Basic Information | |
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Family ID | F084289 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 112 |
Average Sequence Length | 95 residues |
Representative Sequence | MHTATIRSAQPLGILRDGTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRLLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI |
Number of Associated Samples | 94 |
Number of Associated Scaffolds | 112 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 59.82 % |
% of genes near scaffold ends (potentially truncated) | 42.86 % |
% of genes from short scaffolds (< 2000 bps) | 85.71 % |
Associated GOLD sequencing projects | 88 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.19 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (73.214 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.821 % of family members) |
Environment Ontology (ENVO) | Unclassified (23.214 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (50.000 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 40.50% β-sheet: 0.00% Coil/Unstructured: 59.50% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.19 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 112 Family Scaffolds |
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PF00126 | HTH_1 | 22.32 |
PF07883 | Cupin_2 | 18.75 |
PF03466 | LysR_substrate | 11.61 |
PF13419 | HAD_2 | 9.82 |
PF12850 | Metallophos_2 | 0.89 |
PF08240 | ADH_N | 0.89 |
PF02371 | Transposase_20 | 0.89 |
PF08388 | GIIM | 0.89 |
PF13276 | HTH_21 | 0.89 |
PF03807 | F420_oxidored | 0.89 |
PF08867 | FRG | 0.89 |
PF04679 | DNA_ligase_A_C | 0.89 |
COG ID | Name | Functional Category | % Frequency in 112 Family Scaffolds |
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COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 0.89 |
COG3547 | Transposase | Mobilome: prophages, transposons [X] | 0.89 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 73.21 % |
Unclassified | root | N/A | 26.79 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300002568|C688J35102_120501180 | All Organisms → cellular organisms → Bacteria | 1122 | Open in IMG/M |
3300002568|C688J35102_120969508 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 3656 | Open in IMG/M |
3300003505|JGIcombinedJ51221_10121758 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 1046 | Open in IMG/M |
3300004081|Ga0063454_100772829 | All Organisms → cellular organisms → Bacteria | 737 | Open in IMG/M |
3300004114|Ga0062593_103004799 | Not Available | 539 | Open in IMG/M |
3300004153|Ga0063455_100245479 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 932 | Open in IMG/M |
3300004153|Ga0063455_101644804 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 507 | Open in IMG/M |
3300005093|Ga0062594_102237091 | All Organisms → cellular organisms → Bacteria | 592 | Open in IMG/M |
3300005093|Ga0062594_102365981 | All Organisms → cellular organisms → Bacteria | 579 | Open in IMG/M |
3300005174|Ga0066680_10943661 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 509 | Open in IMG/M |
3300005293|Ga0065715_10633417 | All Organisms → cellular organisms → Bacteria | 688 | Open in IMG/M |
3300005363|Ga0008090_15146248 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1175 | Open in IMG/M |
3300005364|Ga0070673_100199457 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium | 1723 | Open in IMG/M |
3300005437|Ga0070710_10067711 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2049 | Open in IMG/M |
3300005440|Ga0070705_101638846 | Not Available | 542 | Open in IMG/M |
3300005451|Ga0066681_10543604 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 718 | Open in IMG/M |
3300005466|Ga0070685_10416493 | All Organisms → cellular organisms → Bacteria | 934 | Open in IMG/M |
3300005471|Ga0070698_100587029 | Not Available | 1054 | Open in IMG/M |
3300005471|Ga0070698_101613017 | Not Available | 601 | Open in IMG/M |
3300005518|Ga0070699_101040921 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 751 | Open in IMG/M |
3300005560|Ga0066670_10259722 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 1053 | Open in IMG/M |
3300005560|Ga0066670_10375267 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 869 | Open in IMG/M |
3300005564|Ga0070664_100647049 | All Organisms → cellular organisms → Bacteria | 982 | Open in IMG/M |
3300005587|Ga0066654_10209656 | Not Available | 1016 | Open in IMG/M |
3300005598|Ga0066706_10879251 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 700 | Open in IMG/M |
3300005618|Ga0068864_101207215 | All Organisms → cellular organisms → Bacteria | 755 | Open in IMG/M |
3300006028|Ga0070717_10030050 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4364 | Open in IMG/M |
3300006031|Ga0066651_10312287 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 842 | Open in IMG/M |
3300006032|Ga0066696_10695206 | Not Available | 654 | Open in IMG/M |
3300006032|Ga0066696_10956634 | Not Available | 545 | Open in IMG/M |
3300006050|Ga0075028_100442541 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium | 750 | Open in IMG/M |
3300006358|Ga0068871_101088504 | All Organisms → cellular organisms → Bacteria | 747 | Open in IMG/M |
3300006791|Ga0066653_10497052 | Not Available | 618 | Open in IMG/M |
3300006804|Ga0079221_10587747 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 747 | Open in IMG/M |
3300006804|Ga0079221_10595481 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 744 | Open in IMG/M |
3300006806|Ga0079220_10540083 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 810 | Open in IMG/M |
3300006806|Ga0079220_10678092 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 752 | Open in IMG/M |
3300006806|Ga0079220_11312747 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 607 | Open in IMG/M |
3300006954|Ga0079219_10283868 | Not Available | 1012 | Open in IMG/M |
3300009094|Ga0111539_10476107 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 1454 | Open in IMG/M |
3300009137|Ga0066709_102737074 | Not Available | 656 | Open in IMG/M |
3300009176|Ga0105242_12517601 | All Organisms → cellular organisms → Bacteria | 563 | Open in IMG/M |
3300009177|Ga0105248_11560379 | All Organisms → cellular organisms → Bacteria | 748 | Open in IMG/M |
3300009553|Ga0105249_11722301 | All Organisms → cellular organisms → Bacteria | 699 | Open in IMG/M |
3300009789|Ga0126307_11778419 | Not Available | 501 | Open in IMG/M |
3300009840|Ga0126313_11841132 | Not Available | 507 | Open in IMG/M |
3300010040|Ga0126308_10358794 | Not Available | 967 | Open in IMG/M |
3300010041|Ga0126312_11100453 | Not Available | 583 | Open in IMG/M |
3300010042|Ga0126314_10887625 | Not Available | 659 | Open in IMG/M |
3300010375|Ga0105239_10425693 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1504 | Open in IMG/M |
3300010379|Ga0136449_100223991 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3534 | Open in IMG/M |
3300012212|Ga0150985_108442598 | All Organisms → cellular organisms → Bacteria | 851 | Open in IMG/M |
3300012212|Ga0150985_112877798 | Not Available | 708 | Open in IMG/M |
3300012212|Ga0150985_115041491 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1705 | Open in IMG/M |
3300012212|Ga0150985_118468652 | Not Available | 562 | Open in IMG/M |
3300012212|Ga0150985_122600360 | All Organisms → cellular organisms → Bacteria | 1165 | Open in IMG/M |
3300012469|Ga0150984_104971922 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 767 | Open in IMG/M |
3300012469|Ga0150984_112922159 | All Organisms → cellular organisms → Bacteria | 694 | Open in IMG/M |
3300012955|Ga0164298_10170014 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1245 | Open in IMG/M |
3300012961|Ga0164302_10264350 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088 | 1101 | Open in IMG/M |
3300012989|Ga0164305_10495930 | Not Available | 960 | Open in IMG/M |
3300014488|Ga0182001_10238461 | Not Available | 694 | Open in IMG/M |
3300014745|Ga0157377_10701999 | All Organisms → cellular organisms → Bacteria | 735 | Open in IMG/M |
3300014745|Ga0157377_11102865 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 608 | Open in IMG/M |
3300016357|Ga0182032_10104763 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 2005 | Open in IMG/M |
3300016371|Ga0182034_10407888 | All Organisms → cellular organisms → Bacteria | 1116 | Open in IMG/M |
3300016445|Ga0182038_11936292 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 533 | Open in IMG/M |
3300018001|Ga0187815_10034046 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2157 | Open in IMG/M |
3300018060|Ga0187765_10891316 | All Organisms → cellular organisms → Bacteria | 601 | Open in IMG/M |
3300018431|Ga0066655_10211558 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1208 | Open in IMG/M |
3300018465|Ga0190269_11817444 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 521 | Open in IMG/M |
3300018468|Ga0066662_10377323 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1234 | Open in IMG/M |
3300018482|Ga0066669_11277957 | Not Available | 663 | Open in IMG/M |
3300019883|Ga0193725_1072150 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 851 | Open in IMG/M |
3300020070|Ga0206356_10684527 | Not Available | 961 | Open in IMG/M |
3300020070|Ga0206356_10695745 | Not Available | 521 | Open in IMG/M |
3300020076|Ga0206355_1634623 | All Organisms → cellular organisms → Bacteria | 603 | Open in IMG/M |
3300020081|Ga0206354_10158407 | Not Available | 722 | Open in IMG/M |
3300020082|Ga0206353_10183264 | Not Available | 843 | Open in IMG/M |
3300020580|Ga0210403_11494588 | Not Available | 508 | Open in IMG/M |
3300021168|Ga0210406_10050515 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 3643 | Open in IMG/M |
3300021180|Ga0210396_10380393 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199 | 1242 | Open in IMG/M |
3300021344|Ga0193719_10029816 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2350 | Open in IMG/M |
3300021401|Ga0210393_10381014 | Not Available | 1149 | Open in IMG/M |
3300021420|Ga0210394_10573331 | Not Available | 992 | Open in IMG/M |
3300021479|Ga0210410_10170340 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1945 | Open in IMG/M |
3300021559|Ga0210409_10298627 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1452 | Open in IMG/M |
3300022467|Ga0224712_10570216 | Not Available | 551 | Open in IMG/M |
3300024284|Ga0247671_1077266 | All Organisms → cellular organisms → Bacteria | 549 | Open in IMG/M |
3300025926|Ga0207659_10883634 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 768 | Open in IMG/M |
3300025930|Ga0207701_10057130 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3570 | Open in IMG/M |
3300025930|Ga0207701_10108944 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2478 | Open in IMG/M |
3300025941|Ga0207711_11380915 | All Organisms → cellular organisms → Bacteria | 647 | Open in IMG/M |
3300025961|Ga0207712_11782184 | All Organisms → cellular organisms → Bacteria | 552 | Open in IMG/M |
3300026078|Ga0207702_10239879 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1698 | Open in IMG/M |
3300026095|Ga0207676_11400478 | All Organisms → cellular organisms → Bacteria | 695 | Open in IMG/M |
3300026308|Ga0209265_1182007 | Not Available | 556 | Open in IMG/M |
3300028047|Ga0209526_10293486 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. L | 1102 | Open in IMG/M |
3300028145|Ga0247663_1087266 | Not Available | 560 | Open in IMG/M |
3300028379|Ga0268266_11815941 | All Organisms → cellular organisms → Bacteria | 584 | Open in IMG/M |
3300031058|Ga0308189_10065722 | All Organisms → cellular organisms → Bacteria | 1057 | Open in IMG/M |
3300031231|Ga0170824_111904105 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 955 | Open in IMG/M |
3300031231|Ga0170824_120003626 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1204 | Open in IMG/M |
3300031469|Ga0170819_12398181 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1593 | Open in IMG/M |
3300031679|Ga0318561_10461892 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 699 | Open in IMG/M |
3300031708|Ga0310686_101155030 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 5685 | Open in IMG/M |
3300031753|Ga0307477_10085553 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2188 | Open in IMG/M |
3300031845|Ga0318511_10600378 | All Organisms → cellular organisms → Bacteria | 513 | Open in IMG/M |
3300032160|Ga0311301_10179988 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3699 | Open in IMG/M |
3300032180|Ga0307471_100157197 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2199 | Open in IMG/M |
3300032805|Ga0335078_10108975 | All Organisms → cellular organisms → Bacteria | 3983 | Open in IMG/M |
3300032892|Ga0335081_10238303 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2470 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 9.82% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 9.82% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 7.14% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 5.36% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 5.36% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.36% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 4.46% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 4.46% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 4.46% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 3.57% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 3.57% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.68% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 2.68% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.68% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 1.79% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 1.79% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.79% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.79% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 1.79% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.79% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.79% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.79% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 1.79% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.89% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.89% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.89% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.89% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.89% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.89% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.89% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.89% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.89% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.89% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.89% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.89% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.89% |
Tropical Rainforest Soil | Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil | 0.89% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
3300003505 | Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924) | Environmental | Open in IMG/M |
3300004081 | Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2) | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004153 | Grasslands soil microbial communities from Hopland, California, USA (version 2) | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005174 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 | Environmental | Open in IMG/M |
3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
3300005363 | Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
3300005451 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 | Environmental | Open in IMG/M |
3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
3300005560 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119 | Environmental | Open in IMG/M |
3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
3300005587 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 | Environmental | Open in IMG/M |
3300005598 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 | Environmental | Open in IMG/M |
3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
3300006031 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100 | Environmental | Open in IMG/M |
3300006032 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 | Environmental | Open in IMG/M |
3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
3300006791 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 | Environmental | Open in IMG/M |
3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
3300010040 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55 | Environmental | Open in IMG/M |
3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
3300010042 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300014488 | Bulk soil microbial communities from Mexico - San Felipe (SF) metaG | Environmental | Open in IMG/M |
3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
3300016357 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 | Environmental | Open in IMG/M |
3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
3300018001 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5 | Environmental | Open in IMG/M |
3300018060 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG | Environmental | Open in IMG/M |
3300018431 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104 | Environmental | Open in IMG/M |
3300018465 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS | Environmental | Open in IMG/M |
3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
3300019883 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2 | Environmental | Open in IMG/M |
3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020076 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) | Environmental | Open in IMG/M |
3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
3300021344 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2 | Environmental | Open in IMG/M |
3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300024284 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12 | Environmental | Open in IMG/M |
3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026308 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes) | Environmental | Open in IMG/M |
3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300028145 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04 | Environmental | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031469 | Fir Spring Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031679 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23 | Environmental | Open in IMG/M |
3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
3300031845 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18 | Environmental | Open in IMG/M |
3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032805 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2 | Environmental | Open in IMG/M |
3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
C688J35102_1205011802 | 3300002568 | Soil | MHTTTIRSAQSLGIFDDRALSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHSIHNPENRTDWQQGSPVPVALLAMWMPSA* |
C688J35102_1209695084 | 3300002568 | Soil | MHTTATQSAQSLGILNDRTTSPWGARLRSILSSRWYRMNKEPKHDSLRRIGDRLLADVGLYREHRIHHPQNRTDQQLVS |
JGIcombinedJ51221_101217582 | 3300003505 | Forest Soil | MHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI* |
Ga0063454_1007728292 | 3300004081 | Soil | RAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRIEQQQGSPVPVALLAIWMPPV* |
Ga0062593_1030047992 | 3300004114 | Soil | MHTTTVRSAQSLGIFDNRAPSRWRICLRSIPDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA* |
Ga0063455_1002454792 | 3300004153 | Soil | MHTTATQSAQSLGILNDRTTSPWGARLRSILSSRWYRMNKEPKHDSLRRIGDRLLADVGLYREHRIHHPQNRTDQQLVSPVPGALLAMWMPGI* |
Ga0063455_1016448042 | 3300004153 | Soil | MHTTTIRSAQSLRILNDKTPSPWRSRFRSILNRSQYRKSEESKHEGVYRLDGRLLAAVGLYREHRTHNPESRTDRQQGSPVPVALLAMWMPS |
Ga0062594_1022370911 | 3300005093 | Soil | SAQSLGIFDDRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCKHGIHNPENRTDWQQGSPVPVALLAMWMPSA* |
Ga0062594_1023659812 | 3300005093 | Soil | VYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI* |
Ga0066680_109436612 | 3300005174 | Soil | MHTAVIRSAQSLGIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSVRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAAL |
Ga0065715_106334172 | 3300005293 | Miscanthus Rhizosphere | SAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI* |
Ga0008090_151462482 | 3300005363 | Tropical Rainforest Soil | MQTAAIRPAQPLRILIDRTPSRWSTALRSILSSRWYRKNQESKHDSLRRLDERLLADVGLYREHRINNAKNRSVQRP |
Ga0070673_1001994572 | 3300005364 | Switchgrass Rhizosphere | MHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI* |
Ga0070710_100677113 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MQTAAIRPAQPLRILIDRTPSRWSTAPRSILSSRWYRKNQESKHDSLRRLDERLLADVGLYREHRIHNPQNRSVQQPGSPVPVVLLAMWAPI* |
Ga0070705_1016388462 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | FLEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRSHNPQSRTVQQSGSVIPAALLAMCAPI* |
Ga0066681_105436041 | 3300005451 | Soil | MHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMWAPI* |
Ga0070685_104164932 | 3300005466 | Switchgrass Rhizosphere | MHTTTVRSAQSLGIFDDRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCKHGIHNPENRTDWQQGSPVPVALLAMWMPSA* |
Ga0070698_1005870291 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | LEIAMHATTIRSPQSLAILDDRTPWRSRLRSILSSRWRRKNEEPKHESLYRLDHRLLADVGLYREHRIHNPENRADQQPASPVPVALLAMWAPI* |
Ga0070698_1016130171 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWHGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI* |
Ga0070699_1010409212 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MYHYVGSAVTCLLVVAIYSKEIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI* |
Ga0066670_102597222 | 3300005560 | Soil | MHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMCAPI* |
Ga0066670_103752671 | 3300005560 | Soil | MHTAVIRSAQSLGIVTDRTPSPWRSRLRSILSSRRHRKNEEKDDSLYRLNDRLPADLGLYREHRIDGPQNRNLHQGGSPVPVALLAMWAPI* |
Ga0070664_1006470492 | 3300005564 | Corn Rhizosphere | MHTTTVRSAQSLGIFEYRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA* |
Ga0066654_102096562 | 3300005587 | Soil | EVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMWAPI* |
Ga0066706_108792512 | 3300005598 | Soil | MHTAVIRSAQSLGIISDRTPSRWKARLRSILSSRWRGHNEEPKNNSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAICAPI* |
Ga0068864_1012072152 | 3300005618 | Switchgrass Rhizosphere | MHTTAIRSAQSLGISDEMTPSRWSTRLHSLPARSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA* |
Ga0070717_100300508 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MHTATIRSAQPLGILRDGTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRLLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI* |
Ga0066651_103122872 | 3300006031 | Soil | MHTAVIRSAESLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMCAPI* |
Ga0066696_106952062 | 3300006032 | Soil | PDLSVYHYVGSAVTCLLEVAMHTAVIRSAQSLGIISDRTPSRWSTRLRSILSSRWRGHKEEPKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMCAPI* |
Ga0066696_109566342 | 3300006032 | Soil | MHTAVIRSAQSLGIVTDRMPSPWRSRLRSILSSRRHRKNEEKDDSLYRLNDRLPADLGLYREHRIDGPQNRSVHQGGSPVPVALLAMWAPI* |
Ga0075028_1004425412 | 3300006050 | Watersheds | MHTAAIRSAQPLGILRDGTPSDWRTRLRSILSSRWYRKNEEPKHASLHRLGDRLLADIGLYREYRIHRPQNRTDQQQVSPVPVALLAMWMPRT* |
Ga0068871_1010885041 | 3300006358 | Miscanthus Rhizosphere | DLQVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI* |
Ga0066653_104970522 | 3300006791 | Soil | MHTAVIRSAQSLGIVTDRTPSPWRSRLRSILSSRRHRKNEEKDDSLYRLNDRLPADLGLYREHRIDGPQNRSVHQGGSPVPVALLAMWAPI* |
Ga0079221_105877472 | 3300006804 | Agricultural Soil | MHTAVIRSAQSLGVISDRTPSRWNARLRSILSSRWRGHNEEAKSLRRLDNRLLADVGLYREH |
Ga0079221_105954812 | 3300006804 | Agricultural Soil | TATFLPEAVMHTTITHSAHSLGTFDSTPSRWSTRFRSLLDRSWFRKNEEVEPDSQYRLDDRLLANVGLYCEHATHNPQNRLDNQRRSPTPVALLAIWMPPV* |
Ga0079220_105400832 | 3300006806 | Agricultural Soil | MQTAVIRSAQSLGIDNDRMPSPWSTRLRSNLHSRWFRRNEEAEHDSLYQPEDRLLADVGLYREHGVHHPENRADHRRRSPVPVALLAIWMPPV* |
Ga0079220_106780922 | 3300006806 | Agricultural Soil | MAIHLHISMSQKRALPDLSVYHYVGSAATCLLEVAMHTAVIRSAQSLAIITDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDNRLLADVRLYREHRIHNPQSRTVQQSGSAVPAALLAMCAPI* |
Ga0079220_113127472 | 3300006806 | Agricultural Soil | MHTTTIRSTHLLGIFANSAPSRRSTRLRSILDRSWFRKNEEAEPDSLHRLDERMLADARLYCEHGLHNPEDRTDWQQGSPVPVALLAMWMPSA* |
Ga0079219_102838682 | 3300006954 | Agricultural Soil | MHTAVIRSAQSLAIISDRTPSRWSARLRSILSSRWRGQNEEAKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQLGSAVPGALLAMWAPI* |
Ga0111539_104761072 | 3300009094 | Populus Rhizosphere | MHMTTVRSAQPLGIFDDRAPSRWRICLRSIPDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNAQNRSDPQRRSPVPVALLAIWMPPV* |
Ga0066709_1027370741 | 3300009137 | Grasslands Soil | MHTAFVRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRQLDDRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAM |
Ga0105242_125176011 | 3300009176 | Miscanthus Rhizosphere | RCWVPDLQVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI* |
Ga0105248_115603792 | 3300009177 | Switchgrass Rhizosphere | MYHYVGSAATCLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI* |
Ga0105249_117223012 | 3300009553 | Switchgrass Rhizosphere | MHTTTVRSAQSLGIFDDRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA* |
Ga0126307_117784192 | 3300009789 | Serpentine Soil | VYHYVGFAATRLLEAAMLTTTIQSPQSLGILDDSTPRRSRLRSILSNCWNRKNEEAAHDLYRLGDRFLADVGLYREHRIHHHQNRADRQPASPVPVALLAMWAPI* |
Ga0126313_118411322 | 3300009840 | Serpentine Soil | MHTTTIRSAYSLGIFDDRTPSHWRTRLRSILVGSWFRKNEETAKPDSPYRLDGRLLADVGLYCEHGIHNPQNRTDPQRRSPVPVALLAIWMPPV* |
Ga0126308_103587941 | 3300010040 | Serpentine Soil | MLTTTIQSPQSLGILDDSTPWRSRLRSILSNCWNRKNEEAAHDLYRLGDRLLADVGLYREHRIHHHQNRADRQPALPVPVALLAMWAPN* |
Ga0126312_111004531 | 3300010041 | Serpentine Soil | MHTTTIRSAQSLGILDDRVPSRWSTRLRSILDRSWSRKNDEAEPDSLYRLDDRLLADVGLYCEHGIHNPQNRTDPQRRSPVPVALLAIWMPPV* |
Ga0126314_108876251 | 3300010042 | Serpentine Soil | MHTTTIRSAHSLGIFDDRAPSRWSTRLRSILDRSWSRKNDEAEPDSLYRLDSWLLADVGLYCEHGIHNPQNRSDPQRRSPVPVALLAIWTPLV* |
Ga0105239_104256932 | 3300010375 | Corn Rhizosphere | LQVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI* |
Ga0136449_1002239912 | 3300010379 | Peatlands Soil | MHTTTIQSAQSFGVLRDRTPSGWSTRLRSIPSSRWYRKNDKPKHDSLYRLGDRHLADVGLYCEHRIHNPQNRTDQQQVSPLPVALLAMWMPRL* |
Ga0150985_1084425981 | 3300012212 | Avena Fatua Rhizosphere | MHTATIRPAQSLESFNTRTPSRWRSRLRSILSTCLPRNNDESKHDSLNRLGDRLLADVGLYRENRIHHPQNRTDQQRGSPVPVTLLAMWMPRI* |
Ga0150985_1128777982 | 3300012212 | Avena Fatua Rhizosphere | VAVMHTTTIRSAQSLGISDERTLSRWSTRLHSLPGRSWFRKDEEAEPDSLRRLDNRLLADVGLYCEHDIHNPQNRIDRQQGSPVPVALLAIWMPSVQPGACSAQSVVF* |
Ga0150985_1150414911 | 3300012212 | Avena Fatua Rhizosphere | RFLEAAMHTTATQSAQSLGILNDRTTSPWGARLRSILSSRWYRMNKEPKHDSLRRIGDRLLADVGLYREHRIHHPQNRTDQQLVSPVPGALLAMWMPGI* |
Ga0150985_1184686522 | 3300012212 | Avena Fatua Rhizosphere | EAVMHTTTIRSAYSLGIFDDRTPSHWRTRLRSILVGSWFRKNEEAAKPDSQYRLDDRLLADVGLYCEHGIYNPQNRSDPQRRSPVPVALLAIWMPPV* |
Ga0150985_1226003601 | 3300012212 | Avena Fatua Rhizosphere | MYHYLGVTATFLPEAVMHTTTIRSAQSLGIFDDRALSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHSIHNPENRTDWQQGSPVPVALLAMWMPSA* |
Ga0150984_1049719222 | 3300012469 | Avena Fatua Rhizosphere | MYHYVGLTATSRLEAVMHTTTVRSAQSLGIFDDRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHSIHNPENRTDWQQGSPVPVALLAMWMPSA |
Ga0150984_1129221592 | 3300012469 | Avena Fatua Rhizosphere | LEAVMHTTTLRSAHSLGILDDGTPSRWRTCLRSILNRSWFRKNEETEHDSLYRLDGRLLADVGLYCEHGIHNPENRIDRQQGSPVPVALLAIWMPL* |
Ga0164298_101700142 | 3300012955 | Soil | VDVSLDWCDSNLFLEAVMHTTTIRSAPSLGMLDDRVPSRWSTRLRSILDRSWSRKNDEAEPDSLYRLDDRLLADVGLYCEHGIHNPQNRSDPQRRSPVPVALLAIWMPPV* |
Ga0164302_102643502 | 3300012961 | Soil | MYHYVGVTATFRLEAVMHTTTVHSAQSLGIFDDRAPSRWRICLRSILDRSWFGKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA* |
Ga0164305_104959301 | 3300012989 | Soil | LDDRVPSRWSTRLRSILDRSWSRKNDEAEPDSLYRLDDRLLADVGLYCEHGIHNPQNRSDPQRRSPVPVALLAIWMPPV* |
Ga0182001_102384611 | 3300014488 | Soil | MYHYLGVTATFLPEAVMHTTTVRSAHSLGTFDSTPSRWSTRFRSLLDRSWFRKNEEVEPDSQYRLDDRLLADVGLYCEHGTHNPQNRIDHQRRSPTPVALLAIWMPPV* |
Ga0157377_107019992 | 3300014745 | Miscanthus Rhizosphere | MHTTTVRSAQSLGIFDNRAPSRWRICLSSILDRSWFRKNEEAKPDSLDRLDDRMLADVGLYCKHGIHNPENRTDWQQGSPVPVALLAMWMPSA* |
Ga0157377_111028652 | 3300014745 | Miscanthus Rhizosphere | MHTTTVRSAQSLGIFDDRAPSRWRICLRSILGRSWFRKNEEAEPDSLHRLSDRMLADVGLYCEHDIHNPQNRIDRQKGSPVPVKLLAIWMQSV* |
Ga0182032_101047632 | 3300016357 | Soil | MYTTTVRSPQSFGILNDSTPSRWRSRLRSILSSRWHRKKEESKHDSLYRLDDRLLADLGLYREHRIHNPRYRTDQQRGSPVPAAVLAMWMPRI |
Ga0182034_104078882 | 3300016371 | Soil | MYTTTVRSPQTFGILNDRTPSRWRSRLRSILSSRWHRKKEESKHDSLYRLDDRLLADLGLYREHRIHNPRYRTDQQRGSPVPAAVLAMWMPRI |
Ga0182038_119362922 | 3300016445 | Soil | MYTTTVRSPQSFGILNDRTPSRWRSRLRSILSSRWHRKKEGSKRDSLYRLDDRLLADIGLFREHRIHDPENRADQQRASPVPVALLAI |
Ga0187815_100340462 | 3300018001 | Freshwater Sediment | MHSAAIRSAQPLGILRDRTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRLLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI |
Ga0187765_108913161 | 3300018060 | Tropical Peatland | AAMYTTTARTPQSFGILNDSTPSRWRFRLRSILSIRWHRKKEDSKHDNLYRIDDRLLAEPGLYRQHRIRNPRYRTDQQPGSPVPAALLAMWMPGI |
Ga0066655_102115582 | 3300018431 | Grasslands Soil | MHTATIRSAQPLGILNERTTSPWRVRLRSILSSRWDRKNQAPKHDSLHRVGDRLLADVKLYRQGRHIIQDPQNRTHQQPGSPVPVALLAMWMPRN |
Ga0190269_118174441 | 3300018465 | Soil | MHTTTIRSAHSLGIFDDRAPSRWSTRLRSILDRSWPRKNDEAEPDSLYWLDDRLLADVGLYCEHGIHNPQNRSDPQRRSPVPVALLAIWMPPV |
Ga0066662_103773232 | 3300018468 | Grasslands Soil | MHTAVIRSTQSLGIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMWAPI |
Ga0066669_112779572 | 3300018482 | Grasslands Soil | MHTAVIRSAQSLGIVTDRTPSPWRSRLRSILSSRRHRKNEEKDDSLYRLNDRLPADLGLYREHRIDGPQNRSVHQGGSPVPVALLAMWAPI |
Ga0193725_10721502 | 3300019883 | Soil | MHTATIRSAQPLGILRDGTPSRWHTRLRSILSNRWYRKNEEPKHDSLHRLGDRFLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI |
Ga0206356_106845271 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | EVAMHTAVIRSAQSLGIVSDRTPSRWSTRLRSILSIRWRGHNEEPKNNSLRRLDNRLLADVGLYHEHRIHNSQSRTVQQSGSPVPAALLAIWAPT |
Ga0206356_106957452 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | LWEIAMHTAVIRSAQSLGILNDLTLSRWSTRLRSILSSRWYRNNEQAKHDSLFRFDDRLLADVGVYREHRIHNPHNRTDQQPASPVPVALLAMWARI |
Ga0206355_16346232 | 3300020076 | Corn, Switchgrass And Miscanthus Rhizosphere | LLEVVMHISTIQPVPSFGIPDNRTPWRSRLLSILSGRWYRKNNGSKYNSLYPLGDRLLADVGLYREHRNGDPQNQTDQQQGSPVPVALLAMWMPRI |
Ga0206354_101584072 | 3300020081 | Corn, Switchgrass And Miscanthus Rhizosphere | LLEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWHGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI |
Ga0206353_101832642 | 3300020082 | Corn, Switchgrass And Miscanthus Rhizosphere | LSEVAVSSEVNRSAQSLAIISDRTPSRWSTRLRSILSSRWHGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI |
Ga0210403_114945882 | 3300020580 | Soil | IISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI |
Ga0210406_100505153 | 3300021168 | Soil | MHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMCAPI |
Ga0210396_103803933 | 3300021180 | Soil | ITTFGSHCLLEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI |
Ga0193719_100298164 | 3300021344 | Soil | MHTATIRSAQPLGILRDGTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRLLADTGLYREHRIRRPHNRTDQQQVSPVPVALLAMWMPRI |
Ga0210393_103810143 | 3300021401 | Soil | LEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI |
Ga0210394_105733312 | 3300021420 | Soil | WFGSHCLLEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPAALLAMCAPI |
Ga0210410_101703403 | 3300021479 | Soil | MHTATIRSAQPLGILRDGTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRLLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRFNEGEGRCWQSLT |
Ga0210409_102986273 | 3300021559 | Soil | MHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSVIPA |
Ga0224712_105702162 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | LLEVAMHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWHGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNQQSRTVQQSGSVIPAALLAMCAPI |
Ga0247671_10772661 | 3300024284 | Soil | TTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI |
Ga0207659_108836342 | 3300025926 | Miscanthus Rhizosphere | LQVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI |
Ga0207701_100571301 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MHTITVRSAQSLGIFDDRAPSRWRICLHSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA |
Ga0207701_101089442 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI |
Ga0207711_113809151 | 3300025941 | Switchgrass Rhizosphere | RLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI |
Ga0207712_117821841 | 3300025961 | Switchgrass Rhizosphere | MHTTTVRSAQSLGIFDDRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA |
Ga0207702_102398792 | 3300026078 | Corn Rhizosphere | MHTAIIRSAQPLGILRDRTRLRSILSSRWYRKNEEPKHNSRHRLGDRLLADIGLYREHRIHRPHNRTDQQQVSPVPVTLLAMWMPRI |
Ga0207676_114004781 | 3300026095 | Switchgrass Rhizosphere | MHTTTVRSSQSLGIFNDKAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYCEHGIHNPENRTDWQQGSPVPVALLAMWMPSA |
Ga0209265_11820072 | 3300026308 | Soil | EVIRSAQSLGIISDRTPSRWSTRLRSILSSRWRGHKEEPKNDSLRRLDNRLLADVGLYREHRIHNPQSRTVQQSGSAVPAALLAMWAPI |
Ga0209526_102934861 | 3300028047 | Forest Soil | MHTAVIRSAQSLAIISDRTPSRWSTRLRSILSSRWRGHNEEPKNDSLRRLDDRLLADVGLYREHRIHNPQSRTVQQSGSAVPAASAR |
Ga0247663_10872661 | 3300028145 | Soil | LPFMIHPRIGRCQRCWVPDLQVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI |
Ga0268266_118159411 | 3300028379 | Switchgrass Rhizosphere | DLQVYHYLDLAATRLLEATMHTTTIRSAQSLGILNDQTPWRPRLRSILSNRWYRKNEEPKHDTLHRLGDRLLTDVGLYREHRIHDPENRTDGQPASPVPVALLAMWMPRI |
Ga0308189_100657221 | 3300031058 | Soil | MHTTTVRSAQSHRIFDDRAPSRWRICLRSILDRSWFRKNEEAKPDSLHRLDDRMLADVGLYREHRIHNPENRADHQPASPVPVALLAMWMPRV |
Ga0170824_1119041052 | 3300031231 | Forest Soil | MHTTTIQSAQSFGVFRARTPSRWSTRLCSILSSRWYRKNDEPKYDSLYRLGDRLLADVGLYREHRIHGPQNRIAQQQVSPLPFAFLAMWMPRI |
Ga0170824_1200036262 | 3300031231 | Forest Soil | MHTAVIRSAQSLGIVTDRMPSPWRSRLRSILSSRRHRKNEESKDDSLYRLNDRLLADVGLYREHRIHGPQNRIVHQGGSPVPVALLAMWAPI |
Ga0170819_123981812 | 3300031469 | Forest Soil | MHTAVTRSAQSLGIVTDRMPSPWRSRLRSILSSRQHRKNEESKDDSLYRLNDRLLADVGLYREHRIHGPQNRIVHQGGSPVPVALLAMWAPI |
Ga0318561_104618921 | 3300031679 | Soil | MYTTTVRSPQTFGILNDRTPSRWRSRLRSILSSRWHRKKEGSKHDTLYRLDDRLLADIGLFREHRIHDPENRADQQRASPVPVALLAIWAPILNS |
Ga0310686_1011550304 | 3300031708 | Soil | MHTATIRSAQPLGILRDGPPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRLLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI |
Ga0307477_100855532 | 3300031753 | Hardwood Forest Soil | MHTATIRSAQPLGILRDGTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDQLLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI |
Ga0318511_106003782 | 3300031845 | Soil | QQLFGRRQTFGILNDRTSSRWRSRLRSILSSRWHRKKEESKHDSLYRLDDRLLADLGLYREHRIHNPRYRTDQERGSPVPAVVLAMWMPRI |
Ga0311301_101799883 | 3300032160 | Peatlands Soil | MHTTTIQSAQSFGVLRDRTPSGWSTRLRSIPSSRWYRKNDKPKHDSLYRLGDRHLADVGLYCEHRIHNPQNRTDQQQVSPLPVALLAMWMPRL |
Ga0307471_1001571972 | 3300032180 | Hardwood Forest Soil | MHTATIRSAQPLGILRDGTPSRWRTRLSSILSSRWYRKNEEPKHDSLHRLGDRLLAYIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI |
Ga0335078_101089755 | 3300032805 | Soil | MQTAVIRSPQPLAILEDRTPWRSRLRSILSARPYRRNEEPKHESLYRLGDPLLADVGLCREHRIDHTQSRTDQQPVSPLPVALLAMWMPRI |
Ga0335081_102383033 | 3300032892 | Soil | MHTATIRSAQPLGILRDGTPSRWRTRLRSILSSRWYRKNEEPKHDSLHRLGDRFLADIGLYREHRIHRPHNRTDQQQVSPVPVALLAMWMPRI |
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