Metagenome / Metatranscriptome Family F083097

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083097
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	72 residues
Representative Sequence	MKRHALFFSTFTAVMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNRQLVGD
Number of Associated Samples	98
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.12 %
% of genes near scaffold ends (potentially truncated)	96.46 %
% of genes from short scaffolds (< 2000 bps)	98.23 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.212 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.434 % of family members)
Environment Ontology (ENVO)	Unclassified (34.513 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.938 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 25.51% β-sheet: 2.04% Coil/Unstructured: 72.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00496	SBP_bac_5	2.65
PF04392	ABC_sub_bind	1.77
PF01035	DNA_binding_1	1.77
PF02683	DsbD	1.77
PF03401	TctC	0.88
PF01145	Band_7	0.88
PF01734	Patatin	0.88
PF12695	Abhydrolase_5	0.88
PF00903	Glyoxalase	0.88
PF06707	DUF1194	0.88
PF00027	cNMP_binding	0.88
PF05726	Pirin_C	0.88
PF00069	Pkinase	0.88
PF02518	HATPase_c	0.88
PF08734	GYD	0.88
PF13767	DUF4168	0.88
PF03928	HbpS-like	0.88
PF14247	DUF4344	0.88
PF01545	Cation_efflux	0.88
PF03466	LysR_substrate	0.88
PF17200	sCache_2	0.88
PF12441	CopG_antitoxin	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.54
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	1.77
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.77
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	1.77
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.88
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.88
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.88
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.88
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.88
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.88
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.88
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.88
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.21 %
Unclassified	root	N/A	47.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.21 %
Unclassified	root	N/A	47.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.21 %
Unclassified	root	N/A	47.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.19 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.58 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.42 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	3.54 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.88 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.54 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.77 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.88 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	5.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.54 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.77 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.88 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.88 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.88 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.54 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	1.77 %
Paludibaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum	0.88 %
Aliidongia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia	0.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.88 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.88 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.88 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.54 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.88 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.88 %
Aliidongia dinghuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	0.88 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.88 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.88 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.88 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.88 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.54 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.88 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	0.88 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.88 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.88 %
Aliidongia dinghuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	0.88 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.88 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.88 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.54 %
Sinorhizobium meliloti SM11	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti → Sinorhizobium meliloti SM11	0.88 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.88 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.88 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.88 %
Aliidongia dinghuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	0.88 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.88 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.88 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105608428	Not Available	1204	Open in IMG/M
3300002907\|JGI25613J43889_10034266	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300003999\|Ga0055469_10306101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	515	Open in IMG/M
3300005436\|Ga0070713_101466625	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300005561\|Ga0066699_10479413	Not Available	890	Open in IMG/M
3300005618\|Ga0068864_102411668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300005764\|Ga0066903_101356677	Not Available	1333	Open in IMG/M
3300006174\|Ga0075014_100254624	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300006800\|Ga0066660_11075101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300006844\|Ga0075428_101173420	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300007788\|Ga0099795_10078159	Not Available	1261	Open in IMG/M
3300009012\|Ga0066710_104111464	Not Available	544	Open in IMG/M
3300009038\|Ga0099829_11509410	Not Available	555	Open in IMG/M
3300009098\|Ga0105245_13120408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300009143\|Ga0099792_10240961	Not Available	1048	Open in IMG/M
3300009156\|Ga0111538_10481979	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1572	Open in IMG/M
3300009523\|Ga0116221_1137506	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300009792\|Ga0126374_10184320	Not Available	1304	Open in IMG/M
3300010047\|Ga0126382_11727151	Not Available	585	Open in IMG/M
3300010159\|Ga0099796_10153815	Not Available	907	Open in IMG/M
3300010336\|Ga0134071_10482391	Not Available	639	Open in IMG/M
3300010359\|Ga0126376_10889045	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300010360\|Ga0126372_11004396	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300010362\|Ga0126377_13347237	Not Available	518	Open in IMG/M
3300010376\|Ga0126381_103120056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	656	Open in IMG/M
3300010376\|Ga0126381_105032014	Not Available	507	Open in IMG/M
3300010398\|Ga0126383_10895517	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300011270\|Ga0137391_11545602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	508	Open in IMG/M
3300011442\|Ga0137437_1313655	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012189\|Ga0137388_10904184	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300012202\|Ga0137363_11212826	Not Available	641	Open in IMG/M
3300012202\|Ga0137363_11488748	Not Available	568	Open in IMG/M
3300012205\|Ga0137362_10711195	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300012205\|Ga0137362_11712010	Not Available	516	Open in IMG/M
3300012208\|Ga0137376_10727373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300012212\|Ga0150985_102732501	Not Available	512	Open in IMG/M
3300012212\|Ga0150985_109568996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	690	Open in IMG/M
3300012357\|Ga0137384_10236963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1523	Open in IMG/M
3300012357\|Ga0137384_10584274	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300012359\|Ga0137385_11253277	Not Available	604	Open in IMG/M
3300012359\|Ga0137385_11550468	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012361\|Ga0137360_10438583	Not Available	1105	Open in IMG/M
3300012361\|Ga0137360_11742622	Not Available	528	Open in IMG/M
3300012362\|Ga0137361_11157055	Not Available	695	Open in IMG/M
3300012362\|Ga0137361_11678830	Not Available	555	Open in IMG/M
3300012685\|Ga0137397_10848052	Not Available	678	Open in IMG/M
3300012917\|Ga0137395_10522451	Not Available	855	Open in IMG/M
3300012923\|Ga0137359_10711032	Not Available	875	Open in IMG/M
3300012924\|Ga0137413_10447185	Not Available	940	Open in IMG/M
3300012924\|Ga0137413_10658068	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300012924\|Ga0137413_10676241	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300012927\|Ga0137416_10865472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	802	Open in IMG/M
3300012931\|Ga0153915_10911191	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300012944\|Ga0137410_10438078	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300012948\|Ga0126375_11263859	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	618	Open in IMG/M
3300012971\|Ga0126369_10864642	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300013297\|Ga0157378_11381015	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	747	Open in IMG/M
3300014262\|Ga0075301_1122111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	583	Open in IMG/M
3300014657\|Ga0181522_10511393	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300015242\|Ga0137412_10292223	Not Available	1280	Open in IMG/M
3300015373\|Ga0132257_103199674	Not Available	596	Open in IMG/M
3300016294\|Ga0182041_12330164	Not Available	501	Open in IMG/M
3300016319\|Ga0182033_10608507	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300016387\|Ga0182040_11970674	Not Available	501	Open in IMG/M
3300016445\|Ga0182038_10207057	Not Available	1548	Open in IMG/M
3300016445\|Ga0182038_10238220	All Organisms → cellular organisms → Bacteria → Proteobacteria	1455	Open in IMG/M
3300017927\|Ga0187824_10183336	Not Available	706	Open in IMG/M
3300017942\|Ga0187808_10069684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1507	Open in IMG/M
3300018062\|Ga0187784_10544295	Not Available	934	Open in IMG/M
3300018084\|Ga0184629_10039786	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
3300018482\|Ga0066669_12090085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300018482\|Ga0066669_12189368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	524	Open in IMG/M
3300019248\|Ga0180117_1248078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	552	Open in IMG/M
3300020579\|Ga0210407_10600471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti → Sinorhizobium meliloti SM11	858	Open in IMG/M
3300020580\|Ga0210403_10060998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3021	Open in IMG/M
3300021171\|Ga0210405_10132265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1974	Open in IMG/M
3300021171\|Ga0210405_10484588	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300021178\|Ga0210408_11354085	Not Available	538	Open in IMG/M
3300021479\|Ga0210410_11263522	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	630	Open in IMG/M
3300021560\|Ga0126371_12662190	Not Available	606	Open in IMG/M
3300022530\|Ga0242658_1236878	Not Available	511	Open in IMG/M
3300025928\|Ga0207700_11784502	Not Available	541	Open in IMG/M
3300025929\|Ga0207664_11020832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	741	Open in IMG/M
3300025930\|Ga0207701_10424311	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300025960\|Ga0207651_11324893	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300026377\|Ga0257171_1077681	Not Available	584	Open in IMG/M
3300026482\|Ga0257172_1088911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	567	Open in IMG/M
3300027874\|Ga0209465_10202976	Not Available	989	Open in IMG/M
3300027882\|Ga0209590_10944111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300027903\|Ga0209488_10217978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1436	Open in IMG/M
3300027903\|Ga0209488_11003675	Not Available	577	Open in IMG/M
3300028884\|Ga0307308_10367004	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300031122\|Ga0170822_12644354	Not Available	541	Open in IMG/M
3300031573\|Ga0310915_10451079	Not Available	914	Open in IMG/M
3300031679\|Ga0318561_10836237	Not Available	506	Open in IMG/M
3300031681\|Ga0318572_10932112	Not Available	516	Open in IMG/M
3300031765\|Ga0318554_10176811	All Organisms → cellular organisms → Bacteria → Proteobacteria	1214	Open in IMG/M
3300031768\|Ga0318509_10331625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300031821\|Ga0318567_10888227	Not Available	505	Open in IMG/M
3300031896\|Ga0318551_10658875	Not Available	606	Open in IMG/M
3300031912\|Ga0306921_11146181	Not Available	869	Open in IMG/M
3300031945\|Ga0310913_11293458	Not Available	506	Open in IMG/M
3300031946\|Ga0310910_10316108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1230	Open in IMG/M
3300031954\|Ga0306926_12373421	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	585	Open in IMG/M
3300032064\|Ga0318510_10344090	Not Available	628	Open in IMG/M
3300032076\|Ga0306924_12503018	Not Available	518	Open in IMG/M
3300032076\|Ga0306924_12623230	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	502	Open in IMG/M
3300032090\|Ga0318518_10681412	Not Available	523	Open in IMG/M
3300032174\|Ga0307470_11921532	Not Available	504	Open in IMG/M
3300032893\|Ga0335069_10633889	Not Available	1223	Open in IMG/M
3300033289\|Ga0310914_10184461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1858	Open in IMG/M
3300033290\|Ga0318519_10715091	Not Available	613	Open in IMG/M
3300033486\|Ga0316624_11454114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	629	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.04%
Host-Associated	Host-Associated	7.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.07%
Aquatic	Environmental → Aquatic	7.96%
Plants	Host-Associated → Plants	7.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.07%
Freshwater	Environmental → Aquatic → Freshwater	4.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.54%
Sediment	Environmental → Aquatic → Sediment	2.65%
Marine	Environmental → Aquatic → Marine	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.11%
Loam	Environmental → Terrestrial → Soil → Loam	4.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.89%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1056084281	3300000364	Soil	MKHQALFFGIFTAAVVAVPTFAADGAPDMFGHRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANAGRLVGDYNNPVL
JGI25613J43889_100342661	3300002907	Grasslands Soil	MKRHALFFSTFTAVMLALPAFATDGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNRQLVGDYRNPIL
Ga0055469_103061011	3300003999	Natural And Restored Wetlands	MQRQALFVSVFTAATMALPAFAADDSSAMMNVRWGKNAFNFESMPSGPKPLRNLTRRPDGTANAGQLVGDYRNPILTPEA
Ga0070713_1014666252	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKRRAVFFSALAGVMLTGPTLAADGAAGMLELRWGKNAFNFEGMPSGPQPLKNLSRLPSGKANAGRL
Ga0066699_104794131	3300005561	Soil	MKRQALFLSVFAATMVALPAFAADGAEGMIGFRWGKNAFNFEPMPSGPQPLRNLSRRPDGTANAGQLVGD
Ga0068864_1024116682	3300005618	Switchgrass Rhizosphere	MKRQAVFFSAFTAAMLAWPAFAADGVPGMMGLRWGKNAFNFEGMPSGPQPLRNLSRRPDGTSNAGQLVGDYRNPILT
Ga0066903_1013566771	3300005764	Tropical Forest Soil	MKRQALFFSAFTAVMFALPAFAADGGAGILQLRWGKNAFNFEGMPSGPQPLRNLTRLPNGKANARQLVGDYRNPILT
Ga0075014_1002546243	3300006174	Watersheds	MKRQVLFFGIFASAAFGSSAAVADGAAGIMGFRWGKNAFNFEPMPSGPQPLRNLRRRADGTGNAAQL
Ga0066660_110751011	3300006800	Soil	MKRQALFFSTFTAVMLTLPAFAADGASGILAVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANAREL
Ga0075428_1011734201	3300006844	Populus Rhizosphere	MNRQALFLGIFTAAILATPVLAADAASEMLSVRWGKNVFNFEDMPSGPQPPRNLSRRPDGTANA
Ga0099795_100781593	3300007788	Vadose Zone Soil	MKRYALFFSTFTAVMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNR
Ga0066710_1041114641	3300009012	Grasslands Soil	MKRQALFLSIFAAAMLALPALAAHGAEGMMGFRWCKNAFNFESMPSGPQPLKNLSRRPDGTTNAGQPDDDHQNPTLTP
Ga0099829_115094102	3300009038	Vadose Zone Soil	MKRQALFFSIFAAMFTLPAFAADGASGITGVRWGKNAFNFEPMPSGPQPLRNMSRRADGTGNAGQLAGDYRNPILTP
Ga0105245_131204081	3300009098	Miscanthus Rhizosphere	MKRQAVFFSAFTAAMLAWPAFAADGVPGMMGLRWGKNAFNFEGMPSGPQPLRNLSRRPDGTSNAGQLVG
Ga0099792_102409611	3300009143	Vadose Zone Soil	MKRHALFFSTFTAVMLALPAFAADDASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNG
Ga0111538_104819793	3300009156	Populus Rhizosphere	MKRQALFLGIASAVILASPAFAADGVSAMIGVRWGKNAFNFEGMPSGPQPLRNLSRRPDGTANAGQLVGDYNNPILT
Ga0116221_11375063	3300009523	Peatlands Soil	MKREALFLSASTAAMLASVLAWPAFGADGAPGMMEVRWGKNAFNFEPMPSGPQPLRNLTRRPDGTA
Ga0126374_101843201	3300009792	Tropical Forest Soil	MKRQLLFFSTLTAVMLTQPTFAADGAAGMLQVRWGKNAFNFEGMPSGPQPLRNLSRLPN
Ga0126382_117271512	3300010047	Tropical Forest Soil	MKRQLLFFSMFTALILTQPTFAAAGASGILEVRWGKNAFNFEGMPSGPQPLRNLSRVFTRTEAR*
Ga0099796_101538152	3300010159	Vadose Zone Soil	MKRYALFFSTFTAVMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKAN
Ga0134071_104823912	3300010336	Grasslands Soil	MKSQALLFSIFSAVMLTQPTFAADGVSGILEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKADARQLV
Ga0126376_108890451	3300010359	Tropical Forest Soil	MKRQVLLFSTFAAVMLTQTAFAADGAPGILDVRWGKNAFNFEGMPTGPQPLRNLSRLPNGKANARELVGDYRNPVLTP
Ga0126372_110043962	3300010360	Tropical Forest Soil	MKRQVLLFSTITVLMLTQPTFAADGASAMLEVRWGKNAFNFEGMPSGPQPLRNLNRLPNGKANARQLVGDYRNPILTSEAAAVVKQ
Ga0126377_133472372	3300010362	Tropical Forest Soil	MNRQALFLTVFTAAMLTAPAFAADAASVMLGVRWGKNVFNFEDMPSGPKPLRNLRRRPDGTANA
Ga0126381_1031200562	3300010376	Tropical Forest Soil	MKRQALFFSIFGVTMVTMPAFAADGASGITGVRWGKNAFNFEPMPSGPQPLRNLIRRPDGTGNAG
Ga0126381_1050320141	3300010376	Tropical Forest Soil	MKRQGLFFSTVAAMMLTLPAFATDSESGMMVVRWGKNAFNFEGMPSGAQPLRNLSRLPNGKAN
Ga0126383_108955171	3300010398	Tropical Forest Soil	MKHQALFLSIFVAGMFNLPAFAADGASGITGVRWGKNAFNFEPMPSGPQPLRNLMRRPDGTGNAGQLV
Ga0137391_115456021	3300011270	Vadose Zone Soil	MKRQAVYFSVFTAAMLALPAYAADGAPAMMGFRWGKNAFSFEGMPSGPQPLRNLSRRPDGKANAGQLVGDYNNPILTPEAT
Ga0137437_13136551	3300011442	Soil	MKRQALFFSVITTAMFACPAFAADGAPGMMEFRWGKNAFNFEGMPSGPQPLRNLSRRPDGTAEA
Ga0137388_109041842	3300012189	Vadose Zone Soil	MKRHALFFSTFTAVMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNRQLVGDYRNPILT
Ga0137363_112128262	3300012202	Vadose Zone Soil	MKRDALFFSTLTAVMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLHNSSRLPNGKANNRQLVGD
Ga0137363_114887481	3300012202	Vadose Zone Soil	MKRQALFFSIFAAAMFTLPAFAADDTSGITGVRWGKNAFNFEPMPSGPQPLRNTSRRADGTGNAGQ
Ga0137362_107111952	3300012205	Vadose Zone Soil	MKRHALFFSTFTAVMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNR
Ga0137362_117120102	3300012205	Vadose Zone Soil	MKRQALLLSAFSAAILTLPAFADDGASGILGFRWGKNVFNFEGMPSGPQPLRNLSRLPNGKANNGRLVGDYHNP
Ga0137376_107273731	3300012208	Vadose Zone Soil	MKRQALFFSVFTAALLALPALAADGAAGMMQVRWGKNAFNFEGMPSGPQPLRNLSRRPDGTANAGQLVGDYKNP
Ga0150985_1027325011	3300012212	Avena Fatua Rhizosphere	MKRHALFFSVLATTMLALPALAADGAEGMIGVRWGKNVFYLEPMPSGPQPPRNLSRRPNGTSDAAQLVGDYHNPILTPQLQLL*
Ga0150985_1095689962	3300012212	Avena Fatua Rhizosphere	MKRHALFLTGFAATTLAMPAFAADSMIGFRWGKTAFNFEPMPSGAQPLSNLSRLPNGTSNAGQLVGDYHNPIL
Ga0137384_102369631	3300012357	Vadose Zone Soil	MKRQTLFLSAFTAAILTLPAFADDGASGILGFRWGKNVFNFEGMPSGPQPLRNLSRLPNGKANNGRLV
Ga0137384_105842741	3300012357	Vadose Zone Soil	MRWRELSTLLGGLVMSAFTAAILTLPAFAEDAGILGFRWGKNVLNFEGMPSGPQPLRNLSRLPNGKANNGRLVGDYHNPILTPQAAAI
Ga0137385_112532772	3300012359	Vadose Zone Soil	MKRQALFFSTITVLMLTQSTFAADGASSILEVRWGKNAFNFEGMPSGPQPLRNLNRLPDGKANARQLVGDYRNPILTPEAAAIV
Ga0137385_115504681	3300012359	Vadose Zone Soil	MKRQTLFLSAFTAAILTLPAFADDGASGILGFRWGKNVFNFEGMPSGPQPLRNLSRLPNGTANNGRLVGDYHNP
Ga0137360_104385832	3300012361	Vadose Zone Soil	MKRHALFFGTFTAVMLALPAFAADGASGLMEGRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNRQLVGDYRNPIL
Ga0137360_117426222	3300012361	Vadose Zone Soil	MKRYALFFSTFTTVMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNRQLVGDYLNSILTPEAA
Ga0137361_111570552	3300012362	Vadose Zone Soil	MKRHALFFSTFTAVMLALPAFAADRASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNR
Ga0137361_116788301	3300012362	Vadose Zone Soil	MKRHALCLSTFTAVMLALPAFAADGASGLMEGRWGKNAFNFEGMPSGPQPLRNLSRLPNGKAN
Ga0137397_108480522	3300012685	Vadose Zone Soil	MKRQALFFSIFAAATFTLPAFAADDASGITGARWGKNAFNFEPMPSGPQPLRNMSRRADGTGNAGQLVGDYHNP
Ga0137395_105224512	3300012917	Vadose Zone Soil	MKRYALFFSTFTAVMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNRQLA
Ga0137359_107110322	3300012923	Vadose Zone Soil	MKRQALFFSTFTVVMLTLPAFATDDVSAIMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANAGQLVGDFR
Ga0137413_104471851	3300012924	Vadose Zone Soil	MKRQALLLSAFSAAILTLPAFADDGASAILGFRWGKNVFNFEGMPSGPQPLRNLSRLPNGKANNGRLVGD
Ga0137413_106580682	3300012924	Vadose Zone Soil	MNRYALFFSTFTAVMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNRQLVGD
Ga0137413_106762411	3300012924	Vadose Zone Soil	MKRHALFFSTFTAVMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNRQLVGD
Ga0137416_108654721	3300012927	Vadose Zone Soil	MKRQALFFSIFAAATFTLPAFAADGASGITGVRWGKNAFNFEPMPTGPQPLRNLRRRPDGTGNAGQLVGDYLNPILTAAA
Ga0153915_109111911	3300012931	Freshwater Wetlands	MKRQALLFSIFTAGMLALPAFAAASQMTGFRWGKNAFNFEPMPSGPRPLRNLMRRPDGTANAGQLVGDYRNP
Ga0137410_104380782	3300012944	Vadose Zone Soil	MKRQALFVSVFTAALFAVPAFAADGAAGMMELRWGKNAFNFEGMPSGPQPLRNLSRRSDGTANAGQLVGDYKNPILT
Ga0126375_112638592	3300012948	Tropical Forest Soil	MKRQALFLSAVAMAMFTVPAFSADGAPDMFNVRWGKNAFNFEGMPTGPQPLRNLSRLPNGKANAGRLVGDYNNPI
Ga0126369_108646421	3300012971	Tropical Forest Soil	MKRQALFLSIFAAAMFNLPAFAADGASGVTGVRWGKNAFNFEPMPSGPQPLRNLMRRPDGTGNAGQLVGDYHNPILQPEA
Ga0157378_113810152	3300013297	Miscanthus Rhizosphere	MKRQAVFFSAFTAAMLAWPAFAADGVPGMMGLRWGKNAFNFEGVPSGPQPLRNLSRRPDGTSNAGQLVGDYRKAEPVEFGNAFE
Ga0075301_11221111	3300014262	Natural And Restored Wetlands	MKRQALFLGIVTAAMLALPALAADGAPGMLGLRWGKNAFNFEGQPTGAQPLRNLSRRPDGTAN
Ga0181522_105113932	3300014657	Bog	MRPRAQFIITVFVITVAAATLALPAFAEDSGMLGYWWGKNVFNFEPMPSGPKPILNLSRRPDGKANNGRLVGDWHNPILTPQAAAALK
Ga0137412_102922231	3300015242	Vadose Zone Soil	MKRQALLLSAFSAAILTLPAFADDGASAILGFRWGKNVFNFEGMPSGPQPLRNLSRLPNGKANNGRLVGDYHNPILTP
Ga0132257_1031996741	3300015373	Arabidopsis Rhizosphere	MKRQALFLSVFTAAMLALPVLAADGAPGMFNVRWGKNAFNFEGMPSGAQPLRNLSRRPDGTANAGQLVGDYNN
Ga0182041_123301642	3300016294	Soil	MKRQALFFSIFATTVLALPALAADGASGITGVRWGKNAFNFEPMPSGPQPLRNLRRRPDGTGN
Ga0182033_106085071	3300016319	Soil	MKRQALFFSTFTAMVLALPAFAADGAPGMFEVRWGKNAFNFEGMPSGPQPLRNLSRLPSGKANAGRLVGDYRNPILTP
Ga0182040_119706741	3300016387	Soil	MKRQALFAITVAAAMLSLPAFADDGDGILGYRWGKNVFNFEPMPSGPQPLRNLSRLANGKANNGRLVGDWHNPILTPQAAAIVKAK
Ga0182038_102070574	3300016445	Soil	MKRRALFFSTFTGVMLVLPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLIRLPNGKSNNRQLVGDYRNPIL
Ga0182038_102382201	3300016445	Soil	MKRQALFAITVAASMLALPAFADDGASGILGYRWGKNVFNFEPMPSGPQPLRNLSRLANGKANNGRLVGDWHNPILTPQAAAIVKAK
Ga0187824_101833361	3300017927	Freshwater Sediment	MTRQSLFFGIIAAAAVALPAVAADEGSAMLNYRWGKNAFNFEGMPSGPQPLKNLSRLPNGKANAGRL
Ga0187808_100696844	3300017942	Freshwater Sediment	MKRQVAFLTIFAFLTVPVFAADGVSGITGVRWGKNTFYFEPMPSGPQPLRNLIRRPNGTGNVNQLVGDYRN
Ga0187784_105442951	3300018062	Tropical Peatland	MKRQALWFGILAAATPALPAFTAEGTSGMMDVRWGKNAFNFEGMPSGPQPLKNLSRRPDGKANAGRLVGDYRNPILTPEAAA
Ga0184629_100397864	3300018084	Groundwater Sediment	MNRQALFLGMFTAAIVATPVFAADAASEMLSVRWGKNVFNFEDMPSGPQPPRNLSRRPDGTANAGRLVGDYRNPIL
Ga0066669_120900852	3300018482	Grasslands Soil	MKRQAVFLNVFAATMLALPAVAADGAEGVIGFRWGKNAFNFEPMPSGPQPLRNLSRRPDGTANAGQLVGDY
Ga0066669_121893682	3300018482	Grasslands Soil	MKRQALFFSVFTTAMLALPTFAADGAPGMMGLRWGKNAFNFEGMSSGPQPLRNLSRRPDGTAEAGRLVGDYNNPILTPEAAS
Ga0180117_12480782	3300019248	Groundwater Sediment	MKRHALFLGIFASAMLAVPTFAADGVPGIFGVRWGKNVFNFENMPSGPQSLRNLSRRPDGTGNAGQLVGDYNNPILTPRAASVV
Ga0210407_106004712	3300020579	Soil	MKRQALFLSAFTVAILTLPAFADDGASGILGFRWGKNVFNFEGMPSGPQPLRNLSRLPNG
Ga0210403_100609981	3300020580	Soil	MKRQALFLSAFTVAILTLPAFADDGASGILGFRWGKNVFNFEGMPSGPQPLRNLSRLPNGKANNGRLVGDYHNPVLTPEAAAV
Ga0210405_101322651	3300021171	Soil	MKRQGLFFSVFTTAMLAWPAFAADGVPGMMEVHWGKNAFNFEGMPSGPQPLKNLSRLPNGKANA
Ga0210405_104845881	3300021171	Soil	MKCQALFLSAFTAAILTLPAFADDGASGILGFRWGKNVFNFEGMPSGPQPLRNLSRLPNGKANNGRLVGDYHNPIL
Ga0210408_113540851	3300021178	Soil	MKRRAVFFSALAGVMLTGPALAADGAAGMLELRWGKNAFNFEGMPSGPQPLRNLSRLPDGKANAGRLVGDYRNPILTPEAAAV
Ga0210410_112635221	3300021479	Soil	MKRQTLFLSVFTAAILTLPAFADDSASGILGFRWGKNVFNFEGLPSGPQPLRNLSRLPNGKANNGRLVGDSRNPIL
Ga0126371_126621902	3300021560	Tropical Forest Soil	MKRQALFCSTVTAVMLTLPVLAADGGSGMMEIRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANAGQLVGDFR
Ga0242658_12368781	3300022530	Soil	MKRHALFFSTFTAGMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNRYLVGDYRNPIL
Ga0207700_117845021	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MNRQTLVFGLFTAATLALPAFAADGTPDMFGHRFGKNAFNFEGMPSGPQPLRNLSRLPNG
Ga0207664_110208321	3300025929	Agricultural Soil	MTRQSLLFGIFAAAVLAVPAVAADDQSAMLNYRWGKNAFNFEGMPSGPQPLKNLSRLPSGKANAGRLVGDYNNPILTPYAA
Ga0207701_104243111	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKRHALFLGIASAIILTSPAFAADGVSAMIGVRWGKNAFNFEGMPSGPQPLRNLSRRPDGTANAGQLVGDYNNPILTREAAA
Ga0207651_113248931	3300025960	Switchgrass Rhizosphere	MKRHALFLGIASAIILTSPAFAADGVSAMIGVRWGKNAFNFEGMPSGPQPLRNLSRRPDGTA
Ga0257171_10776811	3300026377	Soil	MKRQALFFSIFAASIFTVPAFAADDASGITGVRWGKNAFNFEPMPSGPQPLRNMSRRADGTGNAGQLVGDYHNPILTAAAA
Ga0257172_10889112	3300026482	Soil	MKRRALFFSTFTAVMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNRRLVGDYRNPILTPEAAVVV
Ga0209465_102029762	3300027874	Tropical Forest Soil	MKCQAQFFSIFAAAMLTLPAFAADGASGITGVRWGKNAFNFEPMSSGPQPLRNLSRRPDGTGNAT
Ga0209590_109441111	3300027882	Vadose Zone Soil	MKRQALFLSIFAAAMLAVPAFAADGAEGMMGFRWGKNTFNFEPMPSGPQPLRNLSRRPDGTANAGQLVGDYHNPILTPEAAA
Ga0209488_102179781	3300027903	Vadose Zone Soil	MKRYALFFSTFTAVMLALPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKA
Ga0209488_110036752	3300027903	Vadose Zone Soil	MKRQALFFSIFAATFTLPAFAADDASGITGVRWGKNAFNFEPMPEGPQPLRNLRRRPDGTGNAGQLVG
Ga0307308_103670042	3300028884	Soil	MKRQALFLSVFAAAMLALPAVAADGAEGMIGFRWGKNAFNFEPMPSGPQPLRNLSRRPDGTANAGQLVGDSAIRFSRPKPRPS
Ga0170822_126443542	3300031122	Forest Soil	MKRHALCFSTFTAVMLASPAFAADGASGLMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANNRYLVGDYRNP
Ga0310915_104510792	3300031573	Soil	MKRRALFLGTFAGIVLALPAYAGEGATGILQARWGKNAFNFEGMPSGPQPLRNLSRLPNGKA
Ga0318561_108362371	3300031679	Soil	MKRRARFLGTFAGIMLALPAYAGEGAQGMLQVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANAGRLVGDYHNPILTPAAAAIVK
Ga0318572_109321121	3300031681	Soil	MKRQALFAITVAAAMLALPAFADDGASGILGYRWGKNVFNFEPMPSGPQPLRNLSRLANGKANNGRLVGDWHNPILTPQAAA
Ga0318554_101768112	3300031765	Soil	MKRRAVFFSALAGVMLTGPALAADGAAGMLELRWGKNAFNFEGMPSGPQPLRNLSRLPDGKANAGRLVG
Ga0318509_103316252	3300031768	Soil	MKRQALFAITVAAVMLALPAFADDGASGILGYRWGKNVFNFEPMPSGPQPLRNLSRLANGKANNGRLVGDWHNPI
Ga0318567_108882271	3300031821	Soil	MKRQALFFTIFAAAMLSLSASAADGASGIMGIRWGKNAFNFEPMSSGPQPLRNLSRRPDGTGNATQ
Ga0318551_106588751	3300031896	Soil	MKRRAVLFSAFAAAILTVPAFAADGAAGMLGLRWGKNAFNFEGMPSGPQPLRNLSRLPDGKAN
Ga0306921_111461812	3300031912	Soil	MKRQALFFGTFTAMMLALPAFAADGAPGMFEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANAGRLVGD
Ga0310913_112934581	3300031945	Soil	MKRQALFAITVAAAMLALPAFADDGASGILGYRWGKNVFNFEPMPSGPQPLRNLSRLANGKANNGRLVGDWP
Ga0310910_103161081	3300031946	Soil	MKRQALFAITVAAAMLALPAFADDGASGILGYRWGKNVFNFEPMPSGPQPLRNLSRLANGKAN
Ga0306926_123734212	3300031954	Soil	MKRQALVLSVFTAAMLASSAFSAHAASVPDGAKEMLNHRFGKNAFNFEGMPSGPQPLRNLSRRPDGTANAGQLVG
Ga0318510_103440901	3300032064	Soil	MKRRAVFFSALAGVMLTGPALAADGAAGMLELRWGKNAFNFEGMPSGPQPLRNLSRLPDGKANAGRLVGDYRNPILTP
Ga0306924_125030181	3300032076	Soil	MKRKALVFSAFAATMLTLPTFAADGGSGILGVRWGKNAFNFEGMPSGPQPLRNLSRLPNG
Ga0306924_126232301	3300032076	Soil	MKRQALFFSIFAAAMLTVPAFAADGASGITGVRWGKNAINYEPMPSGPHPLTNMKRRPDGTANAAQ
Ga0318518_106814121	3300032090	Soil	MKRRARFLGTFAGIMLALPAYAGEGAQGMLQVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANAGRLVGDYHNPILTPAAAAIVKQK
Ga0307470_119215321	3300032174	Hardwood Forest Soil	VMLALPALAADGGLGMMEVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANAGQLVGD
Ga0335069_106338892	3300032893	Soil	MRSLVFGVCAIAIATVPAWAADNGAGMMGVRWGKNAFNFEAMPTGPKPLRNLSRRADGTAEAGRLVGDWHNPILTPEAAA
Ga0310914_101844611	3300033289	Soil	MKRRARFLGTFAGIMLALPAYAGEGAQGMLQVRWGKNAFNFEGMPSGPQPLRNLSRLPNGKANAGRLVGDYHNPILTPAAAA
Ga0318519_107150911	3300033290	Soil	MKRRARFLGTFAGIMLALPAYAGEGAQGMLQFRWGKNAFNFEGMPSGPQPLRNLSRLPNGKA
Ga0316624_114541142	3300033486	Soil	MKRQAPFFSVFTVAVFAVPAFAADGAPGMMELRWGKNAFNFEGMPSGPQPLRNLSRRPDGTAEAGRLVGDYNNPILTPEAASV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083097

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences