NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F083952

Metagenome / Metatranscriptome Family F083952

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F083952
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 95 residues
Representative Sequence MHYRIEMSPTRRGFARINFPGRMIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSPIDGEISPSAETYLSNTP
Number of Associated Samples 102
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 5.36 %
% of genes near scaffold ends (potentially truncated) 36.61 %
% of genes from short scaffolds (< 2000 bps) 93.75 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (52.679 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil
(8.036 % of family members)
Environment Ontology (ENVO) Unclassified
(43.750 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.107 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.60%    β-sheet: 29.60%    Coil/Unstructured: 52.80%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.79
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.60.1.0: automated matchesd3ia8a_3ia80.56933
c.55.1.0: automated matchesd4h0pa14h0p0.56331
f.4.3.4: Outer membrane protein transport proteind3pgsa13pgs0.55797
b.60.1.8: Rv2717c-liked6r3wa_6r3w0.55667
c.55.1.0: automated matchesd3sk3a13sk30.5555

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF08309LVIVD 3.57
PF12697Abhydrolase_6 2.68
PF02492cobW 1.79
PF01790LGT 0.89
PF13416SBP_bac_8 0.89
PF01494FAD_binding_3 0.89
PF07287AtuA 0.89
PF00483NTP_transferase 0.89
PF03109ABC1 0.89
PF08402TOBE_2 0.89
PF16326ABC_tran_CTD 0.89
PF10518TAT_signal 0.89
PF00890FAD_binding_2 0.89
PF14330DUF4387 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG5276Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domainFunction unknown [S] 3.57
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.79
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.89
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.89
COG0661Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB familySignal transduction mechanisms [T] 0.89
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.89
COG0682Prolipoprotein diacylglyceryltransferaseCell wall/membrane/envelope biogenesis [M] 0.89

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms52.68 %
UnclassifiedrootN/A47.32 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004480|Ga0062592_101318858All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium682Open in IMG/M
3300005335|Ga0070666_10100828Not Available1990Open in IMG/M
3300005336|Ga0070680_100677495All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300005341|Ga0070691_11104337Not Available500Open in IMG/M
3300005343|Ga0070687_100283335Not Available1044Open in IMG/M
3300005355|Ga0070671_100937830Not Available757Open in IMG/M
3300005367|Ga0070667_101060128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium757Open in IMG/M
3300005436|Ga0070713_100982652Not Available814Open in IMG/M
3300005458|Ga0070681_10674401All Organisms → cellular organisms → Bacteria → Proteobacteria949Open in IMG/M
3300005529|Ga0070741_10977525All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium727Open in IMG/M
3300005538|Ga0070731_10793309All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300005541|Ga0070733_10276545All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1107Open in IMG/M
3300005543|Ga0070672_101735729Not Available561Open in IMG/M
3300005548|Ga0070665_101626053Not Available654Open in IMG/M
3300005549|Ga0070704_102223509Not Available510Open in IMG/M
3300005560|Ga0066670_10340995Not Available913Open in IMG/M
3300005564|Ga0070664_100957008All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300005577|Ga0068857_101126259Not Available758Open in IMG/M
3300005617|Ga0068859_100435197All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1408Open in IMG/M
3300005764|Ga0066903_108784846Not Available513Open in IMG/M
3300005841|Ga0068863_102673391Not Available508Open in IMG/M
3300005843|Ga0068860_101881771Not Available620Open in IMG/M
3300005891|Ga0075283_1052504All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300006034|Ga0066656_11038792Not Available526Open in IMG/M
3300006800|Ga0066660_10604562All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium916Open in IMG/M
3300006904|Ga0075424_101757976All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium656Open in IMG/M
3300007255|Ga0099791_10680323All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300007821|Ga0104323_111541All Organisms → cellular organisms → Bacteria1222Open in IMG/M
3300009038|Ga0099829_10995818Not Available695Open in IMG/M
3300009088|Ga0099830_10803778All Organisms → cellular organisms → Bacteria → Proteobacteria776Open in IMG/M
3300009089|Ga0099828_11018714All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300009090|Ga0099827_11239182All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300009090|Ga0099827_11493550Not Available588Open in IMG/M
3300009094|Ga0111539_10390831Not Available1620Open in IMG/M
3300009094|Ga0111539_12706958All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300009177|Ga0105248_10481129Not Available1399Open in IMG/M
3300009444|Ga0114945_10475387All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300009553|Ga0105249_11000997All Organisms → cellular organisms → Bacteria → Proteobacteria905Open in IMG/M
3300009553|Ga0105249_13568684Not Available501Open in IMG/M
3300009610|Ga0105340_1277839All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300009789|Ga0126307_10111908All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2169Open in IMG/M
3300010036|Ga0126305_10610357All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300010037|Ga0126304_10285781All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300010040|Ga0126308_10543754Not Available788Open in IMG/M
3300010040|Ga0126308_10759113Not Available670Open in IMG/M
3300010041|Ga0126312_10317289Not Available1101Open in IMG/M
3300010166|Ga0126306_10346745Not Available1153Open in IMG/M
3300010373|Ga0134128_11660069Not Available703Open in IMG/M
3300010373|Ga0134128_12237975Not Available602Open in IMG/M
3300010396|Ga0134126_11227310All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium832Open in IMG/M
3300010399|Ga0134127_12621226Not Available584Open in IMG/M
3300011271|Ga0137393_10296569All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1376Open in IMG/M
3300011414|Ga0137442_1133972All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300011423|Ga0137436_1142096All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium642Open in IMG/M
3300011440|Ga0137433_1209630Not Available639Open in IMG/M
3300011441|Ga0137452_1049768Not Available1330Open in IMG/M
3300011444|Ga0137463_1118996All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300011444|Ga0137463_1141596Not Available905Open in IMG/M
3300011445|Ga0137427_10238447All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300012096|Ga0137389_10896240Not Available761Open in IMG/M
3300012469|Ga0150984_103482657All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300013297|Ga0157378_11062299Not Available846Open in IMG/M
3300013306|Ga0163162_12807368Not Available561Open in IMG/M
3300014058|Ga0120149_1009686All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes2069Open in IMG/M
3300014325|Ga0163163_13016157Not Available525Open in IMG/M
3300014968|Ga0157379_12244677Not Available543Open in IMG/M
3300015252|Ga0180075_1089403Not Available544Open in IMG/M
3300015372|Ga0132256_102846526Not Available582Open in IMG/M
3300015373|Ga0132257_103708963Not Available556Open in IMG/M
3300015374|Ga0132255_103530294Not Available665Open in IMG/M
3300017961|Ga0187778_11279581Not Available516Open in IMG/M
3300017973|Ga0187780_10139746All Organisms → cellular organisms → Bacteria → Proteobacteria1677Open in IMG/M
3300018088|Ga0187771_10070817Not Available2757Open in IMG/M
3300018422|Ga0190265_13604954All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300018469|Ga0190270_12364249All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300019888|Ga0193751_1005013All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7476Open in IMG/M
3300020020|Ga0193738_1046119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1324Open in IMG/M
3300020070|Ga0206356_10911510All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300020078|Ga0206352_10078181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium676Open in IMG/M
3300021081|Ga0210379_10214331All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium832Open in IMG/M
3300021477|Ga0210398_10411176All Organisms → cellular organisms → Bacteria1103Open in IMG/M
3300021861|Ga0213853_10661003Not Available612Open in IMG/M
3300022721|Ga0242666_1019230Not Available1266Open in IMG/M
3300025324|Ga0209640_10514691All Organisms → cellular organisms → Bacteria974Open in IMG/M
3300025903|Ga0207680_10038781All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2759Open in IMG/M
3300025912|Ga0207707_10542501All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300025912|Ga0207707_10646964All Organisms → cellular organisms → Bacteria → Proteobacteria891Open in IMG/M
3300025915|Ga0207693_11301538Not Available544Open in IMG/M
3300025918|Ga0207662_10655465Not Available733Open in IMG/M
3300025921|Ga0207652_11758700Not Available525Open in IMG/M
3300025927|Ga0207687_11634338Not Available553Open in IMG/M
3300025928|Ga0207700_10168658All Organisms → cellular organisms → Bacteria1824Open in IMG/M
3300025930|Ga0207701_10537522Not Available998Open in IMG/M
3300025931|Ga0207644_10784780All Organisms → cellular organisms → Bacteria → Proteobacteria796Open in IMG/M
3300026116|Ga0207674_10293401All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300026118|Ga0207675_102528768Not Available524Open in IMG/M
3300027660|Ga0209736_1075551All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300027867|Ga0209167_10438386All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium714Open in IMG/M
3300027869|Ga0209579_10216059All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1027Open in IMG/M
3300028379|Ga0268266_11320083Not Available697Open in IMG/M
3300031234|Ga0302325_13288740Not Available513Open in IMG/M
3300031708|Ga0310686_108550194Not Available617Open in IMG/M
3300031962|Ga0307479_10607972All Organisms → cellular organisms → Bacteria → Proteobacteria1075Open in IMG/M
3300031965|Ga0326597_10008399All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales13933Open in IMG/M
3300031965|Ga0326597_10057617All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4844Open in IMG/M
3300032002|Ga0307416_102335860Not Available635Open in IMG/M
3300032174|Ga0307470_11376509All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300032783|Ga0335079_10765579All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1003Open in IMG/M
3300032892|Ga0335081_10527151All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1478Open in IMG/M
3300032892|Ga0335081_10661502Not Available1275Open in IMG/M
3300032892|Ga0335081_10779696All Organisms → cellular organisms → Bacteria → Proteobacteria1146Open in IMG/M
3300033233|Ga0334722_10573275All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium807Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil8.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.14%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.14%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil6.25%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.25%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.46%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.46%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.46%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.57%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.68%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.68%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.79%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.79%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.89%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.89%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.89%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.89%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.89%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.89%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.89%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005891Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_304EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007821Permafrost core soil microbial communities from Svalbard, Norway - sample 2-10-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011414Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2EnvironmentalOpen in IMG/M
3300011423Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2EnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300011441Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015252Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10DEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020020Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062592_10131885823300004480SoilINFPGRIIALEASQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVAQATVRAVAQLTDSPIDGEITPNAETYLSSQL*
Ga0070666_1010082823300005335Switchgrass RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSSIDGEISPSAEAYLSNTP*
Ga0070680_10067749513300005336Corn RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSPIDGEISPSAESLI*
Ga0070691_1110433713300005341Corn, Switchgrass And Miscanthus RhizosphereMHYRIEMSPTRRGFARINFPGRIIALEASQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVAQATVRAVAQLTDSPIDGEITPNAETYLSSQL*
Ga0070687_10028333523300005343Switchgrass RhizosphereMHYRIEMSPTRRGFARINFPGRMIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSPIDGEISPSAETYLSNTP*
Ga0070671_10093783023300005355Switchgrass RhizosphereINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSSIDGEISPSAEAYLSNTP*
Ga0070667_10106012813300005367Switchgrass RhizosphereDLPGGLGYLPPAMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSSIDGEISPSAEAYLSNTP*
Ga0070713_10098265223300005436Corn, Switchgrass And Miscanthus RhizosphereMHYRIEISQTRKGFARLNFPGRVVELAANEHVGPVWLVGVLDAAGDAEGSVTVRADNAGDAVWRVAQATVRAFSLLTESPIEDAIKSSPDEYLTNLF*
Ga0070681_1067440113300005458Corn RhizosphereTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSPIDGEISPSAESLI*
Ga0070741_1097752523300005529Surface SoilRVHFPGRILALEARRHAGAAWLVGVGDAEAPEAGSVTVRAGHAGDAVWRVAQATVRAVAELIGEPIEGAVTVEFEDSLGDLA*
Ga0070731_1079330913300005538Surface SoilESSAAGVDFAPPPRLSCGTMRYRIEVSHTRTGFARVTFPGRIIALEANQHVGPVWMVGVTDLGGEEEGSVTVRADNAGDAVWRVARATVRAVALLTDTPIEGEITPAAEEC*
Ga0070733_1027654523300005541Surface SoilMRYRIEVSHTRTGFARVTFPGRIIALEANQHMGPVWLVGVTDLSGDQEGSVTVRADNAGDAVWRVARATVRAVALLTDTPIEGEITPTTEDH*
Ga0070672_10173572923300005543Miscanthus RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSSIDGEISPSAEA
Ga0070665_10162605323300005548Switchgrass RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGEREGSVTVRADHAGDAVWRVARATVRAVAQLTDSPI
Ga0070704_10222350913300005549Corn, Switchgrass And Miscanthus RhizosphereMHYRIEISQTRKGFARLNFPGRVVELEATEHVGPVWLVGVVDATGEGEGAVTVRADNAGDAVWRVAQATVRAFALLTESPIEDAIKSSPDDYLTNLL*
Ga0066670_1034099543300005560SoilMDYRIEISTTRNGIARVNFPGRVIGLEATQHVGPVWLVNVADQSGDQKGSVTVRADSAGDAVWRVAQAAVWAMAELTDSPLD
Ga0070664_10095700823300005564Corn RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGEREGSVTVRADHAGDAVWRVARATVRAVAQLTDSPINGEISPSAETYLSNTP*
Ga0068857_10112625913300005577Corn RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGEREGSVTVRADHAGDAVWRVARATVRAVAQLTDSPINGE
Ga0068859_10043519723300005617Switchgrass RhizosphereMHYRIEMSPTRRGFARINFPGRMIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVAQATVRAVAQLTDSPIDGEITPNAETYLSSTP*
Ga0066903_10878484623300005764Tropical Forest SoilMQYRIEMSPARKGFARINFPGRVIALEATQHVGPVWLVGVIDLTGSHHEGSVTVRADSAGDTVWRVARATVRAVAQLTDDTI
Ga0068863_10267339123300005841Switchgrass RhizospherePRPPTQVGQNPSAGAVDLPGGLGYLPPAMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDNPIDGEISPSAETYTNSKP*
Ga0068860_10188177123300005843Switchgrass RhizosphereMSQTRKGFARVNFPGRIIALEATQHVGPVWLVDVTDLSGEQVGSVTVRADNAGDAVWRVAQATVRAVSQLTGTPIEGEIKPSPDDYLSKSA*
Ga0075283_105250423300005891Rice Paddy SoilMDSTASRWLSWRAMQYRIEISQARQGYARINLPNRIIALEATQHVGPVWLVGVQDLTAEAEGSVTVRADNASDAVWRVAQAAVRAVSELTDSPIEGEIKPSTEDFLNTQPINP*
Ga0066656_1103879223300006034SoilMQYRIETSPTRIGFARVNFAGRVIALEANQHVGPVWLVGVTDLTGQGEGSATVRAGNAGDAVWRVAQAAVRAVAELTGSPIQGEIKPSPEDPSTTQP*
Ga0066660_1060456223300006800SoilMDYRIEISTTRNGIARVNFPGRVIGLEATQHVGPVWLVNVADQSGDQKGSVTVRADSAGDAVWRVAQAAVRAMAELTDSPLDEELTDNPEKYLTSL*
Ga0075424_10175797623300006904Populus RhizosphereRAWLSWPTMHYRIEMSPTRRGFARINFPGRMIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVAQATVRAVAQLTDSPIDGEITPNAETYLSSTP*
Ga0099791_1068032313300007255Vadose Zone SoilQGHARINMPGRIIELEATQHVGPVWLVGVLDVTGNVEGSLTVRADGASDAVWRVARATVRAVSELTDSPIDGEIKPTPTNS*
Ga0104323_11154123300007821SoilMRYRIEVSQSRKGFARVNFPGRIIALEATQHVGPVWLVGVLDMTGETEGSLTVRADNASDAVWRVAQATVRAVSELTDSPIEGEIRASSDDSFSNSP*
Ga0099829_1099581813300009038Vadose Zone SoilMQYRIEVSQSRQGHARINMPGRIIELEATQHVGPVWLVGILDVTADAEGSVTVRADGASDAVWRVARATVRAVSELTDSPIDGEIKPTLTSS
Ga0099830_1080377823300009088Vadose Zone SoilSQSRQGHARINMPGRIIELEATQHVGPVWLVGVLDVTGDVEGSLTVRADGASDAVWRVARATVRAVSELTDSPIDGEIRPTLTSS*
Ga0099828_1101871423300009089Vadose Zone SoilMDTAAQQWLSLRAMQYRIEVSQARQGYARINMPGRIIALEATQHVGPVWLVGVLDVTGDVEGSLTVRADGASDAVWRVARATVRAVSELTDSPIDGEIKPTPTNS*
Ga0099827_1123918213300009090Vadose Zone SoilMQYRIEVSQSRQGHARINMPGRIIELEATQHVGPVWLVGVLDVTGDVEGSLTVRADGASDAVWRVARATVRAVSELTDSPIDGEIKPTLTSS*
Ga0099827_1149355013300009090Vadose Zone SoilMGIVALMHYRIEISQTRNGFARLNFPGRVVELEASQHVGPVWLVGVVDATSDGGGDGEGSVTVRADNAGDAVWRVAQATVRAFALLTESPIEDAIKPTPDDYLTNLL*
Ga0111539_1039083123300009094Populus RhizosphereMHYRIEMSPTRRGFARINFPGRIIALEASQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVAQATVRAVAQLTDSPIDGEISPNAETYLSS*
Ga0111539_1270695823300009094Populus RhizosphereMHYRIEMSPTRRGFARINFPGRIIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHGGDAVWRVAQATVRAVAQLTDSPIEGEISPSAETYLNSQP*
Ga0105248_1048112923300009177Switchgrass RhizosphereYLRPAMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGEREGSVTVRADHAGDAVWRVARATVRAVAQLTDSPINGEISPSAETYLSNTP*
Ga0114945_1047538723300009444Thermal SpringsMRYRIEVSHARTGFARVNLPGRVIALEATQHVGPVWLVDVSDLNGDQEGSLTVRADNAGDAVWRVARATVRAVSELTNSPLEGEIGSNPDAHPGNSP*
Ga0105249_1100099713300009553Switchgrass RhizosphereMHYRIEMSPTRRGFARINFPGRIIALEATQHVGPVWLVGVTDMTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDNPIDGEISPSAETYTNSKP*
Ga0105249_1356868413300009553Switchgrass RhizosphereMRYRIEMSPTRKGFARINFPGRVIALEATQHVGPVWLVGVIDLIGEQEGSVTVRADHAGDAVWRVAQATVRAVSQLTGSPIDGDIKPS
Ga0105340_127783923300009610SoilMHYRIEMSLTRRGFARINFPGRIIALEASQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVAQATVRAVAQLTDSPIDGDITPNAETYLSSQL*
Ga0126307_1011190823300009789Serpentine SoilMQYRIEMSPARNGFARINFPGRIIALEAAQHVGPVWLVGVTDLTGNQEGSVTVRADNAGDAVWRVARATVRAVARLTNDTIEGEIKPNSADHLGNLP*
Ga0126305_1061035723300010036Serpentine SoilMQYRIEMSPARNGFARINFPGRIIALEATQHVGPVWLVGVTDLTGNQEGSVTVRADNAGDAVWRVARATVRAVAQLTNDTIEGEIKPNSAEHLGNLP*
Ga0126304_1028578123300010037Serpentine SoilMQYRIEMSPARNGFARINFSGRIIALEAAQHVGPVWLVGVTDLTGNQEGSVTVRADNAGDAVWRVARATVRAVAQLTNDTIEGEIKPNSADHLGNLP*
Ga0126308_1054375413300010040Serpentine SoilARINFPGRVIALEATQHVGPVWLVGVTDLTGNHEGSVTVRADNAGDAVWRVARATVRAVAQLTNDTIEGEIKPNSADHLGNLP*
Ga0126308_1075911313300010040Serpentine SoilMQYRIEMSPARNGFARINFPGRIIALEATQHVGAVWLVGVTDLTGNQEGSVTVRADNAGDAVWRVARATVRAVAQLTNDTIEGEIKRNSTDHLGNPP*
Ga0126312_1031728923300010041Serpentine SoilMQYRIEMSPARNGFARINFPGRIIALEATQHVGAVWLVGVTDLTGNQEGSVTVRADNAGDAVWRVARATVRAVAQLTNDTIEGEIKPNSTDHLGNLS*
Ga0126306_1034674513300010166Serpentine SoilMQYRIEMSPARNGFARINFPGRIIALEATQHVGAVWLVGVTDLTGNQEGSVTVRADNAGDAVWRVARATVRAVAQLTNDTIEGEIKPNSADHLGNLP*
Ga0134128_1166006923300010373Terrestrial SoilMNYRIEVSPSRKGAARVNFPGRVIALDATQHVGPVWLVDVHDVTGDARASVTVRADNAGDAVWRVARATVRAVAELTGSPIEGEIKPSSEDS*
Ga0134128_1223797513300010373Terrestrial SoilMHYRIEMSQTRKGSARVNFPGRTIAIEASQHVGPVWLVGVSDFVGETEGSVTIRAENAGDAVWRVARATVRAVSQLTGSPIEGEIRPGPDEYRHDDLSGNLPQGE*
Ga0134126_1122731023300010396Terrestrial SoilMNYRVEVSPSRKGAARVNFPGRVIALDATQHVGPVWLVDVHDVTGDARASVTVRADNAGDAVWRVARATVRAVAELTGSPIEGEIKPSSEDS*
Ga0134127_1262122613300010399Terrestrial SoilMHYRIEMSPTRRGFARINFPGRIIALEASQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVAQATVRAVAQLTDSPIDGEITPNAETYLSSTP*
Ga0137393_1029656923300011271Vadose Zone SoilMQYRIEVSQSRQGHARINMPGRVIELEATQHVGPVWLVGVLDVTGDVEGSLTVRADGASDAVWRVARATVRAVSELTDSPIDGEIRPTLTNS*
Ga0137442_113397213300011414SoilRLNFPGRVVELEASQHFGPVWFVGVLDATGEGEGSVSVRADNAGDAVWRVAQATVRAFAQLTDSPIEDAIKPSPDDYFTNLL*
Ga0137436_114209623300011423SoilMHYRIEISQTRNGFARLNFPGRVIALEATEHVGPVWLVGVLDATGEGEGAVTVRADNAGDAVWRVAQATVRAFAILTESPIEDAIKSSPNDYLTNLL*
Ga0137433_120963013300011440SoilMHYRIEISQTRKGFARLNFPGRVVELEASEHVGPVWLVGVLDATGEGEGAVTVRADNAGDAVWRVAQATVRAFAILTESPIEDAIKSSPDDYLTNLL*
Ga0137452_104976823300011441SoilGFARLNFPGRVIALEATQHVGPVWLVGVVDTTGDEDGEGSVTVRADNAGDAVWRVAQATVRAFALLTESPIEDAIKSSPDDYLTNLL*
Ga0137463_111899623300011444SoilMHYRIEISQTRKGFARLNFPGRVIALEASEHVGPVWLVGVLDATGDGEGSVTVRADNAGDAVWRVAQATVRAFALLTESPIEDAIKSSPDDYLTNLL*
Ga0137463_114159613300011444SoilMGIVALMHYRIEISRTRDGFARLNFPGRVIALEATQHVGPVWLVGVVDTTGDRDGEGSVTVRADNAGDAVWRVAQATVRAVALLTKSPIEDAIKSSPDDYLTNLV*
Ga0137427_1023844713300011445SoilMHYRIEISQTRKGFARLNFPGRVVELEASEHVGPVWLVGVLDATGEGEGAVTVRADNAGDAVWRVAQATVRAFALLTESPIEDAIKPRPDDYFTNLL*
Ga0137389_1089624013300012096Vadose Zone SoilMQYRIEVSQSRQGHARINMPGRVIELEATQHVGPVWLVGVLDVTGDVEGSLTVRADGASDAVWRVARATVRAVSELTDSPIDGEIKPTLTSS*
Ga0150984_10348265713300012469Avena Fatua RhizosphereRIEISQTRKGFARLNFPGRVVELDATQHVGPVWLVGVLDTTGDGLGSVTVRAENAGDAVWRVAQATVRAFSVLTESPIEDAIKSSPDEYLTNLL*
Ga0157378_1106229913300013297Miscanthus RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGEREGSVTVRADHAGDAVWRVARATVRAVAQLTDSPINGEISPSAETYLTTRHNPRGNKWPRGHRPGLPTAR*
Ga0163162_1280736813300013306Switchgrass RhizosphereMYYRIEMSPTGRGFARINFPGRVIALEATQHVGPVWLVGVTDLLGEQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSPIDGEISPSAEAYLSNTP*
Ga0120149_100968633300014058PermafrostGIVALMHYRIEISRPRDGFARLNFPGRVIALEATQHVGPVWLVGVVDTTGDGDGDGDGDGDGSVTVRADNAGDAVWRVAQATVRAFALLTKSPIEDAIKSSPDDYLTNLV*
Ga0163163_1301615713300014325Switchgrass RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHASDAVWRVARATVRAVAQLTDSPIEGEISPSAETLV*
Ga0157379_1224467713300014968Switchgrass RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGEREGSVTVRADHAGDAVWRVARATVRAVAQLTDSSIDGEISPSAEAYLSNTP*
Ga0180075_108940323300015252SoilMHYRIEISQTRKGFARLNFPGRIVELEANQHVGPVWLVGVLDVTGEGEGSVTVRADHAGDAVWRVAQATVRAFAELTESPIEDAFKSSPEDYFTNLS*
Ga0132256_10284652623300015372Arabidopsis RhizosphereMQYRIEMSPARKGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSSIDGEI
Ga0132257_10370896313300015373Arabidopsis RhizosphereMQYRIEMSPARKGFARINFPGRVIALEATQHVGPVWLVGVSDLTGSREGSVTVRADSAGDAVWRVARATVRAVAQLTDDTIEGEIKPTHEDQLGNLP*
Ga0132255_10353029413300015374Arabidopsis RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVAQATVRAVSQLTDSPIDGEIKPSI
Ga0187778_1127958123300017961Tropical PeatlandMPAMQYRIEVSQSRLGYARLNFPGRIIELEATQHVGPVWMVGFLDVSSDAEGSVTVRADGANDAVWRVAQATVRAVSELTNNPIEGEITPTPTIT
Ga0187780_1013974623300017973Tropical PeatlandMPAMQYRIEVSQSRLGYARLNFPGRIIELEATQHVGPVWMVGFLDVSSDAEGSVTVRADGANDAVWRVAQATVRAVSELTNNPIEGEITSTPTIT
Ga0187771_1007081733300018088Tropical PeatlandMHYRIEISPTRNGAARVNFPGRIIALEASRHVGPVWLVSVADEDGRSEGSVTVRAESAGDAVWKVAQATVRAVAELTDNPVEGEIRAGSENSFSNA
Ga0190265_1360495413300018422SoilMRYRIEMSHAGKGIARVNLPGRIIALEATQHVGQVWLVGVVDLTGDGEGAVTVRADNAGDAVWRVARATVRAVAEITDSPIEGDIGEIRDRSDHYV
Ga0190270_1236424923300018469SoilMAILTPAMHYRIEMSQTRKGFARVNFPGRIIALEATQHVGPVWLVGVTDLSGSQEGSVTVRADNPGDAVWRVARATVRAVSELTDDVIDGEIKPNSDDNLGNSP
Ga0193751_100501363300019888SoilMGIVALMYYRIEISQTRNGFARLNFPGRVIALEATQHVGPVWLVGVLDPTSDGEGSVTVRADNAGDAVWRVAQATVRAFALLTNSPIEDAIKSSPDDYLTNLL
Ga0193738_104611923300020020SoilMHYRIEMSQTRKGFARVNFPGRIIALEATQHVGPVWLVGVTDLSGSQEGSVTVRADNAGDAVWRVARATVRAVSELTDDVIDGEIKPNSDDHLGNSP
Ga0206356_1091151013300020070Corn, Switchgrass And Miscanthus RhizosphereEMSPTRRGFARINFPGRIIALEASQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVAQATVRAVAQLTDSPIDGEISPNAETYLSS
Ga0206352_1007818123300020078Corn, Switchgrass And Miscanthus RhizosphereEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSPIDGEISPSAESLI
Ga0210379_1021433123300021081Groundwater SedimentMHYRIEISQTRKGFARLNFPGRVVELEATEHVGPVWLVGVLDATGEGEGAVTVRADNAGDAVWRVAQATVRAFALLTESPIEDAIKSSPNDYLTNLL
Ga0210398_1041117623300021477SoilMRYRIEVSQTRKGIARVDFPGLVVALEATRQVGPIWLVGVRDADRGGRGSVSVYADGPSDAVWRVARATVRAVAELTGNPIEGEISPEPDDPSDNARPGDAQ
Ga0213853_1066100313300021861WatershedsMHYRIEISRTRDGFARLNFPGRVIALEATQHVGPVWLVGVVDTTGGGDGEGSVTVRADNAGDAVWRVAQAAVRAFALLTQSPIEDAIKSSPDDYLTNLV
Ga0242666_101923013300022721SoilRIEVSQTRKGIARVDFPGLVVALEATRQVGPIWLVGVRDADRGGRGSVSVYADGPSDAVWRVARATVRAVAELTGNPIEGEISPEPDDPSDNARPGDAQ
Ga0209640_1051469123300025324SoilMHYRIEISQTRNGFARLNFPGRVIALEATQNVGPVWLVGVVDTTGDGDGSVTVRAASAGDAVWRVAQATVRAFALLTESPIEDAIKPSPDDYLTNLL
Ga0207680_1003878113300025903Switchgrass RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSSIDGEISPSAEAYLSNTP
Ga0207707_1054250123300025912Corn RhizosphereMHYRIEMSPTRRGFARINFPGRIIALEASQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVAQATVRAVAQLTDSPIDGEITPNAETYLSSTP
Ga0207707_1064696423300025912Corn RhizosphereSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSPIDGEISPSAESLI
Ga0207693_1130153813300025915Corn, Switchgrass And Miscanthus RhizosphereMHYRIEISQTRKGFARLNFPGRVVELAANEHVGPVWLVGVLDAAGDAEGSVTVRADNAGDAVWRVAQATVRAFSLLTESPIEDAIKSSPDEYLTNLL
Ga0207662_1065546513300025918Switchgrass RhizosphereMHYRIEMSPTRRGFARINFPGRIIALEATQHVGPVWLVGVTDLTAQHEGSVTVRADHAGDAVWRVAQATVRAVAQLTDSPIDGEITPSAEDYLSKQP
Ga0207652_1175870013300025921Corn RhizosphereMSQTRKGFARVNFPGRIIALEATQHVGPVWLVDVTDLSGEQVGSVTVRADNAGDAVWRVAQATVRAVSQLTGTPIEGEIKPSPDDYLSKSA
Ga0207687_1163433813300025927Miscanthus RhizosphereNFPGRVIALEATQHVGPVWLVGVTDLTGEREGSVTVRADHAGDAVWRVARATVRAVAQLTDSPINGEISPSAETYLSNTP
Ga0207700_1016865823300025928Corn, Switchgrass And Miscanthus RhizosphereLRHRNGYRCAAMHYRIEISQTRKGFARLNFPGRVVELAANEHVGPVWLVGVLDAAGDAEGSVTVRADNAGDAVWRVAQATVRAFSLLTESPIEDAIKSSPDEYLTNLL
Ga0207701_1053752223300025930Corn, Switchgrass And Miscanthus RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSSIDGE
Ga0207644_1078478013300025931Switchgrass RhizosphereARINFPGRVIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVARATVRAVAQLTDSSIDGEISPSAEAYLSNTP
Ga0207674_1029340113300026116Corn RhizosphereMHYRIEMSPTRRGFARINFPGRMIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVAQATVRAVAQLTDSPIDGEI
Ga0207675_10252876823300026118Switchgrass RhizosphereMHYRIEMSPTRRGFARINFPGRMIALEATQHVGPVWLVGVTDLTGQQEGSVTVRADHAGDAVWRVAQATVRAVAQLTDSPIDGEITPNAETYLSSTP
Ga0209736_107555113300027660Forest SoilMHYRIEMSQTRKGFARLEFPGRVVELAATRRVGPVWLVGILDAAGAGEGSVAVRAANAGDAVWRVVQATVRAVAQLTDSPGDDASKPSPDDNLSKLQ
Ga0209167_1043838623300027867Surface SoilMRYRIEVSHTRTGFARVTFPGRIIALEANQHMGPVWLVGVTDLSGDQEGSVTVRADNAGDAVWRVARATVRAVALLTDTPIEGEITPTTEDH
Ga0209579_1021605923300027869Surface SoilMRYRIEVSHTRTGFARVTFPGRIIALEANQHVGPVWMVGVTDLGGEEEGSVTVRADNAGDAVWRVARATVRAVALLTDTPIEGEITPAAEEC
Ga0268266_1132008313300028379Switchgrass RhizosphereMHYRIEMSPTRRGFARINFPGRVIALEATQHVGPVWLVGVTDLTGEREGSVTVRADHAGDAVWRVARATVRAVAQLTDSPINGEISPSAET
Ga0302325_1328874013300031234PalsaMQYRIELSPTRNGHARVDFPGRAVALEARRHAGPHWLVGVSDVSGAGEGSVTVRAENAGDAVWRVAQATVRAVARLTDTPIDGDITPN
Ga0310686_10855019413300031708SoilMMQYRIEISPTNKGAARIDFPGRVLELEAHRHAGAVWLVGVSDPERAAAGSVTVHAESAGDAVWRVAQATVRAVAQLTDSRLDGEITASAPGDA
Ga0307479_1060797213300031962Hardwood Forest SoilMQYRIDISPGRQGYARVDFAGRALAIEVGSHVGPVWLVGVSDLTKPGEGSVTVRAPSANDAVWKVAQAAVRAVAELTGSRLDGDITPSHDDPPTNQP
Ga0326597_1000839963300031965SoilMHYRIEMPHTRKGFARVNFPGRIIALEAAQHVGPVWLVDVTDLTGNQEGAVTVRADNAGDAVWRVARAAVRAVSEMTDSPIDGEIKPSPDGHPYNSP
Ga0326597_1005761723300031965SoilMHYRIEISQTRKGFARLNFPGRVVELEASEHVGPVWLVGVLDATGEGEGAVTVRADNAGDAVWRVAQATVRAFALLTESPIEDAIKPSPDDYLTNLL
Ga0307416_10233586023300032002RhizosphereMQYRIEMSPARNGFARINFPGRIIALEATQHVGPVWLVGVTDLTGNQEGSVTVRADNAGDAVWRVARATVRAVAQLTNDTIEGEIKSNSADHLGNLP
Ga0307470_1137650913300032174Hardwood Forest SoilMQYRIEMSPARKGFARINFPGRVIALEATQHIGPVWLVGVSDLTGSREGSVTVRADSAGDAVWRVARATVRAVAQLTDDTIEGEIKPTHEDQLGNLP
Ga0335079_1076557913300032783SoilMPAMQYRIEVSQSRLGYARLNFPGRIIELEATQHVGPVWMVGFLDVSGDAEGSVTVRADGANDAVWRVAQATVRAVSELTNNPIEGEI
Ga0335081_1052715123300032892SoilMHYRLEISQSRSGFARVNFPGRIIALEATQHVGPVWLVGVLDVTGNREGSVTVRADSGSDAVWRVARATVRAMSELTASPIEDALKPSPDDYLSNIA
Ga0335081_1066150213300032892SoilRDAMPAMQYRIEVSQSRLGYARLNFPGRIIELEATQHVGPVWMVGFLDVSGDAEGSVTVRADGANDAVWRVAQATVRAVSELTNNPIEGEIKPTPTIT
Ga0335081_1077969613300032892SoilMHYRLEISQSRNGFARVNFPGRIIALEATQHVGPVWLVGVLDVTGNREGSVTVRAESPGDAVWRVARATVRAMSELTASPIEDALKPSPDDYLSNIA
Ga0334722_1057327523300033233SedimentMYYRIDISQTRKGVARLTFPGRVVELEASRHAGPVWLVGVLDATGDGEGSVSARADNAGDAVWRVAQATVRAFAPLTDSPIEDAIKPSPDDYLTNLL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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