Metagenome / Metatranscriptome Family F083217

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083217
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	64 residues
Representative Sequence	MVVLNRRAFMAVTAAGVVAPAVIAAQEVVAKGMDWMTMSLEARNLAFNNVAHVGPEFARKKTE
Number of Associated Samples	76
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.35 %
% of genes near scaffold ends (potentially truncated)	96.46 %
% of genes from short scaffolds (< 2000 bps)	92.92 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.212 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (30.088 % of family members)
Environment Ontology (ENVO)	Unclassified (56.637 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.221 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.34% β-sheet: 0.00% Coil/Unstructured: 40.66%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04392	ABC_sub_bind	4.42
PF01547	SBP_bac_1	2.65
PF13180	PDZ_2	1.77
PF07969	Amidohydro_3	1.77
PF13193	AMP-binding_C	1.77
PF13561	adh_short_C2	0.88
PF13458	Peripla_BP_6	0.88
PF13474	SnoaL_3	0.88
PF02775	TPP_enzyme_C	0.88
PF14196	ATC_hydrolase	0.88
PF07681	DoxX	0.88
PF03060	NMO	0.88
PF12796	Ank_2	0.88
PF03544	TonB_C	0.88
PF00135	COesterase	0.88
PF01494	FAD_binding_3	0.88
PF02371	Transposase_20	0.88
PF00271	Helicase_C	0.88
PF00378	ECH_1	0.88
PF06348	DUF1059	0.88
PF12773	DZR	0.88
PF13358	DDE_3	0.88
PF08241	Methyltransf_11	0.88
PF01548	DEDD_Tnp_IS110	0.88
PF00326	Peptidase_S9	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.42
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.77
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.77
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.88
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.88
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.88
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.88
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.88
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.88
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.88
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.88
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
All Organisms	root	All Organisms	47.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
cellular organisms	root	All Organisms → cellular organisms	47.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.47 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.54 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.16 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.54 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.08 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.54 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.88 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.77 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.88 %
Alphaproteobacteria bacterium MarineAlpha11_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha11_Bin1	0.88 %
unclassified Chromatiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales	0.88 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.88 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.88 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.88 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.77 %
Candidatus Kerfeldbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kerfeldbacteria	0.88 %
Chromatiales bacterium USCg_Taylor	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium USCg_Taylor	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.88 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.88 %
Alphaproteobacteria bacterium MarineAlpha11_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha11_Bin1	0.88 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.77 %
Candidatus Kerfeldbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kerfeldbacteria → Candidatus Kerfeldbacteria bacterium	0.88 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.88 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.88 %
Methylocystis parvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	0.88 %
Chromatiales bacterium USCg_Taylor	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium USCg_Taylor	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.88 %
Alphaproteobacteria bacterium MarineAlpha11_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha11_Bin1	0.88 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.77 %
Bradyrhizobium sp. ORS 375	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ORS 375	0.88 %
Candidatus Kerfeldbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kerfeldbacteria → Candidatus Kerfeldbacteria bacterium	0.88 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.88 %
Methylocystis parvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	0.88 %
Chromatiales bacterium USCg_Taylor	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium USCg_Taylor	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.88 %
Alphaproteobacteria bacterium MarineAlpha11_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha11_Bin1	0.88 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10121347	All Organisms → cellular organisms → Bacteria	2621	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1067377	Not Available	545	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10121103	Not Available	638	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1040772	Not Available	654	Open in IMG/M
3300000890\|JGI11643J12802_10541119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300002245\|JGIcombinedJ26739_100857445	Not Available	790	Open in IMG/M
3300003505\|JGIcombinedJ51221_10058473	Not Available	1481	Open in IMG/M
3300004267\|Ga0066396_10000569	All Organisms → cellular organisms → Bacteria	2807	Open in IMG/M
3300004267\|Ga0066396_10056397	Not Available	644	Open in IMG/M
3300004798\|Ga0058859_11445169	Not Available	538	Open in IMG/M
3300005328\|Ga0070676_11618071	Not Available	501	Open in IMG/M
3300005332\|Ga0066388_103200836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	836	Open in IMG/M
3300005332\|Ga0066388_103731290	Not Available	777	Open in IMG/M
3300005332\|Ga0066388_104405091	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300005332\|Ga0066388_104418051	Not Available	716	Open in IMG/M
3300005332\|Ga0066388_107519606	Not Available	547	Open in IMG/M
3300005434\|Ga0070709_11464074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	554	Open in IMG/M
3300005457\|Ga0070662_101735574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ORS 375	539	Open in IMG/M
3300005488\|Ga0074213_158403	Not Available	895	Open in IMG/M
3300005610\|Ga0070763_10483673	Not Available	706	Open in IMG/M
3300005713\|Ga0066905_100467128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300005713\|Ga0066905_100817829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	809	Open in IMG/M
3300005713\|Ga0066905_101615425	Not Available	593	Open in IMG/M
3300005764\|Ga0066903_100915513	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300005764\|Ga0066903_101033211	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300005764\|Ga0066903_101151604	Not Available	1435	Open in IMG/M
3300005764\|Ga0066903_101596928	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300005764\|Ga0066903_103541482	Not Available	841	Open in IMG/M
3300005764\|Ga0066903_104070321	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300005764\|Ga0066903_105536581	Not Available	665	Open in IMG/M
3300005764\|Ga0066903_105768507	Not Available	650	Open in IMG/M
3300005841\|Ga0068863_100258136	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300005937\|Ga0081455_10370574	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300006050\|Ga0075028_100943009	Not Available	534	Open in IMG/M
3300006169\|Ga0082029_1296727	Not Available	619	Open in IMG/M
3300006174\|Ga0075014_100128436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	1215	Open in IMG/M
3300006176\|Ga0070765_101578559	Not Available	617	Open in IMG/M
3300006914\|Ga0075436_100669550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	767	Open in IMG/M
3300009100\|Ga0075418_12927144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	521	Open in IMG/M
3300009111\|Ga0115026_11083992	Not Available	645	Open in IMG/M
3300009167\|Ga0113563_10780651	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300009174\|Ga0105241_12678716	Not Available	502	Open in IMG/M
3300009176\|Ga0105242_12347223	Not Available	580	Open in IMG/M
3300009521\|Ga0116222_1118849	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
3300010043\|Ga0126380_10274201	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300010043\|Ga0126380_10968586	Not Available	713	Open in IMG/M
3300010046\|Ga0126384_11470611	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300010046\|Ga0126384_12169574	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300010047\|Ga0126382_10626118	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300010048\|Ga0126373_10007181	All Organisms → cellular organisms → Bacteria → Proteobacteria	8775	Open in IMG/M
3300010358\|Ga0126370_10796035	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300010358\|Ga0126370_11675862	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300010358\|Ga0126370_11947566	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300010359\|Ga0126376_10204981	Not Available	1638	Open in IMG/M
3300010360\|Ga0126372_11020005	Not Available	840	Open in IMG/M
3300010361\|Ga0126378_11331313	Not Available	812	Open in IMG/M
3300010361\|Ga0126378_12989404	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300010362\|Ga0126377_13480880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300010366\|Ga0126379_10550818	Not Available	1233	Open in IMG/M
3300010366\|Ga0126379_12188138	Not Available	654	Open in IMG/M
3300010376\|Ga0126381_100845777	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300010376\|Ga0126381_101590459	Not Available	944	Open in IMG/M
3300010376\|Ga0126381_102427300	Not Available	752	Open in IMG/M
3300010376\|Ga0126381_103561827	Not Available	611	Open in IMG/M
3300010376\|Ga0126381_104393035	Not Available	545	Open in IMG/M
3300010391\|Ga0136847_13650500	Not Available	508	Open in IMG/M
3300010396\|Ga0134126_11557198	Not Available	728	Open in IMG/M
3300010398\|Ga0126383_12458088	Not Available	606	Open in IMG/M
3300010398\|Ga0126383_13147480	Not Available	539	Open in IMG/M
3300010863\|Ga0124850_1012473	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2707	Open in IMG/M
3300010863\|Ga0124850_1084931	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300012096\|Ga0137389_10152847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1890	Open in IMG/M
3300012189\|Ga0137388_11416427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300012359\|Ga0137385_11244356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300012948\|Ga0126375_10151277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1463	Open in IMG/M
3300012948\|Ga0126375_11297000	Not Available	612	Open in IMG/M
3300012948\|Ga0126375_11892876	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	524	Open in IMG/M
3300012955\|Ga0164298_10417797	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300012960\|Ga0164301_10064034	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300012961\|Ga0164302_11268736	Not Available	593	Open in IMG/M
3300012971\|Ga0126369_10055242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	3414	Open in IMG/M
3300012971\|Ga0126369_11268235	All Organisms → cellular organisms → Bacteria → Proteobacteria	827	Open in IMG/M
3300012971\|Ga0126369_13398379	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	521	Open in IMG/M
3300016357\|Ga0182032_11570121	Not Available	572	Open in IMG/M
3300020580\|Ga0210403_11124868	Not Available	609	Open in IMG/M
3300020583\|Ga0210401_10282787	Not Available	1519	Open in IMG/M
3300021078\|Ga0210381_10268873	Not Available	610	Open in IMG/M
3300021470\|Ga0194051_1095780	Not Available	1038	Open in IMG/M
3300021560\|Ga0126371_10167837	All Organisms → cellular organisms → Bacteria	2270	Open in IMG/M
3300021560\|Ga0126371_11469778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium USCg_Taylor	811	Open in IMG/M
3300021560\|Ga0126371_12932990	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	578	Open in IMG/M
3300021560\|Ga0126371_13779743	Not Available	510	Open in IMG/M
3300021560\|Ga0126371_13810516	Not Available	508	Open in IMG/M
3300025899\|Ga0207642_10456473	Not Available	775	Open in IMG/M
3300025928\|Ga0207700_11703979	Not Available	556	Open in IMG/M
3300027527\|Ga0209684_1000151	All Organisms → cellular organisms → Bacteria	12724	Open in IMG/M
3300027654\|Ga0209799_1012742	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300027874\|Ga0209465_10422003	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kerfeldbacteria → Candidatus Kerfeldbacteria bacterium	667	Open in IMG/M
3300027874\|Ga0209465_10573261	Not Available	560	Open in IMG/M
3300028719\|Ga0307301_10262033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	565	Open in IMG/M
3300028819\|Ga0307296_10386878	Not Available	764	Open in IMG/M
3300028889\|Ga0247827_10435418	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300029987\|Ga0311334_11159113	Not Available	647	Open in IMG/M
3300031573\|Ga0310915_11274610	Not Available	507	Open in IMG/M
3300031910\|Ga0306923_12471355	Not Available	513	Open in IMG/M
3300032012\|Ga0310902_10435263	Not Available	842	Open in IMG/M
3300032076\|Ga0306924_10221647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha11_Bin1	2172	Open in IMG/M
3300032076\|Ga0306924_12482846	Not Available	520	Open in IMG/M
3300032256\|Ga0315271_11700183	Not Available	542	Open in IMG/M
3300032261\|Ga0306920_101517059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	956	Open in IMG/M
3300032261\|Ga0306920_102920380	Not Available	647	Open in IMG/M
3300032342\|Ga0315286_10328842	Not Available	1615	Open in IMG/M
3300033487\|Ga0316630_10305811	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.15%
Host-Associated	Host-Associated	8.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.30%
Aquatic	Environmental → Aquatic	8.85%
Plants	Host-Associated → Plants	7.96%
Human	Host-Associated → Human	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.42%
Freshwater	Environmental → Aquatic → Freshwater	7.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.65%
Sediment	Environmental → Aquatic → Sediment	1.77%
Peat	Environmental → Terrestrial → Peat	0.89%
Digestive System	Host-Associated → Human → Digestive System	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.10%
Loam	Environmental → Terrestrial → Soil → Loam	27.43%
Lake	Environmental → Aquatic → Freshwater → Lake	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	24.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.54%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.89%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	30.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	21.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.77%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.89%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.89%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.89%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.89%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005488	Sediment ecosystem from Lake Washington, Seattle, Washington, USA - Methane enrichment	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021470	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L239-20m	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_101213475	3300000550	Soil	MPMISRRTFVTATAASVVAPNVARGKECPAAVMDWMTMSLEARNLAYNNGEHVGLDYARTKTESWVAASKALREQRSKHL
AF_2010_repII_A01DRAFT_10673771	3300000580	Forest Soil	MVVLNRRAFMAMTAAGVVAPAVIGAKGVVAKGMDWMTMSLEERNLAFNNVAHVGPEFAREKTEGWAAASKALR
AF_2010_repII_A1DRAFT_101211031	3300000597	Forest Soil	MVVLNRRAFMAMTAAGVVAPAVIGAKEVVAKGMDWMTMSLEERNLAFNNVAHVGPEFARKKTEGWAAASKALRAQRP
AP72_2010_repI_A100DRAFT_10407721	3300000837	Forest Soil	MVVLNRRAFMAMTAAGVVAPAVIGAKGVVAKGMDWMTMSLEERNLAFNNVAHVGPEFAXKKTEGWAAA
JGI11643J12802_105411191	3300000890	Soil	MAATISRRAFVTATAASVVTPNVARAKECPAAGMDWMNMSLAARNLAYNNGEHVGLDYARTKT
JGIcombinedJ26739_1008574452	3300002245	Forest Soil	MALTRRAFAAATAAGVVXPTVARAKECPAAAMDWMTMSLEARNLAYFNVAHVGADFARQKTEG*
JGIcombinedJ51221_100584731	3300003505	Forest Soil	MALTRRAFAAATAAGVVAPTVAHAKECPPAGMDWMTMSLEARNLAYFNVAHVGADFARQKTESWAAASKDLRAQRPKHL
Ga0066396_100005691	3300004267	Tropical Forest Soil	MVVLNRRAFMAMTAAGVVAPAVIGAKGVVAKGMDWMTMSLEARNLAFNNVAHVGPEFA
Ga0066396_100563972	3300004267	Tropical Forest Soil	MGVLNRRAFMAVTAAGIVAPTVSAAKEVVAKGMDWMTMSLEERNLAFNNVAHVG
Ga0058859_114451691	3300004798	Host-Associated	MVVLNRRAFMAVTAAGVVAPAVIAAQEEVVAKGMDWMTMSLEARNLAFNNVAHVGPEFARKKTEGWAAASNALRAQRPKHQLVRRP*
Ga0070676_116180712	3300005328	Miscanthus Rhizosphere	MAATISRRAFVTATAASVVTPNVARAKECPAAGMDWMNMSLEARNLAYNNGEHVGLDFARTKTESWIAASKALRE
Ga0066388_1032008361	3300005332	Tropical Forest Soil	MMATISRRAFVTATAASVAAPSVAGAKECPAAGMDWMTMSLEARNLAYNNGEHVG
Ga0066388_1037312901	3300005332	Tropical Forest Soil	MVVLNRRAFIAVTAAGVVAPTVIAAKEQESSRMDWMTMSLEARNLAFNNVAHVGPEFA
Ga0066388_1044050911	3300005332	Tropical Forest Soil	MVVLNRRAFIAVTAAGVVAPTVIAAKEEESSRMDWMTMSLEARNLAFNNVAHVGPEFARQ
Ga0066388_1044180511	3300005332	Tropical Forest Soil	MGVLNHRAFMAVTAAGIVAPMVSAAKKVVARGMNWMTMSLEERNLAFNNVAHVGPEFAQKKTEEWAAASKALR
Ga0066388_1075196061	3300005332	Tropical Forest Soil	MVVLNRRAFMAVTTTGVLAPPVMAAKEDGARGMDWMTMSLEARNLAFNNVAHVGSAVALKKTEEWAAASKA
Ga0070709_114640741	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAATISRRAFVTATAASVVTPNVARAKECPAAGMDWMNMSLEARNLAYNNGEHVGLDFAR
Ga0070662_1017355741	3300005457	Corn Rhizosphere	MALTRRAFAAATAAGVAVPTIARAKECPAAGMDWMTMSLEARNLAYFNMAHVGADFARQKTEN
Ga0074213_1584031	3300005488	Sediment	MAGLDRRAFLAMTAMSLTAPPIIFGREGVAKDMDWQTMSLEARNLAFNNVAHVDLIRA
Ga0070763_104836733	3300005610	Soil	MALTRRAFAAATAAGVVAPTIARAKECPAAGMDWMTMSLEARNLAYFNAAHVGPDFARRK
Ga0066905_1004671281	3300005713	Tropical Forest Soil	MVVLNRGTFMAVTAAGVVAPTVVPANEVVAKEKDSMRDWMTMSLEARNLAFNNVAHVGP
Ga0066905_1008178291	3300005713	Tropical Forest Soil	MVVLNRRAFMAVTAAGVVASTVIAAKEKESSRMDWMTMSLEARNLAFNNVAHVGPEFARQ
Ga0066905_1016154251	3300005713	Tropical Forest Soil	MAMISRRAFVTATAASVATPNVARGKECPAAGMDWMTMSLEARNLAYNNGEHVGLDYARA
Ga0066903_1009155134	3300005764	Tropical Forest Soil	MVVLNRRAFMAVTAANLVAPAVVGANEVVTKAKNCMRDWMTMSLEARNLAFNNVAHVGPDFARTKTEGWAAAS
Ga0066903_1010332111	3300005764	Tropical Forest Soil	MVVLNRRAFIAVTAAGVVAPTVIAAKEEESSRMDWMTMSLEARNLAFNNVAHVGPEFAR
Ga0066903_1011516042	3300005764	Tropical Forest Soil	MVALSRRAFMAVTAAGVVAPTVVAANEVVAKGKDCMKDWTTMSLEARNLAFNNV
Ga0066903_1015969281	3300005764	Tropical Forest Soil	MAVLNRRAFMAVTAAGVVAPTVTAAKEGVAKGMDWMTMSLEGRNLAFNNVAHVGPEFARKKTEEWAAASKA
Ga0066903_1035414821	3300005764	Tropical Forest Soil	MGVLNRRAFMAVTAAGIVAPTVSAAKEVVAKGMDWMTMSLEERNLAFNNVAHVGPEFARKKTEGWAAASKAL
Ga0066903_1040703212	3300005764	Tropical Forest Soil	MVVLDRRAFMAVTAAGVVAPTVVGANEVVTKAKDCMSDWMTMSLEARNLAFNN
Ga0066903_1055365811	3300005764	Tropical Forest Soil	MVVFNRRAFMAVTAAGVVAPAVIGAKAVVAKGMDWMTISLEERNLAFNNVAHVGPEFARKKTEGWAAASKALRAQRPK
Ga0066903_1057685071	3300005764	Tropical Forest Soil	MVVLNRRAFIAVTAAGVVAPAVIGAKEVVAKGMDWMTMSLEARNLAFNNVAHVGPEFARKKTEGWAAASK
Ga0068863_1002581363	3300005841	Switchgrass Rhizosphere	MVVLNRRAFMAVTAAGVVAPAVIAAQEVVAKGMDWMTMSLEARNLAFNNVAHVGPEFARKKTE
Ga0081455_103705742	3300005937	Tabebuia Heterophylla Rhizosphere	MPMISRRTFVTATAASVVTPNVARAKECPAAAMDWMTMSLEARNLAYNNGEHVGLDY
Ga0075028_1009430092	3300006050	Watersheds	MALTRRAFAAATAAGVVASPTIARAKECPAAGMDWMTMSLEARNLAYFNVAHVGADFARQKTESW
Ga0082029_12967271	3300006169	Termite Nest	MTGDLHAIVAAACADLVVPTHAASKEVPKAGMDWQTMSLEARNLAYNNVAHVGPDVARTKTE
Ga0075014_1001284361	3300006174	Watersheds	MALTRRAFAAATAAGVVASPTIARAKECPAAGMDWMTMSLEARNLAYFNVVHVGADFARQKTESWTAASK
Ga0070765_1015785591	3300006176	Soil	MALTRRAFAAATAAGVVVPTIARAKECPAAGMDWMTMSLEARNLAYFNVAHVGADFARQK
Ga0075436_1006695501	3300006914	Populus Rhizosphere	MAATISRRAFVTATAASVVTPNVGRAKECPAAGMDWMNMSLEARNLAYNNGEHV
Ga0075418_129271442	3300009100	Populus Rhizosphere	MATISRRAFVTATAASVAAPNVARAKECPAAGMDWMTMSLEARNLAYNNGQHVGLDYARM
Ga0115026_110839921	3300009111	Wetland	MALTAAGFVVPSAIAAREAAANGMDWMTMSLEARNLAFNNVAHVGADFARKKTEA
Ga0113563_107806513	3300009167	Freshwater Wetlands	MALTAAGFVVPSAIAAREAAANGMDWMTMSLEARNLAFNNVAHV
Ga0105241_126787161	3300009174	Corn Rhizosphere	MAMISRRAFVTATAASVATPNVARAKECPAAGMDWMTMSLEARNLAYNNGVHVGLDYARTKTESWIATSKTLREQRSKHL
Ga0105242_123472231	3300009176	Miscanthus Rhizosphere	MATINRRSFVAATAASVTAPAIARAKECPAAGMDWMNMSLQARNSAYNNGEHVGLDFARIKTESWIAGSKALREQRSKHLDLPY
Ga0116222_11188491	3300009521	Peatlands Soil	MALTRRAFVAATAAGVVVPTVARAKECPAAGMDWMTMSLEARNLAYFNVAHVGADFARQKTESWT
Ga0126380_102742011	3300010043	Tropical Forest Soil	MGVLNRRAFMAVTAAGIVAPAVIGAKAVVAKGMDWMTMSLEERNLAFNNVAHVGPEFA
Ga0126380_109685861	3300010043	Tropical Forest Soil	MVVLNRRAFMAVTAAGVVAPAVIGAKAVVAKGMDWMTMSLEERNLAFNNVAHVGPEFA
Ga0126384_114706112	3300010046	Tropical Forest Soil	MVVLNRRAFMAVTAAGIVAPAVIGAKEVVAKGMDWMTMSLEERNLAFNNVAHVG
Ga0126384_121695742	3300010046	Tropical Forest Soil	MAVTAAGIVAPAVSAAKEVVARGMDWMTMSLEERNLAFNTVSYEGPVAAEKKRKVGSGA*
Ga0126382_106261182	3300010047	Tropical Forest Soil	MVVLNRRAFMAMTAAGVVAPAVIGAKGVVAKGMDWMTMSLEERNLAFNNVAHVGPEFAR
Ga0126373_100071818	3300010048	Tropical Forest Soil	MVVLNRRAFMAMTAAGVVAPAVIGAKGVVAKGMDWMTMSLEERNLAFNNVAHVGPEFAQKKTEGWAAASKALR
Ga0126370_107960351	3300010358	Tropical Forest Soil	MVVLNRRAFITVTAAGVVAPTVIAAKEEESSRMDWMTMSLEARNLAFNNVAHVGPEFAQQKTEGWAAASK
Ga0126370_116758621	3300010358	Tropical Forest Soil	MVVLDRRAFIAMTAAGVVAPTVIAAKEEESSRMGWMTMSLEARNLA
Ga0126370_119475661	3300010358	Tropical Forest Soil	MVVLNRRAFIAGTAAGVAAPTVVAAKEEESSGMGWMTMSLEARNLAFNNVAHVGPEFARQKTEGWAAASKAL
Ga0126376_102049811	3300010359	Tropical Forest Soil	MVVLNRRAFMAATAAGVVAPTVIAAKDKESSRMDWMTMSLEARNLAFNNV
Ga0126372_110200051	3300010360	Tropical Forest Soil	MGVLNRRAFMAVTAAGIVAPTVSAAKEVVAKGMDWMTMSLEERNLAFNNVAHVGPEFAQKKTEG
Ga0126378_113313131	3300010361	Tropical Forest Soil	MGVLNRRAFMAMTAAGIVAPTVSAAKEVVAKGMDWMTMSLEERNLAFNNVAHVGPEFAQKKTEGWAAAS
Ga0126378_129894042	3300010361	Tropical Forest Soil	MVVLNRRAFMAVAAAGVVAPTVIAAQEKGSSRMDWMTMSLEERNLAFNNIAHVGPEFARKKTEEW
Ga0126377_134808802	3300010362	Tropical Forest Soil	MVVLNRRAFMAVTAAGVVAPTVIAAKKVVAKRMDWMTMSLEERNLAFNNVAH
Ga0126379_105508181	3300010366	Tropical Forest Soil	MNIARRLTGAAANEVVAKGKDCMRDWMIMSLEARNLAFNNVAHVGPDFARTKTEGWAAASKALRAQRPKHLDLAYA
Ga0126379_121881381	3300010366	Tropical Forest Soil	MVVLNRRAFMAVTAAGVVAPAVIGAKAVVAKGMDWMTMSLEERNLAFNNVAHVGPEFARKKTEGWAAASKALR
Ga0126381_1008457771	3300010376	Tropical Forest Soil	MVVLNRRAFMAVTAAGVVAPTVIAAKKVVAKRMDWMTMSLEERNLAFNNVAHVGPEFAQKKTEGWAAASKALR
Ga0126381_1015904595	3300010376	Tropical Forest Soil	MVVFNRRAFMAVTAAGVVAPTVLGANEVVTKAKDCMRDWMTMSLEARNLAFNNVAHVGP
Ga0126381_1024273001	3300010376	Tropical Forest Soil	MVVLNRRAFMAVTAAGVVAPAVIGAKAVVAKGMDWMTMSLEERNLAFNNVAHV
Ga0126381_1035618271	3300010376	Tropical Forest Soil	MAVLNRRAFMAVTAAGVVAPTVTAAKEGVAKGMDWMTMSLEGRNLAFNNVAHVGPEFARKKTEE
Ga0126381_1043930351	3300010376	Tropical Forest Soil	MAVTAAGVAAPTVVAANEVVEKGKDCMRDWMTMSLGARNLAFNNVAHVGLEFARTQTEGWAAASKALRAQRPKHL
Ga0136847_136505001	3300010391	Freshwater Sediment	MVVLSRRAFMAVTAASVVAPTVIAATEVVAKGMDWMTMSLEARNLAFNNVAHVGSEFARNKTEGWAAASKTLR
Ga0134126_115571982	3300010396	Terrestrial Soil	MALTRRAFAAATAAGVVSPNIARAKECPAAGMDWMTMSLEARNLAYFNVAHVGADFARKKTESWAAASKSFRE
Ga0126383_124580881	3300010398	Tropical Forest Soil	MGVLNRRAFMAVTAAGIVAPAVIGAKAVVAKGMDWMTMSLEERNLAFNNVAHVGPE
Ga0126383_131474801	3300010398	Tropical Forest Soil	MVVLNRRAFMAVTVGVLTPPVMAAKEDGARGMDWMTMSLEARNLAFNNVAHV
Ga0124850_10124731	3300010863	Tropical Forest Soil	MVVFNRRAFMAVTAAGVVAPAVIGAKAVVAKGMDWMTISLEERNLAFNNVAHVGP
Ga0124850_10849311	3300010863	Tropical Forest Soil	MAIIRRRTFVTATAASVVAPNVARARGKECPAASMDWMTMSLEARNLAYNNGEHVGLDYARTKTESWIAASKALRE
Ga0137389_101528473	3300012096	Vadose Zone Soil	MATLNRRAFVAATAVGVAAPTVIGAKEVPKSGMDWQTMSLEARNLAYNNVE
Ga0137388_114164272	3300012189	Vadose Zone Soil	MAALNRRAFVAATAVGVAAPTVIGAKEVPKSGMDWQTMSLEARNLAYNNVAHVGPDFARQKTESWAAAS
Ga0137385_112443561	3300012359	Vadose Zone Soil	MTAINRRSFMATSAAAVVVPAIADAKECKSYDWETMSLEARNLAFNNVAHVG
Ga0126375_101512771	3300012948	Tropical Forest Soil	MAVTAAGVVAPTVVAAHEVVTKGKDCMRDWMTMSLEARNLAFNNVAHVGPEFAETKTEGWAAASKALRAQRPKHLDLAYAQGD
Ga0126375_112970002	3300012948	Tropical Forest Soil	MGVLNRRAFMAVTAAGIVAPTVSAAKEVVAKGMDWMTMSLEARNLAFNNVAHVGP
Ga0126375_118928761	3300012948	Tropical Forest Soil	MVVLNRRAFMAVTAAGVVAPAVVAANEVVAKGKDCMRDWMTMSLEARNLAVNNVAHV
Ga0164298_104177971	3300012955	Soil	MATINRRSFVAATAASVTAPAIARAKECPAAGMDWMNMSLQARNLAYNNGEHVGLDFARIKTESWIAGSKALREQR
Ga0164301_100640344	3300012960	Soil	MATINRRSFVAATAASVTAPAIARAKECPAAGMDWMNMSLQARNSAYNNGEHVGLDFARIKTESWIAGSKALREQRSKHLDLPYAPG*
Ga0164302_112687362	3300012961	Soil	MALTRRTFAAATAAGAIVPTVARAKECPATGLDWMTMSLEARNLAYFNVAHVGADFARQK
Ga0126369_100552426	3300012971	Tropical Forest Soil	MVVLNRRAFIAVTAAGVVAPTVIAAKEEESSRMDWMTMSLEARNLAFNNVAHVGPEFARQKTEGWAA
Ga0126369_112682352	3300012971	Tropical Forest Soil	MGVLNHRAFMAVTAAGIVAPMVSAAKKVVARGMNWMTMSLEERNLAFNNVAHVGPEFAQKKTE
Ga0126369_133983791	3300012971	Tropical Forest Soil	MIVLNRRAFMAVTAAGVVAPTVVAANEVVAKGKDCMRDWMTMSLEARNLAFNNVAHVGPE
Ga0182032_115701211	3300016357	Soil	MVVNRRAFIAVTAAGVVAATVIAAKEEESSRMDWMTMSLEARNLAFNNVAHVGPEFARQKTEDWAAASKAL
Ga0210403_111248682	3300020580	Soil	MALTRRAFAAATAAGVVAPTVAHAKECPPAGMDWMTMSLEARNLAYFNVAHVGADFARQKTESWAA
Ga0210401_102827871	3300020583	Soil	MALTRRAFAAATAAGVVAPTVAHAKECPPAGMDWMTMSLEARNLAYFNVAHVGNVA
Ga0210381_102688732	3300021078	Groundwater Sediment	MTAINRRTFIATTAAGAAVPTFLDAKEIAKAGMDWQTMSLEARNAAYNNVAHVGPDFARKKTEDWAAAS
Ga0194051_10957803	3300021470	Anoxic Zone Freshwater	VTAFNRRAFLAATAAGVVAPAAIATREAVAMEMDWMTMSLEARNMAFNNVAHVGPEFAGKKTEGWAAASKTLRTQRAQHLDLPYARGERSKWD
Ga0126371_101678371	3300021560	Tropical Forest Soil	MVVLNRRAFIAVTAAGVVAPTVIAAKEEESSRMDWMTMSLEARNLAFNNVAHV
Ga0126371_114697782	3300021560	Tropical Forest Soil	MGVLNRRAFMAVTAAGIVAPTVSAAKEVVAKGMDWMTMSLEERNLAFNNVAHVGPEFARKKTEGWAAASKALRAQRP
Ga0126371_129329902	3300021560	Tropical Forest Soil	MVVLNRRAFMAVTAAGVVAPTVVAANEVVAKGKDCMRDWMTMSLEARNLAFNN
Ga0126371_137797431	3300021560	Tropical Forest Soil	MAIIRRRTFVTATAASVVAPNVARGKECPAASMDWMTMSLEARNLAYNNGEHVGLDYA
Ga0126371_138105161	3300021560	Tropical Forest Soil	MVVLNRRAFMAVTTAGVLAPPVLAAIEDGARGMDWMTMSLEARNLAFNNVAHVGSAVALKKTEEWAAASKALRAERPKH
Ga0207642_104564731	3300025899	Miscanthus Rhizosphere	MATINRRSFVTAAAASVAAPSVARAKECPAAGLDWMNMSLEARNLAYNNGEHVGLDF
Ga0207700_117039791	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MALTRRAFAAATAAGFAAPTIARAKECPAAGMDWMTMSLEARNLAYFNVAHVGADFA
Ga0209684_100015112	3300027527	Tropical Forest Soil	MVVLNRRAFMAMTAAGVVAPAVIGAKGVVAKGMDWMTMSLEERKLAFNNVAHVGPE
Ga0209799_10127421	3300027654	Tropical Forest Soil	MVVLNRRAFMAMTAAGVVAPAVIGAKGVVAKGMDWMTMSLEERNLAFNNVAH
Ga0209465_104220032	3300027874	Tropical Forest Soil	MVVLNRRAFIAVTAAGVVAPTVIAAKEEESSRMDWMTMSLEARNLAFNNVAH
Ga0209465_105732611	3300027874	Tropical Forest Soil	MAMISRRAFVTATAASVATPNVAWGKECPAADMDWMTMSLEARNLAYNNGEHVGL
Ga0307301_102620331	3300028719	Soil	MTGLSRRSFAAATVVGVVAPTVTSAKEVPNAGMDWQTMSLEARNLAYNNVAHVGPDFARQKTESWAAASKVFREQRPKHL
Ga0307296_103868781	3300028819	Soil	MATINRRSFVAATAASVTAPAIARAKECPAAGMDWMNMSLQARNLAYNNGEHVGLDFARIKTESW
Ga0247827_104354182	3300028889	Soil	MAVLSRRAFLTVTAASAIAPTVSVAKGVAAKNMDWQTMSLEARNLAFNNVAHVG
Ga0311334_111591132	3300029987	Fen	MDSIDRRTFLAMASASVVAPTVLSARDGMAKDMDWQTMSLEARNLAFNNSAHVGLEFARKKMEGWAGASKLLHAGYP
Ga0310915_112746101	3300031573	Soil	MVVLNRRAFMAVTAAGVVAPAVGAKEIVAKGMDWMTMSLEERNLAFNNVAHVGSAVALKKTEEWAAASKSLRAERPKHLDLT
Ga0306923_124713551	3300031910	Soil	MFVLNRRAFIAVTAAGVVAPAVIAAKEQESSRMDWMTMSLEARNLAFNNVAHVGPEFA
Ga0310902_104352631	3300032012	Soil	MAMISRRAFVTATAASVATPNVARAKECPAAGMDWMTMSLEARNLAYNNGVHVGLDYARTKTESWIATSK
Ga0306924_102216473	3300032076	Soil	MALTRRAFAAATAAGVVAPTVARAKECPAAGMDWMTMSLEARNLAYFNVAHVGADFARQKTESWTAAS
Ga0306924_124828461	3300032076	Soil	MVVLNRRAFMAVTTVGILAPPVMEAKEDGARGMDWMTMSLEARNLAFNNVAHVGSAVALK
Ga0315271_117001831	3300032256	Sediment	MVVLNRRAFLAMTAASVVAPAVVAARELFAKGMDWQTMSLEARNLAFNNVAHVGAEFARNKTE
Ga0306920_1015170592	3300032261	Soil	MALTRRALAAATAAGVVAPTVARAKECPAAGMDWMTMSLEARNLAYFNVAHVGADF
Ga0306920_1029203801	3300032261	Soil	MVVLNRRAFIAVTAAGVVAPAVIAAKEQESSRMDWMTMSLEARNLAFNNVAHVGSEFARQKTEEWA
Ga0315286_103288422	3300032342	Sediment	MVVLNRRAFLAMTAASVVAPAVVAARELVAKGMDWQTMSLEARNLAFINVAHVGAEFARNKTEGWAAASK
Ga0316630_103058113	3300033487	Soil	MADRNRRAFMALTAAGFVVPSAIAAREAAANGMDWMTMSLEARNLAFNNVAHVGADFARKKTEAW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083217

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences