Metagenome Family F083178

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083178
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	112 residues
Representative Sequence	MPHVRRRAFILLLAARRTPARSWRARRSLRDDRGVAAAMNRWRPTAALAAMVLFGSLLAWEAEARILVCWWEYPGRMCTIIKSAKSTLRPQWVGNGHRRAPPPCPRGFWAVCGECPC
Number of Associated Samples	84
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.30 %
% of genes near scaffold ends (potentially truncated)	49.56 %
% of genes from short scaffolds (< 2000 bps)	81.42 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.292 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.708 % of family members)
Environment Ontology (ENVO)	Unclassified (42.478 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.903 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.25% β-sheet: 0.00% Coil/Unstructured: 36.75%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF02515	CoA_transf_3	0.88
PF00293	NUDIX	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.29 %
Unclassified	root	N/A	40.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.29 %
Unclassified	root	N/A	40.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.29 %
Unclassified	root	N/A	40.71 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.64 %
Unclassified	root	N/A	40.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	54.87 %
Unclassified	root	N/A	40.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.71 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.71 %
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.71 %
unclassified Methylosinus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.71 %
Methylosinus sp. LW4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW4	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000837\|AP72_2010_repI_A100DRAFT_1003655	All Organisms → cellular organisms → Bacteria → Proteobacteria	2162	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1007930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1932	Open in IMG/M
3300002914\|JGI25617J43924_10241874	Not Available	608	Open in IMG/M
3300004633\|Ga0066395_10060647	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300005332\|Ga0066388_103233651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300005332\|Ga0066388_103800434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300005332\|Ga0066388_103894575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300005445\|Ga0070708_100927074	Not Available	817	Open in IMG/M
3300005518\|Ga0070699_100002777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15622	Open in IMG/M
3300005556\|Ga0066707_10271247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1109	Open in IMG/M
3300005576\|Ga0066708_10655872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	668	Open in IMG/M
3300005713\|Ga0066905_100696209	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005713\|Ga0066905_100785743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW4	824	Open in IMG/M
3300005764\|Ga0066903_100981054	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300005764\|Ga0066903_104433256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	749	Open in IMG/M
3300005764\|Ga0066903_106436956	Not Available	612	Open in IMG/M
3300005764\|Ga0066903_106734871	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300005764\|Ga0066903_106796467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300005764\|Ga0066903_107921600	Not Available	545	Open in IMG/M
3300005764\|Ga0066903_109005933	Not Available	505	Open in IMG/M
3300006172\|Ga0075018_10786624	Not Available	521	Open in IMG/M
3300010043\|Ga0126380_10043338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2378	Open in IMG/M
3300010043\|Ga0126380_10046953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2306	Open in IMG/M
3300010046\|Ga0126384_10484730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1063	Open in IMG/M
3300010046\|Ga0126384_10557549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	997	Open in IMG/M
3300010046\|Ga0126384_11716490	Not Available	594	Open in IMG/M
3300010047\|Ga0126382_11276081	Not Available	662	Open in IMG/M
3300010048\|Ga0126373_10183604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2015	Open in IMG/M
3300010358\|Ga0126370_11317634	Not Available	678	Open in IMG/M
3300010358\|Ga0126370_11714704	Not Available	605	Open in IMG/M
3300010359\|Ga0126376_11554947	Not Available	692	Open in IMG/M
3300010359\|Ga0126376_12145523	Not Available	603	Open in IMG/M
3300010360\|Ga0126372_13229127	Not Available	507	Open in IMG/M
3300010361\|Ga0126378_10966943	Not Available	956	Open in IMG/M
3300010361\|Ga0126378_11615974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300010362\|Ga0126377_10329254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1517	Open in IMG/M
3300010366\|Ga0126379_10728144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1087	Open in IMG/M
3300010376\|Ga0126381_100795360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1358	Open in IMG/M
3300010376\|Ga0126381_103308513	Not Available	636	Open in IMG/M
3300010398\|Ga0126383_10330221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1537	Open in IMG/M
3300010398\|Ga0126383_10676716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1109	Open in IMG/M
3300010398\|Ga0126383_12519264	Not Available	599	Open in IMG/M
3300010863\|Ga0124850_1037624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1542	Open in IMG/M
3300012205\|Ga0137362_10221958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1630	Open in IMG/M
3300012209\|Ga0137379_10256344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1661	Open in IMG/M
3300012210\|Ga0137378_11466876	Not Available	594	Open in IMG/M
3300012211\|Ga0137377_10802996	Not Available	873	Open in IMG/M
3300012351\|Ga0137386_10039462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3235	Open in IMG/M
3300012353\|Ga0137367_10128144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1860	Open in IMG/M
3300012357\|Ga0137384_10180888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1766	Open in IMG/M
3300012918\|Ga0137396_10890045	Not Available	653	Open in IMG/M
3300012927\|Ga0137416_11211343	Not Available	680	Open in IMG/M
3300012948\|Ga0126375_10136125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1525	Open in IMG/M
3300012948\|Ga0126375_11610099	Not Available	560	Open in IMG/M
3300012971\|Ga0126369_10291521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1628	Open in IMG/M
3300012971\|Ga0126369_10500605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1273	Open in IMG/M
3300012971\|Ga0126369_10688154	Not Available	1099	Open in IMG/M
3300015372\|Ga0132256_102549937	Not Available	612	Open in IMG/M
3300016387\|Ga0182040_10125038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1791	Open in IMG/M
3300016422\|Ga0182039_11030042	Not Available	739	Open in IMG/M
3300020581\|Ga0210399_10938922	Not Available	700	Open in IMG/M
3300021178\|Ga0210408_10107003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2200	Open in IMG/M
3300021361\|Ga0213872_10064625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1653	Open in IMG/M
3300021560\|Ga0126371_10265465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1835	Open in IMG/M
3300021560\|Ga0126371_11289939	Not Available	864	Open in IMG/M
3300025922\|Ga0207646_10324217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1392	Open in IMG/M
3300025939\|Ga0207665_10369455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1086	Open in IMG/M
3300031543\|Ga0318516_10019321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3455	Open in IMG/M
3300031544\|Ga0318534_10016975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3792	Open in IMG/M
3300031544\|Ga0318534_10040086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2595	Open in IMG/M
3300031545\|Ga0318541_10020358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3166	Open in IMG/M
3300031546\|Ga0318538_10053866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1974	Open in IMG/M
3300031549\|Ga0318571_10008481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2332	Open in IMG/M
3300031549\|Ga0318571_10016223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1875	Open in IMG/M
3300031561\|Ga0318528_10222927	Not Available	1010	Open in IMG/M
3300031668\|Ga0318542_10050039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1893	Open in IMG/M
3300031668\|Ga0318542_10208241	Not Available	988	Open in IMG/M
3300031682\|Ga0318560_10013413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3591	Open in IMG/M
3300031682\|Ga0318560_10059701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1899	Open in IMG/M
3300031719\|Ga0306917_10038311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3144	Open in IMG/M
3300031724\|Ga0318500_10576543	Not Available	569	Open in IMG/M
3300031736\|Ga0318501_10142140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1230	Open in IMG/M
3300031736\|Ga0318501_10393322	Not Available	748	Open in IMG/M
3300031764\|Ga0318535_10124050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1142	Open in IMG/M
3300031765\|Ga0318554_10099427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1634	Open in IMG/M
3300031768\|Ga0318509_10311101	Not Available	881	Open in IMG/M
3300031771\|Ga0318546_10867492	Not Available	635	Open in IMG/M
3300031777\|Ga0318543_10363682	Not Available	648	Open in IMG/M
3300031781\|Ga0318547_10015919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3592	Open in IMG/M
3300031781\|Ga0318547_11031751	Not Available	514	Open in IMG/M
3300031782\|Ga0318552_10598648	Not Available	563	Open in IMG/M
3300031792\|Ga0318529_10009799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3534	Open in IMG/M
3300031793\|Ga0318548_10016188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3056	Open in IMG/M
3300031794\|Ga0318503_10142057	Not Available	772	Open in IMG/M
3300031796\|Ga0318576_10014502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2996	Open in IMG/M
3300031821\|Ga0318567_10441014	Not Available	738	Open in IMG/M
3300031833\|Ga0310917_10995764	Not Available	562	Open in IMG/M
3300031835\|Ga0318517_10034683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2047	Open in IMG/M
3300031835\|Ga0318517_10514612	Not Available	539	Open in IMG/M
3300031845\|Ga0318511_10316798	Not Available	707	Open in IMG/M
3300031860\|Ga0318495_10052222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1811	Open in IMG/M
3300031897\|Ga0318520_10548515	Not Available	716	Open in IMG/M
3300031981\|Ga0318531_10410052	Not Available	613	Open in IMG/M
3300032035\|Ga0310911_10078042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1780	Open in IMG/M
3300032044\|Ga0318558_10461036	Not Available	634	Open in IMG/M
3300032052\|Ga0318506_10133603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1079	Open in IMG/M
3300032054\|Ga0318570_10112082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1199	Open in IMG/M
3300032060\|Ga0318505_10300408	Not Available	757	Open in IMG/M
3300032063\|Ga0318504_10009281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3336	Open in IMG/M
3300032065\|Ga0318513_10046373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1934	Open in IMG/M
3300032066\|Ga0318514_10018793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3112	Open in IMG/M
3300032261\|Ga0306920_101972739	Not Available	818	Open in IMG/M
3300033290\|Ga0318519_10468377	Not Available	756	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.23%
Host-Associated	Host-Associated	1.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.35%
Plants	Host-Associated → Plants	1.77%
Aquatic	Environmental → Aquatic	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.77%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.42%
Loam	Environmental → Terrestrial → Soil → Loam	15.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.39%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A100DRAFT_10036552	3300000837	Forest Soil	MPHVRRRALILLLAARRTPARSWRARRSLRDDRAVAAATNRWRPIAALAAIVLFGSLLAWGAEARILVCWWEYPGRMCTIVKSAKPILRPQWVGNGYRRAPPPCPRGFWAVCGECPC*
AP72_2010_repI_A001DRAFT_10079301	3300000893	Forest Soil	ARSWRARRSLRDDRAVAAATNRWRPIAALAAIVLFGSLLAWGAEARILVCWWEYPGRMCTIIKPAKSATRQWAGNGYRRAPPPCPRGFWAVCGECPC*
JGI25617J43924_102418742	3300002914	Grasslands Soil	ASASWPMVTGAANRRRGIMPDVRRREFILFPTESRPLGRARRARQSPRGYRRVAAVTNLWRLTAALTATILLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSTIRPQWAGNGYRRAPPPCPRGFWAVCGECPC*
Ga0066395_100606472	3300004633	Tropical Forest Soil	MPGLRRREFIMLRAARTPGRSRRARQYLRGDRGVAAAMNRWRPIAALAALVLFGSLLAWGAEARILVCWWEYPGRMCTIIKSAKATFRSEWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0066388_1032336512	3300005332	Tropical Forest Soil	MPHVRRRALILLLAARRTPARSWRARRSLRDDRAVAAATNRWRPIAALAAIVLFGSLLAWGAEARILVCWWEYPGRMCTIIKPAKSATRQWAGNGYRRAPPPCPRGFWAVCGECPC*
Ga0066388_1038004341	3300005332	Tropical Forest Soil	MPDVRRRELIPFPTERGRQAARGARGNPHAAIAERLQPRIWRLTAALAGIILFGSLLSSGAEARILVCWWEYPGRMCAIIKSAKSTIRPQWVGNGSQSAAPMPTGILGGLR*
Ga0066388_1038945751	3300005332	Tropical Forest Soil	MPYVKRRAFILLLAARQTPARSWRARRFLRDDRGVAAAMNRWRPTAALAAMVLFGSLLAWEAEARILICWWEYPGRMCTIVKSTKPTLRPQWVGNGYRRAPPPCPRGFWAVCGECPC*
Ga0070708_1009270743	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVTDAANRRRGIMPDVRRPEFILFPTESRPLGRARRARQSPRGYRRVAAVTNLWRLTAALTATILLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSIVRPQWAGNGYRRAPPRCP
Ga0070699_10000277721	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPDVRRRAFILLLAARRTPGRSGRARASLRDDRGVATAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKSAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0066707_102712471	3300005556	Soil	WREFILFPTESRPLGRARRARQSPHGYRRVAAVTNLWRLTAALTATVLLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSIVRPQWAGNGSQSAAPMPTGILGGLR*
Ga0066708_106558722	3300005576	Soil	LRPLGRARRAQQSPRGYRRIAAVTHLWRLTAALTATILLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSIVRPQWAGNGSQSAAPMPTGILGGLR*
Ga0066905_1006962091	3300005713	Tropical Forest Soil	MPHVRRRAFILLLAARRRPARSWRARRSLRDDRGVAAAVNRWRPTAALTAMVLFGSLLAWEAEARILVCWWEYPGRMCTIVKSAKPTLRPQWVGNGYRRAPPPCPRGFWAVCGECPC*
Ga0066905_1007857431	3300005713	Tropical Forest Soil	MLLAVRRTPGRSRRVRQSLHGDRGVAVAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATPRSEWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0066903_1009810542	3300005764	Tropical Forest Soil	MPDVRRPEFILSPTESRPLGRARKSARGYRGAVAATNLWRLTAALTATILLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSTIRPQWVGNGSQSAAAMPTGILGGLR*
Ga0066903_1044332561	3300005764	Tropical Forest Soil	MPSLRRREFIMLRAARPTPGRSRRARQSLRDDRGVAAAMNRWRPIAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIIKSAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0066903_1064369562	3300005764	Tropical Forest Soil	MPGLRRREFIMLLAARRTPGRSRRARQSLHGDRGAAAAMNRWRTIAALAAIVLFSSLLAWEAEARILVCWWEYPGRMCTIIKPAKATLRSEWAGNGH
Ga0066903_1067348712	3300005764	Tropical Forest Soil	FILLLAARRTPARSWRARRSLRDDRAVAAATNRWRPTAALAAIVLFGSLLSGGAEARILVCWWEYPGRMCTIIKPAKSATRQWAGNGYRRAPPPCPRRFWAVCGECPC*
Ga0066903_1067964671	3300005764	Tropical Forest Soil	MPHVRRRAFILLLAARRTPARSWRARRSLRDDGGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIIKSAKSTLRPQWVGNGHRRAPPPCPRGFWAVCGECPC*
Ga0066903_1079216001	3300005764	Tropical Forest Soil	MPDVRRRELVRRREFILLPRGSRPLASPRGYRGALAATHLWRLTAALAATILLGSLLSSGAEARILLCWWEYPGRMCTIIKSTKSTIRPYWAGNGYRRAPPPCPRGFWAVCGECP
Ga0066903_1090059331	3300005764	Tropical Forest Soil	MPDVRRREFILLPTGSRPLGRAACAWQSPRGYRGAVAAAHLWRLTAALAATILLGSLLSSGAEARILLCWWEYPGRMCTIIKSTKSTIRPYWAGNGYRRAPPPC
Ga0075018_107866241	3300006172	Watersheds	AANRRRGIMPDVRRREFILFPTESRPLGRARGARQSPRGYRRVAAVTNLWRLTAALTATILLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSTIRPQWAGNGYRRAPPPCPRGFWAVCGECPC*
Ga0126380_100433382	3300010043	Tropical Forest Soil	MPGLRRREFIMLLAVRRTPGRSRRVRQSLHGDRGVAVAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPARATLRSAWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0126380_100469533	3300010043	Tropical Forest Soil	MPHVRRRAFILLLAARRTPARSWRARRSLRDDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIVKSAKPTLRPQWVGNGYRRAPPPCPRGFWAVCGECPC*
Ga0126384_104847301	3300010046	Tropical Forest Soil	MPDVRRRESILLPTGSRPLDRARQSPRSYRWMAAAMIRWRPSVAVAAIILFGSLLSSGAEARILVCWWEYPGRMCAIIKSAKSTMRPQWAGNGYRRAPPPCPRGFWAVCGECPC*
Ga0126384_105575491	3300010046	Tropical Forest Soil	MPGLRRREFIMLLAVRRTPGRSRRVRQSLHGDRGVAAAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0126384_117164901	3300010046	Tropical Forest Soil	MPHVRRRAFILLLAARRRPARSWRARRSLRDDRGVAAAVNRWRPTAALAAMVLFGSLLAWEAEARILVCWWEYPGRMCTIIKSAKSTLRPQWVGNGHRRAPPPCPRGFWAVCGECPC*
Ga0126382_112760812	3300010047	Tropical Forest Soil	MPHVRRRAFILLLAARRTPALPWRARRSLRDDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIIKSAKSTLRPQWVGNGHRRAPPPCPRGFWAVCGECPC*
Ga0126373_101836042	3300010048	Tropical Forest Soil	MPGLRRREFIMLRAARRTPGRSRRARQSLHDDRGLAAAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPARATLRSAWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0126370_113176341	3300010358	Tropical Forest Soil	MPDVRRREFILLPTGSRPPGRARRARQSPRGYRGAAAATHLGRLTAALAATILFGSLLSSAAEARILLCWWEYPGRMCTIIKSAKSTIRPYWAGNGYRRAPPPCPRGFWAVCGE
Ga0126370_117147041	3300010358	Tropical Forest Soil	MPDVRRRELVRRREFILLPRGSRPLGRATRARQSPRGYRGAVAATHLWRLTAALAATILLGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTIRPYWAGNGYRRAPPPCPRGFWAVC
Ga0126376_115549471	3300010359	Tropical Forest Soil	MPHVRRRAFILLLAARRTPARSWRARRSLRDDGGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIIKSAKSTLRPQWVGNGHRRAPPPCPRGFWAVCG
Ga0126376_121455231	3300010359	Tropical Forest Soil	MPDVRRRELVRRRAFILLPRGSRPLGRAARARQSPRGYRGAVAATHLWRLTAALAATILFVSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTIRPYWAGNGYRRAP
Ga0126372_132291271	3300010360	Tropical Forest Soil	MPHVRRRAFILLLAARRTPARSWRARRSLRDDGGVAAAMNRWRPTAALAAMVLFGSLLAWRAEARILVCWWEYPGRMCTIIKSAKATLRPQWVGNGHRRAPPPCPRGFWAVCGECPC*
Ga0126378_109669431	3300010361	Tropical Forest Soil	MPGLRRREFIMLLAARRTPGRSRRVRQSLHGDRGVAAAMNRWRPIAALAAIVLFSSLLAWEAEARILVCWWEYPGRMCTIIKPAKATLRSAWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0126378_116159742	3300010361	Tropical Forest Soil	MPHVRRRAFILLLAARRTPAHSWRARRSLRDDRGVAAAMNRWRPTAALAAIVLFGSLLAGGAEARILVCWWEYPGRMCTIIKPAKSTLRPQWVGNGHRRAPPPCPRGFWAVCGECPC*
Ga0126377_103292542	3300010362	Tropical Forest Soil	MPHVRRRAFILLLAARRTPARSWRARRSLRDDRGVAAAVNRWRPTAALAAMVLFGSLLAWEAEARILVCWWEYPGRMCTIIKSAKSTLRPQWVGNGHRRAPPPCPRGFWAVCGECPC*
Ga0126379_107281443	3300010366	Tropical Forest Soil	FILLLAARRTPARSWRARRSLRDDGGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIIKSAKSTLRPQWVGKGHRRAPPPCPRGFWAVCGECPC*
Ga0126381_1007953601	3300010376	Tropical Forest Soil	MPDVRRRGLVRRREFILVPRGPRPLGRAARAWQSPRGYRGAVAATHLWRLTAALAATILFGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTIRPYWAGNGYRRAPPPCPRG
Ga0126381_1033085131	3300010376	Tropical Forest Soil	MPHVRRRALILLLAARRTPARSWRARRSLRDDRAVAAATNRWRPIAALAAIVLFGSLLAWGAEARILVCWWEYPGRMCTIIKSAKVTLRPQWVGNGYRRAPPPCPRGFWAVCGECPC*
Ga0126383_103302211	3300010398	Tropical Forest Soil	MPNVRRRELVRRREFILLPRGSQPLGRAAGARQSPRGYRGALVATHLWRLTAALAATILLGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTMRPHWAGNGYRRAPPPCPRGFWAVCGECPC*
Ga0126383_106767161	3300010398	Tropical Forest Soil	GRRGIMPDVRRPEFFLSPTESRPLGRARKSARGYRGAVAATNLWRLTAALTATILLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSTIRPQWVGNGYRRAPPPCPRGFWAVCGECPC*
Ga0126383_125192641	3300010398	Tropical Forest Soil	MPGLRRREFIMLLAARRTPGRSRRARQFLPGDCGVAAAMNRWRPIAALAAIVLFSSLLAWEAEARILVCWWEYPGRMCTIIKPAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0124850_10376241	3300010863	Tropical Forest Soil	MPHVRRRAFILLLAARRTPARSWRARRSLRDDGGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIIKSAKSTLRPQWVGNGHRRAPPPCPRGF
Ga0137362_102219583	3300012205	Vadose Zone Soil	MSNVRRREFILLLAARRTTGRSRRARASLRDDRGVAATMIRWRPTAVLAAIVLFGSLLAWGAEARILVCWWEYPGRMCTIIKSAKATLRPEWARNSHGRAPPPCPRGFWAVCGECPC*
Ga0137379_102563441	3300012209	Vadose Zone Soil	MPHVRWREFILLLAAGRTPGRSWHARGSLRDDRGVAAAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKSAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0137378_114668761	3300012210	Vadose Zone Soil	MPDVRRREFILFPTESRPLGRARRARQSPHGYRRVAAVTNLWRLTAALTATVLLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSTIRPQWA
Ga0137377_108029962	3300012211	Vadose Zone Soil	MPDVRRRAFILLLAARRTPGRSGRARASLRDDRGVATAMNRWRPIAALAAIVLFSSLLAWGAEARVLVCWWEYPGRMCTIITSAKATLRSEWAGNGHRRAPPRCPRGFWAVCGECPC*
Ga0137386_100394624	3300012351	Vadose Zone Soil	MSNVRRREFILLLAARRTTGRSRRARASLRDDRVVAKNRWRPIAALAAIVLFSSLLAWGAEARVLVCWWEYPGRMCTIITSAKATLRSEWAGNGHRRAPPRCPRGFWAVCGECPC*
Ga0137367_101281442	3300012353	Vadose Zone Soil	MSNVRRREFILLLAARRTTGRSRRARASLRDDRGVATAMNRWRPIAALAAIVLFSSLLAWGAEARVLVCWWEYPGRMCTIIKSAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0137384_101808883	3300012357	Vadose Zone Soil	LLLAARRTTGRSRRARASLRDDRVVATAMNRWRPIAALAAIVLFSSLLAWGAEARVLVCWWEYPGRMCTIIKSAKSTLRSEWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0137396_108900451	3300012918	Vadose Zone Soil	MPDVRRRELILFPTDSRPLGHARQSPRGYRRVAAVTNLWRLTAALTATILLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSTIRPQWAGNGYRRAPPPCP
Ga0137416_112113431	3300012927	Vadose Zone Soil	MPDVRRRELILFPTDSRPLGHARQSPRGYRRVAAVTNLWRLTAALTATILLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSTIRPQWAGNGYRRAPPPCPRGFWAVCGECP
Ga0126375_101361251	3300012948	Tropical Forest Soil	MLLAARRPPARSWRARRSLRDDRGVAATMNRWRPTAALAAVVLFGSLLAWGAEARILVCWWEYPGRMCTIIKSAKSTLRPQWVGNGHRRAPPRCP
Ga0126375_116100991	3300012948	Tropical Forest Soil	MPHVRRRAFILLLAARRTPARSWRARRSLRDDRGVAAAMNRWRPTAALAAMVLFGSLLAWEAEARILVCWWEYPGRMCTIIKSAKSTLRPQWVGNGHRRAPPPCPRGFWAVCGECPC*
Ga0126369_102915211	3300012971	Tropical Forest Soil	MPDVRRRELVRRREFILLPRGSRPLGRATRARQSPRGYRGAVAATNLWRLTAALAATILLGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTIRP
Ga0126369_105006052	3300012971	Tropical Forest Soil	MPGLRRREFIMLQAARPTPGRSRRARQSLRGDRGVAAAMNRWRPIAALAVLVLFGSLLAREAEARILVCWWEYPGRMCTIIKSAKATFRSEWAGNGHRRAPPPCPRGFWAVCGECPC*
Ga0126369_106881542	3300012971	Tropical Forest Soil	MPDVRRRELVRRRAFILLPRGSRPLGRAARARQSPRGYRGAVAATHLWRLTAALAATILFGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTIRPYWAGN
Ga0132256_1025499371	3300015372	Arabidopsis Rhizosphere	MPDVRRREFILFPTESRPLGRARQSPRGYRRVAAVTNLWRLTAALTATILLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSTIRPQWAGKGY
Ga0182040_101250381	3300016387	Soil	MMTDAVGAGGESMPDVRRREFILLPTGSRPLRRAARARQSPRSYRGAVAATHLWRLTAALAATILFGSLLSSAAEARILVCWWEYPGRMCTIIKSAKSTIRPYWAGNGYR
Ga0182039_110300421	3300016422	Soil	MPDVRRREFILLPTGSRPPGRARQSPRGYRGAAAATHLGRLTAALAATILFGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTMRPHWAGYGYRRAPPPCPRGFWAVCGE
Ga0210399_109389221	3300020581	Soil	MLDVRRREFILSPTEPLGRARQSPRGYRRVAAVTNLWRLTAAVTATILLGSLLPSGTEARILVCWWEYPGRMCTIIKSAKSTIRPYWAGNGY
Ga0210408_101070033	3300021178	Soil	MVGFRIMPDVRRREFILFPRQSRPLGRARQSPRGYRRVAAVTHLWRLTAALAATILLGSLLSSGAEARVLVCWWEYPGRMCTIIKSTKSTIRPYWAGNGYRRAPPPCPRGFWAVCGECPC
Ga0213872_100646253	3300021361	Rhizosphere	MPDVRRREFILFPTQSRPLGRARRVRQPPRGYRRVAAVAHLWRLAGALTATILLGSLLASGAEARILVCWWEYPGRMCTIIKSVKSTMRPQWAGNGYRRAPPPCPRGFWAVCGECPC
Ga0126371_102654652	3300021560	Tropical Forest Soil	MPHVRRRALILLLAARRTPARSWRARRSLRDDRAVAAATNRWRPIAALAAVVLFGSLLSGGAEARILVCWWEYPGRMCTIIKPAKSATRQWAGNGYRRAPPPCPRGFWAVCGECPC
Ga0126371_112899392	3300021560	Tropical Forest Soil	MPDVRRREFIPFPTESRPLGRARQSPRGYRRVAAVTNLWRLTAALTATILLGSLLPSGAEARILVCWWEYPGRMCTIIKSAKSTIRPYWAGNGYRRAPPRCPRGFWAVCGECPC
Ga0207646_103242173	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPDVRRPEFILFPTESRPLGRARRARQSPRGYRRVAAVTNLWRLTAALTATILLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSIVRPQWAGNGYRRAPPRCPRGFWAVCGECPC
Ga0207665_103694552	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MVGFRIMPDVRRREFILFPRQSRPLGRARQSPRGYRRVAAVTHLWRLTAALAATILLGSLLSSGAEARVLVCWWEYPGRMCTIIKSTKSTIRPYWAGNGYRRAPPRCPRGFWAVCGECPC
Ga0318516_100193216	3300031543	Soil	MPNVRRRELVRRREFILLPRGSQPLGRAAGARQSPRGYRGALVATHLWRLTAALAATILLGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTMRPHWAGNGYRRAPPPCPRGFWAVCGECPC
Ga0318534_100169757	3300031544	Soil	MPHVRRREFVLLLAARRTSARSWRARRSLRDDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIVKSAKSTLRPQWVGNGHRRAPPLCPRGFWAVCGECPC
Ga0318534_100400862	3300031544	Soil	MPGLRRREFIMLLAARRTPGRSRRARQSLHSDRGAAAAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC
Ga0318541_100203581	3300031545	Soil	MPHVRRREFVLLLAARRTPARSWRARRSLRHDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIVKSAKSTLRPQWVGNGHRRAPPLCPRGFWAVCGECPC
Ga0318538_100538662	3300031546	Soil	MPGLRRREFIMLLAARRTPDRSRRVRQSLHGDRGVAAAMHRWRPTAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC
Ga0318571_100084815	3300031549	Soil	MLLAARRTPGRSRRARQSLHSDRGAAAAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC
Ga0318571_100162231	3300031549	Soil	MPGLRRREFIMLLAARRTPDRSRRVRQSLHGDRGVAAAMNRWRPTAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC
Ga0318528_102229271	3300031561	Soil	MPDVRRRELIPFPTESRPPGRARRARQSPRGYRGAVAATHLWRLTAALAGIILFGSLLSSGAEARILVCWWEYPGRMCAIIKSAKSTIRPQWVGNGYRRAPPPCPRGFWAVCGECPC
Ga0318542_100500394	3300031668	Soil	LVTDAANRRRGIMPDVRRRDFILFPTESRPLGRARRARQSPRGYRRVAAVTHLWRLTAALTATILLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSIVRPQWAGNGYRRAPPRCPRGFWAVCGECPC
Ga0318542_102082411	3300031668	Soil	MPNVRRRELVRRREFILLPRGSRPLARAARARQSPRGYRGALAATHLWRLTAALAATILFGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTIRPH
Ga0318560_100134132	3300031682	Soil	MPGLRRREFIMLLAARRTPGRSRRARQSLHSDRGAAVAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC
Ga0318560_100597012	3300031682	Soil	MPHVRRREFILLLAARRTSARSWRARRSLRDDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIVKSAKSTLRPQWVGNGHRRAPPLCPRGFWAVCGECPC
Ga0306917_100383111	3300031719	Soil	WTSARSWRARRSLRDDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIVKSAKSTLRPQWVGNGHRRAPPLCPRGFWAVCGECPC
Ga0318500_105765431	3300031724	Soil	GPPPAGSVVTDTIGPRQRAPMPGLRRREFIMLLAARRTPGRSRRARQFLPGDRGVAAAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC
Ga0318501_101421403	3300031736	Soil	TPRSWRARRSLRHDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWSEYPGRMCTIVKSAKSTLRPQWVGNGHRRAPPLCPRGFWAVCGECPC
Ga0318501_103933221	3300031736	Soil	MPDVRRREFILLPTGSRPPGRARRTRQSPRGYRGAAAATHLGRLTAALAATILFGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTMRPHWAGYGYRRAPP
Ga0318535_101240501	3300031764	Soil	REFVLLLAARRTSARSWRARRSLRDDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIVKSAKSTLRPQWVGNGHRRAPPLCPRGFWAVCGECPC
Ga0318554_100994272	3300031765	Soil	MPNVRRRELVRRREFILLPRGSQPLGRAAGARQSPRGYRGALVATHLWRLTAALAATILLGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTIRPHWAGNGYRRAPPPCPRGFWAVCGECPC
Ga0318509_103111012	3300031768	Soil	MPDVRRREFILLPTGSRPLRRAARARQSPRSYRGAVAATHLWRLTAALAATILFGSLLSSAAEARILVCWWEYPGRMCTIIKSAKSTIRPYWAGNGYRRAPP
Ga0318546_108674921	3300031771	Soil	MPDVRRRELIPFPTESRPPGRARRARQSPRGYRGAVAATHLWRLTAALAGIILFGSLLSSGAEARILVCWWEYPGRMCAIIKSAKSTIRPQWVGNGYRRAPPPCPRGFWVVC
Ga0318543_103636822	3300031777	Soil	MPDVRRRDFILFPTESRPLGRARRARQSPRGYRRVAAVTHLWRLTAALTATILLGSLLSSGAEARILVCWWEYPGRMCTIIKSAKSIVRPQWAGNGYRRAPPRCPRGFWAVCGECPC
Ga0318547_100159192	3300031781	Soil	MPHVRRREFVLLLAARRTPARSWRARRSLRHDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWSEYPGRMCTIVKSAKSTLRPQWVGNGHRRAPPLCPRGFWAVCGECPC
Ga0318547_110317511	3300031781	Soil	IMLLAVRRTPGRSRRVRQSLHGDRGVAAAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATPRSEWAGNGHRRAPPPCPRGFWAVCGECPC
Ga0318552_105986481	3300031782	Soil	MPNVRRRELVRRREFILLPRGSQPLGRAAGARQSPRGYRGALVATHLWRLTAALAATILLGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTMRPHWAGN
Ga0318529_100097992	3300031792	Soil	MPGLRRREFIMLLAARRTPGRSRRARQSLHSDRGAAAAMNRWRPIAALAAIDLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC
Ga0318548_100161885	3300031793	Soil	MPDVRRREFILLPTESRPLGRARRARQSPRGYRRVAAVTNLWRLTAALTATILLGSLLPSGAEARILVCWWEYPGRMCTIIKSAKSTIRPQWAGNGYRRAPPPCPRGFWAVCGECPC
Ga0318503_101420571	3300031794	Soil	MPDVRRREFILLPTESRPLGRARRARQSPRGYRRVAAVTNLWRLTAALTATILLGSLLPSGAEARILVCWWEYPGRMCTIIKSAKSTIRPQWAGNG
Ga0318576_100145021	3300031796	Soil	MPHVRRREFVLLLAARRTPARSWRARRSLRDDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIVKSAKSTLRPQWVGNGHRRAPPLCPRGFWAVCGECPC
Ga0318567_104410141	3300031821	Soil	MPDVRRREFILLPTGSRPPGRARRTRQSPRGYRGAAAATHLGRLTAALAATILFGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTMRPHWAGYGYRRAP
Ga0310917_109957641	3300031833	Soil	MPDVRRRELIPFPTESRPPGRARRARQSPRGYRGAVAATHLWRLTAALAGIILFGSLLSSGAEARILVCWWEYPGRMCAIIKSAKSTIRPQWVGNGY
Ga0318517_100346832	3300031835	Soil	MPGLRRREFIMLLAARRTPDRSRRVRQSLHGDRGVAAAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATLRSEWAGNGHRRAPPPCPRGFWAVCGECPC
Ga0318517_105146121	3300031835	Soil	MPDVRRRELIPFPTESRPPGRARRARQSPRGYRGAVAATHLWRLTAALAGIILFGSLLSSGAEARILVCWWEYPGRMCAIIKSAKSTIRPQWVGNGYRRAPPPCPRGFWAVCGE
Ga0318511_103167981	3300031845	Soil	MPDVRRRELIPFPTESRPPGRARRARQSPRGYRGAVAATHLWRLTAALAGIILFGSLLSSGAEARILVCWWEYPGRMCAIIKSAKSTIRPQWVGNGYRRAPPPCPRGPDGGHRRRGIRRLAGTLTAD
Ga0318495_100522223	3300031860	Soil	MPHVRRREFVLLLAARRTAARSWRARRSLRHDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIVKSAKSTLRPQWVGNGHRRAPPLCPRGFWAVCGECPC
Ga0318520_105485152	3300031897	Soil	MPDVRRREPIPFPTESRPPGRARRARQSPRGYRGAVAATHLWRLTAALAGIILFGSLLSSGAEARILVCWWEYPGRMCAIIKSAKSTIRPQ
Ga0318531_104100521	3300031981	Soil	MPDVRRRELIPFPTESRPPGRARRARQSPRGYRGAVAATHLWRLTAALAGIILFGSLLSSGAEARILVCWWEYPGRMCAIIKSAKSTIRPQWVGNGYR
Ga0310911_100780423	3300032035	Soil	MPNVRRLELVSRREFILLPRGSRPLARAARARQSPRGYRGALAATHLWRLTAALAATILLGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTIRPHWAGNGYRRAPPPCPRGFWAVCGECPC
Ga0318558_104610361	3300032044	Soil	MPHVRRREFVLLLAARRTSARSWRARRSLRDDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWSEYPGRMCTIVKSAKSTLRPQWVGNGHRRAPPLCPRGFWAVC
Ga0318506_101336031	3300032052	Soil	MPNVRRRELVRRREFILLPRGSQPLGRAAGARQSPRGYRGALVATHLWRLTAALAATILLGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTMRPHWAG
Ga0318570_101120822	3300032054	Soil	MPDVRRRELIPFPTESRPPGRARRARQSPRGYRGAVAATHLWRLTAALAGIILFGSLLSSGAEARILVCWWEYPGRMCAIIKSAKSTIRPQWVGNGYRRAPPPCPRGF
Ga0318505_103004081	3300032060	Soil	MPNVRRLELVSRREFILLPRGSRPLARAARARQSPRGYRGALAATHLWRLTAALAATILLGSLLSSGAEARILLCWWEYPGRMCTIIKSAKSTIRPHWAGNSYRRAPPPCPRGFW
Ga0318504_100092812	3300032063	Soil	MPGLRRREFIMLLAARRTPGRSRRARQSLHSDRGAAAAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATPRSEWAGNGHRRAPPPCPRGFWAVCGECPC
Ga0318513_100463732	3300032065	Soil	MPGLRRREFIMLLAARRTPGRSRRARQSLHSDRGAAAAMNRWRPIAALAAIVLFSSLLAWGAEARILVCWWEYPGRMCTIIKPAKATLRSEWTGNGHRRAPPPCPRGFWAVCGECPC
Ga0318514_100187931	3300032066	Soil	MPHVRRREFVLLLAARRTPARSWRAQRSLRHDRGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIVKSAKSTLRPQWVGNGHRRAPPLCPRGFWAVCGECPC
Ga0306920_1019727391	3300032261	Soil	MPHVRRRAFILLLAARRTPARSWRARRSLRDDGGVAAAMNRWRPTAALAAMVLFGSLLAWGAEARILVCWWEYPGRMCTIIKSAKSTLRPQWVGNGHRRAPPPCPRG
Ga0318519_104683771	3300033290	Soil	MPDVRRRELIPFPTESRPPGRARRARQSPRGYRGAVAATHLWRLTAALAGIILFGSLLSSGAEARILVCWWEYPGRMCAIIKSAKSTIRPQWVGNGYRRAPPPCPRGFWAVCG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083178

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences