Metagenome / Metatranscriptome Family F083870

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083870
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	76 residues
Representative Sequence	VAATARETDPVKLKALIDQGIAILDRDQPTIVWSNPVVPMAWWDNVKGHGTATRGINFWEGMRDEIWWLEK
Number of Associated Samples	84
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.00 %
% of genes near scaffold ends (potentially truncated)	86.61 %
% of genes from short scaffolds (< 2000 bps)	94.64 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.071 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.357 % of family members)
Environment Ontology (ENVO)	Unclassified (30.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.750 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.30% β-sheet: 14.14% Coil/Unstructured: 55.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00528	BPD_transp_1	19.64
PF00496	SBP_bac_5	8.04
PF01575	MaoC_dehydratas	0.89
PF00072	Response_reg	0.89
PF16113	ECH_2	0.89
PF13340	DUF4096	0.89
PF13561	adh_short_C2	0.89
PF01137	RTC	0.89
PF12762	DDE_Tnp_IS1595	0.89
PF12760	Zn_Tnp_IS1595	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0430	RNA 3'-terminal phosphate cyclase	RNA processing and modification [A]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.07 %
Unclassified	root	N/A	33.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.07 %
Unclassified	root	N/A	33.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.07 %
Unclassified	root	N/A	33.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.68 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.46 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.79 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.89 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.57 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.79 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.89 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.57 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.79 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.89 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.89 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.89 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.57 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.79 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.89 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.89 %
Ciceribacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter	0.89 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.57 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.79 %
Ciceribacter ferrooxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans	0.89 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.89 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.89 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.89 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2249017	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300000559\|F14TC_101047860	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005167\|Ga0066672_10713929	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005332\|Ga0066388_100783744	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300005332\|Ga0066388_103247886	Not Available	831	Open in IMG/M
3300005332\|Ga0066388_104929782	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005332\|Ga0066388_107268407	Not Available	556	Open in IMG/M
3300005445\|Ga0070708_100397588	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300005445\|Ga0070708_100472074	Not Available	1183	Open in IMG/M
3300005454\|Ga0066687_10996750	Not Available	500	Open in IMG/M
3300005468\|Ga0070707_100207131	All Organisms → cellular organisms → Bacteria → Proteobacteria	1911	Open in IMG/M
3300005536\|Ga0070697_101976706	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005586\|Ga0066691_10735755	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005764\|Ga0066903_102275247	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300005985\|Ga0081539_10004334	All Organisms → cellular organisms → Bacteria	15821	Open in IMG/M
3300006032\|Ga0066696_10436767	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300006844\|Ga0075428_100637880	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300006871\|Ga0075434_101062805	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300007255\|Ga0099791_10539415	Not Available	568	Open in IMG/M
3300007255\|Ga0099791_10634226	Not Available	524	Open in IMG/M
3300009038\|Ga0099829_10136729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1944	Open in IMG/M
3300009090\|Ga0099827_10658500	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300009090\|Ga0099827_11177035	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300009100\|Ga0075418_12594226	Not Available	553	Open in IMG/M
3300009137\|Ga0066709_102606123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	677	Open in IMG/M
3300009143\|Ga0099792_11048836	Not Available	547	Open in IMG/M
3300009162\|Ga0075423_10523504	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300009162\|Ga0075423_11758883	Not Available	668	Open in IMG/M
3300009792\|Ga0126374_10341707	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300010043\|Ga0126380_11655912	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300010046\|Ga0126384_11352417	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300010047\|Ga0126382_10416457	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300010047\|Ga0126382_10591149	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300010047\|Ga0126382_12380013	Not Available	514	Open in IMG/M
3300010048\|Ga0126373_10391358	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300010358\|Ga0126370_10486391	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300010358\|Ga0126370_11624741	Not Available	619	Open in IMG/M
3300010359\|Ga0126376_13244489	Not Available	503	Open in IMG/M
3300010360\|Ga0126372_11265211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	765	Open in IMG/M
3300010360\|Ga0126372_12894189	Not Available	532	Open in IMG/M
3300010360\|Ga0126372_12908586	Not Available	531	Open in IMG/M
3300010361\|Ga0126378_13124963	Not Available	527	Open in IMG/M
3300010366\|Ga0126379_11665543	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300010376\|Ga0126381_103364182	Not Available	630	Open in IMG/M
3300010398\|Ga0126383_10230437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1802	Open in IMG/M
3300010398\|Ga0126383_11134137	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300010398\|Ga0126383_12370531	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300010398\|Ga0126383_12914378	Not Available	559	Open in IMG/M
3300011269\|Ga0137392_10887091	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300011269\|Ga0137392_10916389	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300012189\|Ga0137388_11613705	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300012202\|Ga0137363_11522178	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300012203\|Ga0137399_11327203	Not Available	604	Open in IMG/M
3300012205\|Ga0137362_11124293	Not Available	667	Open in IMG/M
3300012206\|Ga0137380_11054910	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300012206\|Ga0137380_11678785	Not Available	519	Open in IMG/M
3300012207\|Ga0137381_10829087	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	801	Open in IMG/M
3300012209\|Ga0137379_11269554	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300012210\|Ga0137378_10261059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans	1612	Open in IMG/M
3300012211\|Ga0137377_10713488	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300012211\|Ga0137377_11774191	Not Available	537	Open in IMG/M
3300012350\|Ga0137372_10644958	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300012356\|Ga0137371_10577204	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300012356\|Ga0137371_10875107	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300012360\|Ga0137375_10612100	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	905	Open in IMG/M
3300012360\|Ga0137375_11220439	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300012361\|Ga0137360_10696165	Not Available	872	Open in IMG/M
3300012362\|Ga0137361_10213354	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300012918\|Ga0137396_10192552	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300012929\|Ga0137404_10768072	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300012930\|Ga0137407_10138023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2139	Open in IMG/M
3300012944\|Ga0137410_10335096	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300012944\|Ga0137410_11516238	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300012948\|Ga0126375_11166975	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012948\|Ga0126375_11169526	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300012971\|Ga0126369_11692730	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300012971\|Ga0126369_11964803	Not Available	673	Open in IMG/M
3300016270\|Ga0182036_11530370	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300016270\|Ga0182036_11845988	Not Available	512	Open in IMG/M
3300016294\|Ga0182041_10532706	Not Available	1023	Open in IMG/M
3300016319\|Ga0182033_11534736	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300016319\|Ga0182033_11725532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	567	Open in IMG/M
3300016319\|Ga0182033_11941331	Not Available	536	Open in IMG/M
3300016422\|Ga0182039_11256577	Not Available	670	Open in IMG/M
3300017659\|Ga0134083_10515897	Not Available	537	Open in IMG/M
3300018053\|Ga0184626_10163474	Not Available	946	Open in IMG/M
3300018063\|Ga0184637_10739646	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300019233\|Ga0184645_1096097	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300019254\|Ga0184641_1184567	Not Available	634	Open in IMG/M
3300019255\|Ga0184643_1044509	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300021476\|Ga0187846_10041480	Not Available	2054	Open in IMG/M
3300025910\|Ga0207684_10047926	All Organisms → cellular organisms → Bacteria	3624	Open in IMG/M
3300026548\|Ga0209161_10483906	Not Available	546	Open in IMG/M
3300027654\|Ga0209799_1074291	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300027846\|Ga0209180_10517760	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300027873\|Ga0209814_10295175	Not Available	705	Open in IMG/M
3300030993\|Ga0308190_1070415	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300031092\|Ga0308204_10071469	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300031114\|Ga0308187_10011103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1854	Open in IMG/M
3300031421\|Ga0308194_10169009	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300031545\|Ga0318541_10309949	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300031912\|Ga0306921_12687780	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031941\|Ga0310912_10660405	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300031954\|Ga0306926_10759634	Not Available	1171	Open in IMG/M
3300032065\|Ga0318513_10683589	Not Available	503	Open in IMG/M
3300032180\|Ga0307471_104242254	Not Available	506	Open in IMG/M
3300032261\|Ga0306920_104063850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	530	Open in IMG/M
3300033289\|Ga0310914_10953899	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300034659\|Ga0314780_031921	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300034663\|Ga0314784_022283	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.75%
Host-Associated	Host-Associated	6.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.29%
Plants	Host-Associated → Plants	6.25%
Aquatic	Environmental → Aquatic	4.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.36%
Freshwater	Environmental → Aquatic → Freshwater	2.68%
Sediment	Environmental → Aquatic → Sediment	1.79%
Cave	Environmental → Terrestrial → Cave	0.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.68%
Loam	Environmental → Terrestrial → Soil → Loam	10.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.36%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_22490172	3300000033	Soil	FMPYSNPEFDAIVAATARESDPAKLRAFIERGIQILDRDVPSIVFSSAYIALAWWDNVQGHSTATKGANFWEGMRNETWWLAK*
F14TC_1010478601	3300000559	Soil	MPYSNPEFDAIVTATARESDPAKLRALIERGIQILDRDVPSIVFSSAYIALAWWDNVKGHGTATKGASFWEGMRNETWWLAK*
Ga0066672_107139291	3300005167	Soil	TARESDPAKLKELIQRGLAILDRDVPMGVIGNYLVIVAWWDNVKGHGTATKSINFWEGMRDEIWWLAK*
Ga0066388_1007837443	3300005332	Tropical Forest Soil	IVTATARESDPVKLKALIDRGIQFLDREIPSIVFGSASQPVAWWDNVKGHGTATKGVNFWEGMRDETWWLDK*
Ga0066388_1032478861	3300005332	Tropical Forest Soil	PEFDTLVAATARESDPAKLKELIQRGIAILDRDVPMCVIGNYLVIVAWWDNVKGHGTATKGVNFWEGMRNEIWWLDK*
Ga0066388_1049297821	3300005332	Tropical Forest Soil	TNPEFDALVVATARESDPSKLKELIQRGLAILDRDVPMCVIGNYLVIVAWWDNVKGHGTATKGINFWEGMRDEIWWLEK*
Ga0066388_1072684071	3300005332	Tropical Forest Soil	AATARESDPVKLQALIDQGIAILDRDVPAIVWANPVNPIAWWDNVKGHGTATKGIHFWEGMRNEIWWLEK*
Ga0070708_1003975881	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MCPLSCGQVHDAIVAATARESDPAKLRALIEQGIQILDRDVPSIIFSSAYIPIAWWDNVKGHGTATKGANFWEGMRDETWWLAK*
Ga0070708_1004720742	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TARESDPAKLKELMQRGIAILDRDVPMIMFASAFVPVAWWDNVKGHGTATKGVNFWEGMRDEIWWLEK*
Ga0066687_109967501	3300005454	Soil	IVAATARESDPAKLKALIDQGTAILDQDMPAVVWANPVVPIAWWDTVKGHGTATRGINFWEGMRNEIWWLAK*
Ga0070707_1002071311	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VAATARASDPVKLKALIDQGIKLLDRDIPSIVFASAYVPIAWWDNVKGHGTATKGVNVWEGMRNEIWWLEK*
Ga0070697_1019767061	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	FDAIVAETARESDPAKLKALMDRGIEILDRDIPAIVWSNPVIPIAWWDNVKGHGTATKSVNFWEGMRDEIWWLDK*
Ga0066691_107357552	3300005586	Soil	LVAATARESDPAKLKELIQQGLAILDRDVPMGVIGNYLVIVAWWDNVKGHGTAAKGINFWEGMRDEIWWLAK*
Ga0066903_1022752471	3300005764	Tropical Forest Soil	ESDPAKLKALITQGIEILDRDIPAIVWANPVVPMAWWDNVQGHGTATRGINFWEGMRDEIWWLAK*
Ga0081539_100043346	3300005985	Tabebuia Heterophylla Rhizosphere	MLSSLGQHHVHLESDPAKLKELIDQGIAILDQDIPAIVWANPVVPMAWWDNGQGHETATRGIHFWEGMRDEIWWLAK*
Ga0066696_104367672	3300006032	Soil	DGGYNFMPYSNPEFDAIVAATARESDAAKLRGLIEQGVQILDRDVPSIVFSSAYIGLAWWDNVKGHGMATKGANFWEGMRNETWCLAK*
Ga0075428_1006378802	3300006844	Populus Rhizosphere	TGGGYNFYGYTNPAFDAIVAATARESDPAKLKALINQGIAILEQDMPAVVWANPVVPMAWWDNVKGHGTATRGINFWEGMRDEIWWLEK*
Ga0075434_1010628051	3300006871	Populus Rhizosphere	MPYPNLEFDAIVTATARESDPAKLRALIERDIQSLDRDVPSIVFSSAYIALAWWDNVKGHGTATKGVNFWEGMRNETWWLAK*
Ga0099791_105394152	3300007255	Vadose Zone Soil	SNPAFDAIVAETARESDPAKLKALMDRGIEILDRDIPAIAWSNPVVPIAWWDNVKGHGTATKGVNFWEGMRDEIWWLEK*
Ga0099791_106342262	3300007255	Vadose Zone Soil	DAIVTATARESDPAKLRALIEQGIQILDRDVPSIVFSSAYIALAWWDNVKGHSTATKGANFWEGMRDETWWLAK*
Ga0099829_101367293	3300009038	Vadose Zone Soil	RESDPAKLKALMDRGIEILDRDIPAIAWSNPVVPIAWWDNVKGHGTATKSVNFWEGMRDEIWWLDK*
Ga0099827_106585001	3300009090	Vadose Zone Soil	VAATARASDPGKLKALIDQGIKLLDRDIPSIVFASAYVPIAWWDNVKGHGTATKGINVWEGMRNEIWWLEK*
Ga0099827_111770352	3300009090	Vadose Zone Soil	AKLKALMDRGIEILDRDIPAIAWSNPVVPIAWWDNVKGHGTATKSVNFWEGMRDEIWWLDK*
Ga0075418_125942261	3300009100	Populus Rhizosphere	FDAIVTATARESDSVKLKALIDRGIQFLDREIPSIVFGSASQPVAWWDNVKGHGTATKGVNFWEGMRDEIWWLDK*
Ga0066709_1026061232	3300009137	Grasslands Soil	GKLRGLIDQGIKILDRDIPSIMFASAFVSVAWWDKVKGHGTATKGVNFWEGMRNEIWWLGK*
Ga0099792_110488362	3300009143	Vadose Zone Soil	ESDPAKLKALIDRGIVILDRDVPAIVWANAVVPIAWWDNVKGHGTATRGIHFWEGMRNEIWWLDK*
Ga0075423_105235042	3300009162	Populus Rhizosphere	EFDASVTETARESDPVKLRGLIEQGIQILDRDVPSIVFSSAYIALAWWDNVKGHGTATKGASFWEGMRNETWWLAK*
Ga0075423_117588831	3300009162	Populus Rhizosphere	VAATAGETDPVKLKALIDQGIAILDRDQPTIVWATPVVPMAWWDNVKGHGTATRGINFWEGMRDEIWWLEK*
Ga0126374_103417072	3300009792	Tropical Forest Soil	MPYSNLEFDAIVTATARESDPAKLRALIERGIQILDRDVPSIVFSSAYIALAWWDNVKGHDTASKGAN
Ga0126380_116559122	3300010043	Tropical Forest Soil	ARESDPAKLKELIQQGLAILDRDVPMCVIGNYLVIVAWWDNVKGHGTATRGINFWEGMRDEIWWLEK*
Ga0126384_113524171	3300010046	Tropical Forest Soil	RSRRGWLQLRWLANPEFDAIVVATARETDPVKLKALMQRGIEILDWDVPMDIFGNDLVIVAWGDNAQGHGTATKGVNYWEGMRDAIWWLEK*
Ga0126382_104164572	3300010047	Tropical Forest Soil	VVRQRHIHVPGIQQEPPAFDAIVAATARASDPTQLKALIDQGIKLLDRDIPSIVFASAYVPIAWWDNVKGHGTATKGVNVWEGMRDEIWWLEK*
Ga0126382_105911492	3300010047	Tropical Forest Soil	DAIVAATARESDPAKLHALIEQGIQILDRDIPSIVFSSAYIALAWWDNVKGHGTATKGANFWEGMRNETWWLAK*
Ga0126382_123800132	3300010047	Tropical Forest Soil	VVATAQETDPVKLKALMQRGIEILDWDVPMDIFGNDLVIVAWGDNAKGHGTATKGVNYWEGMRDAIWWLEK*
Ga0126373_103913582	3300010048	Tropical Forest Soil	TAREADPMKLKALIDQGIKLLDRDIPSIVFASAYVPIAWWDNVKGHGTATKGVNVWEGMRDEIWWLDK*
Ga0126370_104863912	3300010358	Tropical Forest Soil	DPVKLKALIDQGIAILDRDQPTIVWSNPVVPMAWWDNVKGHGTATRGINFWEGMRDEIWWLEK*
Ga0126370_116247412	3300010358	Tropical Forest Soil	VADYWANSFKTDGGYNFSFYANPAFDAIVAATAREADPTKLKALIDQGIKLLDRDIPSIVFASAYVPIAWWDNVKGHGTATKGVNVWEGMRDEIWWLDK*
Ga0126376_132444891	3300010359	Tropical Forest Soil	DAIVAATARESDAAKLRALIEQGVQILDRDVPSIVFSSAYIPIAWWDNVKGHGTATKGANFWEGMRNDTWWLAK*
Ga0126372_112652111	3300010360	Tropical Forest Soil	MKLKALIDQGIKLLDRDIPSIVFASAYVPIAWWDNVKGHGTATKGVNVWEGMRDEIWWLDK*
Ga0126372_128941892	3300010360	Tropical Forest Soil	YNWYGYTNSEFDALVAATARESDPSKLKELIQRGLAILDRDVPMCIIGNYLVIVAWWDNVKGHGTATKGINYWEGMRDEIWWLEK*
Ga0126372_129085861	3300010360	Tropical Forest Soil	TARESDPVKLKALIDRGIQFLDREIPSIVFGSASQPVAWWDNVKGHGTATKGVNFWEGMRDEIWWLEK*
Ga0126378_131249631	3300010361	Tropical Forest Soil	DAIVVATARETDPVKLKELMQRGIEILDWDVPMYIFGNDLVIVAWGDNAQGHGTATKGVNYWEGMRDEIWWLEK*
Ga0126379_116655432	3300010366	Tropical Forest Soil	VAATARETDPVKLKALIDQGIAILDRDQPTIVWSNPVVPMAWWDNVKGHGTATRGINFWEGMRDEIWWLEK*
Ga0126381_1033641821	3300010376	Tropical Forest Soil	KLKELIDRGIAILDRDVPMIMFASAFVPVAWWDNVKGHGTATKGVNFWEGMRDEIWWLEK
Ga0126383_102304371	3300010398	Tropical Forest Soil	ETDPVKLKTLIDQGIAILDRDQPSIVWSNPVVPMAWWDNVKGHGTATRGINFWEGMRDEIWWLEK*
Ga0126383_111341371	3300010398	Tropical Forest Soil	TVRESDLAKLKELIQRGIAILDRDVSMCVIGNYLVIVAWWDNVKGHGTATKGINFWEGMRDEIWWLDK*
Ga0126383_123705311	3300010398	Tropical Forest Soil	EFDAIVTATARESDPAKLRALIERGIQILDRDVPSIVFSSAYIALAWWDNVKGHGTASKGANFWEGMRNETWWLAK*
Ga0126383_129143781	3300010398	Tropical Forest Soil	NPAFDAMVAATARESDRAKLQALINQGIAILDQDVPAIVWANPVVPVAWWDNAKGHGTATRSINFWEGMRDEIWWLAK*
Ga0137392_108870911	3300011269	Vadose Zone Soil	SNPEFDALVAATARESEPAKLKELIDRGIAIVHRDVPMVMFASAFVPVAWWDNVKGHGTAIKGVNFWEGMRDEIWWLDK*
Ga0137392_109163891	3300011269	Vadose Zone Soil	YNFYGYANPEFDAIVAATARETDPGKLKALLDQGIAILDREQPTIVWSNPVVPMAWWDNVKGHGTATRGIHFWEGMRNEIWWLEK*
Ga0137388_116137051	3300012189	Vadose Zone Soil	IVEATARESDPTKLKELIKRGIEILDRDVPMCVIGNYLVIVAWWDNVKGHGTATKGVNFWEGMRDEIWWLDK*
Ga0137363_115221781	3300012202	Vadose Zone Soil	NFYGYANPAFDAIVAATAREADPVKLKALIAQGIAILDRDVPAIVWANPVNPIAWWDNVKGHGTATKGIHFWEGMRNEIWWLEK*
Ga0137399_113272032	3300012203	Vadose Zone Soil	YSNPEFDAIVTATARESDPAQLRALIEQGIQILDRDVPSIVFSSAYIALAWWDNVKGHGTATKGANFWEGMRNETWWLAK*
Ga0137362_111242932	3300012205	Vadose Zone Soil	VEATARESDPAKLKELIQQGIAILDRDVPMFVIGNYVALIAWWDNLKGHGTATKGVNFWEGMRDEIWWLDK*
Ga0137380_110549101	3300012206	Vadose Zone Soil	YSNPEFDAIVAATARETDPVKLKALIDQGIAILDRDQPTIVWANAVAPIAWWDNVKGHGTATKGVNFWEGMRDEIWWVEK*
Ga0137380_116787851	3300012206	Vadose Zone Soil	ESDPGKLRGLIDQGIKILDRDIPSIMFASAFVSVAWWDKVKGHGTATKGVNFWEGMRNEIWWLEK*
Ga0137381_108290871	3300012207	Vadose Zone Soil	EFDALVAATARESDPAKLKELINRGIAILDRDVPMIMFASAFVPVAWWDNVKGHGTATKRANFWEGMRDEIWWLEK*
Ga0137379_112695541	3300012209	Vadose Zone Soil	MCCSAYSCRCYSDPFYGYANPAFDAIVAATARESDPAKLQALIAQGIAILDRDIPAIVWANPVVPMAWWDNVRGHGTATRGIHFWEGMRDETWWLAK*
Ga0137378_102610593	3300012210	Vadose Zone Soil	MCCSAYSCRCYSDPFYGYANPAFDAIVAATARESDPVKLKALIDQGIAILDRDVPAIVWANPVNPIAWWDNVKGHGTATKGIHFWEGMRNEIWWLEK*
Ga0137377_107134882	3300012211	Vadose Zone Soil	ARETDPVKLKALIDQGIAILDRDQPTIVWANPVVPMAWWDNVKGHGTAIRGINFWEGMRDEIWWRDK*
Ga0137377_117741912	3300012211	Vadose Zone Soil	VAATARETDPGKLKALLDQGIAILDRDQPTIVWSNPVVPMAWWDNVKGHGTATRGIHFWEGMRNEIWWLAK*
Ga0137372_106449582	3300012350	Vadose Zone Soil	GYANPAFDAIVAATARESDPAKLTALIAQGIEILDRDIPAIVWANPVVPMAWWDNVQGHGTATRGINFWEGMRDEIWWRAK*
Ga0137371_105772041	3300012356	Vadose Zone Soil	ESDPVKLKALMAQGIEILDRDIPAIVWANAVAPIAWWDNVKGHGTAIRGINFWEGMRDEIWWRDK*
Ga0137371_108751072	3300012356	Vadose Zone Soil	AATARESDPAKLRALIEQGIQILDRDVPSIIFSSAYIPIAWWDNVKGHGTATKGANFWEGMRDETWWLAK*
Ga0137375_106121002	3300012360	Vadose Zone Soil	AYSNLELDAIVAATARESDPGKLRGLIDQGIKILDRDIPSIMFASAFVSVAWWDKVKGHGTATKGVNFWEGMRNEIWWLGK*
Ga0137375_112204392	3300012360	Vadose Zone Soil	PVKLRELIEQGIKILDRDVPSVVFASAFVPIAWWDNLKGHGTATKGANFWEGMRNEIWWLAK*
Ga0137360_106961652	3300012361	Vadose Zone Soil	TARESDPAKLKALMAQGIEILDRDVPAIAWSTPVVPIAWWDNVKGHGTATKGVNYWEGMRDEIWWLEK*
Ga0137361_102133543	3300012362	Vadose Zone Soil	SNLALDAIVATTARESDPGKLRGLIDQGIKILDRDIPSIMFASAFVSVAWWDKVKGHGTATKGVNFWEGMRNEIWWLEK*
Ga0137396_101925521	3300012918	Vadose Zone Soil	NPEFDAIVAATARESDPATLHALIEQGIQILDRDVPSIVFSSAYIPIAWWDNVKGHGTATKGANFWEGMRNETWWLAK*
Ga0137404_107680721	3300012929	Vadose Zone Soil	ANPAFDAIVAATARESDPVKLKALIDQGIAILDRDVPAIVWANPVNPIAWWDNVRGHGTATKGIHFWEGMRNEIWWLEK*
Ga0137404_115228352	3300012929	Vadose Zone Soil	HVADYWGNWMKTGGGYNFIPYSHPEFDAIVAATARESAPVKLKALMDRGITFLDREIPSIVFGSASQPVAWWDNVKGHGAATKGANFWEGMRNETWWLAK*
Ga0137407_101380233	3300012930	Vadose Zone Soil	PEFDAIVTATARESDPAKLRVLIEQGIQILDRDVPSIIFSSAYIALAWWDNVKGHGTATKGANFWEGMRDETWWLAK*
Ga0137407_115575421	3300012930	Vadose Zone Soil	DYWANTFKTGGGYNWYAYSNLALDAIVAATARESDPGKLRGLIDQGIKILDRDIPSIMFASAFVSVAWWDKVKGHGTATKGVNFWEGMRNEIWWLGK*
Ga0137410_103350962	3300012944	Vadose Zone Soil	EFDAIVAATARESDPGKLKALMNRGITFLDREIPSIVFGSASQPVAWWDNVKGHGTATKGVNFWEGMRNEIWWLEK*
Ga0137410_115162381	3300012944	Vadose Zone Soil	AIVAATARESDPARLHALIERGIQILDRDVPSIVFSSAYIALAWWDNVKGHGTATKGANFWEGMRNETWWLTK*
Ga0126375_111669752	3300012948	Tropical Forest Soil	FKTGGGYKFYGYSNPAFDAIVVATARESEPVKLKALIAQGIEILDRDFPAIVWSTPVVPIAWWDNVKGHGTATKSINFWEGMRDEIWWLQK*
Ga0126375_111695262	3300012948	Tropical Forest Soil	DPTKLKALIDQGIKLLDRDIPSIVFASAYVPIAWWDNVKGHGTATKGVNVWEGMRDEIWWLDK*
Ga0126369_116927303	3300012971	Tropical Forest Soil	TARESDPVKLQALIDQGIAILDRDVPAIVWANPVNPIAWWDNVKGHGTATKGIHFWEGMRNEIWWLEK*
Ga0126369_119648032	3300012971	Tropical Forest Soil	DPMKLKALIDQGIKLLDRDIPSIVFASAYVPIAWWDNVKGHGTATKGVNVWEGMRDEIWWLEK*
Ga0182036_115303702	3300016270	Soil	TATARESDPAKLRALIERGIQILDRDVPSIVFSSAYIALAWWDNVKGHGTASKGANFWEGMRNETWWLAK
Ga0182036_118459881	3300016270	Soil	NAGVKTEGGYNFYGYANPAFDAIVAATARESDPTKLKALIDQGIAILDRDQPAIVWANPVNPIAWWDNVKGHGTATKGIHFWEGMRNEIWWLEK
Ga0182041_105327063	3300016294	Soil	YGYANPEFDAIVAATARETDPVKLKALIDQGIALLDRDQPTIVWSNPVVPMAWWDNVKGHGTATRGINFWEGMRDEIWWLEK
Ga0182033_115347362	3300016319	Soil	RESDPAKLKELINQGIAILDRDIPAIVWANPVVPMAWWDNVQGHGTATRGIYFWEGMRDEIWWLAK
Ga0182033_117255322	3300016319	Soil	DPAKLKELIQRGIAILDRDVPMCVIGNYLVIVAWWDNVKGHGTATKGINFWEGMRDEIWWLDK
Ga0182033_119413311	3300016319	Soil	YANPAFDAIVAATARESDPAKLKALIDQGIAILDQDVPAVVWANPVVPMAWWDNVQGHQTATRGINFWEGMRDEIWWLAK
Ga0182039_112565771	3300016422	Soil	VAAAARESDPAKLKELMNRGIAILDRDVPMIMFASAFVSVAWWDNVKGHGTATKGVNFWEGMRDEIWWLDK
Ga0134083_105158972	3300017659	Grasslands Soil	NFMPYSNPEFDAIVAATARESDPAKLRALIEQGIQILDRDVPSIIFSSAYIPIAWWDNVKGHGTATKGANFWEGMRNETWWLAK
Ga0184626_101634741	3300018053	Groundwater Sediment	NFYGYANPAFDAIVAATARESDPAKLKALMDRGIEILDRDIPAIAWSNPVVPIAWWDNVKGHGTATKSVNFWEGMRDEIWWLDK
Ga0184637_107396461	3300018063	Groundwater Sediment	ARESDPAKLKALMDRGIEILDRDIPAIAWSNPVVPIAWWDNVKGHGTATKGVNFWEGMRDEIWWLDK
Ga0184645_10960973	3300019233	Groundwater Sediment	ATARESDPTKLRALIEQGIQILDRDVPSIIFSSAYIALAWWDNVKGHGTATKGANFWEGMRDETWWLAK
Ga0184641_11845671	3300019254	Groundwater Sediment	FKTAGGYNFIPYSNPAFDAIVDATAREADPVKLRALIERGIEILDRDVPSIVFASAFIPVAWWDNVKGHGTAAKGVNFWEGMRDEIWWLDK
Ga0184643_10445091	3300019255	Groundwater Sediment	IVAATARESDPAKLKALMDRGIEILDRDIPAIVWSTVAIPIAWWDNLKGHGTATKGVNFWEGMRDEIWWLDK
Ga0187846_100414802	3300021476	Biofilm	YGYANPAFDAIVAATARETDPVKLKVVIDQGIAILDRDQPAIVWANPVNPIAWWDTVKGHGTATKGINFWEGMRNEIWWLDK
Ga0207684_100479264	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MCPLSCGQVHDAIVAATARESDPAKLRALIEQGIQILDRDVPSIIFSSAYIPIAWWDNVKGHGTATKGANFWEGMRDETWWLAK
Ga0209161_104839061	3300026548	Soil	ANPAFDAIVAATARESDPAKLTALIAQGIEILDRDIPAIVWANPVVPMAWWDNVQGHGTATRGINFWEGMRDEIWWRAK
Ga0209799_10742912	3300027654	Tropical Forest Soil	AIVTATARESDPAKLRALIERGIQILDRDVPSIVFSSAYIALAWWDNVKGHGTASKGANFWEGMRNETWWLAK
Ga0209180_105177601	3300027846	Vadose Zone Soil	ATARETDPVKLKALLDQGIAILDREQPTIVWSNPVVPMAWWDNVKGHGTATRGIHFWEGMRNEIWWLEK
Ga0209814_102951751	3300027873	Populus Rhizosphere	FYGYTNPEFDAIVAATARETDPVQLKTLIHQGIAILDRDQPTIVWSTPVVPMAWWDNVKGHGTATRGINFWEGMRDEIWWLEK
Ga0308190_10704152	3300030993	Soil	IVTATARESDPAKLRALIEQGIQILDRDVPSIIFSSAYIALAWWDNVKGHGTATKGANFWEGMRDETWWLAK
Ga0308204_100714691	3300031092	Soil	EFDAIVTATARESDPAKLRALIEQGIQILDRDVPSIIFSSAYIALAWWDNVKGHGTATKGANFWEGMRDETWWLAK
Ga0308187_100111033	3300031114	Soil	FDAIVAETARESDPAKLKALMDRGIEILDRDIPAIAWSNPVVPIAWWDNVKGHGTATKGVNFWEGMRDEIWWLEK
Ga0308194_101690092	3300031421	Soil	FYGYSNPAFDAIVAETARESDPAKLKALMDRGIEILDRDIPAIAWSNPVVPIAWWDNVKGHGTATKGVNFWEGMRDEIWWLEK
Ga0318541_103099492	3300031545	Soil	GYANPAFDAIVAATARESDPTKLKALIDQGIAILDRDQPAIVWANPVNPIAWWDNVKGHGTATKGIHFWEGMRNEIWWLEK
Ga0306921_126877802	3300031912	Soil	TARESDPTKLKELIDRGIAILDRDVPMIMFASAFVPVAWWDNVKGHGTATKGVNYWEGMRDEIWWLEK
Ga0310912_106604051	3300031941	Soil	VADYWNAGFKTEGGYNFYGYANPAFDAIVAATARESDPTKLKALIDQGIAILDRDQPAIVWANPVNPIAWWDNVKGHGTATKGIHFWEGMRNEIWWLEK
Ga0306926_107596341	3300031954	Soil	PMKLKALIDQGIKLLDRDIPSIVFASAYVPIAWWDNVKGHGTATKGIHFWEGMRNEIWWLEK
Ga0318513_106835892	3300032065	Soil	WNAGFKTEGGYNFYGYANPAFDAIVAATARESDPTKLKALIDQGIAILDRDQPAIVWANPVNPIAWWDNVKGHGTATKGIHFWEGMRNEIWWLEK
Ga0307471_1042422541	3300032180	Hardwood Forest Soil	DPVKLKALIDRGIQFLDREIPSIVFGSASQPVAWWDNVKGHGTATKGVNFWEGMRNEIWWLEK
Ga0306920_1040638502	3300032261	Soil	DPVKLHALIDQGIAILDRDVPAIVWANPVNPIAWWDNVKGHGTATKGIHFWEGMRNEIWWLEK
Ga0310914_109538992	3300033289	Soil	YNFYGYANPAFDAIVAATARESDPTKLKALIDQGIAILDRDQPAIVWANPVNPIAWWDNVKGHGTATKGIHFWEGMRNEIWWLEK
Ga0314780_031921_689_937	3300034659	Soil	MPYSNAEFDAIVAATARESDPAKLRALIEQGIQILDRDVPSIVFSSAYIALAWWDNVQGHSTATKGANFWEGMRNETWWLAK
Ga0314784_022283_816_1004	3300034663	Soil	PAKLRALIEQGIQILDRDVPSIVFSSAYIALAWWDNVQGHGAATKGANFWEGMRNETWWLAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083870

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences