	3300025937	Miscanthus Rhizosphere	MSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPDLPGPTALGRVADVTMETAGHVLAELKAPAGDSAP
Ga0207691_114136072	3300025940	Miscanthus Rhizosphere	SETAWKARYARLWNAEKADAPYRALSRQRVMVALEAYRQLALPGSPGPAALGRVADVRMETASRVLAELKAAGA
Ga0207711_105891343	3300025941	Switchgrass Rhizosphere	MSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPAGDSAP
Ga0207689_103613273	3300025942	Miscanthus Rhizosphere	MSSETAWKARYARLWKAAEKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0207661_102636243	3300025944	Corn Rhizosphere	MPNETAWKARYARLWKAAAKPDAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0207667_107129893	3300025949	Corn Rhizosphere	PKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAALKAPAGDSAP
Ga0207651_117402751	3300025960	Switchgrass Rhizosphere	MNIRPRPGKARYARLWNAEKADAPYRALSRQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAE
Ga0207640_104060431	3300025981	Corn Rhizosphere	QPRNTPAMSSETAWKARYARLWNAEKADAPYRALSRQRVMVALEAYRQLALPGSPGPAALGRVADVRMETASRVLAELKAAGA
Ga0207658_107179961	3300025986	Switchgrass Rhizosphere	ARTMSSETAWKARYARLWKAAPKADVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0207677_102407071	3300026023	Miscanthus Rhizosphere	PIHAQRTAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0207703_123290592	3300026035	Switchgrass Rhizosphere	KARYARLWNAEKADAPYRALSRQRVMVALEAYRQLALPGSPGPAALGRVADVRMETASRVLAELKAAGA
Ga0207674_111707671	3300026116	Corn Rhizosphere	MSSETAWKARYARLWKAAPKADAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHALAALKVPAGDSAP
Ga0207698_112493561	3300026142	Corn Rhizosphere	MPNETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGFVGHGSLGRVADVTMETAGHVLAELKAPARDSAP
Ga0268265_104513093	3300028380	Switchgrass Rhizosphere	MSSETAWKARYARLWKAAAKPDVPYRALSHQRVMVALEAYRQLALPGLPGPTALGRGADVTMETAGHALAALKAPAGDSAP
Ga0307495_101013372	3300031199	Soil	MPTETAWKARFSRLWNACEKADVAYRALAHQRVAIALEAYRQVSLPGLPGPAVLGRVASANEETARRALAALKAEGADAR
Ga0307506_101443392	3300031366	Soil	MPTETAWKARFSRLWNACEKADVAARALAHQRVAIALEAYRQVALPGLPGPAVLGRVASVNEETARRALAALKADAR
Ga0310892_112789862	3300031858	Soil	KARYARLWKAAKTDAPYRSLAHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0310890_105353192	3300032075	Soil	MSSETAWKARYARLWKAAKTDAPYRALSHQRVMVALEAYRQLALPGLPGPTALGRVADVTMETAGHVLAELKAPARDSAP
Ga0307472_1013633843	3300032205	Hardwood Forest Soil	LSSETAWKARFARLWNACEKADVGDSALAHQRVQVALEAYRQVGLPGSPGPTAISRVARVHEGTASRILAGLRVAGEGVQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083058

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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