Metagenome / Metatranscriptome Family F083086

Basic Information
Family ID	F083086
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	45 residues
Representative Sequence	AKKKAEATGVRIEGFTASELADVESALTWISQNKESQSAEPA
Number of Associated Samples	99
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.77 %
% of genes near scaffold ends (potentially truncated)	97.35 %
% of genes from short scaffolds (< 2000 bps)	90.27 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (97.345 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (15.929 % of family members)
Environment Ontology (ENVO)	Unclassified (30.973 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.982 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.00% β-sheet: 0.00% Coil/Unstructured: 70.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00072	Response_reg	93.81
PF05036	SPOR	0.88
PF04253	TFR_dimer	0.88
PF01266	DAO	0.88
PF00083	Sugar_tr	0.88
PF02897	Peptidase_S9_N	0.88
PF04893	Yip1	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.88
COG1770	Protease II	Amino acid transport and metabolism [E]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.35 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.35 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.35 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.46 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	89.38 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	84.96 %
Unclassified	root	N/A	2.65 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	84.96 %
Unclassified	root	N/A	2.65 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.77 %

Name	Rank	Taxonomy	Distribution
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	84.07 %
Unclassified	root	N/A	2.65 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.77 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.88 %

Name	Rank	Taxonomy	Distribution
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	84.07 %
Unclassified	root	N/A	2.65 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.77 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459023\|GZGNO2B01EJ10P	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300001137\|JGI12637J13337_1019930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	592	Open in IMG/M
3300001593\|JGI12635J15846_10747036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	562	Open in IMG/M
3300002245\|JGIcombinedJ26739_100098536	All Organisms → cellular organisms → Bacteria → Proteobacteria	2735	Open in IMG/M
3300002906\|JGI25614J43888_10116528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	696	Open in IMG/M
3300004080\|Ga0062385_11136684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	531	Open in IMG/M
3300004080\|Ga0062385_11171040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	524	Open in IMG/M
3300004104\|Ga0058891_1530025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	663	Open in IMG/M
3300005541\|Ga0070733_11150210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	520	Open in IMG/M
3300006174\|Ga0075014_100619216	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300006176\|Ga0070765_101404198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	658	Open in IMG/M
3300009029\|Ga0066793_10574544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	643	Open in IMG/M
3300009510\|Ga0116230_10014192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7841	Open in IMG/M
3300009510\|Ga0116230_10347639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1164	Open in IMG/M
3300009510\|Ga0116230_10385764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1092	Open in IMG/M
3300009524\|Ga0116225_1339244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	670	Open in IMG/M
3300009661\|Ga0105858_1046058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1114	Open in IMG/M
3300009683\|Ga0116224_10024124	All Organisms → cellular organisms → Bacteria → Proteobacteria	2995	Open in IMG/M
3300009709\|Ga0116227_11011521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	626	Open in IMG/M
3300009787\|Ga0116226_11908523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	540	Open in IMG/M
3300010379\|Ga0136449_103334589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	616	Open in IMG/M
3300010379\|Ga0136449_104488352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	513	Open in IMG/M
3300011120\|Ga0150983_13816870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	616	Open in IMG/M
3300011271\|Ga0137393_11369835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	596	Open in IMG/M
3300012363\|Ga0137390_11075132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	754	Open in IMG/M
3300012925\|Ga0137419_10456111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1008	Open in IMG/M
3300014168\|Ga0181534_10825400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	550	Open in IMG/M
3300014200\|Ga0181526_10884378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	562	Open in IMG/M
3300015052\|Ga0137411_1014483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	581	Open in IMG/M
3300017955\|Ga0187817_10005195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	7109	Open in IMG/M
3300017996\|Ga0187891_1200614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	681	Open in IMG/M
3300018009\|Ga0187884_10301388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	648	Open in IMG/M
3300018030\|Ga0187869_10501222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	576	Open in IMG/M
3300018037\|Ga0187883_10661330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	544	Open in IMG/M
3300020021\|Ga0193726_1032398	All Organisms → cellular organisms → Bacteria → Proteobacteria	2584	Open in IMG/M
3300020060\|Ga0193717_1140021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	723	Open in IMG/M
3300020581\|Ga0210399_10604424	Not Available	907	Open in IMG/M
3300020582\|Ga0210395_10803655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	701	Open in IMG/M
3300021170\|Ga0210400_10169088	Not Available	1767	Open in IMG/M
3300021178\|Ga0210408_11065687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	623	Open in IMG/M
3300021401\|Ga0210393_10670597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	846	Open in IMG/M
3300021404\|Ga0210389_10287443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1288	Open in IMG/M
3300021407\|Ga0210383_10950579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	730	Open in IMG/M
3300021475\|Ga0210392_10139260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1645	Open in IMG/M
3300021475\|Ga0210392_10413801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	984	Open in IMG/M
3300021479\|Ga0210410_10138021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2169	Open in IMG/M
3300021976\|Ga0193742_1116420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	890	Open in IMG/M
3300022531\|Ga0242660_1103391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	699	Open in IMG/M
3300025475\|Ga0208478_1030531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1077	Open in IMG/M
3300025494\|Ga0207928_1087439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	576	Open in IMG/M
3300026551\|Ga0209648_10650416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	577	Open in IMG/M
3300027528\|Ga0208985_1092488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	581	Open in IMG/M
3300027545\|Ga0209008_1031400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1234	Open in IMG/M
3300027545\|Ga0209008_1096270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	662	Open in IMG/M
3300027645\|Ga0209117_1162991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	577	Open in IMG/M
3300027676\|Ga0209333_1171661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	579	Open in IMG/M
3300027738\|Ga0208989_10170390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	727	Open in IMG/M
3300027795\|Ga0209139_10359185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	509	Open in IMG/M
3300027853\|Ga0209274_10727796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	511	Open in IMG/M
3300027860\|Ga0209611_10182331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1299	Open in IMG/M
3300027860\|Ga0209611_10460160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	720	Open in IMG/M
3300027862\|Ga0209701_10317187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	891	Open in IMG/M
3300027895\|Ga0209624_10151515	All Organisms → cellular organisms → Bacteria → Proteobacteria	1532	Open in IMG/M
3300028047\|Ga0209526_10956403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	516	Open in IMG/M
3300028572\|Ga0302152_10186869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	669	Open in IMG/M
3300028572\|Ga0302152_10324315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	508	Open in IMG/M
3300028773\|Ga0302234_10101155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1269	Open in IMG/M
3300028781\|Ga0302223_10093434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	998	Open in IMG/M
3300028783\|Ga0302279_10302917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	701	Open in IMG/M
3300028800\|Ga0265338_10544612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	813	Open in IMG/M
3300028801\|Ga0302226_10089526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1384	Open in IMG/M
3300028871\|Ga0302230_10314942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	606	Open in IMG/M
3300028877\|Ga0302235_10509840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	510	Open in IMG/M
3300029636\|Ga0222749_10402207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	726	Open in IMG/M
3300029910\|Ga0311369_10039425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5301	Open in IMG/M
3300029911\|Ga0311361_11160637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	623	Open in IMG/M
3300029913\|Ga0311362_10300859	Not Available	1675	Open in IMG/M
3300029914\|Ga0311359_10435907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1020	Open in IMG/M
3300029915\|Ga0311358_10774262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	692	Open in IMG/M
3300029915\|Ga0311358_10890507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	626	Open in IMG/M
3300029917\|Ga0311326_10469958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	617	Open in IMG/M
3300029917\|Ga0311326_10653784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	502	Open in IMG/M
3300029951\|Ga0311371_10034544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8960	Open in IMG/M
3300029952\|Ga0311346_10844757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	764	Open in IMG/M
3300029956\|Ga0302150_10149229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	891	Open in IMG/M
3300030043\|Ga0302306_10235480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	703	Open in IMG/M
3300030049\|Ga0302191_10316962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	571	Open in IMG/M
3300030399\|Ga0311353_10554882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1010	Open in IMG/M
3300030399\|Ga0311353_10627442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	936	Open in IMG/M
3300030503\|Ga0311370_12091213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	561	Open in IMG/M
3300030520\|Ga0311372_12126315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	650	Open in IMG/M
3300030646\|Ga0302316_10475094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	500	Open in IMG/M
3300030677\|Ga0302317_10050448	All Organisms → cellular organisms → Bacteria → Proteobacteria	2090	Open in IMG/M
3300030688\|Ga0311345_10496822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1050	Open in IMG/M
3300030688\|Ga0311345_11347609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	508	Open in IMG/M
3300030738\|Ga0265462_10979452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	723	Open in IMG/M
3300030739\|Ga0302311_10689679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	676	Open in IMG/M
3300030743\|Ga0265461_11154951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	792	Open in IMG/M
3300030847\|Ga0075405_10042271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	744	Open in IMG/M
3300030998\|Ga0073996_12123077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	538	Open in IMG/M
3300031047\|Ga0073995_10014322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	676	Open in IMG/M
3300031047\|Ga0073995_11914849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	518	Open in IMG/M
3300031057\|Ga0170834_110365491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	957	Open in IMG/M
3300031231\|Ga0170824_113659954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	977	Open in IMG/M
3300031234\|Ga0302325_12440026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	626	Open in IMG/M
3300031234\|Ga0302325_13150340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	528	Open in IMG/M
3300031236\|Ga0302324_101334762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	944	Open in IMG/M
3300031469\|Ga0170819_11379840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	835	Open in IMG/M
3300031524\|Ga0302320_10300221	All Organisms → cellular organisms → Bacteria → Proteobacteria	2135	Open in IMG/M
3300031708\|Ga0310686_102904426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1400	Open in IMG/M
3300031715\|Ga0307476_10268938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1247	Open in IMG/M
3300031754\|Ga0307475_10432661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1058	Open in IMG/M
3300032174\|Ga0307470_10021552	All Organisms → cellular organisms → Bacteria → Proteobacteria	2911	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.92%
Host-Associated	Host-Associated	7.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.19%
Aquatic	Environmental → Aquatic	9.73%
Plants	Host-Associated → Plants	7.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.10%
Peat	Environmental → Terrestrial → Peat	30.09%
Freshwater	Environmental → Aquatic → Freshwater	8.85%
Peat Moss	Host-Associated → Plants → Peat Moss	6.19%
Sediment	Environmental → Aquatic → Sediment	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.05%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	30.09%
Loam	Environmental → Terrestrial → Soil → Loam	13.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.85%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	6.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	30.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.96%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	6.19%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.77%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	15.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	14.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.50%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	6.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.77%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021976	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c1	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083086

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FA3_06456280	2170459023	Grass Soil	LPRKKAEATGVRIEGFTASELADVESALTWISQNKESPSADPA
JGI12637J13337_10199302	3300001137	Forest Soil	KKKAEATGVRIEGFTASELADLESALTWIAQNKESQSAEPAA*
JGI12635J15846_107470361	3300001593	Forest Soil	VRIEGFTASELADVESALTWIGQNKESQSAEPAA*
JGIcombinedJ26739_1000985361	3300002245	Forest Soil	GVRIEGFTASELADVESALTWISQNKESPNAEPA*
JGI25614J43888_101165281	3300002906	Grasslands Soil	LAKKKAEATGVRIEGFTASELADVESALTWISQNKEAPSSEPA*
Ga0062385_111366841	3300004080	Bog Forest Soil	RGLVWVHAVAAAELAKKKAEATGVRIDGFTASELADVESALTWISQNKESQGTDPA*
Ga0062385_111710402	3300004080	Bog Forest Soil	AELAKKKADSPGVRVQGFTASELADVESALTWIEQNKESAQKETV*
Ga0058891_15300251	3300004104	Forest Soil	VRRGLVWVHSVAAAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESQSADPA*
Ga0070733_111502103	3300005541	Surface Soil	AAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESAGADPA*
Ga0075014_1006192162	3300006174	Watersheds	LAKKKAEAPGVRIEGFTASELADVESALTWIAQNKESPGAGPAA*
Ga0070765_1014041982	3300006176	Soil	AKKKAEATGVRIEGFTASELADVESALTWISQNKESQSAEPA*
Ga0066793_105745442	3300009029	Prmafrost Soil	VRIEGFTASELADVESALTWIAQNKESQSSEPAA*
Ga0116230_100141928	3300009510	Host-Associated	AELARKKAAATGVRIEGFTAAELADVESALTWIEQNKESSTPEA*
Ga0116230_103476391	3300009510	Host-Associated	ELAKKRAEAPGVRIEGFTASELADVESALTWIEQKKQGKEGAE*
Ga0116230_103857642	3300009510	Host-Associated	VHAVAAAELAKKKAEATGVRIEGFTASELSDVESALTWIVQNKEAAGSDAGSASG*
Ga0116225_13392442	3300009524	Peatlands Soil	VWVHAVAGAELAKKKAEAPGVRIEGFTASELADVESALTWISQNKESQGSTPA*
Ga0105858_10460582	3300009661	Permafrost Soil	RRGLVWVHTVAAAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESASADPA*
Ga0116224_100241244	3300009683	Peatlands Soil	GAELAKKKAEAPGVRIEGFTASELADVESALTWISQNKESQGSTPG*
Ga0116227_110115212	3300009709	Host-Associated	LVWIHTVAAAELAKKRAEATGVRIEGFTASELADVESALTWIAQSKESPGSEPG*
Ga0116226_119085231	3300009787	Host-Associated	VWIHGVASAELAKKRAEAPGVRIEGFTASELADVESALTWIEQKKQGKEGAE*
Ga0136449_1033345891	3300010379	Peatlands Soil	VRTGQQQQKFTANVRRGLVWVHSVASAELAKKKAEATGVRIEGFTASELADVESALTWIGQNKEAPGSESA*
Ga0136449_1044883522	3300010379	Peatlands Soil	VWVHAVAGAELAKKKAEAPGVRIEGFTASELADVESALTWISQNKESQRSTPA*
Ga0150983_138168702	3300011120	Forest Soil	GVRIEGFTASELADVESALTWISQNKEAPGSEPA*
Ga0137393_113698352	3300011271	Vadose Zone Soil	WVHTVAAAELAKKKAEATGVRIEGFTASELADVESALTWITQNKESQSAEPAA*
Ga0137390_110751321	3300012363	Vadose Zone Soil	RGLVWVHTVAAAELAKKKAEATGVRIEGFTASELADVESALTWITQNKESQSAEPAA*
Ga0137419_104561112	3300012925	Vadose Zone Soil	ATGVRIEGFTASELADVESALTWIAQNKESQSSEPA*
Ga0181534_108254001	3300014168	Bog	TGVRIEGFTASELADVESALTWIAQNKEAPSSEPAA*
Ga0181526_108843781	3300014200	Bog	RGLVWVHAVAGAELAKKKAEAPGVRIEGFTASELADVESALTWISQNKESQGSAPG*
Ga0137411_10144831	3300015052	Vadose Zone Soil	KGGGDRGVRIEGFTASELADVESALTWIAQNKESPSPEAAS*
Ga0187817_100051952	3300017955	Freshwater Sediment	MTEEKQQKFTANVRRGLVWVHTGASAELAKKKAEATGVRIEGFTASELADVESALTWIGQNKESQSSNPA
Ga0187891_12006142	3300017996	Peatland	LAKKKAEATGVRIEGFTASELADVESALTWISQNKESSSSTPA
Ga0187884_103013881	3300018009	Peatland	GAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESSSSTPA
Ga0187869_105012222	3300018030	Peatland	HTVAAAELAKKKAEAPGVRIEGFTASELADVESALTWIGQNKQSQNADPA
Ga0187883_106613301	3300018037	Peatland	LVWVHSVASAELAKKKAEATGVRIEGFTASELADVESALTWIHQNKESNSAAPA
Ga0193726_10323983	3300020021	Soil	AEATGVRIEGFTASELADVESALTWISQNKESQSADPA
Ga0193717_11400211	3300020060	Soil	ELAKKKAEATGVRIEGFTASELADVESALTWISQNKESPSAEPAA
Ga0210399_106044241	3300020581	Soil	KKAEATGVRIEGFTASELADVESALTWITQNKESQSAEPHA
Ga0210395_108036551	3300020582	Soil	AAELAKKKAEATGVRLEGFTASELADVESALTWISQNKESKGADPA
Ga0210400_101690881	3300021170	Soil	AKKKAEATGVRIEGFTASELADVESALTWIAQNKESPSPEAAS
Ga0210408_110656872	3300021178	Soil	KKAEATGVRIEGFTASELADVESALTWIGQNKESPSSEPAA
Ga0210393_106705972	3300021401	Soil	AKKKAEATGVRIEGFTASELADVESALTWIAQNKESQSAEPAP
Ga0210389_102874431	3300021404	Soil	KKKAEATGVRIEGFTASELADVESALTWISQNKEEAGAPPA
Ga0210383_109505792	3300021407	Soil	TGVRLEGFTASELADVESALTWIAQNKESKSADPA
Ga0210392_101392601	3300021475	Soil	AAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESQSAEPA
Ga0210392_104138011	3300021475	Soil	LVWVHTVSAAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESQSADPA
Ga0210410_101380213	3300021479	Soil	EATGVRIEGFTASELADVESALTWISQNKESQSAEPA
Ga0193742_11164201	3300021976	Soil	AAAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESQSADPA
Ga0242660_11033911	3300022531	Soil	VAAAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESPSADPA
Ga0208478_10305312	3300025475	Arctic Peat Soil	LAKKKAETTGVRIEGFTAAELADVESALTWISQNKESPGSPSA
Ga0207928_10874392	3300025494	Arctic Peat Soil	LAKKKAEAPGVRIEGFTASELADVESALTWISQNKESPGSTSA
Ga0209648_106504162	3300026551	Grasslands Soil	ATGVRIEGFTASELADVESALTWISQNKEAVGSEPA
Ga0208985_10924881	3300027528	Forest Soil	GLVWVHSVAAAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESPSAADPA
Ga0209008_10314001	3300027545	Forest Soil	KAEATGVRIEGFTASELADVESALTWISQNKESPNAEPAA
Ga0209008_10962702	3300027545	Forest Soil	ATGVRIEGFTASELADVESALTWISQNKESQSADPA
Ga0209117_11629911	3300027645	Forest Soil	KKAEATGVRIEGFTASELADVESALTWISQNKEAPGSEPA
Ga0209333_11716611	3300027676	Forest Soil	AKKKAEATGVRIEGFTASELADVESALTWIGQNKESQTAEPAA
Ga0208989_101703902	3300027738	Forest Soil	GVRIEGFTASELADVESALTWIAQNKESQSAEPAA
Ga0209139_103591852	3300027795	Bog Forest Soil	TGVRIEGFTASELADVESALTWIAQNKESPSAEPAA
Ga0209274_107277962	3300027853	Soil	AEATGVRIEGFTASELADVESALTWISQNKESSTTPPA
Ga0209611_101823311	3300027860	Host-Associated	KAEATGVRIEGFTASELADVESALTWIAQNKESPGADPA
Ga0209611_104601601	3300027860	Host-Associated	KKAEATGVRIEGFTASELADVESALTWIAQNKESPSSEPAA
Ga0209701_103171871	3300027862	Vadose Zone Soil	ELAKKKAEATGVRIEGFTASELADVESALTWISQNKEAPGSEPA
Ga0209624_101515152	3300027895	Forest Soil	GVRIEGFTASELADVESALTWISQNKESPNAEPAA
Ga0209526_109564031	3300028047	Forest Soil	AEATGVRIEGFTASELADVESALTWIAQNKESHSAEPAP
Ga0302152_101868692	3300028572	Bog	VASAELARKKAAATGVRIEGFTAAELADVESALTWIEQNRDSASKDAT
Ga0302152_103243152	3300028572	Bog	KKAETTGVRIEGFTASELADVESALTWIEQNKESKSSENA
Ga0302234_101011552	3300028773	Palsa	KKKAEATGVRIEGFTASELADVESALTWISQNKEESGGAPAPSA
Ga0302223_100934341	3300028781	Palsa	ATGVRIEGFTASELADVESALTWIAQNKESSSAEPAA
Ga0302279_103029171	3300028783	Bog	VRRGLVWIHSVAGAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESSSSTPA
Ga0265338_105446121	3300028800	Rhizosphere	AEAPGVRIEGFTASELADVESALTWIAQNKEPKSGEPAE
Ga0302226_100895262	3300028801	Palsa	LVWVHSVAAAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESPSAESA
Ga0302230_103149421	3300028871	Palsa	EATGVRIEGFTASELADVESALTWIGQNKESKSSDPA
Ga0302235_105098402	3300028877	Palsa	EATGVRIEGFTASELADVESALTWISQNKEESGAPAA
Ga0222749_104022071	3300029636	Soil	VAAAELARKKADSPGVRVQGFTASELADVESALTWIAQNQDSTTPAE
Ga0311369_100394251	3300029910	Palsa	AELAKKKAEATGVRIEGFTASELADVESALTWIGQNKESKSSDPA
Ga0311361_111606371	3300029911	Bog	AATGVRIEGFTAAELADVESALTWIEQNKESIASEA
Ga0311362_103008591	3300029913	Bog	AAAELAKKKAEATGVRIEGFTASELADVESALTWIGQNKESKSSDPA
Ga0311359_104359072	3300029914	Bog	ARKKADSPGVRVQGFTASELADVESALTWIEQNQDSSKPAE
Ga0311358_107742621	3300029915	Bog	VAAAELAKKKAEAPGVRIEGFTASELADVESALTWISQNKESGGTAPA
Ga0311358_108905072	3300029915	Bog	KKKAEATGVRIEGFTASELADVESALTWIAQNKESQGAEPAA
Ga0311326_104699582	3300029917	Bog	ATGVRIEGFTASELADVESALTWIGQNKESKSSDPA
Ga0311326_106537842	3300029917	Bog	AAAELARKKADSPGVRVQGFTASELADVESALTWIEQNQDSSKPAE
Ga0311371_100345449	3300029951	Palsa	RGLVWVHSIAGAELAKKKAEATGVRIEGFTASELADVESALTWINQNKEESGAPAA
Ga0311346_108447571	3300029952	Bog	AELAKKKAEATGVRIEGFTASELADVESALTWISQNKESSSSTPA
Ga0302150_101492292	3300029956	Bog	KKAAATGVRIEGFTAAELADVESALTWIEQNRDSASKDAT
Ga0302306_102354801	3300030043	Palsa	VRRGLVWVHTVAAAELAKKKAEATGVRIEGFTASELADVESALTWIGQNKESKSSDPA
Ga0302191_103169622	3300030049	Bog	AEATGVRIEGFTAAELADVESALTWIAQNKEAHGSGSD
Ga0311353_105548821	3300030399	Palsa	KKAEATGVRIEGFTASELADVESALTWIAQNKESSSAEPAA
Ga0311353_106274422	3300030399	Palsa	AEATGVRIEGFTASELADVESALTWISQNKEESGAPAA
Ga0311370_120912132	3300030503	Palsa	KKAEATGVRIEGFTASELADVESALTWINQNKEESGAPAA
Ga0311372_121263151	3300030520	Palsa	EATGVRIEGFTASELADVESALTWIAQNKEASGSEPAA
Ga0302316_104750942	3300030646	Palsa	WVHSIASAELAKKKAEATGVRIEGFTASELADVESALTWISQNKEESGSAPAPSA
Ga0302317_100504481	3300030677	Palsa	ASAELAKKKAEATGVRIEGFTASELADVESALTWISQNKEESGSAPAPSA
Ga0311345_104968221	3300030688	Bog	LARKKADSPGVRVQGFTASELADVESALTWIEQNQDSSKPAE
Ga0311345_113476091	3300030688	Bog	TGVRIEGFTASELADVESALTWIGQNKESKSSDPA
Ga0265462_109794522	3300030738	Soil	VAAAELARKKADSPGVRVQGFTASELADVESALTWIAQNQDATTPAE
Ga0302311_106896791	3300030739	Palsa	HSVANAELAKKKAEATGVRIEGFTASELADVESALTWISQNKEESGAPAA
Ga0265461_111549512	3300030743	Soil	RKKADSPGVRVQGFTASELADVESALTWIAQNQDATTPAE
Ga0075405_100422711	3300030847	Soil	VAAAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESPSAEPAA
Ga0073996_121230771	3300030998	Soil	EATGVRIEGFTASELADVESALTWISQNKEAPGSEPA
Ga0073995_100143221	3300031047	Soil	TVAAAELSKKKAEATGVRIEGFTASELADVESALTWISQNKESQSADPA
Ga0073995_119148491	3300031047	Soil	ELAKKKAEATGVRIEGFTASELADVESALTWISQNKESQSADPA
Ga0170834_1103654912	3300031057	Forest Soil	VRRGLVWVHSVASAELAKKKAEATGVRIEGFTASELADVESALTWIGQNKESKSEPAA
Ga0170824_1136599542	3300031231	Forest Soil	VHSVASAELAKKKAEATGVRIEGFTASELADVESALTWIGQNKESKSAEPAAQA
Ga0302325_124400262	3300031234	Palsa	RRGLVWVHGIASAELAKKKAEATGVRIEGFTASELADVESALTWINQNKEESGAPAA
Ga0302325_131503402	3300031234	Palsa	VASAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESNNAAPT
Ga0302324_1013347622	3300031236	Palsa	WVHSIAGAELAKKKAEATGVRIEGFTASELADVESALTWISQNKEESGAPAA
Ga0170819_113798401	3300031469	Forest Soil	VVSAELAKKKAEATGVRIEGFTASELADVESALTWISQNKEAPGSEPAA
Ga0302320_103002211	3300031524	Bog	KKAEATGVRIEGFTASELADVESALTWIAQNKEAKAEEAQA
Ga0310686_1029044261	3300031708	Soil	EATGVRIEGFTASELADVESALTWISQNKESQSTDPA
Ga0307476_102689381	3300031715	Hardwood Forest Soil	RRGLVWVHSVAAAELAKKKAEATGVRIEGFTASELADVESALTWISQNKESPSADPA
Ga0307475_104326611	3300031754	Hardwood Forest Soil	AKKKAEATGVRIEGFTAAELADVESALTWIAQNKETKSSEPAA
Ga0307470_100215521	3300032174	Hardwood Forest Soil	EATGVRIEGFTASELADVESALTWIAQNKESPSPEAAS

Hidden Markov Model


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