Metagenome / Metatranscriptome Family F083242

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F083242
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	69 residues
Representative Sequence	VNGGNINLTTLGSGQENAGDININAARNLNVQVGGDMNVNVIGNAIENVGKKKDEFVVGNNTKTGKKIDLN
Number of Associated Samples	83
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.35 %
% of genes from short scaffolds (< 2000 bps)	95.58 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (84.956 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (31.858 % of family members)
Environment Ontology (ENVO)	Unclassified (82.301 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (85.841 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04325	DUF465	44.25
PF11753	DUF3310	1.77
PF02675	AdoMet_dc	1.77

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	1.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.96 %
All Organisms	root	All Organisms	15.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.96 %
cellular organisms	root	All Organisms → cellular organisms	8.85 %
Viruses	superkingdom	All Organisms → Viruses	6.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.31 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.31 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	5.31 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	5.31 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	5.31 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	5.31 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Candidatus Pelagibacter sp. TMED275	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	5.31 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Candidatus Pelagibacter sp. TMED275	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	5.31 %
unclassified Flavobacterium	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Candidatus Pelagibacter sp. TMED275	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	5.31 %
Flavobacterium sp. WG21	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp. WG21	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000159\|LPaug08P2610mDRAFT_c1013802	Not Available	934	Open in IMG/M
3300001589\|JGI24005J15628_10068653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	1291	Open in IMG/M
3300001589\|JGI24005J15628_10115221	Not Available	875	Open in IMG/M
3300001589\|JGI24005J15628_10134935	Not Available	772	Open in IMG/M
3300001947\|GOS2218_1026132	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300005603\|Ga0066853_10269743	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp. WG21	560	Open in IMG/M
3300006164\|Ga0075441_10378261	Not Available	513	Open in IMG/M
3300006165\|Ga0075443_10240100	Not Available	656	Open in IMG/M
3300006193\|Ga0075445_10181785	Not Available	742	Open in IMG/M
3300006193\|Ga0075445_10183012	Not Available	739	Open in IMG/M
3300006339\|Ga0068481_1194357	Not Available	1290	Open in IMG/M
3300006343\|Ga0099699_1011143	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006352\|Ga0075448_10208147	Not Available	597	Open in IMG/M
3300006414\|Ga0099957_1125293	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300007338\|Ga0079242_1232018	Not Available	591	Open in IMG/M
3300007655\|Ga0102825_1027642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	1156	Open in IMG/M
3300007862\|Ga0105737_1119649	Not Available	673	Open in IMG/M
3300007862\|Ga0105737_1164366	Not Available	580	Open in IMG/M
3300007863\|Ga0105744_1193504	Not Available	511	Open in IMG/M
3300008221\|Ga0114916_1127220	Not Available	590	Open in IMG/M
3300009409\|Ga0114993_10600606	Not Available	809	Open in IMG/M
3300009420\|Ga0114994_10842086	Not Available	595	Open in IMG/M
3300009420\|Ga0114994_11000960	Not Available	540	Open in IMG/M
3300009425\|Ga0114997_10573021	Not Available	596	Open in IMG/M
3300009425\|Ga0114997_10576292	Not Available	594	Open in IMG/M
3300009426\|Ga0115547_1262458	Not Available	539	Open in IMG/M
3300009433\|Ga0115545_1097727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	1066	Open in IMG/M
3300009441\|Ga0115007_10443135	Not Available	853	Open in IMG/M
3300009476\|Ga0115555_1101436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	1235	Open in IMG/M
3300009481\|Ga0114932_10079146	Not Available	2063	Open in IMG/M
3300009507\|Ga0115572_10669458	Not Available	568	Open in IMG/M
3300009785\|Ga0115001_10225140	All Organisms → Viruses → Predicted Viral	1207	Open in IMG/M
3300009785\|Ga0115001_10419710	Not Available	834	Open in IMG/M
3300009785\|Ga0115001_10766547	Not Available	582	Open in IMG/M
3300009785\|Ga0115001_10946357	Not Available	517	Open in IMG/M
3300009786\|Ga0114999_10634750	Not Available	807	Open in IMG/M
3300009786\|Ga0114999_11342670	Not Available	505	Open in IMG/M
3300011252\|Ga0151674_1038787	Not Available	714	Open in IMG/M
3300012952\|Ga0163180_10043338	Not Available	2678	Open in IMG/M
3300017714\|Ga0181412_1063159	Not Available	916	Open in IMG/M
3300017740\|Ga0181418_1170842	Not Available	520	Open in IMG/M
3300017753\|Ga0181407_1140187	Not Available	599	Open in IMG/M
3300017762\|Ga0181422_1031451	Not Available	1730	Open in IMG/M
3300017762\|Ga0181422_1180817	Not Available	641	Open in IMG/M
3300017765\|Ga0181413_1124204	Not Available	782	Open in IMG/M
3300017765\|Ga0181413_1188200	Not Available	618	Open in IMG/M
3300017769\|Ga0187221_1224898	Not Available	536	Open in IMG/M
3300017773\|Ga0181386_1070774	All Organisms → Viruses → Predicted Viral	1105	Open in IMG/M
3300017773\|Ga0181386_1118427	Not Available	820	Open in IMG/M
3300017773\|Ga0181386_1236661	Not Available	542	Open in IMG/M
3300017775\|Ga0181432_1031625	Not Available	1420	Open in IMG/M
3300017776\|Ga0181394_1175761	Not Available	659	Open in IMG/M
3300017781\|Ga0181423_1101260	Not Available	1127	Open in IMG/M
3300020311\|Ga0211628_1082338	Not Available	512	Open in IMG/M
3300020335\|Ga0211690_1124541	Not Available	545	Open in IMG/M
3300020349\|Ga0211511_1081189	Not Available	769	Open in IMG/M
3300020372\|Ga0211683_10139898	Not Available	779	Open in IMG/M
3300020379\|Ga0211652_10070443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	1050	Open in IMG/M
3300020382\|Ga0211686_10246043	Not Available	736	Open in IMG/M
3300020382\|Ga0211686_10272569	Not Available	695	Open in IMG/M
3300020382\|Ga0211686_10276813	Not Available	689	Open in IMG/M
3300020382\|Ga0211686_10343484	Not Available	609	Open in IMG/M
3300020452\|Ga0211545_10301603	Not Available	733	Open in IMG/M
3300020454\|Ga0211548_10435787	Not Available	642	Open in IMG/M
3300020458\|Ga0211697_10213824	Not Available	797	Open in IMG/M
3300020462\|Ga0211546_10557900	Not Available	578	Open in IMG/M
3300020471\|Ga0211614_10375544	Not Available	627	Open in IMG/M
3300021442\|Ga0206685_10290664	Not Available	555	Open in IMG/M
3300024344\|Ga0209992_10255445	Not Available	727	Open in IMG/M
3300024348\|Ga0244776_10950749	Not Available	505	Open in IMG/M
3300025138\|Ga0209634_1067708	All Organisms → Viruses → Predicted Viral	1691	Open in IMG/M
3300025138\|Ga0209634_1103863	Not Available	1251	Open in IMG/M
3300025138\|Ga0209634_1215343	Not Available	722	Open in IMG/M
3300025168\|Ga0209337_1118991	All Organisms → Viruses → Predicted Viral	1195	Open in IMG/M
3300025168\|Ga0209337_1218412	Not Available	758	Open in IMG/M
3300025237\|Ga0208031_1049456	Not Available	530	Open in IMG/M
3300027196\|Ga0208438_1059195	Not Available	628	Open in IMG/M
3300027320\|Ga0208923_1027944	All Organisms → Viruses → Predicted Viral	1002	Open in IMG/M
3300027522\|Ga0209384_1066389	Not Available	928	Open in IMG/M
3300027686\|Ga0209071_1233058	Not Available	509	Open in IMG/M
3300027704\|Ga0209816_1245409	Not Available	567	Open in IMG/M
3300027704\|Ga0209816_1261700	Not Available	540	Open in IMG/M
3300027752\|Ga0209192_10333263	Not Available	538	Open in IMG/M
3300027771\|Ga0209279_10135907	Not Available	713	Open in IMG/M
3300027779\|Ga0209709_10392411	Not Available	552	Open in IMG/M
3300027779\|Ga0209709_10393572	Not Available	551	Open in IMG/M
3300027788\|Ga0209711_10177729	Not Available	999	Open in IMG/M
3300027791\|Ga0209830_10134078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	1200	Open in IMG/M
3300027791\|Ga0209830_10425993	Not Available	559	Open in IMG/M
3300027801\|Ga0209091_10276445	Not Available	805	Open in IMG/M
3300027801\|Ga0209091_10521615	Not Available	512	Open in IMG/M
3300027813\|Ga0209090_10471252	Not Available	591	Open in IMG/M
3300027813\|Ga0209090_10548727	Not Available	531	Open in IMG/M
3300027847\|Ga0209402_10652689	Not Available	586	Open in IMG/M
3300027859\|Ga0209503_10218890	Not Available	917	Open in IMG/M
3300027906\|Ga0209404_10482883	Not Available	818	Open in IMG/M
3300031142\|Ga0308022_1085652	Not Available	950	Open in IMG/M
3300031143\|Ga0308025_1204287	Not Available	673	Open in IMG/M
3300031143\|Ga0308025_1269285	Not Available	559	Open in IMG/M
3300031519\|Ga0307488_10355698	Not Available	921	Open in IMG/M
3300031519\|Ga0307488_10373161	Not Available	891	Open in IMG/M
3300031519\|Ga0307488_10467533	Not Available	761	Open in IMG/M
3300031598\|Ga0308019_10305126	Not Available	591	Open in IMG/M
3300031630\|Ga0308004_10208444	Not Available	791	Open in IMG/M
3300031644\|Ga0308001_10091214	All Organisms → Viruses → Predicted Viral	1287	Open in IMG/M
3300031644\|Ga0308001_10136153	Not Available	1012	Open in IMG/M
3300031774\|Ga0315331_10300510	All Organisms → Viruses → Predicted Viral	1184	Open in IMG/M
3300031774\|Ga0315331_10413365	Not Available	985	Open in IMG/M
3300032048\|Ga0315329_10235212	Not Available	967	Open in IMG/M
3300032130\|Ga0315333_10221495	Not Available	897	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	38.05%
Unclassified	Environmental → Aquatic → Marine → Unclassified	28.32%
Strait	Environmental → Aquatic → Marine → Strait	12.39%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.85%
Coastal	Environmental → Aquatic → Marine → Coastal	7.08%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.54%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	34.51%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	28.32%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	12.39%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.08%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	5.31%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.54%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.54%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.77%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	31.86%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	22.12%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	12.39%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.19%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.42%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	3.54%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.54%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.54%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	2.65%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.65%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.77%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.77%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.77%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.89%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000159	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P26 10m	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001947	Marine microbial communities from the Gulf of Maine, Canada - GS002	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006343	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0200m	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300007338	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S5 c16 DCM_B metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007655	Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579	Environmental	Open in IMG/M
3300007862	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2um	Environmental	Open in IMG/M
3300007863	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2um	Environmental	Open in IMG/M
3300008221	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009426	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300011252	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeate	Environmental	Open in IMG/M
3300011258	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300020311	Marine microbial communities from Tara Oceans - TARA_B100000475 (ERX556071-ERR599171)	Environmental	Open in IMG/M
3300020335	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX556030-ERR599035)	Environmental	Open in IMG/M
3300020349	Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289006-ERR315859)	Environmental	Open in IMG/M
3300020372	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020382	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020458	Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025237	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38 (SPAdes)	Environmental	Open in IMG/M
3300027196	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027686	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300027847	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300031142	Marine microbial communities from water near the shore, Antarctic Ocean - #353	Environmental	Open in IMG/M
3300031143	Marine microbial communities from water near the shore, Antarctic Ocean - #422	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031644	Marine microbial communities from water near the shore, Antarctic Ocean - #5	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPaug08P2610mDRAFT_10138023	3300000159	Marine	GQXAAGQTSSGDININAARNLNMNVGKDFNVNVIGKAIENVGQTKDEFVVGNNTKTGKRIDLN*
JGI24005J15628_100686534	3300001589	Marine	GQAGNNYNIEVGQGSNVNIEVNGGNINLTTLGSGQDAGDININAARNLNMQVGGDMNVNVIGQAIENIGKTKDEFVVGNNTKTGKKIDLN*
JGI24005J15628_101152211	3300001589	Marine	QGSNVNIEVNGGNINLTTLGSGQEEAGDININASRNLNVQVGGSMNVNVIGNSIENVGGKKDEFVVENNTKTGKRIDLN*
JGI24005J15628_101349352	3300001589	Marine	NLTTLGSGQDAGDININASRNLNIEVGNSMNVNVLRNSIENVGGKKDELVIGNNTKTGKKIDLN*
GOS2218_10261326	3300001947	Marine	GSGQENAGDININASRNLNVQVGNDMNVNVIGNSIENVGKKKDEFVVENNTKTGKRIDLN
Ga0066853_102697431	3300005603	Marine	SNVNVEVNGGSINLTTLSPDVGDINLNAARNLNIQVGQDMKVAVLGNASEKVVGKKDEFVEGNNTKTGKRIDLNS*
Ga0075441_103782611	3300006164	Marine	EVGQGSNVNIEVNGGNINLTTLGSGQENAGDININASRNLNVQVGGDMNVNVIGNAIENVGKKKDEFVVENNTKTGKRIDLN*
Ga0075443_102401001	3300006165	Marine	NLTTLGSGQENAGDININASRNLNVQVGGDMNVNVIGNAIENVGKKKDEFVVENNTKTGKRIDLN*
Ga0075445_101817852	3300006193	Marine	RVRVNSLGVSGNNYNIEVGQGSNVNVEVNGGNINLTTLSSGQQAAGQTTSGDININAARNLNVQVGKDFNVNVIGKAVENIALTKDEFVVGNNTKTGKKIDLN*
Ga0075445_101830121	3300006193	Marine	ININAARNLNMQVGGDMNVNVIGNSIENIAKRKDEFVVENNTKTGKKIDLN*
Ga0068481_11943574	3300006339	Marine	INLTTLSGQGDAGDININAARNLNIQVGQQMNVNVIRDSIENIGGKKDELVIGNNTKTGTRIDLN*
Ga0099699_10111432	3300006343	Marine	NVNVEVNGGNLNLTTLGSGQDAGDINLNAARDLNIQVTRNMNVNVIKNSVENIAGKKDELVVGNNTKTGKRIDLN*
Ga0075448_102081472	3300006352	Marine	SNVNVEVNGGNINLTTLSSGQQAAGQTSSGDININAARNLNVQVGKDFNVNVIGKAIENVGLTKDEFVVGNNTKTGKKIDLN*
Ga0099957_11252933	3300006414	Marine	VNGGNINLTTLSSGQAAAGQTTAGDININAARNLNIQVGQQMNVNVIRDSIENIGGKKDEFVVGNNTKTGKRIDLN*
Ga0079242_12320181	3300007338	Marine	LTTLGSGQDAGDINLNAARDLNIQVTRNMNVNVIKDSVENIAGKKDELVVGNNTKTGKRIDLN*
Ga0102825_10276421	3300007655	Estuarine	NGGNINLTTLGSGQDAGDININASRNLNIQVGNQMNVNVIRNSIENIGGKKDEFVVGNNTKTGKKIDLN*
Ga0105737_11196492	3300007862	Estuary Water	VNIEVNGGNINLTTLGSGQDAGDININASRNLNMQVGGDMNVNVIGQAIENIGKTKDEFVVGNNTKTGKKIDLN*
Ga0105737_11643661	3300007862	Estuary Water	QTSSGDININAARNLNMNVGKDFNVNVIGKAIENVGQTKDEFVVGNNTKTGKRIDLN*
Ga0105744_11935041	3300007863	Estuary Water	GQTSSGDININAARNLNMNVGKDFNVNVIGKAIENVGQTKDEFVVGNNTKTGKRIDLN*
Ga0114916_11272202	3300008221	Deep Ocean	GQENAGDININASRNLNVQVGGDMNVNVIGNAIENVGKKKDEFVVENNTKTGKRIDLN*
Ga0114993_106006062	3300009409	Marine	YNIEVGQGSNVNVEVNGGNINLTTLGSGQDAGDININASRNLNVEVGGDMNVNVIGKAIENVAKTKDEFVIGNNTKTGKRIDLN*
Ga0114994_108420862	3300009420	Marine	AAGQTSAGDININAARNLNMNVGGNMNVNVIGKSVEEIGQTKDEFVVGINTKTGQKIDLN
Ga0114994_110009602	3300009420	Marine	TTLGSGQDAGDININASRNLNIEVGNQMNVNVLRDSIENVGGKKDELVVGNNTKTGKKIDLN*
Ga0114997_105730212	3300009425	Marine	SNVNVEVNGGNINLTTLGSGQEGAGDINLNAARNLNIEVGGDMNVNVIGAAIENVAKTKDEFVVGNNTKTGKRIDLN*
Ga0114997_105762922	3300009425	Marine	GQENAGDININASRNLNVQVGNDMNVNVIGNSIENVGKKKDEFVVENNTKTGKRIDLN*
Ga0115547_12624581	3300009426	Pelagic Marine	QAAAGQTTSGDININAARNLNMNVGKDFNVNVIGKAVEEIGLSKDEFVVGNNTKTGKKIDLN*
Ga0115545_10977271	3300009433	Pelagic Marine	NINASRNLNIQVGNQMNVNVIRNSIENIGGKKDEFVVGNNTKTGKKIDLN*
Ga0115007_104431351	3300009441	Marine	VNGGNINLTTLGSGQEEAGDININASRNLNVQVGGDMNVNVIGNSIENVGGKKDEFVVENNTKTGKRIDLN*
Ga0115555_11014361	3300009476	Pelagic Marine	INLTTLGSGQDAGDVNINASRNLNIQVGNQMNVNVIRDSIENIGGKKDEFVVGNNTKTGKKIDLN*
Ga0114932_100791461	3300009481	Deep Subsurface	GGNINLTTLGSGQDAGDININASRNLNMQVGNQMNVNVIRDSIENIGGKKDEFVVGNNTKTGKKIDLN*
Ga0115572_106694581	3300009507	Pelagic Marine	INLTTLGSGQDAGDININASRNLNMQVGGDMNVNVIGQAIENIGKTKDEFVVGNNTKTGKKIDLN*
Ga0115001_102251401	3300009785	Marine	IEVGQGSNVNVEVNGGNINLTTLGSGQDAGDININASRNLNIEVGNQMNVNVLRDSIENVGGKKDELVVGNNTKTGKKIDLN*
Ga0115001_104197101	3300009785	Marine	AAGQTSSGDININAARNLNMNVGKDFNVNVIGKAIENVGQTKDEFVVGNNTKTGKRIDLN
Ga0115001_107665471	3300009785	Marine	NIEVNGGNINLTTLGSGQEEAGDININASRNLNVQVGGSMNVNVIGNSIENVGGKKDEFVVENNTKTGKRIDLN*
Ga0115001_109463572	3300009785	Marine	EVGQGSNVNIEVNGGNINLTTLGSGQEDAGDININASRNLNVQVGGDMNVNVIGNSIENVGGRKDEFVVENNTKTGKKIDLN*
Ga0114999_106347502	3300009786	Marine	NIEVNGGNINLTTLGSGQEEAGDININASRNLNLQVGGDMNVNVIGSSIENVGGRKDEFVVENNTKTGKKIDLN*
Ga0114999_113426701	3300009786	Marine	SNVNIEVNGGNINLTTLGSGQESAGDININAARNLNMQVGGDMNVNVIGNSIENVAKRKDEFVVENNTKTGKKIDLN*
Ga0098059_11951741	3300010153	Marine	NAARNLNIQVGQQMNVNVVRDSIENIGGKKDELVIGRNTKTGSRIDLN*
Ga0151674_10387871	3300011252	Marine	VNIEVNGGNINLTTLGSGQAAAGQTTAGDININAARNLNMNVGKDFNVNVIGQAIENIGGKKDEFVVGNNTKTGKK
Ga0151677_10692871	3300011258	Marine	VNGGNINLTTLQTGADGGDVNINASRDLNMQVARNMNVNIIGNNVENVAGKKDEFVIGDNTKTGKNINLN*
Ga0163180_100433387	3300012952	Seawater	DININASRNLNIQVGNQMNVNVIRDSIENVGGKKDEFVVGNNTKTGKKIDLN*
Ga0181412_10631591	3300017714	Seawater	GGNINLTTLGSGQDAGDVNINASRNLNIQVGNQMNVNVIRDSIENIGGKKDELVIGNNTKTGKKIDLN
Ga0181418_11708421	3300017740	Seawater	GNINLTTLGSGEEDAGDININASRNLNIQVGNQMNVNVIRDSIENIGGKKDEFVVGNNTKTGKKIDLN
Ga0181407_11401871	3300017753	Seawater	INASRNLNIQVGNQMNVNVIRDSIENIGGKKDELVIGNNTKTGKKIDLN
Ga0181422_10314516	3300017762	Seawater	VGQGSNVNIEVNGGNINLTTLGSGQDAGDVNINASRNLNIQVGNQMNVNVIRDSIENVGGKKDEFVVGNNTKTGKKIDLN
Ga0181422_11808171	3300017762	Seawater	VGQGSNVNIEVNGGNINLTTLGSGQDAGDVNINASRNLNIQVGNQMNVNVIRDSIENIGGKKDELVIGNNTKTGKKIDLN
Ga0181413_11242043	3300017765	Seawater	AGDINLNASRNLNIQVGNQMNVNVIRDSTENIGAKKDEIVIGNNTKTGKKIDLN
Ga0181413_11882002	3300017765	Seawater	AGDINLNASRNLNIQVGNQMNVNVIRDSIENIGGKKDELVIGNNTKTGKKIDLN
Ga0187221_12248982	3300017769	Seawater	GNINLTTLGSGQESAGDININAARNLNMQVGGDMNVNVIGNSIENVAKRKDEFVVENNTKTGKKIDLN
Ga0181386_10707744	3300017773	Seawater	NIEVGNGSNVNVEVNGGNINLTTLSSGQQAAGQTSSGDININAARNLNMQVGGDMNVNVIGKAIENVAKTKDEFVVGNNTKTGKRIDLN
Ga0181386_11184271	3300017773	Seawater	GQDAGDVNINASRNLNIQVGNQMNVNVIRDSIENIGGKKDELVIGNNTKTGKKIDLN
Ga0181386_12366611	3300017773	Seawater	GQDAGDVNINASRNLNIQVGNQMNVNVIRDSIENIGGKKDEIVIGNNTKTGKKIDLN
Ga0181432_10316251	3300017775	Seawater	TGNNYNVEVGSGSNVNIEVNGGNINLTTLSSGQAAAGQTTSGDININAARNLNIQVGAQMNVNVIRDSIENIGGKKDEFVVGNNTKTGKRIDLN
Ga0181394_11757611	3300017776	Seawater	VGQGSNVNVEVNGGNINLTTLGSGQDAGDININASRNLNIQVGNSMNVNVIRDSIENVGGKKDELVVGNNTKTGKKIDLN
Ga0181423_11012601	3300017781	Seawater	GSNVNVEVNGGNINLTTLGSGQDAGDININASRNLNIQVGNQMNVNVIRDSIENVGGKKDEFVVGNNTKTGKKIDLN
Ga0211628_10823381	3300020311	Marine	QGSNVNIEVNGGNINLTTLGSGQDAGDININASRNLNIQVGNQMNVNVIRDSIENVGGKKDEFVVGNNTKTGKKIDLN
Ga0211690_11245412	3300020335	Marine	TTLSSGQQAAGQTSSGDININAARNLNMNVGKDFNVNVIGKAIENVGQTKDEFVVGNNTKTGKRIDLN
Ga0211511_10811892	3300020349	Marine	GKAGNNYNIEVGQGSNVNVEVNGGNLNLTTLGSGQDAGDINLNAARDLNIQVTRNMNVNVIKDSVENIAGKKDELVVGNNTKTGKRIDLN
Ga0211683_101398983	3300020372	Marine	GNINLTTLGSGQENAGDININASRNLNVNVGKDFNVNVIGKAVEEVGLSKDEFVVGNNTKTGKKIDLN
Ga0211652_100704433	3300020379	Marine	NINASRNLNMQVQGDMNVNVIGNSIENVGKRKDEFVVLNNTKTGKRIDLN
Ga0211686_102460431	3300020382	Marine	QGSNVNIEVNGGNINLTTLGSGQENAGDININASRNLNMQVGGDMNVNVIGNAIENVGKKKDEFVVENNTKTGKRIDLN
Ga0211686_102725692	3300020382	Marine	DAGDININASRNLNIEVGNSMNVNVLRNSIENVGGKKDELVIGNNTKTGKKIDLN
Ga0211686_102768131	3300020382	Marine	QGSNVNIEVNGGNINLTTLGSGQENAGDININASRNLNVQVGGDMNVNVIGNAIENVGKKKDEFVVENNTKTGKRIDLN
Ga0211686_103434841	3300020382	Marine	NLTTLGSGQENAGDININASRNLNVQVGNDMNVNVIGNSIENVGKKKDEFVVDNNTKTGKKIDLN
Ga0211521_104914591	3300020428	Marine	RIRVNAKGATGNNYNVEVGSGSNVNIEVNGGNINLTTLGSGQAAAGQTTAGDININAARNLNMNVGKDFNVNVIGKAIEEIGLTKDEFVVGNNTKTGKKIDLN
Ga0211545_103016031	3300020452	Marine	SGQDAGDININASRNLNIQVGNQMNVNVIRDSIENIGGKKDEFVVGNNTKTGKKIDLN
Ga0211548_104357871	3300020454	Marine	VNVEVNGGNLNLTTLGSGQDAGDINLNAARDLNIQVTRNMNVNVIKNSVENIAGKKDELVVGNNTKTGKRIDLN
Ga0211697_102138242	3300020458	Marine	IEVNGGNINLTTLGSGQDAGDININATRNLNMQVGGDMNVNVIGKAIENIAKTKDEFVVGNNTKTGKKIDLN
Ga0211546_105579001	3300020462	Marine	DININASRNLNIQVGNQMNVNVIRDSVENIGGKKDEFVVGNNTKTGKKIDLN
Ga0211614_103755442	3300020471	Marine	VNIEVNGGDINLTTLGSAGDSGDININAARDLNVQVARHMNVNVVRNAIENVGGKKDELVIGNNKKTGSRIDLN
Ga0206685_102906642	3300021442	Seawater	TLSSGQAAAGQTTAGDININAARNLNIQVGQQMNVNVIRDSIENIGGKKDEFVVGNNTKTGKRIDLN
Ga0209992_102554451	3300024344	Deep Subsurface	LTTLGSGQDAGDININASRNLNIQVGNQMNVNVIRDSIENIGGKKDEFVVGNNTKTGKKIDLN
Ga0244776_109507492	3300024348	Estuarine	TLGSGQESAGDININAARNLNMQVGGDMNVNVIGNSIENVAKRKDEFVVENNTKTGKKIDLN
Ga0209634_10677081	3300025138	Marine	INAARNLNMQVGGDMNVNVIGKAIENVAKTKDEFVVGNNTKTGKRIDLN
Ga0209634_11038631	3300025138	Marine	VGQGSNVNIEVNGGNINLTTLGSGQEDAGDININASRNLNLQVGGNMNVNVIGNSIENIGKKKDEFVVEGNTKTGKRIDLN
Ga0209634_12153431	3300025138	Marine	QGSNVNIEVNGGNINLTTLGSGQEEAGDININAARNLNMQVGGDMNVNVIGKAIENIGKTKDEFVVDNNTKTGKRIDLN
Ga0209337_11189911	3300025168	Marine	ININASRNLNVEVGGDMNVNVIGKAIENVAKTKDEFVIGNNTKTGKRIDLN
Ga0209337_12184121	3300025168	Marine	VNGGNINLTTLGSGQEDAGDININASRNLNVQVGGDMNVNVIGNSIENVGKRKDEFVVEGNTKTGKRIDLN
Ga0208031_10494562	3300025237	Deep Ocean	SGQENAGDININASRNLNVQVGGDMNVNVIGNAIENVGKKKDEFVVENNTKTGKRIDLN
Ga0208438_10591952	3300027196	Estuarine	SSGQQAAGQTSSGDININAARNLNMNVGKDFNVNVIGKAIENVGQTKDEFVVGNNTKTGKRIDLN
Ga0208923_10279444	3300027320	Estuarine	SGDININAARNLNMNVGKDFNVNVIGKAIENVGQTKDEFVVGNNTKTGKRIDLN
Ga0209384_10663891	3300027522	Marine	VNGGNINLTTLGSGQENAGDININAARNLNVQVGGDMNVNVIGNAIENVGKKKDEFVVGNNTKTGKKIDLN
Ga0209071_12330582	3300027686	Marine	NINASRNLNVQVGGDMNVNVIGNAIENVGKKKDEFVVGNNTKTGKKIDLN
Ga0209816_12454091	3300027704	Marine	VNGGNINLTTLGSGQENAGDININAARNLNMQVGGDMNVNVIGNSIENVGKKKDEFVVDNNTKTGKKIDLN
Ga0209816_12617001	3300027704	Marine	GQGSNVNVEVNGGNINLTTLSSGEDAGDININASRNLNVQVGNDMNVNVIGKAIENVAKTKDEFVVGNNRKTGKKIDLN
Ga0209192_103332631	3300027752	Marine	NIEVGQGSNVNIEVNGGNINLTTLGSGQEDAGDININAARNLNMQVGGDMNVNVIGKAIENVAKTKDEFVVGNNTKTGKRIDLN
Ga0209279_101359072	3300027771	Marine	NYNIEVGQGSNVNIEVNGGNINLTTLGSGQDAGDININAARNLNMQVGGDMNVNVIGNSIENIAKRKDEFVVENNTKTGKKIDLN
Ga0209709_103924112	3300027779	Marine	TLSSGQQAAGQTSSGDININAARNLNMNVGKDFNVNVIGKAIENVGQTKDEFVVGNNTKTGKRIDLN
Ga0209709_103935721	3300027779	Marine	VNVEVNGGNINLTTLGSGQDAGDININASRNLNIEVGNQMNVNVLRDSIENVGGKKDELVVGNNTKTGKKIDLN
Ga0209711_101777294	3300027788	Marine	TLGSGQEGAGDININASRNLNVQVGGNMNVNVIGNSIENVGKKKDEFVVENNTKTGKKIDLN
Ga0209830_101340784	3300027791	Marine	GQENAGDININASRNLNVQVGNDMNVNVIGNSIENVGKKKDEFVVENNTKTGKRIDLN
Ga0209830_104259932	3300027791	Marine	NLTTLGSGQEDAGDININASRNLNLQVGGNMNVNVIGNSIENVGKKKDEFVVEGNTKTGKRIDLN
Ga0209091_102764451	3300027801	Marine	VNGGNINLTTLGSGQEEAGDININASRNLNVQVGGDMNVNVIGSSIENVGGRKDEFVVENNTKTGKKIDLN
Ga0209091_105216152	3300027801	Marine	YNVEVGQGSNVNIEVNGGNINLTTLGSGQEDAGDININASRNLNVQVGGDMNVNVIGNAIENVGKKKDEFVVENNTKTGKKIDLN
Ga0209090_104712522	3300027813	Marine	TTLGSGQEGAGDINLNAARNLNIEVGGDMNVNVIGAAIENVAKTKDEFVVGNNTKTGKRIDLN
Ga0209090_105487271	3300027813	Marine	ININASRNLNVQVGGDMNVNVIGSSIENVGGRKDEFVVENNTKTGKKIDLN
Ga0209402_106526891	3300027847	Marine	VNVEVNGGNINLTTLGSGQDAGDININASRNLNIEVGNSMNVNVLRNSIENVGGKKDELVIGNNTKTGKKIDLN
Ga0209503_102188901	3300027859	Marine	LNLTTLGSGQDAGDINLNAARDLNIQVTRNMNVNVIKDSVENIAGKKDELVVGLNTKTGKEINLN
Ga0209404_104828831	3300027906	Marine	AGQTTAGDININAARNLNIQVGQQMNVNVVRDSIENIGGKKDELVIGRNTKTGSRIDLN
Ga0308022_10856523	3300031142	Marine	QGSNVNIEVNGGNINLTTLGSGQESAGDININAARNLNMQVGGDMNVNVIGNSIENIAKRKDEFVVENNTKTGKKIDLN
Ga0308025_12042871	3300031143	Marine	GQGSNVNVEVNGGNINLTTLGSGQENAGDININASRNLNVQVGGDMNVNVIGNAIENVGKKKDEFVVGNNTKTGKKIDLN
Ga0308025_12692852	3300031143	Marine	INLTTLGSGQDAGDININASRNLNIEVGNSMNVNVLRNSIENVGGKKDELVIGNNTKTGKKIDLN
Ga0307488_103556983	3300031519	Sackhole Brine	LTTLSTGDEEAGDININASRNLNVQVNGDMNVAVLGKSVENVSGTKDEFVVDVNTKTGKTIQLNP
Ga0307488_103731613	3300031519	Sackhole Brine	DININAARNLNMQVGGDMNVNVIGNSIENVGKKKDEFVVGNNTKTGKKIDLN
Ga0307488_104675333	3300031519	Sackhole Brine	GQAAAGQTSAGDININAARNLNMNVGGNMNVNVIGKSVEEIGQTKDEFVVGINTKTGQKIDLN
Ga0308019_103051261	3300031598	Marine	YNIEVGQGSNVNIEVNGGNINLTTLGSGQENAGDININASRNLNMQVGGDMNVNVIGNAIENVGKKKDEFVVENNTKTGKRIDLN
Ga0308004_102084443	3300031630	Marine	TLGSGQENAGDININASRNLNVQVGGDMNVNVIGNAIENVGKKKDEFVVGNNTKTGKKIDLN
Ga0308001_100912141	3300031644	Marine	NAGDININAARNLNMQVGGDMNVNVIGNSIENVGKRKDEFVVDNNTKTGKKIDLN
Ga0308001_101361531	3300031644	Marine	VNVEVNGGNINLTTLSSGQQAAGQTSSGDININAARNLNVQVGKDFNVNVIGKAIENVGLTKDEFVVGNNTKTGKKIDLN
Ga0315331_103005104	3300031774	Seawater	VNGGNINLTTLSSGQQAAGQTSSGDININAARNLNMNVGKDFNVNVIGKAIENVGQTKDEFVVGNNTKTGKRIDLN
Ga0315331_104133654	3300031774	Seawater	QGSNVNIEVNGGNINLTTLGSGQDAGDINLNASRNLNIQVGNQMNVNVIRDSIENIGGKKDELVIGNNTKTGKKIDLN
Ga0315329_102352121	3300032048	Seawater	LTTLSSGQAAAGQTTAGDININAARNLNIQVGQQMNVNVIRDSIENIGGKKDELVVGNNTKTGTRIDLN
Ga0315333_102214953	3300032130	Seawater	GQAAAGQTTAGDININAARNLNIQVGQQMNVNVIRDSIENIGGKKDEFVVGNNTKTGKRIDLN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083242

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences