NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F084289

Metagenome / Metatranscriptome Family F084289

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084289
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 95 residues
Representative Sequence MHTATIRSAQPLGILRDGTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRLLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI
Number of Associated Samples 94
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 59.82 %
% of genes near scaffold ends (potentially truncated) 42.86 %
% of genes from short scaffolds (< 2000 bps) 85.71 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (73.214 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(9.821 % of family members)
Environment Ontology (ENVO) Unclassified
(23.214 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.50%    β-sheet: 0.00%    Coil/Unstructured: 59.50%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF00126HTH_1 22.32
PF07883Cupin_2 18.75
PF03466LysR_substrate 11.61
PF13419HAD_2 9.82
PF12850Metallophos_2 0.89
PF08240ADH_N 0.89
PF02371Transposase_20 0.89
PF08388GIIM 0.89
PF13276HTH_21 0.89
PF03807F420_oxidored 0.89
PF08867FRG 0.89
PF04679DNA_ligase_A_C 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.89
COG3547TransposaseMobilome: prophages, transposons [X] 0.89


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.21 %
UnclassifiedrootN/A26.79 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_120501180All Organisms → cellular organisms → Bacteria1122Open in IMG/M
3300002568|C688J35102_120969508All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3656Open in IMG/M
3300003505|JGIcombinedJ51221_10121758All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1046Open in IMG/M
3300004081|Ga0063454_100772829All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300004114|Ga0062593_103004799Not Available539Open in IMG/M
3300004153|Ga0063455_100245479All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales932Open in IMG/M
3300004153|Ga0063455_101644804All Organisms → cellular organisms → Bacteria → Proteobacteria507Open in IMG/M
3300005093|Ga0062594_102237091All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300005093|Ga0062594_102365981All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300005174|Ga0066680_10943661All Organisms → cellular organisms → Bacteria → Proteobacteria509Open in IMG/M
3300005293|Ga0065715_10633417All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300005363|Ga0008090_15146248All Organisms → cellular organisms → Bacteria → Proteobacteria1175Open in IMG/M
3300005364|Ga0070673_100199457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium1723Open in IMG/M
3300005437|Ga0070710_10067711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2049Open in IMG/M
3300005440|Ga0070705_101638846Not Available542Open in IMG/M
3300005451|Ga0066681_10543604All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria718Open in IMG/M
3300005466|Ga0070685_10416493All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300005471|Ga0070698_100587029Not Available1054Open in IMG/M
3300005471|Ga0070698_101613017Not Available601Open in IMG/M
3300005518|Ga0070699_101040921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales751Open in IMG/M
3300005560|Ga0066670_10259722All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1053Open in IMG/M
3300005560|Ga0066670_10375267All Organisms → cellular organisms → Bacteria → Proteobacteria869Open in IMG/M
3300005564|Ga0070664_100647049All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300005587|Ga0066654_10209656Not Available1016Open in IMG/M
3300005598|Ga0066706_10879251All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales700Open in IMG/M
3300005618|Ga0068864_101207215All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300006028|Ga0070717_10030050All Organisms → cellular organisms → Bacteria → Proteobacteria4364Open in IMG/M
3300006031|Ga0066651_10312287All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales842Open in IMG/M
3300006032|Ga0066696_10695206Not Available654Open in IMG/M
3300006032|Ga0066696_10956634Not Available545Open in IMG/M
3300006050|Ga0075028_100442541All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium750Open in IMG/M
3300006358|Ga0068871_101088504All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300006791|Ga0066653_10497052Not Available618Open in IMG/M
3300006804|Ga0079221_10587747All Organisms → cellular organisms → Bacteria → Proteobacteria747Open in IMG/M
3300006804|Ga0079221_10595481All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia744Open in IMG/M
3300006806|Ga0079220_10540083All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales810Open in IMG/M
3300006806|Ga0079220_10678092All Organisms → cellular organisms → Bacteria → Proteobacteria752Open in IMG/M
3300006806|Ga0079220_11312747All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales607Open in IMG/M
3300006954|Ga0079219_10283868Not Available1012Open in IMG/M
3300009094|Ga0111539_10476107All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1454Open in IMG/M
3300009137|Ga0066709_102737074Not Available656Open in IMG/M
3300009176|Ga0105242_12517601All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300009177|Ga0105248_11560379All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300009553|Ga0105249_11722301All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300009789|Ga0126307_11778419Not Available501Open in IMG/M
3300009840|Ga0126313_11841132Not Available507Open in IMG/M
3300010040|Ga0126308_10358794Not Available967Open in IMG/M
3300010041|Ga0126312_11100453Not Available583Open in IMG/M
3300010042|Ga0126314_10887625Not Available659Open in IMG/M
3300010375|Ga0105239_10425693All Organisms → cellular organisms → Bacteria → Proteobacteria1504Open in IMG/M
3300010379|Ga0136449_100223991All Organisms → cellular organisms → Bacteria → Proteobacteria3534Open in IMG/M
3300012212|Ga0150985_108442598All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300012212|Ga0150985_112877798Not Available708Open in IMG/M
3300012212|Ga0150985_115041491All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1705Open in IMG/M
3300012212|Ga0150985_118468652Not Available562Open in IMG/M
3300012212|Ga0150985_122600360All Organisms → cellular organisms → Bacteria1165Open in IMG/M
3300012469|Ga0150984_104971922All Organisms → cellular organisms → Bacteria → Proteobacteria767Open in IMG/M
3300012469|Ga0150984_112922159All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300012955|Ga0164298_10170014All Organisms → cellular organisms → Bacteria → Proteobacteria1245Open in IMG/M
3300012961|Ga0164302_10264350All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00881101Open in IMG/M
3300012989|Ga0164305_10495930Not Available960Open in IMG/M
3300014488|Ga0182001_10238461Not Available694Open in IMG/M
3300014745|Ga0157377_10701999All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300014745|Ga0157377_11102865All Organisms → cellular organisms → Bacteria → Proteobacteria608Open in IMG/M
3300016357|Ga0182032_10104763All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2005Open in IMG/M
3300016371|Ga0182034_10407888All Organisms → cellular organisms → Bacteria1116Open in IMG/M
3300016445|Ga0182038_11936292All Organisms → cellular organisms → Bacteria → Proteobacteria533Open in IMG/M
3300018001|Ga0187815_10034046All Organisms → cellular organisms → Bacteria → Proteobacteria2157Open in IMG/M
3300018060|Ga0187765_10891316All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300018431|Ga0066655_10211558All Organisms → cellular organisms → Bacteria → Proteobacteria1208Open in IMG/M
3300018465|Ga0190269_11817444All Organisms → cellular organisms → Bacteria → Proteobacteria521Open in IMG/M
3300018468|Ga0066662_10377323All Organisms → cellular organisms → Bacteria → Proteobacteria1234Open in IMG/M
3300018482|Ga0066669_11277957Not Available663Open in IMG/M
3300019883|Ga0193725_1072150All Organisms → cellular organisms → Bacteria → Proteobacteria851Open in IMG/M
3300020070|Ga0206356_10684527Not Available961Open in IMG/M
3300020070|Ga0206356_10695745Not Available521Open in IMG/M
3300020076|Ga0206355_1634623All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300020081|Ga0206354_10158407Not Available722Open in IMG/M
3300020082|Ga0206353_10183264Not Available843Open in IMG/M
3300020580|Ga0210403_11494588Not Available508Open in IMG/M
3300021168|Ga0210406_10050515All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3643Open in IMG/M
3300021180|Ga0210396_10380393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL1991242Open in IMG/M
3300021344|Ga0193719_10029816All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2350Open in IMG/M
3300021401|Ga0210393_10381014Not Available1149Open in IMG/M
3300021420|Ga0210394_10573331Not Available992Open in IMG/M
3300021479|Ga0210410_10170340All Organisms → cellular organisms → Bacteria → Proteobacteria1945Open in IMG/M
3300021559|Ga0210409_10298627All Organisms → cellular organisms → Bacteria → Proteobacteria1452Open in IMG/M
3300022467|Ga0224712_10570216Not Available551Open in IMG/M
3300024284|Ga0247671_1077266All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300025926|Ga0207659_10883634All Organisms → cellular organisms → Bacteria → Proteobacteria768Open in IMG/M
3300025930|Ga0207701_10057130All Organisms → cellular organisms → Bacteria → Proteobacteria3570Open in IMG/M
3300025930|Ga0207701_10108944All Organisms → cellular organisms → Bacteria → Proteobacteria2478Open in IMG/M
3300025941|Ga0207711_11380915All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300025961|Ga0207712_11782184All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300026078|Ga0207702_10239879All Organisms → cellular organisms → Bacteria → Proteobacteria1698Open in IMG/M
3300026095|Ga0207676_11400478All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300026308|Ga0209265_1182007Not Available556Open in IMG/M
3300028047|Ga0209526_10293486All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. L1102Open in IMG/M
3300028145|Ga0247663_1087266Not Available560Open in IMG/M
3300028379|Ga0268266_11815941All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300031058|Ga0308189_10065722All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300031231|Ga0170824_111904105All Organisms → cellular organisms → Bacteria → Proteobacteria955Open in IMG/M
3300031231|Ga0170824_120003626All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1204Open in IMG/M
3300031469|Ga0170819_12398181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1593Open in IMG/M
3300031679|Ga0318561_10461892All Organisms → cellular organisms → Bacteria → Proteobacteria699Open in IMG/M
3300031708|Ga0310686_101155030All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5685Open in IMG/M
3300031753|Ga0307477_10085553All Organisms → cellular organisms → Bacteria → Proteobacteria2188Open in IMG/M
3300031845|Ga0318511_10600378All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300032160|Ga0311301_10179988All Organisms → cellular organisms → Bacteria → Proteobacteria3699Open in IMG/M
3300032180|Ga0307471_100157197All Organisms → cellular organisms → Bacteria → Proteobacteria2199Open in IMG/M
3300032805|Ga0335078_10108975All Organisms → cellular organisms → Bacteria3983Open in IMG/M
3300032892|Ga0335081_10238303All Organisms → cellular organisms → Bacteria → Proteobacteria2470Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.14%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere5.36%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil5.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.36%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.46%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.46%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere4.46%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.68%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.68%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.79%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.79%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.79%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.89%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.89%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.89%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.89%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.89%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020076Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024284Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028145Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_12050118023300002568SoilMHTTTIRSAQSLGIFDDRALSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHSIHNPENRTDWQQGSPVPVALLAMWMPSA*
C688J35102_12096950843300002568SoilMHTTATQSAQSLGILNDRTTSPWGARLRSILSSRWYRMNKEPKHDSLRRIGDRLLADVGLYREHRIHHPQNRTDQQLVS
JGIcombinedJ51221_1012175823300003505Forest SoilMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI*
Ga0063454_10077282923300004081SoilRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRIEQQQGSPVPVALLAIWMPPV*
Ga0062593_10300479923300004114SoilMHTTTVRSAQSLGIFDNRAPSRWRICLRSIPDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA*
Ga0063455_10024547923300004153SoilMHTTATQSAQSLGILNDRTTSPWGARLRSILSSRWYRMNKEPKHDSLRRIGDRLLADVGLYREHRIHHPQNRTDQQLVSPVPGALLAMWMPGI*
Ga0063455_10164480423300004153SoilMHTTTIRSAQSLRILNDKTPSPWRSRFRSILNRSQYRKSEESKHEGVYRLDGRLLAAVGLYREHRTHNPESRTDRQQGSPVPVALLAMWMPS
Ga0062594_10223709113300005093SoilSAQSLGIFDDRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCKHGIHNPENRTDWQQGSPVPVALLAMWMPSA*
Ga0062594_10236598123300005093SoilVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI*
Ga0066680_1094366123300005174SoilMHTAVIRSAQSLGIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSVRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAAL
Ga0065715_1063341723300005293Miscanthus RhizosphereSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI*
Ga0008090_1514624823300005363Tropical Rainforest SoilMQTAAIRPAQPLRILIDRTPSRWSTALRSILSSRWYRKNQESKHDSLRRLDERLLADVGLYREHRINNAKNRSVQRP
Ga0070673_10019945723300005364Switchgrass RhizosphereMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI*
Ga0070710_1006771133300005437Corn, Switchgrass And Miscanthus RhizosphereMQTAAIRPAQPLRILIDRTPSRWSTAPRSILSSRWYRKNQESKHDSLRRLDERLLADVGLYREHRIHNPQNRSVQQPGSPVPVVLLAMWAPI*
Ga0070705_10163884623300005440Corn, Switchgrass And Miscanthus RhizosphereFLEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRSHNPQSRTVQQSGSVIPAALLAMCAPI*
Ga0066681_1054360413300005451SoilMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMWAPI*
Ga0070685_1041649323300005466Switchgrass RhizosphereMHTTTVRSAQSLGIFDDRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCKHGIHNPENRTDWQQGSPVPVALLAMWMPSA*
Ga0070698_10058702913300005471Corn, Switchgrass And Miscanthus RhizosphereLEIAMHATTIRSPQSLAILDDRTPWRSRLRSILSSRWRRKNEEPKHESLYRLDHRLLADVGLYREHRIHNPENRADQQPASPVPVALLAMWAPI*
Ga0070698_10161301713300005471Corn, Switchgrass And Miscanthus RhizosphereMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWHGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI*
Ga0070699_10104092123300005518Corn, Switchgrass And Miscanthus RhizosphereMYHYVGSAVTCLLVVAIYSKEIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI*
Ga0066670_1025972223300005560SoilMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMCAPI*
Ga0066670_1037526713300005560SoilMHTAVIRSAQSLGIVTDRTPSPWRSRLRSILSSRRHRKNEEKDDSLYRLNDRLPADLGLYREHRIDGPQNRNLHQGGSPVPVALLAMWAPI*
Ga0070664_10064704923300005564Corn RhizosphereMHTTTVRSAQSLGIFEYRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA*
Ga0066654_1020965623300005587SoilEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMWAPI*
Ga0066706_1087925123300005598SoilMHTAVIRSAQSLGIISDRTPSRWKARLRSILSSRWRGHNEEPKNNSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAICAPI*
Ga0068864_10120721523300005618Switchgrass RhizosphereMHTTAIRSAQSLGISDEMTPSRWSTRLHSLPARSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA*
Ga0070717_1003005083300006028Corn, Switchgrass And Miscanthus RhizosphereMHTATIRSAQPLGILRDGTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRLLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI*
Ga0066651_1031228723300006031SoilMHTAVIRSAESLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMCAPI*
Ga0066696_1069520623300006032SoilPDLSVYHYVGSAVTCLLEVAMHTAVIRSAQSLGIISDRTPSRWSTRLRSILSSRWRGHKEEPKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMCAPI*
Ga0066696_1095663423300006032SoilMHTAVIRSAQSLGIVTDRMPSPWRSRLRSILSSRRHRKNEEKDDSLYRLNDRLPADLGLYREHRIDGPQNRSVHQGGSPVPVALLAMWAPI*
Ga0075028_10044254123300006050WatershedsMHTAAIRSAQPLGILRDGTPSDWRTRLRSILSSRWYRKNEEPKHASLHRLGDRLLADIGLYREYRIHRPQNRTDQQQVSPVPVALLAMWMPRT*
Ga0068871_10108850413300006358Miscanthus RhizosphereDLQVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI*
Ga0066653_1049705223300006791SoilMHTAVIRSAQSLGIVTDRTPSPWRSRLRSILSSRRHRKNEEKDDSLYRLNDRLPADLGLYREHRIDGPQNRSVHQGGSPVPVALLAMWAPI*
Ga0079221_1058774723300006804Agricultural SoilMHTAVIRSAQSLGVISDRTPSRWNARLRSILSSRWRGHNEEAKSLRRLDNRLLADVGLYREH
Ga0079221_1059548123300006804Agricultural SoilTATFLPEAVMHTTITHSAHSLGTFDSTPSRWSTRFRSLLDRSWFRKNEEVEPDSQYRLDDRLLANVGLYCEHATHNPQNRLDNQRRSPTPVALLAIWMPPV*
Ga0079220_1054008323300006806Agricultural SoilMQTAVIRSAQSLGIDNDRMPSPWSTRLRSNLHSRWFRRNEEAEHDSLYQPEDRLLADVGLYREHGVHHPENRADHRRRSPVPVALLAIWMPPV*
Ga0079220_1067809223300006806Agricultural SoilMAIHLHISMSQKRALPDLSVYHYVGSAATCLLEVAMHTAVIRSAQSLAIITDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDNRLLADVRLYREHRIHNPQSRTVQQSGSAVPAALLAMCAPI*
Ga0079220_1131274723300006806Agricultural SoilMHTTTIRSTHLLGIFANSAPSRRSTRLRSILDRSWFRKNEEAEPDSLHRLDERMLADARLYCEHGLHNPEDRTDWQQGSPVPVALLAMWMPSA*
Ga0079219_1028386823300006954Agricultural SoilMHTAVIRSAQSLAIISDRTPSRWSARLRSILSSRWRGQNEEAKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQLGSAVPGALLAMWAPI*
Ga0111539_1047610723300009094Populus RhizosphereMHMTTVRSAQPLGIFDDRAPSRWRICLRSIPDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNAQNRSDPQRRSPVPVALLAIWMPPV*
Ga0066709_10273707413300009137Grasslands SoilMHTAFVRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRQLDDRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAM
Ga0105242_1251760113300009176Miscanthus RhizosphereRCWVPDLQVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI*
Ga0105248_1156037923300009177Switchgrass RhizosphereMYHYVGSAATCLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI*
Ga0105249_1172230123300009553Switchgrass RhizosphereMHTTTVRSAQSLGIFDDRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA*
Ga0126307_1177841923300009789Serpentine SoilVYHYVGFAATRLLEAAMLTTTIQSPQSLGILDDSTPRRSRLRSILSNCWNRKNEEAAHDLYRLGDRFLADVGLYREHRIHHHQNRADRQPASPVPVALLAMWAPI*
Ga0126313_1184113223300009840Serpentine SoilMHTTTIRSAYSLGIFDDRTPSHWRTRLRSILVGSWFRKNEETAKPDSPYRLDGRLLADVGLYCEHGIHNPQNRTDPQRRSPVPVALLAIWMPPV*
Ga0126308_1035879413300010040Serpentine SoilMLTTTIQSPQSLGILDDSTPWRSRLRSILSNCWNRKNEEAAHDLYRLGDRLLADVGLYREHRIHHHQNRADRQPALPVPVALLAMWAPN*
Ga0126312_1110045313300010041Serpentine SoilMHTTTIRSAQSLGILDDRVPSRWSTRLRSILDRSWSRKNDEAEPDSLYRLDDRLLADVGLYCEHGIHNPQNRTDPQRRSPVPVALLAIWMPPV*
Ga0126314_1088762513300010042Serpentine SoilMHTTTIRSAHSLGIFDDRAPSRWSTRLRSILDRSWSRKNDEAEPDSLYRLDSWLLADVGLYCEHGIHNPQNRSDPQRRSPVPVALLAIWTPLV*
Ga0105239_1042569323300010375Corn RhizosphereLQVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI*
Ga0136449_10022399123300010379Peatlands SoilMHTTTIQSAQSFGVLRDRTPSGWSTRLRSIPSSRWYRKNDKPKHDSLYRLGDRHLADVGLYCEHRIHNPQNRTDQQQVSPLPVALLAMWMPRL*
Ga0150985_10844259813300012212Avena Fatua RhizosphereMHTATIRPAQSLESFNTRTPSRWRSRLRSILSTCLPRNNDESKHDSLNRLGDRLLADVGLYRENRIHHPQNRTDQQRGSPVPVTLLAMWMPRI*
Ga0150985_11287779823300012212Avena Fatua RhizosphereVAVMHTTTIRSAQSLGISDERTLSRWSTRLHSLPGRSWFRKDEEAEPDSLRRLDNRLLADVGLYCEHDIHNPQNRIDRQQGSPVPVALLAIWMPSVQPGACSAQSVVF*
Ga0150985_11504149113300012212Avena Fatua RhizosphereRFLEAAMHTTATQSAQSLGILNDRTTSPWGARLRSILSSRWYRMNKEPKHDSLRRIGDRLLADVGLYREHRIHHPQNRTDQQLVSPVPGALLAMWMPGI*
Ga0150985_11846865223300012212Avena Fatua RhizosphereEAVMHTTTIRSAYSLGIFDDRTPSHWRTRLRSILVGSWFRKNEEAAKPDSQYRLDDRLLADVGLYCEHGIYNPQNRSDPQRRSPVPVALLAIWMPPV*
Ga0150985_12260036013300012212Avena Fatua RhizosphereMYHYLGVTATFLPEAVMHTTTIRSAQSLGIFDDRALSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHSIHNPENRTDWQQGSPVPVALLAMWMPSA*
Ga0150984_10497192223300012469Avena Fatua RhizosphereMYHYVGLTATSRLEAVMHTTTVRSAQSLGIFDDRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHSIHNPENRTDWQQGSPVPVALLAMWMPSA
Ga0150984_11292215923300012469Avena Fatua RhizosphereLEAVMHTTTLRSAHSLGILDDGTPSRWRTCLRSILNRSWFRKNEETEHDSLYRLDGRLLADVGLYCEHGIHNPENRIDRQQGSPVPVALLAIWMPL*
Ga0164298_1017001423300012955SoilVDVSLDWCDSNLFLEAVMHTTTIRSAPSLGMLDDRVPSRWSTRLRSILDRSWSRKNDEAEPDSLYRLDDRLLADVGLYCEHGIHNPQNRSDPQRRSPVPVALLAIWMPPV*
Ga0164302_1026435023300012961SoilMYHYVGVTATFRLEAVMHTTTVHSAQSLGIFDDRAPSRWRICLRSILDRSWFGKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA*
Ga0164305_1049593013300012989SoilLDDRVPSRWSTRLRSILDRSWSRKNDEAEPDSLYRLDDRLLADVGLYCEHGIHNPQNRSDPQRRSPVPVALLAIWMPPV*
Ga0182001_1023846113300014488SoilMYHYLGVTATFLPEAVMHTTTVRSAHSLGTFDSTPSRWSTRFRSLLDRSWFRKNEEVEPDSQYRLDDRLLADVGLYCEHGTHNPQNRIDHQRRSPTPVALLAIWMPPV*
Ga0157377_1070199923300014745Miscanthus RhizosphereMHTTTVRSAQSLGIFDNRAPSRWRICLSSILDRSWFRKNEEAKPDSLDRLDDRMLADVGLYCKHGIHNPENRTDWQQGSPVPVALLAMWMPSA*
Ga0157377_1110286523300014745Miscanthus RhizosphereMHTTTVRSAQSLGIFDDRAPSRWRICLRSILGRSWFRKNEEAEPDSLHRLSDRMLADVGLYCEHDIHNPQNRIDRQKGSPVPVKLLAIWMQSV*
Ga0182032_1010476323300016357SoilMYTTTVRSPQSFGILNDSTPSRWRSRLRSILSSRWHRKKEESKHDSLYRLDDRLLADLGLYREHRIHNPRYRTDQQRGSPVPAAVLAMWMPRI
Ga0182034_1040788823300016371SoilMYTTTVRSPQTFGILNDRTPSRWRSRLRSILSSRWHRKKEESKHDSLYRLDDRLLADLGLYREHRIHNPRYRTDQQRGSPVPAAVLAMWMPRI
Ga0182038_1193629223300016445SoilMYTTTVRSPQSFGILNDRTPSRWRSRLRSILSSRWHRKKEGSKRDSLYRLDDRLLADIGLFREHRIHDPENRADQQRASPVPVALLAI
Ga0187815_1003404623300018001Freshwater SedimentMHSAAIRSAQPLGILRDRTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRLLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI
Ga0187765_1089131613300018060Tropical PeatlandAAMYTTTARTPQSFGILNDSTPSRWRFRLRSILSIRWHRKKEDSKHDNLYRIDDRLLAEPGLYRQHRIRNPRYRTDQQPGSPVPAALLAMWMPGI
Ga0066655_1021155823300018431Grasslands SoilMHTATIRSAQPLGILNERTTSPWRVRLRSILSSRWDRKNQAPKHDSLHRVGDRLLADVKLYRQGRHIIQDPQNRTHQQPGSPVPVALLAMWMPRN
Ga0190269_1181744413300018465SoilMHTTTIRSAHSLGIFDDRAPSRWSTRLRSILDRSWPRKNDEAEPDSLYWLDDRLLADVGLYCEHGIHNPQNRSDPQRRSPVPVALLAIWMPPV
Ga0066662_1037732323300018468Grasslands SoilMHTAVIRSTQSLGIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMWAPI
Ga0066669_1127795723300018482Grasslands SoilMHTAVIRSAQSLGIVTDRTPSPWRSRLRSILSSRRHRKNEEKDDSLYRLNDRLPADLGLYREHRIDGPQNRSVHQGGSPVPVALLAMWAPI
Ga0193725_107215023300019883SoilMHTATIRSAQPLGILRDGTPSRWHTRLRSILSNRWYRKNEEPKHDSLHRLGDRFLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI
Ga0206356_1068452713300020070Corn, Switchgrass And Miscanthus RhizosphereEVAMHTAVIRSAQSLGIVSDRTPSRWSTRLRSILSIRWRGHNEEPKNNSLRRLDNRLLADVGLYHEHRIHNSQSRTVQQSGSPVPAALLAIWAPT
Ga0206356_1069574523300020070Corn, Switchgrass And Miscanthus RhizosphereLWEIAMHTAVIRSAQSLGILNDLTLSRWSTRLRSILSSRWYRNNEQAKHDSLFRFDDRLLADVGVYREHRIHNPHNRTDQQPASPVPVALLAMWARI
Ga0206355_163462323300020076Corn, Switchgrass And Miscanthus RhizosphereLLEVVMHISTIQPVPSFGIPDNRTPWRSRLLSILSGRWYRKNNGSKYNSLYPLGDRLLADVGLYREHRNGDPQNQTDQQQGSPVPVALLAMWMPRI
Ga0206354_1015840723300020081Corn, Switchgrass And Miscanthus RhizosphereLLEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWHGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI
Ga0206353_1018326423300020082Corn, Switchgrass And Miscanthus RhizosphereLSEVAVSSEVNRSAQSLAIISDRTPSRWSTRLRSILSSRWHGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI
Ga0210403_1149458823300020580SoilIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI
Ga0210406_1005051533300021168SoilMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMCAPI
Ga0210396_1038039333300021180SoilITTFGSHCLLEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI
Ga0193719_1002981643300021344SoilMHTATIRSAQPLGILRDGTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRLLADTGLYREHRIRRPHNRTDQQQVSPVPVALLAMWMPRI
Ga0210393_1038101433300021401SoilLEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI
Ga0210394_1057333123300021420SoilWFGSHCLLEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI
Ga0210410_1017034033300021479SoilMHTATIRSAQPLGILRDGTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRLLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRFNEGEGRCWQSLT
Ga0210409_1029862733300021559SoilMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPA
Ga0224712_1057021623300022467Corn, Switchgrass And Miscanthus RhizosphereLLEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWHGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNQQSRTVQQSGSVIPAALLAMCAPI
Ga0247671_107726613300024284SoilTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI
Ga0207659_1088363423300025926Miscanthus RhizosphereLQVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI
Ga0207701_1005713013300025930Corn, Switchgrass And Miscanthus RhizosphereMHTITVRSAQSLGIFDDRAPSRWRICLHSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA
Ga0207701_1010894423300025930Corn, Switchgrass And Miscanthus RhizosphereMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI
Ga0207711_1138091513300025941Switchgrass RhizosphereRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI
Ga0207712_1178218413300025961Switchgrass RhizosphereMHTTTVRSAQSLGIFDDRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA
Ga0207702_1023987923300026078Corn RhizosphereMHTAIIRSAQPLGILRDRTRLRSILSSRWYRKNEEPKHNSRHRLGDRLLADIGLYREHRIHRPHNRTDQQQVSPVPVTLLAMWMPRI
Ga0207676_1140047813300026095Switchgrass RhizosphereMHTTTVRSSQSLGIFNDKAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA
Ga0209265_118200723300026308SoilEVIRSAQSLGIISDRTPSRWSTRLRSILSSRWRGHKEEPKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMWAPI
Ga0209526_1029348613300028047Forest SoilMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSAVPAASAR
Ga0247663_108726613300028145SoilLPFMIHPRIGRCQRCWVPDLQVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI
Ga0268266_1181594113300028379Switchgrass RhizosphereDLQVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI
Ga0308189_1006572213300031058SoilMHTTTVRSAQSHRIFDDRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYREHRIHNPENRADHQPASPVPVALLAMWMPRV
Ga0170824_11190410523300031231Forest SoilMHTTTIQSAQSFGVFRARTPSRWSTRLCSILSSRWYRKNDEPKYDSLYRLGDRLLADVGLYREHRIHGPQNRIAQQQVSPLPFAFLAMWMPRI
Ga0170824_12000362623300031231Forest SoilMHTAVIRSAQSLGIVTDRMPSPWRSRLRSILSSRRHRKNEESKDDSLYRLNDRLLADVGLYREHRIHGPQNRIVHQGGSPVPVALLAMWAPI
Ga0170819_1239818123300031469Forest SoilMHTAVTRSAQSLGIVTDRMPSPWRSRLRSILSSRQHRKNEESKDDSLYRLNDRLLADVGLYREHRIHGPQNRIVHQGGSPVPVALLAMWAPI
Ga0318561_1046189213300031679SoilMYTTTVRSPQTFGILNDRTPSRWRSRLRSILSSRWHRKKEGSKHDTLYRLDDRLLADIGLFREHRIHDPENRADQQRASPVPVALLAIWAPILNS
Ga0310686_10115503043300031708SoilMHTATIRSAQPLGILRDGPPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRLLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI
Ga0307477_1008555323300031753Hardwood Forest SoilMHTATIRSAQPLGILRDGTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDQLLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI
Ga0318511_1060037823300031845SoilQQLFGRRQTFGILNDRTSSRWRSRLRSILSSRWHRKKEESKHDSLYRLDDRLLADLGLYREHRIHNPRYRTDQERGSPVPAVVLAMWMPRI
Ga0311301_1017998833300032160Peatlands SoilMHTTTIQSAQSFGVLRDRTPSGWSTRLRSIPSSRWYRKNDKPKHDSLYRLGDRHLADVGLYCEHRIHNPQNRTDQQQVSPLPVALLAMWMPRL
Ga0307471_10015719723300032180Hardwood Forest SoilMHTATIRSAQPLGILRDGTPSRWRTRLSSILSSRWYRKNEEPKHDSLHRLGDRLLAYIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI
Ga0335078_1010897553300032805SoilMQTAVIRSPQPLAILEDRTPWRSRLRSILSARPYRRNEEPKHESLYRLGDPLLADVGLCREHRIDHTQSRTDQQPVSPLPVALLAMWMPRI
Ga0335081_1023830333300032892SoilMHTATIRSAQPLGILRDGTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRFLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.