NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F083436

Metagenome Family F083436

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F083436
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 95 residues
Representative Sequence MAKDTNATKAVGLLIEAANADTVYRDLYLRRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQAANLSAQAESLRQRKAAMGQLA
Number of Associated Samples 101
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 97.32 %
% of genes near scaffold ends (potentially truncated) 92.92 %
% of genes from short scaffolds (< 2000 bps) 94.69 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (89.381 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(8.850 % of family members)
Environment Ontology (ENVO) Unclassified
(30.973 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(33.628 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 68.29%    β-sheet: 0.00%    Coil/Unstructured: 31.71%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF01740STAS 26.55
PF03976PPK2 19.47
PF00939Na_sulph_symp 2.65
PF00916Sulfate_transp 1.77
PF00999Na_H_Exchanger 1.77
PF01699Na_Ca_ex 0.88
PF09364XFP_N 0.88
PF02371Transposase_20 0.88
PF00534Glycos_transf_1 0.88
PF02823ATP-synt_DE_N 0.88
PF02321OEP 0.88
PF00691OmpA 0.88
PF06826Asp-Al_Ex 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG2326Polyphosphate kinase 2, PPK2 familyEnergy production and conversion [C] 19.47
COG0471Di- and tricarboxylate antiporterCarbohydrate transport and metabolism [G] 2.65
COG1055Na+/H+ antiporter NhaD or related arsenite permeaseInorganic ion transport and metabolism [P] 2.65
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 1.77
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 1.77
COG0659Sulfate permease or related transporter, MFS superfamilyInorganic ion transport and metabolism [P] 1.77
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.77
COG2233Xanthine/uracil permeaseNucleotide transport and metabolism [F] 1.77
COG2252Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) familyNucleotide transport and metabolism [F] 1.77
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 1.77
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 1.77
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 1.77
COG0355FoF1-type ATP synthase, epsilon subunitEnergy production and conversion [C] 0.88
COG0387Cation (Ca2+/Na+/K+)/H+ antiporter ChaAInorganic ion transport and metabolism [P] 0.88
COG0530Ca2+/Na+ antiporterInorganic ion transport and metabolism [P] 0.88
COG2985Uncharacterized membrane protein YbjL, putative transporterGeneral function prediction only [R] 0.88
COG3547TransposaseMobilome: prophages, transposons [X] 0.88

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.38 %
UnclassifiedrootN/A10.62 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664022|INPgaii200_c1209714All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300000550|F24TB_10876638All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10073849All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300000655|AF_2010_repII_A100DRAFT_1034296All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300000953|JGI11615J12901_10157030All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia1081Open in IMG/M
3300001372|YBBDRAFT_1164617All Organisms → cellular organisms → Bacteria1454Open in IMG/M
3300004013|Ga0055465_10328517All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geotalea → Geotalea uraniireducens531Open in IMG/M
3300004027|Ga0055459_10183978Not Available578Open in IMG/M
3300004057|Ga0055496_10000257All Organisms → cellular organisms → Bacteria → Proteobacteria4339Open in IMG/M
3300004071|Ga0055486_10088037Not Available688Open in IMG/M
3300004114|Ga0062593_101930866Not Available653Open in IMG/M
3300004281|Ga0066397_10164969All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300004463|Ga0063356_102072349All Organisms → cellular organisms → Bacteria → Proteobacteria863Open in IMG/M
3300004633|Ga0066395_10496577All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300005172|Ga0066683_10205279All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas1217Open in IMG/M
3300005180|Ga0066685_10725200All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium680Open in IMG/M
3300005289|Ga0065704_10739281All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300005331|Ga0070670_100275668All Organisms → cellular organisms → Bacteria → Proteobacteria1468Open in IMG/M
3300005332|Ga0066388_102183675All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300005332|Ga0066388_102878716All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300005341|Ga0070691_10443363All Organisms → cellular organisms → Bacteria → Proteobacteria740Open in IMG/M
3300005354|Ga0070675_101913102All Organisms → cellular organisms → Bacteria → Proteobacteria547Open in IMG/M
3300005467|Ga0070706_101566127All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300005713|Ga0066905_101685703All Organisms → cellular organisms → Bacteria → Proteobacteria582Open in IMG/M
3300005937|Ga0081455_10272876All Organisms → cellular organisms → Bacteria1226Open in IMG/M
3300006844|Ga0075428_100019472All Organisms → cellular organisms → Bacteria7510Open in IMG/M
3300006853|Ga0075420_100508623All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300006854|Ga0075425_101230195All Organisms → cellular organisms → Bacteria → Proteobacteria850Open in IMG/M
3300007076|Ga0075435_100337582All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1291Open in IMG/M
3300007255|Ga0099791_10399905All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300009053|Ga0105095_10833322Not Available517Open in IMG/M
3300009111|Ga0115026_11361558All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria585Open in IMG/M
3300009147|Ga0114129_12960650All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter vulgaris560Open in IMG/M
3300009162|Ga0075423_10641806All Organisms → cellular organisms → Bacteria → Proteobacteria1120Open in IMG/M
3300009166|Ga0105100_11053139All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300009553|Ga0105249_12253704All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium617Open in IMG/M
3300009801|Ga0105056_1037543All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300009823|Ga0105078_1032955All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300010043|Ga0126380_10271003All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1189Open in IMG/M
3300010046|Ga0126384_11793214All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300010047|Ga0126382_10698299All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300010358|Ga0126370_10914011All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300010359|Ga0126376_12968679All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300010360|Ga0126372_11205638All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300010362|Ga0126377_10790639All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300012143|Ga0137354_1080251All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae518Open in IMG/M
3300012171|Ga0137342_1027176All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1075Open in IMG/M
3300012201|Ga0137365_10713262All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300012206|Ga0137380_11049331All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300012353|Ga0137367_10665469All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300012355|Ga0137369_11128279All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300012361|Ga0137360_10761665All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300012484|Ga0157333_1029378All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300012519|Ga0157352_1030085All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300012685|Ga0137397_11009226All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300012944|Ga0137410_11794555All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300012948|Ga0126375_10437530All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300012948|Ga0126375_11180063All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300014254|Ga0075312_1100807Not Available601Open in IMG/M
3300014866|Ga0180090_1083880All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300014872|Ga0180087_1103546All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300014885|Ga0180063_1156913All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300014885|Ga0180063_1227232All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300015245|Ga0137409_10097651All Organisms → cellular organisms → Bacteria2729Open in IMG/M
3300015254|Ga0180089_1061559All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium753Open in IMG/M
3300015255|Ga0180077_1058642All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300015264|Ga0137403_10832897All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300015371|Ga0132258_12424451All Organisms → cellular organisms → Bacteria → Proteobacteria1314Open in IMG/M
3300015372|Ga0132256_100296244All Organisms → cellular organisms → Bacteria → Proteobacteria1700Open in IMG/M
3300016404|Ga0182037_10163726All Organisms → cellular organisms → Bacteria → Proteobacteria1690Open in IMG/M
3300018067|Ga0184611_1300842All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300018072|Ga0184635_10149026All Organisms → cellular organisms → Bacteria → Proteobacteria934Open in IMG/M
3300018076|Ga0184609_10239639All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300018081|Ga0184625_10149893All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300018081|Ga0184625_10192852All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1068Open in IMG/M
3300018084|Ga0184629_10103947All Organisms → cellular organisms → Bacteria → Proteobacteria1393Open in IMG/M
3300018084|Ga0184629_10643819Not Available537Open in IMG/M
3300019377|Ga0190264_10491973All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300019377|Ga0190264_12174867All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300020583|Ga0210401_10668149All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300021560|Ga0126371_11858322Not Available722Open in IMG/M
3300022534|Ga0224452_1195507All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300025313|Ga0209431_10512851All Organisms → cellular organisms → Bacteria → Proteobacteria911Open in IMG/M
3300025567|Ga0210076_1148239All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300025925|Ga0207650_10368311All Organisms → cellular organisms → Bacteria1185Open in IMG/M
3300025934|Ga0207686_11079316All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300026052|Ga0208289_1010424Not Available710Open in IMG/M
3300026324|Ga0209470_1141097All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1062Open in IMG/M
3300027614|Ga0209970_1028452All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300027876|Ga0209974_10006349All Organisms → cellular organisms → Bacteria → Proteobacteria4129Open in IMG/M
3300027876|Ga0209974_10073347All Organisms → cellular organisms → Bacteria → Proteobacteria1170Open in IMG/M
3300027909|Ga0209382_10452371All Organisms → cellular organisms → Bacteria1422Open in IMG/M
3300027909|Ga0209382_10462572All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1403Open in IMG/M
3300027909|Ga0209382_10856214All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300030006|Ga0299907_10336853All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1224Open in IMG/M
3300031198|Ga0307500_10061969All Organisms → cellular organisms → Bacteria → Proteobacteria930Open in IMG/M
3300031200|Ga0307496_10062321All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300031446|Ga0170820_17202606All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300031562|Ga0310886_10892487All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300031820|Ga0307473_10830514All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300032001|Ga0306922_10474543All Organisms → cellular organisms → Bacteria → Proteobacteria1335Open in IMG/M
3300032174|Ga0307470_10578400All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300032174|Ga0307470_10689421All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300032205|Ga0307472_100073434All Organisms → cellular organisms → Bacteria2242Open in IMG/M
3300033480|Ga0316620_11050415All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300033486|Ga0316624_11022911All Organisms → cellular organisms → Bacteria → Proteobacteria745Open in IMG/M
3300033513|Ga0316628_100435854All Organisms → cellular organisms → Bacteria → Proteobacteria1676Open in IMG/M
3300034090|Ga0326723_0271526All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300034090|Ga0326723_0504395Not Available556Open in IMG/M
3300034147|Ga0364925_0313984Not Available588Open in IMG/M
3300034354|Ga0364943_0185213Not Available761Open in IMG/M
3300034354|Ga0364943_0440846All Organisms → cellular organisms → Bacteria507Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.85%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.96%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil7.08%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.31%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.42%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.42%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.54%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere3.54%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.65%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.65%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.65%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.77%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.77%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.77%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.77%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.89%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine0.89%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.89%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000655Forest soil microbial communities from Amazon forest - 2010 replicate II A100EnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300001372YB-Back-sedEnvironmentalOpen in IMG/M
3300004013Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2EnvironmentalOpen in IMG/M
3300004027Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D2EnvironmentalOpen in IMG/M
3300004057Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2EnvironmentalOpen in IMG/M
3300004071Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009801Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30EnvironmentalOpen in IMG/M
3300009823Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300012143Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT790_2EnvironmentalOpen in IMG/M
3300012171Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2EnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012484Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510EnvironmentalOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300014254Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2EnvironmentalOpen in IMG/M
3300014866Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10DEnvironmentalOpen in IMG/M
3300014872Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10DEnvironmentalOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015254Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10DEnvironmentalOpen in IMG/M
3300015255Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10DEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300025567Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026052Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300027614Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031200Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_SEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_120971422228664022SoilMAKDKNATNVVGLLXEVANXDTVYRDLYLRRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQAANLSAQAESLRQ
F24TB_1087663823300000550SoilMAQAKGKGTDATKVVGLLIETANGDTVYRDLYLRRARQLLGATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQAANLSAQADSLRQRKTAMGQLAAIGKDVYDA
AF_2010_repII_A1DRAFT_1007384913300000597Forest SoilMAKDKNATKVVGLLVEAANADTVYRDLYLRRARQLLSATLDESAYRAIGTGEKEIEDLMRRSRSAVLQRDWAQAAQLSAQ
AF_2010_repII_A100DRAFT_103429613300000655Forest SoilMAKDKNATKVVGLLVEAANADTVYRDLYLRRARQLLSATLDESAYQAIGSGEKEIEDLMRRSRSAVLQRDWAQAAQLSA
JGI11615J12901_1015703023300000953SoilMAKDPNTIKTVGLLVEVAKGDTVYRDIHLRRARQLLSSIFDEANYRAVGSSEKEIEDLTSRSRTAVLHREWAQAAEIS
YBBDRAFT_116461713300001372Marine EstuarineMSKDANTLKIVGLLVDVAKLDTVYRDIHLRRARQLLRTTLDESAYRSIGTTEREIDELMPRSRTAVLHRDW
Ga0055465_1032851713300004013Natural And Restored WetlandsMAQDANTIKAVNLLVEVAKLDTVYRDLHLRRARELLSSTLDEASYRAIGSTEKEIEDLTCRSRTAVLHRDWAQAAELSGQIDGMRQRLTRMGKLAD
Ga0055459_1018397813300004027Natural And Restored WetlandsMSKDANTLKIVGLLVDVAKLDTVYRDLHLRRARQLLSSVLDEASYRALGSIATEIEDLTRRSRTAVLHREWGQAAEASARIETLRQRQATTRNLAVLGKEVYEADP
Ga0055496_1000025713300004057Natural And Restored WetlandsMAKDANSLKIVGLLVEVARGDTVYRDIHLGRARELLGSIFDEANYRAIGSSEKEIEDLTRRSRTAVLHREWGQAAELSARIESLRQRLATTRNLAVMGKEVYEADPVVFEPFS
Ga0055486_1008803723300004071Natural And Restored WetlandsMAKDANSLKIVALLVEVARGDTVYRDIHLGRARELLGSIFDEANYRAIGSSEMEIEDLTRRSRTAVLHREWGQAAELSARIESLRQRLATTRNLAVMGKEVYE
Ga0062593_10193086613300004114SoilMAQDANTIKAVNLLVEVAKLDTVYRDLHLRRARELLSSTLDEASYRAIGSTEKEIEDLTCRSRTAVLHRDWAQAADLSGQIDGMRQRLTKMGKLADIGKEVYEPDVIAFDPF
Ga0066397_1016496923300004281Tropical Forest SoilMAKDKNATKVVGLLVEVANADAVYRDLYLRRARQLLSATLDESAYRAIGSGEKEIEDLMRRSRSAVLQRDWAQA
Ga0063356_10207234913300004463Arabidopsis Thaliana RhizosphereMAKDANTIKIVNLLVEVAKLDTVYRDVHLRRARQLLISTLDESAYRAIGSTEKEIEDITRRSRTAVLQRDWAQAAELSGQIDGMRQRLTSMGRLADI
Ga0066395_1049657713300004633Tropical Forest SoilMAKDPNAMKIVGLLIEVANADTVYRDLYLRRARQLLSAVFDESAYRAVASTDKEIEDLMRRSRSAVLQRKWDQAAQLSAQAERLRQRKAAMGNMAAIGKEVYDTDTVAFD
Ga0066683_1020527923300005172SoilMAEDKNATQVVGLLVEVANADTVYRDLYLRRARQLLGATLDESAYRAIASIDKEIEDLMRHSRSVALQRNWDQAAKLSAEVEGLRR*
Ga0066685_1072520023300005180SoilTQVVGLLVEVANADTVYRDLYLRRARQLLGATLDESAYRAIASIDKEIEDLMRHSRSVALQRNWDQAAKLSAEVEGLRR*
Ga0065704_1073928113300005289Switchgrass RhizosphereMAKDTNATKAVGLLIEAANADTVYRDLYLRRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQAANLSAQAESLRQRKAAMGQLA
Ga0070670_10027566823300005331Switchgrass RhizosphereMAKDPNTIKTVGLLVEVAKGDTVYRDIHLRRARQLLSSTFDEANYRAVGSSEKEIEDLTSRSRTAVLHREWAQAAEISARIEDLRQRLA
Ga0066388_10218367513300005332Tropical Forest SoilMAKDTNVTKAVGLLIEVANADTVYRDLFLRRARELLSATLDESGYRAIGSTDKEIEDLMRRSRSAVLQRDWDQVAQLSAQADGLRQRKAAMGNLATIGKDVYDADTVAFDPFSP
Ga0066388_10287871613300005332Tropical Forest SoilMAKDANTTKAVGLLIEAANADTVYRDVHLRRARQLLASMLDESAYRAIGAGAQEIEDVMRRSRSAVAQRDWSQAAELSARADALRQRS
Ga0070691_1044336323300005341Corn, Switchgrass And Miscanthus RhizosphereMATDTNTTKTVGLLVEASKLDTVYRDLYLKQARQLLSAILDESAYRAIGSAESQIEDLLRRSRSAALQRDWGQAAELSAQAD
Ga0070675_10191310223300005354Miscanthus RhizosphereMATDTNTTKTVGLLVEASKLDTVYRDLYLKRARQLLSAILDESAYRAIGSAEKEIEDLMRRSRSAVLQRDWGQAAELSAKADGLRQRKAAMGKLAD
Ga0070706_10156612723300005467Corn, Switchgrass And Miscanthus RhizosphereMAKDANATNVVGLLIEVANTDTVYRDLYLRRARQLLSATLGESAYRAIASIDKEMEDLMRRSRSAALQRNWDQAAQLSAQAEGLRQRKVAMG
Ga0066905_10168570323300005713Tropical Forest SoilMAKDANTTKAVGLLIEASNADTVYRDVYLRRARQLLSANLDESAYRAIGSTDKEIEDLMRRSRSAVLQRDWDQAAKLSAQADGLRQRKTAMGKLAAIG
Ga0081455_1027287623300005937Tabebuia Heterophylla RhizosphereMAKDKNATKVVGLLVEVANADTVYRDLYLRRARQLLSATLDESAYRAIGSGEKEIEDLMRRSRSAVLQRDWAQAAQLSAQADGLRQQKASMGNLAAI
Ga0075428_10001947213300006844Populus RhizosphereKEADVTKVVGLLVSVANVDTVHRDIHLRRTRQLLNATLDESAYRSIGSTEKEIEELTSRSRTAVLQRNWAQAAELSGQIG*
Ga0075420_10050862323300006853Populus RhizosphereMAKEADVTKVVGLLVSVANVDTVHRDIHLRRTRQLLNATLDESAYRSIGSTEKEIEELTSRSRTAVLQRNWAQAAELSGQIG*
Ga0075425_10123019513300006854Populus RhizosphereMAKDTNATKAVGLLIEAANADTVYRDLYLRRARLLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQAAKLSAQAESLRQRKAAMGQLAAIGKDVYDA
Ga0075435_10033758213300007076Populus RhizosphereMTKVVGLLIEAANTDTVYRDIHLRRARQLLSSTLDESAYRSLGSTEHDVEELTSRSRTAVLHRNWAEAAELAGQIDSLRQRLTKTGTLAKLGKEVYEADAVAFEPFSPGKH
Ga0099791_1039990513300007255Vadose Zone SoilMATDTNTTKMVGLLVEASKLDTVYRDLYLRRARQLLSATLDESAYRAIGSAENEIEDLVRRSRSAVLQRDWGQAGELSAKADGLRQRKAAMGKLADI
Ga0105095_1083332213300009053Freshwater SedimentMSKDANTIKIANLFVEVAKLDTVYRDVHLRRARQLLSSTLDESAYRAIGSTEKEIDDLMRRSRTAVMHRDWTQAAELSAQIESLRQRQAKMGSLANIGKEIYEADTV
Ga0115026_1136155823300009111WetlandMAKDANTIKIVGLLVEVAKLDTVYRDVHLRRARQSLSSTLDESAYRAIGSTEKEIDDLMRRSRTAVLHRDWAHAAELSG
Ga0114129_1296065013300009147Populus RhizosphereLMAKEADVTKVVGLLVSVANVDTVHRDIHLRRTRQLLNATLDESAYRSIGSTEKEIEELTSRSRTAVLQRNWAQAAELSGQIG*
Ga0105092_1063238523300009157Freshwater SedimentMAKDANATKTVGLLIEAANADTVFRDIYLRRARQLLSATLDESAYRAIGSLDKEIEDLMRRSRSAVVQRDWDQ
Ga0075423_1064180623300009162Populus RhizosphereMAKDTNMTKVVGLLIEAANTDTVYRDIHLRRARQLLSSTLDESAYRSLGSTEHDVEELTSRSRTAVLHRNWAEAAELAGQIDSLRQRLT
Ga0105100_1105313913300009166Freshwater SedimentMAKDPNTIKIVGLLVEVAKLDTVYRDLHLRRARQLLSSTFDETAYRAIGSTEKEIDDLTRRSRTAVLHREWAQAAELSARVESLRQWLATTRSLAGLGKEVY
Ga0105249_1225370413300009553Switchgrass RhizosphereMATDTNTTKTVGLLVEASKLDTVYRDLYLKRARQLLSATLDESAYRAMGSAEKEIEDLMRRSRSAVLQRDWGQAAELSAKADGLRQRKAAMGKLADIGKELYEADTVVFDP
Ga0105056_103754313300009801Groundwater SandMAKDTNATKAVGLLIEASNADTVYRDLYLRRARQLLSATLDESAYRAIGSTGKEIEDLMRRSRSAVLQRDWDQAANLSG
Ga0105078_103295513300009823Groundwater SandMAKDTNATKAVGLLIEAANADTVYRDLYLRRARQLLSATLDESAYRAIGSTGKEIEDLMRRSRSAVLQRDWDQAANLSAQAESLRQRKAAMGQLAAIGKDVYDADTVAFDP
Ga0126380_1027100323300010043Tropical Forest SoilMAKDANTIKMVGLLVDVAKLDSVYRDIHLRRAGQLLSSTLDESAYRAIGSTEKEIEDVMRRSRSAVVQRDWSQAAELSARADGLRQRVGTMGKLA
Ga0126384_1179321413300010046Tropical Forest SoilMAKDKNATKVVGLLVEAANADTVYRDLYLRRARQLLSATLDESAYRAIGTGEKEIEDLMRRSRSAVLQRDWAQAAQLSAQADGLRQ
Ga0126382_1069829913300010047Tropical Forest SoilMAKDANATKVVSLLVEVANADTVYRDLYLSRGRQLLSAVLDESAYRAIGSSEKDIEDLMRRSRAAVLQRNWDQAAQLAAQAEGLRQQKSAKGNMAAIGKDVYDAEL
Ga0126370_1091401113300010358Tropical Forest SoilMAKDKNATKVVGLLIEVANADTVYRDLYLRRARQLLSATFDESAYKAIGSTEKDIEDLMRRSRSAVLQRDWAQAAQLSAQADGLRQRKASMGNLA
Ga0126376_1296867913300010359Tropical Forest SoilMAKDPNAMKIVSLLIEVANADTVYRDLYLRRARQLLSAIFDESAYRAVASTEKEIDDLMRRSRSAVLQRKWDQAAQLSAQVEGLRQRKAA
Ga0126372_1120563813300010360Tropical Forest SoilMAKDANATKVVSFLVEVANVDTVYRDLYLSRARQLLSAVLHESAYRAIGSSEKDIEDLMRRSRAAVLQRNWDQAAQLAAQAEGLRQQKSAKG
Ga0126377_1079063913300010362Tropical Forest SoilMAKDANATKVVSLLVEVANADTVYRDLYLSRGRQLLSAVLDESAYRAIGSSEKDIEDLMRRSRAAVLQRNWDQAAQLAAQAEGRRQQKSAKGNMAAIG
Ga0137354_108025123300012143SoilMSKDANTLKIVGLLVDVAKLDTVYRDLHLKRARELLSATLDEASYRALGSIATEIDDLTRRSRTAVLHREWQQAAELSARIESQ
Ga0137342_102717623300012171SoilMAKDANTQKIVGRLVETANLDTVYRDVHLRRARQLLSSTLDESSYRAIGSSEKEIDDLMRRSRTATLHRDWAQAAELSGRIDDLRQRMAKMRSLAAIGKEVYDADTIAFEPFSPG
Ga0137365_1071326223300012201Vadose Zone SoilMAKDKNATNVVGLLVEVANADTVYRDLYLGRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQAANLSAQAESLRQRKAAMGQLAAIGKDV
Ga0137380_1104933113300012206Vadose Zone SoilMAKDKNATNVVGLLVEVANADTVYRDLYLGRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQATNLSAQAESLRQRKA
Ga0137367_1066546923300012353Vadose Zone SoilMAKDKNATNVVGLLVEVANADTVYRDLYLGRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQ
Ga0137369_1112827913300012355Vadose Zone SoilVAKDTNATKAVGLLIEVANADTVYRDLYLRRARQMLSATLDEPAYRAIGSTEKEIEDLMRRSAALQRNWDQAAQLSAQAKGLRR*
Ga0137360_1076166533300012361Vadose Zone SoilMAKDTNATKAVGLLIEASNADTVYRDLYLRRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQAANLS
Ga0157333_102937813300012484SoilMATDTNTTKIVGLLVEASKLDTVYRDLYLKRARQLLSATLDESAYRAIGSAEKEVEDLMQRSRSAVVQRDWGQAVELSAKADGLRQ
Ga0157352_103008523300012519Unplanted SoilMATDTNTTKIVGLLVEASKLDTVYRDLYLKRARQLLSATLDESAYRAIGSSEQEIEDLVRRSRSAALQRDWGQAAELSAKADGLRQRNAAMGKLADIG
Ga0137397_1100922623300012685Vadose Zone SoilMAKDANATNVVGLLIEVANTDTVYRDLYLRRARQLLSATLDESAYRAIALIGKEMEDLMRRSRSAALQRNWDQAAQLSAQAEGLHQRKATM
Ga0137410_1179455523300012944Vadose Zone SoilMAKDKNATNVVGLLVEVANGDTVYRDLYLRRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWSQAAELSARADGL
Ga0126375_1043753023300012948Tropical Forest SoilMAKDKNATKVVGLLIEVANADTVYRDLYLRRARQLLSATFDESAYKAIGSTEKDIEDLMRRSRSPVLQRDWAQAAQLSAEADGLRQRKSSMGNLA
Ga0126375_1118006313300012948Tropical Forest SoilMAKDANATKVVSFLVEVANVDTVYRDLYLSRARQLLSAVLHESAYRAIGSSEKDIEDLMRRSRAAVLQRNWDQAAQLAAQAEGLRQQKSAKGNMAAIGKDVYDAELV
Ga0075312_110080713300014254Natural And Restored WetlandsMSKDPNTIKIVNLLVEVAKLDAVHRDVHLRRARQLLSATLDESAYRAIGSTEKEIQDLMSRSRSAVLQRNWAQAAELSGQIDSMRQRLAKMGKLANIGKEVYDAETVVF
Ga0180090_108388013300014866SoilMAKDTNATKAVGLLIEASNTDTVYRDLYLRRARQLLSAILDESAYRAIGSTEKEIEDLMRRSRSAVVQRDWDQAAQLSAQAEGLRQRKEAMG
Ga0180087_110354623300014872SoilMAKDTNATKAVGLLIEASNTDTVYRDLYLRRARQLLSAVLDESAYRAIGSTEKEIEDLMRRSRSAVVQRDWDQAAQLS
Ga0180063_115691313300014885SoilMAKDANTIKIVNLLVEVANVDTVYRDVHLRRARQLLSSTLDESAYRAIGSTEKEIDDLMRRSRTAVVHRDWTQAAELSGRVEALRRRQASM
Ga0180063_122723213300014885SoilMAKDANALKMVNLLVEAAKVDTVYRDVYLRRARNLLGAMLDEFAYRAIGSTEKEIDELMRRSRAAVVQRDWGQAAEVSAQADRLRQRNAAMGSLAAIGKEVY
Ga0137409_1009765133300015245Vadose Zone SoilMAKDKNATNVVGLLVEVANGDTVYRDLYLRRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWSQAAELSARSSSGGRNPAPPSGIH*
Ga0180089_106155913300015254SoilMAKDANTQKIVGRLVETANLDTVYRDVHLRRARQLLSSTLDESSYRAIGSSEKEIDDLMRRSRTATLHRDWAQAAELSGRIDDLRQRMAKMRSLAAIGKEVYDADTIAFEPF
Ga0180077_105864223300015255SoilMAKDANAMKAVGLLIEASNTDTVYRDLYLRRARQLLSAILDESAYRAIGSSEKEIEDLMRRGRSAVVQRDWGQAAELS
Ga0137403_1083289713300015264Vadose Zone SoilMSKDANTTKVVDLLVQVAKLDAVYRDVHLQRARQLLSTTFDESAYRAIGSAAKEIDELIARSRSAVLQRDWGKAADLSAQVDGLRQRTATMRKLAGIGKDVYDA
Ga0132258_1242445113300015371Arabidopsis RhizosphereMATDTNTTKTVGLLVEASKLDTVYRDLYLKRARQLLSAILDESAYRAIGSAENEIEDLMRRSRSAVLQRDWGQVAELSAKADGLRQRKAAMGKLADVGKELYEGDTVV
Ga0132256_10029624423300015372Arabidopsis RhizosphereMATDTNTTKTVGLLVEASKLDTVYRDLYLKRARQLLSATLDESAYRAIGSAEKEVEDLMQRSRSAVVQRDWGQAVELSAKADGLRQRKAAMRNQVDIGKDVYEADTVAFD
Ga0182037_1016372633300016404SoilMAKDANTIKVAGLLVEIAKRDTVYRDVYLRRARELLSATLDESAYRAIGSTAKEIEDLMRLSRTAVLHRDWGKAAELSAKVDSLRERQSSMGNLAAI
Ga0184611_130084213300018067Groundwater SedimentMATDTNTTKTVGLLVEASKLDTVYRDLYLKRARQSLSAIMDESAYRAMGSAENEIEDLVRRSRSAALQRDWGQAAELSAKADGLRQRKAAMGKL
Ga0184635_1014902613300018072Groundwater SedimentMATDTNTTKTVGLLVEASKLDTVYRDLYLKRARQSLSAIMDESAYRAMGSAENEIEDLVRRSRSAVLQRDWGQAAEVSAKADGLRQRKAAMGKLADIGKELYE
Ga0184609_1023963923300018076Groundwater SedimentMAMDTNTTKTVGLLVEASKVDTVYRDLYLRRARQLLSVTLDEAAYRAIGSSEKEIEDLMRRSRSAVLQRDWGQAAELSAKADGLRQRKTAMRN
Ga0184625_1014989313300018081Groundwater SedimentMAKDKNATNVVGLLIEASNADTVYRDLYLRRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQATNLSAQAESLRQRKAAMGQLAAIGKDVYDADTVAF
Ga0184625_1019285213300018081Groundwater SedimentMAKDTNATKAVGLLIEAANADTVYRDLYLRRARHFLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQAANL
Ga0184629_1010394723300018084Groundwater SedimentMATDANTLKIVGLLVEVAKLDTVYRDVHLRRAREFLSSTLDETAYRAIGSTGKEIDDLVRRSRTAVLHREWTQAAELSARIESLRQWVAKMGSLTVMG
Ga0184629_1064381923300018084Groundwater SedimentMAKDANTLKIVGLLVEAAKLDTVYRDVHLQRAREFLSSTLDESAYRAIGSTGKDIDDLVRRSRTAVLHREWTQAAELSARIESLRQWVAKMGSLTVMG
Ga0190264_1049197323300019377SoilMAMATNTTKTVGLLVEASKLDTVYRDLYLKRARQLLSAILDESAYRAIGSSEKEIEDLMRRSRSAVLQREWGQAAELSAKVDGLRQRKKAMGSLADIG
Ga0190264_1217486713300019377SoilMAMAINTTKTVGLLVEASKLDTVYRDLYLRRARQLLSAILDESAYRAIGSAEKEVEDLMRRSRSAVLQRDWGQAGELSAKADGLRQRKAAMGKLADVGKE
Ga0210401_1066814913300020583SoilMAKDANATNVVGLLIEVANTDTVYRDLYLRRARQLLSATLDESAYRAIASIDKEIEDLMRRSRSAALQRNWDQAAKLSAEVEALRQRKAAAGNMAAIGKEVYDVDTIAFDPF
Ga0126371_1185832223300021560Tropical Forest SoilMAKDPNAMKIVGLLIEVANADTVYRDLYLSRARQLLSAIFDESAYRAVASTEKEIDDLMRRSRSAVLQRKWDQAAQL
Ga0224452_119550713300022534Groundwater SedimentMAKDTNATKAVGLLIEAANGDTVYRDLYLRRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQATNLSAQAESLRQRKAAMG
Ga0209431_1051285113300025313SoilMAQDAIALKIVGLLVEIAKTDTVYRDVYLRRARQLLKSTLDESAYRAIGSTEKEIDDLMRGNRTAVLSRDWAKAAELSGRIDVLRQRVATMGNLAAIGKEVYEADAVA
Ga0210076_114823923300025567Natural And Restored WetlandsMAKDANAIKIAGLLVEVAKVDTVYRDVHLRRARQLLSSTLDESAYRAIGSTEKEIDDLIRRSRTATLHRDWAQAAELSGR
Ga0207650_1036831123300025925Switchgrass RhizosphereMAKDPNTIKTVGLLVEVAKGDTVYRDIHLRRARQLLSSTFDEANYRAVGSSEKEIEDLTSRSRTAVLHREWAQAAEISARIEASCCRR
Ga0207686_1107931613300025934Miscanthus RhizosphereMATDTNTTKTVGLLVEASKLDTVYRDLYLGRARQLLSVTLDESAYRAIGSAEKEVEDLMQRSRSAVVQRDWGQAVELSAKADGLRQRKAAMRNQVDIGKDVYEADT
Ga0208289_101042413300026052Natural And Restored WetlandsMSKDPNTIKIVNLLVEVAKLDAVHRDVHLRRARQLLSATLDESAYRAIGSTEKEIQDLMSRSRSAVLQRNWAQAAELSGQIDSMRQRLAKMGKLANIGKE
Ga0209470_114109723300026324SoilMAEDKNATQVVGLLVEVANADTVYRDLYLRRARQLLGATLDESAYRAIASIDKEIEDLMRHSRSVALQRNWDQAAKLSAEVEGLRR
Ga0209970_102845223300027614Arabidopsis Thaliana RhizosphereMAQDANTIKAVNLLVEVAKLDTVYRDLHLRRARQLLSSTLDEASYRAIGSTEKEIEDLTCRSRTAVLHRDWAQAADLSGQIDGMRQRLTKMGKLADIGKEVYEA
Ga0209974_1000634953300027876Arabidopsis Thaliana RhizosphereMAQDANTIKAVNLLVEVAKLDTVYRDLHLRRARELLSSTLDEASYRAIGSTEKEIEDLTCRSRTAVLHRDWAQAADLSGQIDGMRQRLTKMGKLADIGKEVYEADVI
Ga0209974_1007334733300027876Arabidopsis Thaliana RhizosphereMAQDANTIKIVNLLVDVAKLDTVYRDLHLRRARELLSSTLDEASYRSIGSTEKEIEDLTCRSRTAVLHRDWAQAAELSGQIDGMRQRLTKMGKLADIGKEVYDADMVAF
Ga0209382_1045237133300027909Populus RhizosphereMAQDTNAAKAVGLAMEAANADTVYRDFYLRRARQLLSPTLDESAYRSIGSTQTEIEEVLRRSRTAALQRDWAQAAELSGRIDSMRQRLAKTGKLAAIGKEV
Ga0209382_1046257213300027909Populus RhizosphereMAKDKNATNVVGLLVEVANGDTVYRDLYLRRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQAAKLSAQAESLRQRKAAMGQLAAI
Ga0209382_1085621413300027909Populus RhizosphereMAKDTNATKAVGLLIEAANADTVYRDLYLRRARLLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQAAKLSAQAESLRQRKAAMGQ
Ga0299907_1033685323300030006SoilMAMATNTTKTVGLLVEASKLDTVYRDLYLRRARQLLSVTLDESAYRAMGSSEKEIEDLMRRSRSAVLQRDWGQAAELSAKADGLRQRKAAMRNMADIGKDVYEGDTVAFDPF
Ga0307500_1006196923300031198SoilMATDTNTTKIVGLLVEASKLDTVYRDLYLKRARQLLSATLDESAYRAIGSSEQEIEDLVRRSRSAALQRDWGQAAELSAKADGLRQRKAAMSKLS
Ga0307496_1006232123300031200SoilMATDTNTTKTVGLLIEASKLDTVYRDLYLKRARQSLSAIMDESAYRAMGSAENEIEDLMRRSRSAVLQRDWGQVAELSAKADGLRQRKAAM
Ga0170820_1720260613300031446Forest SoilMAEDTNATKAVGLLIEVANADTVYRDLYLRRARQLLSPTLDESAYRAIGSSEKEIEDLMRRSRSAVLQRDWDQAANLSAQAESLRQQKASMGQLAAIGKDV
Ga0310886_1089248723300031562SoilMVKDANATKAVGFLIEAANADTVYRDLYLRRARQLLSATLDETAYRAIGSSEKEIEDLMRCSRSAVLQRYWDQAAQLSAQAEGLRQQKAAMASLASIGKDVYDADTVAFD
Ga0307473_1083051423300031820Hardwood Forest SoilMAKDANATKVVGLLIEVANTDTVYRDLYLRRARQLLSATLDESAYRAIASIDKEMEDLMRRSRSAALQRNWDQAAQLSAQAEGLRQRKAAMGNMAAIGKAVYDADTVAFDP
Ga0306922_1047454313300032001SoilMAKDANTIKVAGLLVEIAKRDTVYRDVYLRRARELLSATLDESAYRAIGSTAKEIEDLMRLSRTAVLHRDWGKAAELSAKVDSLRERQSSMGNLAAIGKEVYEADAVAFE
Ga0307470_1057840013300032174Hardwood Forest SoilMAEDTNATKAVGLLIEVANADTVYRDLYLRRARQLLSPILDESTYRAIGSSDKEIEDLMRRSRSAVLQRDWDQAANLSAQAESLRQQKASMGQLAAIGKDVYDAD
Ga0307470_1068942123300032174Hardwood Forest SoilMAKDTNATKAVGLLIEAANGDTVYRDLYLRRARQLLSATLDESGYRAIGSSDKEIADLMRRSRSAVLQRDWDQAAKLSAQADGLRQRKAAMGDMA
Ga0307472_10007343413300032205Hardwood Forest SoilMAKDTNATKAVDLLIEASNADTVYRDLYLRRARQLLSPTLDETAYRAIGSSEKEIEDLMRRSRSAVLQRDWDQAANLSAQAES
Ga0316620_1105041523300033480SoilMSKDANTIKIVGLLVEVAKLDAVYRDVHLRRARQLLRSTLDESAYRAIGSTEKEIDDLVGRGRTAVLQRDWGQVAELSAQT
Ga0316624_1102291113300033486SoilMSKDANTIKTVGLLVEAAKLDTVYRDVHLRRARQLLSSTLDESAYRAIGTTEKEIDDHVRRSRTAVLHRDWAQAAELSARIEDLRQRQAKMGKLASIGKEVYEAEAVAFE
Ga0316628_10043585413300033513SoilMEKDTNALKAVQLLVEASKTDTVYRDVYLRRARQLLSPTLDEFAYRAIGSTEKEIDDLMRGSRTAVLHRDWGQAAELSGRIDSLRQ
Ga0326723_0271526_2_2833300034090Peat SoilMAKEPNATKAVGLLIEVANADTVYRDLYLRRARQMLSATLDESAYRAIGSMDKEIEDLMRRSRSAVVQRDWDQAAKLSAQADGLRQQKAATGQL
Ga0326723_0504395_256_5553300034090Peat SoilMAKDANTLKMVGLLVEVANSDTVYRDIHLRRARELLSSTFDEAIYRATGSTEKEIDDLTSRSRTAVLHREWAQAAELSARVESLRQRLATTRNLVVMGKD
Ga0364925_0313984_249_5873300034147SedimentMAKDANTLKIVGLLVEAAKLDTVYRDIHLRRAREFLSSTLDETAYRSIGSTGKEIDDLVRSSRTAVLHREWQQAAELSARIESQRQWLAKMRNLAVMGKDVYDADAVVFEPFS
Ga0364943_0185213_479_7603300034354SedimentMAKNENIIKIVNLLVEVAKVDTVYRDVHLRRARELLKSTLDESSYRAIGSTEKEIDDLMRRSRTAALRRDWGQAAELAERAEVLRQRLVSTSEL
Ga0364943_0440846_3_2303300034354SedimentMAKDKNATNVVGLLVEVANADTVYRDLYLRRARQLLSATLDESAYRAIGSTEKEIEDLMRRSRSAVLQRDWDQAAN

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.