Metagenome Family F083446

Basic Information
Family ID	F083446
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	54 residues
Representative Sequence	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYP
Number of Associated Samples	90
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.12 %
% of genes near scaffold ends (potentially truncated)	97.35 %
% of genes from short scaffolds (< 2000 bps)	93.81 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (67.257 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.664 % of family members)
Environment Ontology (ENVO)	Unclassified (41.593 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.407 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 35.71% β-sheet: 0.00% Coil/Unstructured: 64.29%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF03401	TctC	3.54
PF00589	Phage_integrase	2.65
PF00596	Aldolase_II	1.77
PF04392	ABC_sub_bind	1.77
PF03734	YkuD	1.77
PF13362	Toprim_3	0.88
PF07813	LTXXQ	0.88
PF10009	DUF2252	0.88
PF14067	LssY_C	0.88
PF08734	GYD	0.88
PF13546	DDE_5	0.88
PF12686	DUF3800	0.88
PF00732	GMC_oxred_N	0.88
PF00656	Peptidase_C14	0.88
PF00768	Peptidase_S11	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.54
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.54
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.77
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.77
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.77
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.88
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.88
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.88
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
All Organisms	root	All Organisms	32.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
cellular organisms	root	All Organisms → cellular organisms	32.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.19 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.19 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.77 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.19 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.77 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.19 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.88 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.19 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.88 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.19 %
Rhizobium sp. 57MFTsu3.2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 57MFTsu3.2	0.88 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01EOXT8	Not Available	540	Open in IMG/M
3300000956\|JGI10216J12902_100549129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	722	Open in IMG/M
3300005163\|Ga0066823_10097440	Not Available	599	Open in IMG/M
3300005332\|Ga0066388_103258882	Not Available	829	Open in IMG/M
3300005332\|Ga0066388_103842213	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005332\|Ga0066388_107759519	Not Available	537	Open in IMG/M
3300005439\|Ga0070711_101617916	Not Available	566	Open in IMG/M
3300005445\|Ga0070708_101629044	Not Available	600	Open in IMG/M
3300005468\|Ga0070707_100850323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300005544\|Ga0070686_100371644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1080	Open in IMG/M
3300005556\|Ga0066707_10615177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	692	Open in IMG/M
3300005713\|Ga0066905_101074383	Not Available	713	Open in IMG/M
3300005713\|Ga0066905_101924469	Not Available	547	Open in IMG/M
3300005719\|Ga0068861_102290750	Not Available	542	Open in IMG/M
3300005764\|Ga0066903_100774018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1710	Open in IMG/M
3300005764\|Ga0066903_101417156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1306	Open in IMG/M
3300005764\|Ga0066903_102587479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	983	Open in IMG/M
3300005764\|Ga0066903_104387551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 57MFTsu3.2	753	Open in IMG/M
3300005764\|Ga0066903_104680588	Not Available	728	Open in IMG/M
3300005764\|Ga0066903_105461728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300005764\|Ga0066903_106922742	Not Available	588	Open in IMG/M
3300005937\|Ga0081455_10004915	All Organisms → cellular organisms → Bacteria → Proteobacteria	14806	Open in IMG/M
3300006028\|Ga0070717_11398643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300006028\|Ga0070717_11838761	Not Available	547	Open in IMG/M
3300009012\|Ga0066710_104000789	Not Available	551	Open in IMG/M
3300009094\|Ga0111539_11658459	Not Available	741	Open in IMG/M
3300009101\|Ga0105247_11427858	Not Available	561	Open in IMG/M
3300010046\|Ga0126384_11040516	Not Available	747	Open in IMG/M
3300010360\|Ga0126372_12232268	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300010361\|Ga0126378_10141762	Not Available	2436	Open in IMG/M
3300010362\|Ga0126377_10918148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	939	Open in IMG/M
3300010362\|Ga0126377_12269137	Not Available	619	Open in IMG/M
3300010366\|Ga0126379_11116834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	894	Open in IMG/M
3300010398\|Ga0126383_13555042	Not Available	509	Open in IMG/M
3300010863\|Ga0124850_1038235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1529	Open in IMG/M
3300010868\|Ga0124844_1264609	Not Available	597	Open in IMG/M
3300012189\|Ga0137388_10284879	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300012200\|Ga0137382_10101000	All Organisms → cellular organisms → Bacteria → Proteobacteria	1903	Open in IMG/M
3300012469\|Ga0150984_119548347	Not Available	641	Open in IMG/M
3300012955\|Ga0164298_11581177	Not Available	515	Open in IMG/M
3300012957\|Ga0164303_11114764	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300012960\|Ga0164301_10556884	Not Available	838	Open in IMG/M
3300012961\|Ga0164302_11083427	Not Available	631	Open in IMG/M
3300012971\|Ga0126369_10417226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1384	Open in IMG/M
3300012971\|Ga0126369_12684691	Not Available	582	Open in IMG/M
3300015372\|Ga0132256_100112906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2667	Open in IMG/M
3300015373\|Ga0132257_103891807	Not Available	543	Open in IMG/M
3300015373\|Ga0132257_104279490	Not Available	519	Open in IMG/M
3300016319\|Ga0182033_11336517	Not Available	644	Open in IMG/M
3300016341\|Ga0182035_10977968	Not Available	749	Open in IMG/M
3300016357\|Ga0182032_10684179	Not Available	860	Open in IMG/M
3300016357\|Ga0182032_10827010	Not Available	784	Open in IMG/M
3300016371\|Ga0182034_10197880	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300016371\|Ga0182034_11396301	Not Available	612	Open in IMG/M
3300016387\|Ga0182040_10841680	Not Available	758	Open in IMG/M
3300016404\|Ga0182037_11661604	Not Available	569	Open in IMG/M
3300016422\|Ga0182039_10575617	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300018058\|Ga0187766_11346223	Not Available	522	Open in IMG/M
3300018431\|Ga0066655_10945891	Not Available	592	Open in IMG/M
3300018468\|Ga0066662_10761544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	934	Open in IMG/M
3300018468\|Ga0066662_12618477	Not Available	533	Open in IMG/M
3300018482\|Ga0066669_11287933	Not Available	661	Open in IMG/M
3300020580\|Ga0210403_11476291	Not Available	512	Open in IMG/M
3300021168\|Ga0210406_11173882	Not Available	560	Open in IMG/M
3300021361\|Ga0213872_10350050	Not Available	606	Open in IMG/M
3300021432\|Ga0210384_11498673	Not Available	580	Open in IMG/M
3300021560\|Ga0126371_11966915	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300025915\|Ga0207693_10061623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2938	Open in IMG/M
3300025916\|Ga0207663_10536494	Not Available	913	Open in IMG/M
3300025928\|Ga0207700_11921277	Not Available	518	Open in IMG/M
3300025939\|Ga0207665_10714340	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300026301\|Ga0209238_1106804	All Organisms → cellular organisms → Bacteria → Proteobacteria	942	Open in IMG/M
3300027748\|Ga0209689_1080153	All Organisms → cellular organisms → Bacteria → Proteobacteria	1731	Open in IMG/M
3300027748\|Ga0209689_1396691	Not Available	528	Open in IMG/M
3300028875\|Ga0307289_10261287	Not Available	712	Open in IMG/M
3300031543\|Ga0318516_10714215	Not Available	569	Open in IMG/M
3300031546\|Ga0318538_10015972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3247	Open in IMG/M
3300031561\|Ga0318528_10462329	Not Available	681	Open in IMG/M
3300031573\|Ga0310915_11116133	Not Available	547	Open in IMG/M
3300031668\|Ga0318542_10363295	Not Available	745	Open in IMG/M
3300031679\|Ga0318561_10649579	Not Available	580	Open in IMG/M
3300031719\|Ga0306917_10584335	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300031724\|Ga0318500_10228031	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300031744\|Ga0306918_10689353	Not Available	799	Open in IMG/M
3300031748\|Ga0318492_10215535	Not Available	986	Open in IMG/M
3300031748\|Ga0318492_10477326	Not Available	660	Open in IMG/M
3300031770\|Ga0318521_10576833	Not Available	679	Open in IMG/M
3300031771\|Ga0318546_10555936	Not Available	806	Open in IMG/M
3300031778\|Ga0318498_10431358	Not Available	584	Open in IMG/M
3300031779\|Ga0318566_10073872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1650	Open in IMG/M
3300031794\|Ga0318503_10241481	Not Available	586	Open in IMG/M
3300031796\|Ga0318576_10293680	Not Available	767	Open in IMG/M
3300031797\|Ga0318550_10621824	Not Available	518	Open in IMG/M
3300031798\|Ga0318523_10508805	Not Available	595	Open in IMG/M
3300031835\|Ga0318517_10310008	Not Available	713	Open in IMG/M
3300031879\|Ga0306919_10354172	Not Available	1121	Open in IMG/M
3300031879\|Ga0306919_10690082	Not Available	786	Open in IMG/M
3300031890\|Ga0306925_10872751	Not Available	927	Open in IMG/M
3300031890\|Ga0306925_10922425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	896	Open in IMG/M
3300031890\|Ga0306925_11430087	Not Available	680	Open in IMG/M
3300031894\|Ga0318522_10400433	Not Available	520	Open in IMG/M
3300031896\|Ga0318551_10921056	Not Available	510	Open in IMG/M
3300031897\|Ga0318520_10181676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1234	Open in IMG/M
3300031941\|Ga0310912_10638173	Not Available	827	Open in IMG/M
3300031954\|Ga0306926_10193431	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M
3300031954\|Ga0306926_11070329	Not Available	955	Open in IMG/M
3300031959\|Ga0318530_10316906	Not Available	645	Open in IMG/M
3300031981\|Ga0318531_10035310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2071	Open in IMG/M
3300032042\|Ga0318545_10262444	Not Available	620	Open in IMG/M
3300032054\|Ga0318570_10288847	Not Available	745	Open in IMG/M
3300032076\|Ga0306924_11270504	Not Available	792	Open in IMG/M
3300032261\|Ga0306920_103077041	Not Available	627	Open in IMG/M
3300032261\|Ga0306920_103853407	Not Available	547	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.04%
Host-Associated	Host-Associated	7.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.04%
Plants	Host-Associated → Plants	7.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.91%
Loam	Environmental → Terrestrial → Soil → Loam	21.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_00290720	2170459010	Grass Soil	MKIVTIVTGLVAMLSIAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTNQKP
JGI10216J12902_1005491292	3300000956	Soil	MKIVTIATAGLVAMLSVAAAATPTAAHPYDRYAGGGRSFF
Ga0066823_100974402	3300005163	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYAGGGRSFFASLFGPSIARGVVSYPTNQK
Ga0066388_1032588822	3300005332	Tropical Forest Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYIRGRSFFGALFGPNIASGVVSYP
Ga0066388_1038422131	3300005332	Tropical Forest Soil	MKIVTVVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFA
Ga0066388_1077595191	3300005332	Tropical Forest Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIA
Ga0070711_1016179161	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKIVTIVTAGGIAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPT
Ga0070708_1016290443	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYIRGRSFFGALFGPSIARG
Ga0070707_1008503234	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYIRGRSFFGALFGPSIA
Ga0070686_1003716442	3300005544	Switchgrass Rhizosphere	MKIVTIVTAGLVALSVAAAATPTAAHPYDQYAGGRSFFASLFGPSIARGV
Ga0066707_106151771	3300005556	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTNQKPGT
Ga0066905_1010743831	3300005713	Tropical Forest Soil	MKIVTIVTAGLVAILSVAAAGTPAAAHPYDRYAGGSRSFFASLFGPSIARGVVSYPTNQK
Ga0066905_1019244691	3300005713	Tropical Forest Soil	MKIVTIVTGLVAMLSIAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVV
Ga0068861_1022907501	3300005719	Switchgrass Rhizosphere	MKIVTIVTAGLVAMLSIAAAATPAAAHPYDRYAGGGRSFFASLFGPSIAR
Ga0066903_1007740183	3300005764	Tropical Forest Soil	MKIVTIVTAGLVAMLSFAAAATPAAAHPYDRYTGGGRSFFASLFGPSIARGVVSYPTNQKPGTIIVSTAQRR
Ga0066903_1014171562	3300005764	Tropical Forest Soil	MKIVTIVTGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTNQKP
Ga0066903_1025874793	3300005764	Tropical Forest Soil	MKIVTIVTAGLVGMLSVGATATPAAAHPYDRYAGGGRSFFASLF
Ga0066903_1043875512	3300005764	Tropical Forest Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGSRSFFASLFGPSIAREVVSYPTN
Ga0066903_1046805881	3300005764	Tropical Forest Soil	MKIVTIVTGLVAMLSVAAAATPAAAHPYDRYAGGGRSFF
Ga0066903_1054617282	3300005764	Tropical Forest Soil	MKIVTIVTAGLVAMLGVAAAATPAAAHPYDQYIRGRSFFGAMFGPNIASGVVSYPTNQKPGTIVV
Ga0066903_1069227422	3300005764	Tropical Forest Soil	MKIVTIVTAGVVAMLSLAAATPAAAHPYDRYAGGGRSFFVSLFGPSIARG
Ga0081455_100049151	3300005937	Tabebuia Heterophylla Rhizosphere	MKIVTVVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIAR
Ga0070717_113986432	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYIRGR
Ga0070717_118387612	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKIVTIVTGGLVALSVATAATPTAAHPYDQYAGGRSFFASLFGPSIARG
Ga0066710_1040007891	3300009012	Grasslands Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYIRGRSFFGALFG
Ga0111539_116584591	3300009094	Populus Rhizosphere	MKIVTIVTAGLVATLSIAAAATPAAAHPYDRYAGG
Ga0105247_114278581	3300009101	Switchgrass Rhizosphere	MKIVTIVTGGLVALSVATAATPTAAHPYDQYAGGRSFFASLFGPSIARGVVSYQTKQ
Ga0126384_110405161	3300010046	Tropical Forest Soil	MKIVTIATAGLVAMLGVAAAATPAAAHPYDRYAGSGRSFFASLFGPSIAGGW*
Ga0126372_122322682	3300010360	Tropical Forest Soil	MKIVTIVTAGLVAMLGVAAAATPAAAHPYDQYIRGRSFFGA
Ga0126378_101417625	3300010361	Tropical Forest Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASL
Ga0126377_109181482	3300010362	Tropical Forest Soil	MKIVTIVTAGLVAMLGVAAAATPAAAHPYDQYIRGRSFFGALFG
Ga0126377_122691371	3300010362	Tropical Forest Soil	MKIVTIVTGLVAMLSIAAAATPAAAHPYDRYAGGGRSFFASLFGP
Ga0126379_111168343	3300010366	Tropical Forest Soil	MKIVTIVTGLVALLSVAAAATSAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTNQKPGT
Ga0126383_135550421	3300010398	Tropical Forest Soil	MKIVTIVTGLVAMLSVAAAATPAAAHPYDRYAGGSRSFFASLFGPSIARGVVSYPTNQKPGTIV
Ga0124850_10382352	3300010863	Tropical Forest Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYP
Ga0124844_12646091	3300010868	Tropical Forest Soil	MKIVTIAAGLVAMLSVAAAATPAAAHPYDQYIRGRSF
Ga0137388_102848792	3300012189	Vadose Zone Soil	MKIVTNLTAGLVAMLSVAAAATPAAAHPYDQYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIVVSTAQRR
Ga0137382_101010001	3300012200	Vadose Zone Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYIRGRSFFGALF
Ga0150984_1195483471	3300012469	Avena Fatua Rhizosphere	MKIVTIVTAGLVAMLSVAAATPAAAHPYDHYAGGGRSFFASLFGPSIARGVVSYPTA*
Ga0164298_115811771	3300012955	Soil	MKIVTIVTAGLVAMLSIAAAATPAAAHPYDRYAGGGRSFFVSLFGPSIARGVVS*
Ga0164303_111147642	3300012957	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDLYAGGGRSFFASLFGPSIARGVVSYPTT
Ga0164301_105568841	3300012960	Soil	MKIVTIVTAGLVAMLSIAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGMVSYPTTQKPGTIIVSTAQ
Ga0164302_110834271	3300012961	Soil	MKIVIIVTAGLVAMLSVAAAATPAAAHPYDQYAGGGRSFFASLFGPSIARGVVSYPTNQKAGTIV
Ga0126369_104172264	3300012971	Tropical Forest Soil	MKIVIIVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTNQK
Ga0126369_126846911	3300012971	Tropical Forest Soil	MKIVTTVTAGLVAMLSVAAVCATPAAAHPYDQYIRGRSFFGALFGPSIASGVISYPTNQ
Ga0132256_1001129061	3300015372	Arabidopsis Rhizosphere	MKIVTIVTGGLVALSVATAATPTAAHPYDQYAGGRSFFASLFGPSI
Ga0132257_1038918071	3300015373	Arabidopsis Rhizosphere	MKIVTIVTGGLVALSVATAATPTAAHPYDQYAGGRSFFATLFGPSIARGVVSYPTKQKPGTIIVSTAQRRLYL
Ga0132257_1042794901	3300015373	Arabidopsis Rhizosphere	MKTVTIVTAGLVAMLSIAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYATNQK
Ga0182033_113365171	3300016319	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIVVST
Ga0182035_109779682	3300016341	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGSRSFFATLFGPSIARGVVSYPTNQKPGTIVVSTAQ
Ga0182032_106841791	3300016357	Soil	MKIVTIVTAGLVAMLSAAATPAAAHPYDRYAGGSRSFFASLFGP
Ga0182032_108270101	3300016357	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYAGGGRS
Ga0182034_101978801	3300016371	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGSRSFFASLFGPSIA
Ga0182034_113963011	3300016371	Soil	MKIVTIVTAGLVAMLFAAAAPAAAHPYDRYAGGGRSFFASLFGTSIARGVVSYPTNQKPGTIIVS
Ga0182040_108416801	3300016387	Soil	MKIVTIVTGFVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGP
Ga0182037_116616041	3300016404	Soil	MKIVTIVTGLVAMLSVAAAATPAAAHPYDRYAGGSRSFFASLFGPSIARGVV
Ga0182039_105756172	3300016422	Soil	MKIVTIVTGFVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIVVSTA
Ga0187766_113462232	3300018058	Tropical Peatland	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGSRSFFASLFGPSIARGVVTY
Ga0066655_109458911	3300018431	Grasslands Soil	MKIVTIVTAGLVAMLSVAAAAAPAAAHPYDRYAGGSRSIFASLFGPSTARGVVSYPTNQKPGTI
Ga0066662_107615441	3300018468	Grasslands Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYIRGRSFFGALFGPSIARGVVSY
Ga0066662_126184771	3300018468	Grasslands Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYIRGRSFFGALFGPSI
Ga0066669_112879331	3300018482	Grasslands Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIIVSTAQRRL
Ga0210403_114762911	3300020580	Soil	MKIVTIVTAGLVTMLSVAAAATPAAAHPYDRYAGGGRSF
Ga0210406_111738822	3300021168	Soil	MKIVTIVTWLVAMLSIAAAATPAAAHPYDRYAGGGRSFFA
Ga0213872_103500502	3300021361	Rhizosphere	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGG
Ga0210384_114986731	3300021432	Soil	MKIVTIVTAGLVTMLSVAAAATPAAAHPYDRYAGGGRSFFASL
Ga0126371_119669152	3300021560	Tropical Forest Soil	MKIVTIVTAGLVAMLGVAAAATPAAAHPYDQYIRGRSFFGAMFGPNIASGVV
Ga0207693_100616236	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKIVTIVTGLVAMLSIATAATPAAAHPYDRYAGGGRSFFASL
Ga0207663_105364942	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKIVTIVTGLVAMLSIAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTN
Ga0207700_119212771	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYIRGRSFFGALFGPSIARGVV
Ga0207665_107143401	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKIVTIVTAGLVTMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTN
Ga0209238_11068041	3300026301	Grasslands Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRS
Ga0209689_10801532	3300027748	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYIQGRSFFGALFGPSIARGVVSYPTNQKPGTIVVST
Ga0209689_13966912	3300027748	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYIRGRSFFGALFGPSIARGVVSYPTNQKPGTIVVST
Ga0307289_102612871	3300028875	Soil	MKTVTIVTGLVAMLSIAAAATPAAAHPYDQYAGGGRSFFASLF
Ga0318516_107142151	3300031543	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGP
Ga0318538_100159724	3300031546	Soil	MKTVTIVAGLVATLSIAAAATPAAAHPYDQYIRGRSFFGALFGPNIASGVVSYATNQK
Ga0318528_104623291	3300031561	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPT
Ga0310915_111161331	3300031573	Soil	MKIVTIVTGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIA
Ga0318542_103632951	3300031668	Soil	MKIIVIVAAGLVAMLSVAAAAMPAAAHPYDRYAGGSRSFFASLFGPSIARGVVSYPTTEKPGT
Ga0318561_106495791	3300031679	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGPSIA
Ga0306917_105843352	3300031719	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGSRSFFATLFGPSIA
Ga0318500_102280312	3300031724	Soil	MKIVTIVTGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTNQKPGT
Ga0306918_106893531	3300031744	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGPSIARGVVSYPTNQ
Ga0318492_102155352	3300031748	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGSRSFFASLFGPSIARG
Ga0318492_104773262	3300031748	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGPSIARGVVSDPTNQKPGT
Ga0318521_105768331	3300031770	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIVVSTAQR
Ga0318546_105559363	3300031771	Soil	MKIVTIVTGFVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTN
Ga0318498_104313581	3300031778	Soil	MKIVTIVTGFVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIIV
Ga0318566_100738721	3300031779	Soil	MKIVTIVTGFVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPS
Ga0318503_102414811	3300031794	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIVVSTA
Ga0318576_102936801	3300031796	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSI
Ga0318550_106218241	3300031797	Soil	MKIVTIVTGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYATNQKPGTI
Ga0318523_105088051	3300031798	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGPSIARGVVSYPTNQK
Ga0318517_103100081	3300031835	Soil	MKIVTIVTGFVAMLSVAAAATPAAAHPYDRYAGGGRSFF
Ga0306919_103541721	3300031879	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGSR
Ga0306919_106900821	3300031879	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIVVSTAQRR
Ga0306925_108727511	3300031890	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGPSIARGVVSYPTNQKPGT
Ga0306925_109224251	3300031890	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDRYAGGS
Ga0306925_114300871	3300031890	Soil	MKIIVIVAAGLVAMLSVAAAAMPAAAHPYDRYAGGSRSFFASLFGPSIARGVVSYPTTQKPG
Ga0318522_104004331	3300031894	Soil	MKTVTIVAGLVATLSIAAAATPAAAHPYDQYIRGRSFFGALFGPNIASGVV
Ga0318551_109210561	3300031896	Soil	MKIVTIVTGLVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIIV
Ga0318520_101816761	3300031897	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDQYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTI
Ga0310912_106381731	3300031941	Soil	MKIVTIVTGFVAMLSVAAAATPAAAHPYDRYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIVVSTAQRR
Ga0306926_101934313	3300031954	Soil	MKIVTIVTAGLVAMLSAAATPAAAHPYDRYAGGSRSFFASLFGPSIARGVV
Ga0306926_110703291	3300031954	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGPSIARGVVSYPTAGFISCSATARR
Ga0318530_103169061	3300031959	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGG
Ga0318531_100353102	3300031981	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGPSIARGVVS
Ga0318545_102624441	3300032042	Soil	MKTVTIVAGLVATLSIAAAATPAAAHPYDQYIRGRSFFGALFGPNIASGVVSYATNQKPGTIVVSTAQRRLY
Ga0318570_102888471	3300032054	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASL
Ga0306924_112705042	3300032076	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIVVSTAQRRL
Ga0306920_1030770411	3300032261	Soil	MKIVTIVTAGLVAMLSVAAAATPAAAHPYDHYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIVVSTAQ
Ga0306920_1038534071	3300032261	Soil	MKIVTNLTAGLVAMLSVAAAATPAAAHPYDQYAGGGRSFFASLFGPSIARGVVSYPTNQKPGTIIVSTA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083446

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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