Metagenome / Metatranscriptome Family F083785

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083785
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	52 residues
Representative Sequence	MSPAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGELFSPGGH
Number of Associated Samples	60
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.96 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	88.39 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (36.607 % of family members)
Environment Ontology (ENVO)	Unclassified (51.786 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.786 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.03% β-sheet: 0.00% Coil/Unstructured: 58.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00923	TAL_FSA	11.61
PF13561	adh_short_C2	2.68
PF03264	Cytochrom_NNT	1.79
PF01609	DDE_Tnp_1	1.79
PF07166	DUF1398	1.79
PF04011	LemA	0.89
PF00072	Response_reg	0.89
PF00294	PfkB	0.89
PF16177	ACAS_N	0.89
PF13474	SnoaL_3	0.89
PF12695	Abhydrolase_5	0.89
PF07992	Pyr_redox_2	0.89
PF08818	DUF1801	0.89
PF08388	GIIM	0.89
PF00005	ABC_tran	0.89
PF01565	FAD_binding_4	0.89
PF10343	Q_salvage	0.89
PF00144	Beta-lactamase	0.89
PF06067	DUF932	0.89
PF10067	DUF2306	0.89
PF00248	Aldo_ket_red	0.89
PF09699	Paired_CXXCH_1	0.89
PF01272	GreA_GreB	0.89
PF03092	BT1	0.89
PF05935	Arylsulfotrans	0.89
PF14534	DUF4440	0.89
PF16859	TetR_C_11	0.89
PF13450	NAD_binding_8	0.89
PF13683	rve_3	0.89
PF07883	Cupin_2	0.89
PF03193	RsgA_GTPase	0.89
PF01266	DAO	0.89
PF10771	DUF2582	0.89
PF01458	SUFBD	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	11.61
COG3005	Tetraheme cytochrome c subunit NapC of nitrate or TMAO reductase	Energy production and conversion [C]	1.79
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.79
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.79
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.79
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.79
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.79
COG5562	Prophage-encoded protein YbcV, DUF1398 family	Mobilome: prophages, transposons [X]	1.79
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.79
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.89
COG1162	Ribosome biogenesis GTPase RsgA	Translation, ribosomal structure and biogenesis [J]	0.89
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.89
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.89
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	0.89
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.89
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.89
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	19.64 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	6.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.36 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.46 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.36 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.57 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.89 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.36 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.57 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.89 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.36 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.89 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.89 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.36 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.89 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.89 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573005\|GZGK9D401BYOU4	Not Available	503	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101153505	Not Available	680	Open in IMG/M
3300004268\|Ga0066398_10193895	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300004633\|Ga0066395_10823403	Not Available	558	Open in IMG/M
3300005332\|Ga0066388_100323958	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300005332\|Ga0066388_100566452	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300005332\|Ga0066388_105273951	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300005332\|Ga0066388_107362401	Not Available	553	Open in IMG/M
3300005363\|Ga0008090_15445603	Not Available	814	Open in IMG/M
3300005445\|Ga0070708_101008900	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300005445\|Ga0070708_101732806	Not Available	580	Open in IMG/M
3300005468\|Ga0070707_100229671	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300005764\|Ga0066903_106767476	All Organisms → cellular organisms → Bacteria → Terrabacteria group	596	Open in IMG/M
3300005764\|Ga0066903_107607456	Not Available	558	Open in IMG/M
3300007076\|Ga0075435_101090879	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300009088\|Ga0099830_10161943	Not Available	1728	Open in IMG/M
3300009792\|Ga0126374_11674058	Not Available	528	Open in IMG/M
3300010046\|Ga0126384_10722813	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300010048\|Ga0126373_10150464	All Organisms → cellular organisms → Bacteria → Acidobacteria	2211	Open in IMG/M
3300010048\|Ga0126373_10188534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	1990	Open in IMG/M
3300010048\|Ga0126373_10291134	All Organisms → cellular organisms → Bacteria → Acidobacteria	1624	Open in IMG/M
3300010048\|Ga0126373_11000939	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300010048\|Ga0126373_11309985	Not Available	790	Open in IMG/M
3300010048\|Ga0126373_12019679	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300010048\|Ga0126373_12521086	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300010162\|Ga0131853_10630277	Not Available	912	Open in IMG/M
3300010358\|Ga0126370_11461999	Not Available	648	Open in IMG/M
3300010359\|Ga0126376_10402109	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300010359\|Ga0126376_12539337	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300010360\|Ga0126372_10342067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1337	Open in IMG/M
3300010360\|Ga0126372_10438531	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1206	Open in IMG/M
3300010361\|Ga0126378_10110546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2731	Open in IMG/M
3300010361\|Ga0126378_11786140	Not Available	699	Open in IMG/M
3300010361\|Ga0126378_12411245	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300010361\|Ga0126378_13103112	Not Available	529	Open in IMG/M
3300010366\|Ga0126379_12525154	Not Available	612	Open in IMG/M
3300010366\|Ga0126379_13870637	Not Available	501	Open in IMG/M
3300010376\|Ga0126381_100611530	Not Available	1551	Open in IMG/M
3300010376\|Ga0126381_101232199	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300010376\|Ga0126381_101247014	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300010376\|Ga0126381_101297132	Not Available	1052	Open in IMG/M
3300010376\|Ga0126381_101472985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300010376\|Ga0126381_105075709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300010398\|Ga0126383_10006411	All Organisms → cellular organisms → Bacteria	8196	Open in IMG/M
3300010398\|Ga0126383_10124884	Not Available	2353	Open in IMG/M
3300010398\|Ga0126383_11064908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300010398\|Ga0126383_11400867	All Organisms → cellular organisms → Bacteria → Terrabacteria group	789	Open in IMG/M
3300010398\|Ga0126383_11535642	Not Available	755	Open in IMG/M
3300010398\|Ga0126383_12499198	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300012923\|Ga0137359_10843946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300012971\|Ga0126369_10255709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1726	Open in IMG/M
3300012971\|Ga0126369_10611589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1161	Open in IMG/M
3300012971\|Ga0126369_12997045	Not Available	553	Open in IMG/M
3300016319\|Ga0182033_10217508	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1531	Open in IMG/M
3300016319\|Ga0182033_10530364	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1015	Open in IMG/M
3300016319\|Ga0182033_11934965	Not Available	536	Open in IMG/M
3300016357\|Ga0182032_10701382	Not Available	850	Open in IMG/M
3300016371\|Ga0182034_10055633	All Organisms → cellular organisms → Bacteria	2638	Open in IMG/M
3300016371\|Ga0182034_10342663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1211	Open in IMG/M
3300016371\|Ga0182034_11342674	Not Available	624	Open in IMG/M
3300016371\|Ga0182034_11803774	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300016387\|Ga0182040_10043301	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300016387\|Ga0182040_11241081	Not Available	628	Open in IMG/M
3300016387\|Ga0182040_11473488	Not Available	578	Open in IMG/M
3300016404\|Ga0182037_10237410	All Organisms → cellular organisms → Bacteria → Acidobacteria	1435	Open in IMG/M
3300016404\|Ga0182037_11608588	Not Available	578	Open in IMG/M
3300016404\|Ga0182037_11651895	Not Available	570	Open in IMG/M
3300016404\|Ga0182037_11926760	Not Available	529	Open in IMG/M
3300016422\|Ga0182039_10889254	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300016445\|Ga0182038_11993961	Not Available	525	Open in IMG/M
3300018089\|Ga0187774_10155719	Not Available	1204	Open in IMG/M
3300020579\|Ga0210407_10594727	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300020583\|Ga0210401_10371218	All Organisms → cellular organisms → Bacteria → Acidobacteria	1292	Open in IMG/M
3300021178\|Ga0210408_10994388	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300021432\|Ga0210384_10146045	Not Available	2122	Open in IMG/M
3300021432\|Ga0210384_10241876	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300021560\|Ga0126371_10346246	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300021560\|Ga0126371_10772069	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300021560\|Ga0126371_11476754	Not Available	809	Open in IMG/M
3300021560\|Ga0126371_11626141	All Organisms → cellular organisms → Bacteria → Terrabacteria group	771	Open in IMG/M
3300021560\|Ga0126371_11776146	Not Available	739	Open in IMG/M
3300021560\|Ga0126371_12079787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300022504\|Ga0242642_1012446	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300026551\|Ga0209648_10315160	All Organisms → cellular organisms → Bacteria → Acidobacteria	1107	Open in IMG/M
3300027527\|Ga0209684_1068707	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300027548\|Ga0209523_1116957	All Organisms → cellular organisms → Bacteria → Terrabacteria group	551	Open in IMG/M
3300031543\|Ga0318516_10747935	Not Available	554	Open in IMG/M
3300031546\|Ga0318538_10082705	All Organisms → cellular organisms → Bacteria → Proteobacteria	1633	Open in IMG/M
3300031753\|Ga0307477_10876937	All Organisms → cellular organisms → Bacteria → Terrabacteria group	593	Open in IMG/M
3300031754\|Ga0307475_10236656	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300031754\|Ga0307475_10897145	Not Available	700	Open in IMG/M
3300031910\|Ga0306923_11990800	Not Available	590	Open in IMG/M
3300031941\|Ga0310912_10313989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1214	Open in IMG/M
3300031945\|Ga0310913_10022482	All Organisms → cellular organisms → Bacteria	3936	Open in IMG/M
3300031945\|Ga0310913_10260324	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1220	Open in IMG/M
3300031946\|Ga0310910_10501591	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	963	Open in IMG/M
3300031946\|Ga0310910_11312342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	559	Open in IMG/M
3300031947\|Ga0310909_10488254	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300031954\|Ga0306926_10258606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2157	Open in IMG/M
3300031954\|Ga0306926_12880570	Not Available	517	Open in IMG/M
3300031981\|Ga0318531_10097610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1292	Open in IMG/M
3300032001\|Ga0306922_10182781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2248	Open in IMG/M
3300032001\|Ga0306922_11788636	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300032042\|Ga0318545_10042769	Not Available	1517	Open in IMG/M
3300032059\|Ga0318533_10697144	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300032180\|Ga0307471_100522813	All Organisms → cellular organisms → Bacteria → Acidobacteria	1337	Open in IMG/M
3300032205\|Ga0307472_100819345	All Organisms → cellular organisms → Bacteria → Acidobacteria	852	Open in IMG/M
3300032261\|Ga0306920_100047732	All Organisms → cellular organisms → Bacteria	6214	Open in IMG/M
3300032261\|Ga0306920_100415631	Not Available	1999	Open in IMG/M
3300033289\|Ga0310914_10133239	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300033289\|Ga0310914_11781754	Not Available	520	Open in IMG/M
3300033290\|Ga0318519_10848322	Not Available	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.21%
Host-Associated	Host-Associated	1.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.21%
Arthropoda	Host-Associated → Arthropoda	0.89%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.21%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.71%
Loam	Environmental → Terrestrial → Soil → Loam	11.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	36.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.04%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573005	Grass soil microbial communities from Rothamsted Park, UK - FG3 (Nitrogen)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG3_10087580	2189573005	Grass Soil	MSRAEEPTKNDSAQVRLLVNRQVEAWEKRDFAIAADDWLPNGELFSSGGHVVKKDMQSAILDY
INPhiseqgaiiFebDRAFT_1011535051	3300000364	Soil	MSRVEEPTKNDSAQVVRSLVNRQVQAWEKRDFATAADDWLPNEEL
Ga0066398_101938952	3300004268	Tropical Forest Soil	MKGMSRAEETTKNDSAQVRALVNRQVQAWEKRDFAIAADDWL
Ga0066395_108234032	3300004633	Tropical Forest Soil	MSRSLDPTENYSTQVRALVNRQVRAWENRDFGIAAEDWLPNGHLFSPGSRVV
Ga0066388_1003239583	3300005332	Tropical Forest Soil	MSRAEAHRNRDSVRVHALVNRQVQAWERCDFAIAADDWLPNGKLFFPGGRVVKKDMQGAILEYFKNFTNLR
Ga0066388_1005664521	3300005332	Tropical Forest Soil	MSRTKKPTSNDSVQARALVNRQVQAWEKHDFAIAAADWLPNGHLSFPGGHVFKKDMQSA
Ga0066388_1052739511	3300005332	Tropical Forest Soil	MSRAEETTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLP
Ga0066388_1073624011	3300005332	Tropical Forest Soil	MSRAEERPKNDSAQIHALVNRQVQAWEKRDFAIAADDWLP
Ga0008090_154456031	3300005363	Tropical Rainforest Soil	MSQAEEPAKNDSVQVRALVNRQVQAWEKRDFAVAADDWLPNGESFSPGGHVVKKDMQSAI
Ga0070708_1010089002	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSRAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGEL
Ga0070708_1017328061	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LSRGEEHTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGELFS
Ga0070707_1002296712	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSRAEEPTPKKDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGE
Ga0066903_1067674761	3300005764	Tropical Forest Soil	MSQAQEPTKNDSAQVRALVNRQMEAWEKRDFAIAADDWLPNGELFSPGGHVVKKD
Ga0066903_1076074562	3300005764	Tropical Forest Soil	MTGVGLLRLMLLEKRQMRRAGRSTKNHSKQVHELVNRQVQAWEKRDFGIAADDWLPGGHLFSPGSRVVKKDMQGAILGYF
Ga0075435_1010908791	3300007076	Populus Rhizosphere	MRPGAKKPTKNDRVQACTLVNRQVQAWEKRDFAIAADDWLPNGELFSP
Ga0099830_101619433	3300009088	Vadose Zone Soil	MSRAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWL
Ga0126374_116740581	3300009792	Tropical Forest Soil	MSRAEQPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPKGE
Ga0126384_107228131	3300010046	Tropical Forest Soil	MSRAEEPTQNDSAEVRALVKRQAQAWEKRDFAIAADDWLPNGELFSPGGHVVKKDIQSAILDY
Ga0126373_101504641	3300010048	Tropical Forest Soil	MSQAEEPTKNDSVQVRALVNRQVQAWVKRDFAIAADDWLPNGESFSPGGHVVKKDMQSAILNYFKD
Ga0126373_101885341	3300010048	Tropical Forest Soil	MSRAEKHAKKDRTQVRALVNRQVEAWEKRDFAIAADDWLPN
Ga0126373_102911342	3300010048	Tropical Forest Soil	MRQPEKSTKNDSARIRALVNRQVQAWEKRDFAIAADDWLPNGELYSPGG
Ga0126373_110009391	3300010048	Tropical Forest Soil	MSRTEQPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWL
Ga0126373_113099853	3300010048	Tropical Forest Soil	MSKAQEPTKNNSVQVRALVNRQVQAWEKRDFAIAADDWLPNG
Ga0126373_120196792	3300010048	Tropical Forest Soil	MRQPEKSSKNDSARIRALVNRQVQAWERRDFAIAADDWLPNGELYSPGGRVV
Ga0126373_125210862	3300010048	Tropical Forest Soil	MGAKKRMRRAKKTTKNDSVQARALVNRQVQAWEKHDFAIAAADWLPNGKLFFPGG
Ga0131853_106302772	3300010162	Termite Gut	MRRAQKPTKNVSAQVRALVNRQAQAWEKRDFAIAADDWLANGKLFYPGGRALKKDMQHAMRDYFKNF
Ga0126370_114619992	3300010358	Tropical Forest Soil	MQRESAKGNEMRRAKKTTKNDSVQVRALVNRQVHAWEKHDFAIAAPDWLPNGKLFFPGG
Ga0126376_104021092	3300010359	Tropical Forest Soil	MKGMSRAEETTKNDSAQVRALVSRQVQAWEKRDFAIAADDWLPN
Ga0126376_125393371	3300010359	Tropical Forest Soil	LPDPHKQPTKNDSAQVRALVNRQVQAWERRDFAIAADDWLPNGKLFSS
Ga0126372_103420671	3300010360	Tropical Forest Soil	LPDPPKQPTKNDYAQICALVNRQVQAWEKHDFAIAADDWLPNGKLFSSGGHVLKK
Ga0126372_104385311	3300010360	Tropical Forest Soil	LPDPPKQPTKNDSAQVCALVSRQVQAWEKRDFAIAADDWLPNGMLFSSGGRVLKKDMQRAILDYFKN
Ga0126378_101105461	3300010361	Tropical Forest Soil	MRRAESTQVHALVNRQVQAWEKRDFAIAANDWLPNGELFSPGGHAVKKDMQSAILDYFK
Ga0126378_117861402	3300010361	Tropical Forest Soil	MRRAEESTKNDSAQVRALVNRQVQAWENRDFAIAADDWLPTGE
Ga0126378_124112452	3300010361	Tropical Forest Soil	MSRAEKLTKNGGAEVCALVNRQVQAWEKRDFAIAADDWLPNGELFSSGGRVLKKDMQ
Ga0126378_131031121	3300010361	Tropical Forest Soil	MEEKKRMSTAKVRTRHHSAQVRALVNRQVQAWEMHDFAIAAADWLPNGKLFFPGGHV
Ga0126379_125251542	3300010366	Tropical Forest Soil	MRQPEKSTKNDSARIRALVNRQVQAWEKRDFAIAADDWLP
Ga0126379_138706371	3300010366	Tropical Forest Soil	MSRAQEPTKNNKAQVRALVNRQVQAWETREFAIAADDWLPNGELFSPGVHVVK
Ga0126381_1006115301	3300010376	Tropical Forest Soil	MSRAEERPKNDSAQIHALVNRQVQAWEKRDFAIAADD
Ga0126381_1012321992	3300010376	Tropical Forest Soil	MSRAEQPTRNHGAQLRALVDRQVQAWDKRDFAIAADDWL
Ga0126381_1012470142	3300010376	Tropical Forest Soil	MSRAEKYTKKDRTQVRALVNRQVEAWEKRDFAIAADDWLPNGELFSPGGHVLKKDMQSA
Ga0126381_1012971323	3300010376	Tropical Forest Soil	MSKAQEPTKNNSVQVRALVNRQVQAWEKRDFAIAADDWLPNGELFS
Ga0126381_1014729851	3300010376	Tropical Forest Soil	MSRAEQPTKNASAQVRALVNRQVQAWEKRDFAIAADDWLPNGELFFPGGHV
Ga0126381_1050757091	3300010376	Tropical Forest Soil	MSRAEQPIKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGELFFPGGHV
Ga0126383_100064111	3300010398	Tropical Forest Soil	MSRAQEPTKNNRAQARALVNRQVQAWETREFAIAADDWLPNGELFSPGVHVVKKDMRSAI
Ga0126383_101248842	3300010398	Tropical Forest Soil	MSQAEEPTKNASVQVRALVNRQVQAWEKRDFAIAADDWLPNGESFSPGGHVVKKDMQSAIHNYFKNFTDL
Ga0126383_110649082	3300010398	Tropical Forest Soil	MSRAEQPTKNASAQVRALVNRQVQAWEKRDFAIAADDWL
Ga0126383_114008671	3300010398	Tropical Forest Soil	MRPAEETTKNDSEVRALVKRQVQAWERRDFALAADDWLPNGELFSPGGHVLKKDMQSAIV
Ga0126383_115356421	3300010398	Tropical Forest Soil	MRQPEKSTKNDSARIRALVNRQVQAWEKRDFAIAADDWLPNGEL
Ga0126383_124991982	3300010398	Tropical Forest Soil	LPDPPKQPTKNDSAQVCALVNRQVQAWEKRDFAIAADDWLPNGELFSPGGHVVKKDIQSAILDYFKNFTDL
Ga0137359_108439462	3300012923	Vadose Zone Soil	MSRAEEPTKNDSAQVRALVNRQVEAWEKRDFAIAADDWLP
Ga0126369_102557093	3300012971	Tropical Forest Soil	MSRERKPTKNVSVLAHALVNRQVQAWEKHHFAIAAADWLPNGHLSFPGGHVFKKDM
Ga0126369_106115891	3300012971	Tropical Forest Soil	MRRAKEPTKNASAQVRALVNRQVQAWEKRDFAIAADDWL
Ga0126369_129970451	3300012971	Tropical Forest Soil	MSRAEQPTRNHGAQLRALVDRQVQAWEKRDFAIAADDWLSNGELFFLGGHV
Ga0182033_102175081	3300016319	Soil	MSRVEAHRNSDSVRVHALVNRQVQAWERRDFAIAADDWLPNGKLFFPGGR
Ga0182033_105303641	3300016319	Soil	MRRTEEPASNDSAQLRALVNRQLLAWEKRDFAIAADDWLPNGELFSPGGHVLKKDMQSA
Ga0182033_119349651	3300016319	Soil	MSQAEEPTKNASVQVRALVNRQVQAWEKRDFAIAADDWLPNGES
Ga0182032_107013822	3300016357	Soil	AEETMSGAGEPTKNDSGQVRALVNRQVQAWEKRDFAVAADDWLPNGELFSQKGHVVKKDM
Ga0182034_100556331	3300016371	Soil	MRRAEEPTKNFSRRHVRRKAQVRALVSHQVQAWEKRDFAIAADDWLPNGE
Ga0182034_103426631	3300016371	Soil	MSRVEAHRNSDSVRVRALVNRQVQAWERRDFAIAADDWLPNGKLF
Ga0182034_113426741	3300016371	Soil	MSRAKKPTSNDSVQARALVNRQVQAWEKHDFAIAAADWLPNGHLFFRGGHVFKKDMQSAMVDYFKNFT
Ga0182034_118037741	3300016371	Soil	MSLPEQPKNDSAHVRALVNRQVQAWEKRDFAIAADDWLPNGEL
Ga0182040_100433012	3300016387	Soil	MRRAKAPTKNDSAKVRALVNRQVQAWEKRDFAVATDDWLPNGELFSPGGHVFKKD
Ga0182040_112410811	3300016387	Soil	MGRAEEPIKNYSWRHVRREAQVRALVNRQLLAWKKRDFAIAADDWLPNGELFSP
Ga0182040_114734881	3300016387	Soil	MSQAEEPTKNDSVQVRALVNRQVQAWEKRDFAIAADDWLPNGESFSPGGHVVKKDMQ
Ga0182037_102374104	3300016404	Soil	MSRAQKPTRNAAAQVRALVNRQAQAWKRRDFAIAADDWLPNG
Ga0182037_116085882	3300016404	Soil	MSQAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGESFSPGGHVVK
Ga0182037_116518951	3300016404	Soil	MSQAEEPTKNASVQVRALVNRQVQAWEKRDFAIAADDWLPNGESFSPGGHVVK
Ga0182037_119267602	3300016404	Soil	MGEKKRMRRAKKPTKNDNVQARALVNRQVQAREKHAFAIAAADWL
Ga0182039_108892541	3300016422	Soil	MSRAEQPTKNDSAQVRALVNRQVQAWEKPDFAIAADDWLPNGELFSRGGHVVKKDMQSAILDYFKNF
Ga0182038_119939611	3300016445	Soil	MSQAEEPTKNASVQVRALVNRQVQAWEKRDFAIAADDWLPNG
Ga0187774_101557191	3300018089	Tropical Peatland	MSRAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLSNGELFSPGGHVVKKDMQSAILDYFKNFKSEGHG
Ga0210407_105947273	3300020579	Soil	MSRAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGELFSPGGHVVKKDMQSAI
Ga0210401_103712181	3300020583	Soil	MSRTAGPTRNDSAQVRSLVNRQVQAWEKRDFAIAADDWLPNGELFSPGSHVVKNDMQG
Ga0210408_109943882	3300021178	Soil	MSPAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPN
Ga0210384_101460451	3300021432	Soil	MSPAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGELFSPGGH
Ga0210384_102418762	3300021432	Soil	MSRVEEPTKNDSAQVRALVNRQVHAWEKCDFAIAAADWLPNGELFSPGGHVVKKDMQSAILDYFKNFT
Ga0126371_103462463	3300021560	Tropical Forest Soil	MSRAEKAIHNDSVQASALVNRQVQAWEKHDFAIAAADWLPNGHMFFPGGHVFKKDMQSAMADY
Ga0126371_107720691	3300021560	Tropical Forest Soil	MSQAEEPTKNDSVQVRALVNRQVQAWEKRDFAIAADDWLPNGESF
Ga0126371_114767541	3300021560	Tropical Forest Soil	MRRAESSQVRALVNRQVQAWEKRDFAIAADDWLPTGELFSPRV
Ga0126371_116261411	3300021560	Tropical Forest Soil	MRQPEKSTKNDSARIRALVNRQVQAWEKRDFAIAADDWLPNGELYSPGGQVVKKDMQSAILDYFKNF
Ga0126371_117761461	3300021560	Tropical Forest Soil	MSRAEKHAKKDRTQVRALVNRQVEAWEKRDFAIAADDWLPNGELFSP
Ga0126371_120797872	3300021560	Tropical Forest Soil	MRRAEESTKNDSAQVRALVNRQVQAWENRDFAIAADDWLPTGELFFPK
Ga0242642_10124461	3300022504	Soil	MSPAEEPTKNDSAQARALVNRQVQAWEKRDFAIAADDWLPNGELFSPGGHVVKKDMQS
Ga0209648_103151603	3300026551	Grasslands Soil	MSRAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGELFSPGGHVVKKDMQSAILDY
Ga0209684_10687071	3300027527	Tropical Forest Soil	LPDPPKQPTKNDCAQVCALVNRQVQAWEKCDFAIAADDWLPNGKLFSSGGRVLKKDMQRA
Ga0209523_11169571	3300027548	Forest Soil	MSQAEEPNKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGELFSPGGHVVKKD
Ga0318516_107479352	3300031543	Soil	MSQAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGESFSPGGHVVKK
Ga0318538_100827054	3300031546	Soil	MSQAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGESFSPGGHVVKKDMQSAIHN
Ga0307477_108769371	3300031753	Hardwood Forest Soil	MSRAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGELFSPGGHVVKKD
Ga0307475_102366562	3300031754	Hardwood Forest Soil	MSRAEQPTKNDSAQVCALVKRQVQAWEKRDFAIAADDWLPNGELFSPGGHVVKK
Ga0307475_108971451	3300031754	Hardwood Forest Soil	MSRAEEPTKNDSAQVHALVNRQVQAWEKRDFATAADDWLPNG
Ga0306923_119908002	3300031910	Soil	MRRTEEPASNDSAQLRALVNRQLLAWEKRDFVIAADDWLPNGELFSPGGHLF
Ga0310912_103139891	3300031941	Soil	MSRVEAHRNSDSVRVRALVNRQVQAWERRDFAIAADDWLPNGKLFFPGGRVVK
Ga0310913_100224821	3300031945	Soil	MRRAEEPTKNFSRRHVRRKAQVRALVSHQVQAWEKRDFAIAADDWLPNGELFSPGGHVFKKD
Ga0310913_102603243	3300031945	Soil	MRRAPKPTKNVSARVRSLVNRQAQAWEKRDFAIAAHDWLPNGELF
Ga0310910_105015911	3300031946	Soil	MGEKKRMRRAKKPTKNDGVQARALVNRQVQAWEKHDFAIAAADWLPNGKLFFPGGHV
Ga0310910_113123422	3300031946	Soil	MSRVEAHRNSDSVRVRALVNRQVQAWERRDFAIAADDWLPNGKLFFPG
Ga0310909_104882541	3300031947	Soil	MSLPEQPKNDSAHVRALVNRQVQAWEKRDFAIAADDWLPNGE
Ga0306926_102586063	3300031954	Soil	MGQTEELTKNDSAQVRALVNRQVQAWEKRDFAIAADD
Ga0306926_128805701	3300031954	Soil	MGRAEEPTKYYSWRHVRREAQVRALVNRQLLAWKKRDFAIAADDWLPNGELFSPGGHV
Ga0318531_100976102	3300031981	Soil	MSQAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAAD
Ga0306922_101827813	3300032001	Soil	MGQTEELTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLP
Ga0306922_117886361	3300032001	Soil	MSLPEQPKNDSAHVRALVNRQVQAWEKRDFAIAADDWLPNGELFSPG
Ga0318545_100427691	3300032042	Soil	MSQAEEPTKNDSVQVRALVNRQVQAWEKRDFAIAADDWLPNGESFSPGGHVVKKDMQSAIHN
Ga0318533_106971442	3300032059	Soil	MSRVEAHRNSDSVRVRALVNRQVQAWERRDFAIAADDWLPNGKLFFPGGRVVKKDMQGAI
Ga0307471_1005228134	3300032180	Hardwood Forest Soil	MSPAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGELFSPGGHVVKKDM
Ga0307472_1008193452	3300032205	Hardwood Forest Soil	MSQAEEPTKSDSAQVRALVNRQVQAWEKRDFAIAADDWLP
Ga0306920_1000477321	3300032261	Soil	MGQTEELTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGESFS
Ga0306920_1004156311	3300032261	Soil	MSQAEEPTKNASVQVRALVNRQVQAWEKRDFAIAADDWLPNGESFSPGGHVVKK
Ga0310914_101332391	3300033289	Soil	MRRAKAPTKNDSAQVRALVNRQAQAWEKRDFAVATDDWLPNGELFSSGGHVLKKDMQSAILDYF
Ga0310914_117817541	3300033289	Soil	MRRAKAPTKNDSAQVRALVNRQVQAWKKRDFAVAADDWLPNGELF
Ga0318519_108483222	3300033290	Soil	MSQAEEPTKNDSAQVRALVNRQVQAWEKRDFAIAADDWLPNGESFSPGGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083785

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences