Metagenome / Metatranscriptome Family F084321

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F084321
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	80 residues
Representative Sequence	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR
Number of Associated Samples	70
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.32 %
% of genes near scaffold ends (potentially truncated)	25.89 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (71.429 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.036 % of family members)
Environment Ontology (ENVO)	Unclassified (59.821 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.964 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.93% β-sheet: 10.09% Coil/Unstructured: 77.98%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF04828	GFA	2.68
PF03457	HA	1.79
PF00027	cNMP_binding	1.79
PF13202	EF-hand_5	1.79
PF06411	HdeA	1.79
PF01925	TauE	0.89
PF13405	EF-hand_6	0.89
PF04964	Flp_Fap	0.89
PF00496	SBP_bac_5	0.89
PF04392	ABC_sub_bind	0.89
PF08734	GYD	0.89
PF04851	ResIII	0.89
PF03733	YccF	0.89
PF00331	Glyco_hydro_10	0.89
PF17201	Cache_3-Cache_2	0.89
PF01844	HNH	0.89
PF04606	Ogr_Delta	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.68
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.89
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.89
COG3304	Uncharacterized membrane protein YccF, DUF307 family	Function unknown [S]	0.89
COG3693	Endo-1,4-beta-xylanase, GH35 family	Carbohydrate transport and metabolism [G]	0.89
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.89
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
All Organisms	root	All Organisms	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
cellular organisms	root	All Organisms → cellular organisms	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.29 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.04 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.25 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.89 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.57 %
Methylovirgula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula	0.89 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.57 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.89 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.89 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10133227	Not Available	518	Open in IMG/M
3300005332\|Ga0066388_101079520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1356	Open in IMG/M
3300005363\|Ga0008090_15688781	Not Available	622	Open in IMG/M
3300005764\|Ga0066903_100419745	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300005764\|Ga0066903_100685171	All Organisms → cellular organisms → Bacteria → Proteobacteria	1802	Open in IMG/M
3300005764\|Ga0066903_101556648	Not Available	1251	Open in IMG/M
3300005764\|Ga0066903_103676964	Not Available	825	Open in IMG/M
3300005764\|Ga0066903_104246619	Not Available	766	Open in IMG/M
3300005764\|Ga0066903_105552927	Not Available	664	Open in IMG/M
3300006041\|Ga0075023_100311706	Not Available	652	Open in IMG/M
3300006057\|Ga0075026_100235513	Not Available	977	Open in IMG/M
3300006354\|Ga0075021_10583399	Not Available	713	Open in IMG/M
3300010358\|Ga0126370_10663816	Not Available	910	Open in IMG/M
3300010360\|Ga0126372_11882904	Not Available	643	Open in IMG/M
3300010360\|Ga0126372_12336933	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	585	Open in IMG/M
3300010361\|Ga0126378_11628112	Not Available	733	Open in IMG/M
3300010376\|Ga0126381_100585265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1586	Open in IMG/M
3300010398\|Ga0126383_11289146	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300010398\|Ga0126383_11388141	Not Available	792	Open in IMG/M
3300012948\|Ga0126375_11966565	Not Available	515	Open in IMG/M
3300012971\|Ga0126369_10763437	Not Available	1047	Open in IMG/M
3300012971\|Ga0126369_11435791	Not Available	780	Open in IMG/M
3300012971\|Ga0126369_13013309	Not Available	551	Open in IMG/M
3300016270\|Ga0182036_11055644	Not Available	671	Open in IMG/M
3300016270\|Ga0182036_11360266	Not Available	594	Open in IMG/M
3300016294\|Ga0182041_10114998	Not Available	2008	Open in IMG/M
3300016294\|Ga0182041_12026131	Not Available	536	Open in IMG/M
3300016319\|Ga0182033_10232695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1487	Open in IMG/M
3300016319\|Ga0182033_10974714	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300016341\|Ga0182035_11015880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	735	Open in IMG/M
3300016341\|Ga0182035_11735758	Not Available	564	Open in IMG/M
3300016357\|Ga0182032_10188232	All Organisms → cellular organisms → Bacteria → Proteobacteria	1561	Open in IMG/M
3300016357\|Ga0182032_10241226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1400	Open in IMG/M
3300016357\|Ga0182032_10642843	Not Available	886	Open in IMG/M
3300016357\|Ga0182032_11238388	Not Available	643	Open in IMG/M
3300016371\|Ga0182034_10056867	All Organisms → cellular organisms → Bacteria	2615	Open in IMG/M
3300016371\|Ga0182034_10800209	Not Available	806	Open in IMG/M
3300016371\|Ga0182034_10837752	Not Available	788	Open in IMG/M
3300016404\|Ga0182037_10995755	Not Available	730	Open in IMG/M
3300016445\|Ga0182038_10805064	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300017974\|Ga0187777_10446923	Not Available	898	Open in IMG/M
3300021560\|Ga0126371_10331709	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300021560\|Ga0126371_10831702	Not Available	1069	Open in IMG/M
3300021560\|Ga0126371_11212020	Not Available	891	Open in IMG/M
3300021560\|Ga0126371_13031469	Not Available	569	Open in IMG/M
3300025916\|Ga0207663_10325367	Not Available	1156	Open in IMG/M
3300025916\|Ga0207663_11050674	Not Available	654	Open in IMG/M
3300026823\|Ga0207759_114902	Not Available	609	Open in IMG/M
3300026835\|Ga0207782_103889	Not Available	1414	Open in IMG/M
3300026845\|Ga0207760_104606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1199	Open in IMG/M
3300026847\|Ga0207802_1018888	Not Available	597	Open in IMG/M
3300026860\|Ga0207823_107225	Not Available	814	Open in IMG/M
3300026876\|Ga0207837_1015854	Not Available	635	Open in IMG/M
3300026909\|Ga0207858_1011752	Not Available	862	Open in IMG/M
3300026959\|Ga0207852_1005778	Not Available	1424	Open in IMG/M
3300027014\|Ga0207815_1000762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4914	Open in IMG/M
3300027039\|Ga0207855_1017493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	986	Open in IMG/M
3300027680\|Ga0207826_1008139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2843	Open in IMG/M
3300027680\|Ga0207826_1125047	Not Available	704	Open in IMG/M
3300027874\|Ga0209465_10240216	Not Available	906	Open in IMG/M
3300031446\|Ga0170820_11605178	Not Available	552	Open in IMG/M
3300031545\|Ga0318541_10170451	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300031545\|Ga0318541_10424142	Not Available	744	Open in IMG/M
3300031545\|Ga0318541_10519814	Not Available	666	Open in IMG/M
3300031545\|Ga0318541_10869587	Not Available	503	Open in IMG/M
3300031546\|Ga0318538_10515969	Not Available	648	Open in IMG/M
3300031573\|Ga0310915_10529297	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300031668\|Ga0318542_10371261	Not Available	737	Open in IMG/M
3300031682\|Ga0318560_10520079	Not Available	645	Open in IMG/M
3300031719\|Ga0306917_10138934	Not Available	1791	Open in IMG/M
3300031719\|Ga0306917_10426400	All Organisms → cellular organisms → Bacteria → Proteobacteria	1037	Open in IMG/M
3300031719\|Ga0306917_11327915	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300031724\|Ga0318500_10160486	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300031771\|Ga0318546_10843788	Not Available	645	Open in IMG/M
3300031777\|Ga0318543_10317638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300031782\|Ga0318552_10496869	Not Available	623	Open in IMG/M
3300031794\|Ga0318503_10310112	Not Available	513	Open in IMG/M
3300031796\|Ga0318576_10592812	Not Available	522	Open in IMG/M
3300031833\|Ga0310917_10149599	Not Available	1540	Open in IMG/M
3300031835\|Ga0318517_10399447	Not Available	621	Open in IMG/M
3300031879\|Ga0306919_10275385	Not Available	1272	Open in IMG/M
3300031879\|Ga0306919_10387147	Not Available	1071	Open in IMG/M
3300031879\|Ga0306919_10744581	Not Available	754	Open in IMG/M
3300031879\|Ga0306919_10777166	Not Available	736	Open in IMG/M
3300031880\|Ga0318544_10179009	Not Available	817	Open in IMG/M
3300031890\|Ga0306925_10279124	Not Available	1798	Open in IMG/M
3300031890\|Ga0306925_10404712	Not Available	1462	Open in IMG/M
3300031890\|Ga0306925_10860665	Not Available	936	Open in IMG/M
3300031897\|Ga0318520_10406180	Not Available	833	Open in IMG/M
3300031910\|Ga0306923_10101627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3245	Open in IMG/M
3300031910\|Ga0306923_10469244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1426	Open in IMG/M
3300031910\|Ga0306923_11495080	Not Available	707	Open in IMG/M
3300031912\|Ga0306921_10469820	Not Available	1464	Open in IMG/M
3300031912\|Ga0306921_11005449	Not Available	940	Open in IMG/M
3300031941\|Ga0310912_10209154	Not Available	1493	Open in IMG/M
3300031945\|Ga0310913_10489840	Not Available	873	Open in IMG/M
3300031945\|Ga0310913_10855689	Not Available	640	Open in IMG/M
3300031945\|Ga0310913_11268753	Not Available	511	Open in IMG/M
3300031946\|Ga0310910_10030817	All Organisms → cellular organisms → Bacteria → Proteobacteria	3644	Open in IMG/M
3300031947\|Ga0310909_10265559	Not Available	1435	Open in IMG/M
3300031947\|Ga0310909_10282142	Not Available	1390	Open in IMG/M
3300031947\|Ga0310909_10334916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	1270	Open in IMG/M
3300031954\|Ga0306926_10100121	All Organisms → cellular organisms → Bacteria → Proteobacteria	3552	Open in IMG/M
3300031962\|Ga0307479_10358019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1443	Open in IMG/M
3300032001\|Ga0306922_10314444	Not Available	1681	Open in IMG/M
3300032001\|Ga0306922_10807029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	981	Open in IMG/M
3300032025\|Ga0318507_10139666	Not Available	1031	Open in IMG/M
3300032055\|Ga0318575_10413511	Not Available	685	Open in IMG/M
3300032065\|Ga0318513_10669717	Not Available	508	Open in IMG/M
3300032066\|Ga0318514_10440996	Not Available	692	Open in IMG/M
3300032076\|Ga0306924_10571880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1281	Open in IMG/M
3300032076\|Ga0306924_11037094	Not Available	898	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.32%
Aquatic	Environmental → Aquatic	2.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.32%
Sediment	Environmental → Aquatic → Sediment	2.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.79%
Loam	Environmental → Terrestrial → Soil → Loam	19.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026823	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)	Environmental	Open in IMG/M
3300026835	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 60 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300026860	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 70 (SPAdes)	Environmental	Open in IMG/M
3300026876	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 58 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_101332272	3300000793	Forest Soil	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKSCSTTLVMPERYKIRTQ*
Ga0066388_1010795202	3300005332	Tropical Forest Soil	MSKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLYRPYFYTRWFCCVNKSCRTTLVMPERYKVRANASPAAKLIT*
Ga0008090_156887811	3300005363	Tropical Rainforest Soil	VRKKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMDKSCRTTLVMPERYKVMNPVMLSDD*
Ga0066903_1004197451	3300005764	Tropical Forest Soil	MSKKKRQRDRTLVVPGDGDPCPRCGVPMQIREYSELTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVMLNAD*
Ga0066903_1006851711	3300005764	Tropical Forest Soil	MNKKKRQRYLVRIVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCTNKSCPTTLVIPERYKVMNSAMLGDALENS*
Ga0066903_1015566482	3300005764	Tropical Forest Soil	MNKKKRQRYLFRVVPGDGDPCPRCGVPMQTREYCNLTDTHSRRPYFYTRWFCCMNKSCRTTLVMPERYKIMNPVMLGDA*
Ga0066903_1036769641	3300005764	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMNPVTL
Ga0066903_1042466192	3300005764	Tropical Forest Soil	VRKKERQRYLVRVVPGEGDPCPRCGVPMQIREYNNSTDKHLHRPYFYTRWFCCLDKSCRTTLVMPERYKVMNPVMLSDD*
Ga0066903_1055529272	3300005764	Tropical Forest Soil	MSKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLYRPYFYTRWFCCMNKCCRTTLVMPERYKVRANASPAATLIT*
Ga0075023_1003117061	3300006041	Watersheds	SFRVTGSAMRKKKRQRNRAVVVRGDGDPCPRCGVPMQIREYSNLTDKDLHRPYFYTRWFCCMNKSCRTTMVMPERYKVMNPAMLGDALEKRTT*
Ga0075026_1002355133	3300006057	Watersheds	MRKKKRQRNRAVVVRGDGDPCPRCGVPMQIREYSNLTDKDLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPAMLGDALEKGTT*
Ga0075021_105833992	3300006354	Watersheds	MRKKKRQRNRAVVVRGDGDPCPRCGVPMQIREYSNLTDKDLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPAMLGDALEKGNEIPVASAI*
Ga0126370_106638161	3300010358	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR*
Ga0126372_118829042	3300010360	Tropical Forest Soil	MRKKKRQRYLVRVVPGDGDPCPRCGEPMQIREYSNLTDKHLHRPCFYTRWFCCRNKSCRTTLVMPERYKVMKPVMLGDALENG*
Ga0126372_123369331	3300010360	Tropical Forest Soil	MKRQRRKLIVIPGNGDPCPRCGVPMQIREYDEVTKKKLRQLYFYTRWFCCMNKSCRTTLVMPARYKVMNPAPL*
Ga0126378_116281122	3300010361	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTNKDLHRPYFYTRWFCCTNKSCPTTLVMPKRYKVRANASPAAKLIT*
Ga0126381_1005852653	3300010376	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCWMNKSCRATLVMPRRYKVMNP
Ga0126383_112891461	3300010398	Tropical Forest Soil	MSERMNKKKRQRDRAVVVPGDGDPCPRCGVPMQIREYSELTDKHLHRPYFYTRWFCCMNKSCSTTLVMPERYKIRTQ*
Ga0126383_113881411	3300010398	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCCMNKSCSTTLVMPERYKVRANEKPEGNKPTC*
Ga0126375_119665652	3300012948	Tropical Forest Soil	VEWRNVLSKKKRKRHRAVVVPGDGDPCPRCGVSMQIRKYSDLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPERYKVMNPEMLGDA*
Ga0126369_107634372	3300012971	Tropical Forest Soil	VRKKERQRYLVRVVPGEGDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCWMNKSCRATLVMPRRYKVMNPVILGDALR*
Ga0126369_114357911	3300012971	Tropical Forest Soil	MSKKKRQRYLVRIVPGEGDTCPRCDVPMQIREYSNLTHLHRPYFYTRWFCCMNKCCRTTLVMPERYKVRANASPAAKLIT*
Ga0126369_130133091	3300012971	Tropical Forest Soil	MGDLRANGLGRRVVLNKKKRQHDRAVVVPEDGDPCQRCGVPMQIREYSNSTDKHLHRPYFYTRWFCCLDKSCRTTLVMPERYKVMNPVMLSDDWN*
Ga0182036_110556441	3300016270	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFFCMNKSCRTTLVMPERYKVMNPVILGDALR
Ga0182036_113602661	3300016270	Soil	MRKKKRQRHLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHLHRPYFYTRWFCCMNKSCPTTLVMPERYKVRANEKPEGNKPTR
Ga0182041_101149986	3300016294	Soil	QGASFRSGSAVRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNSTEQHLHRPYFYTRWFCCMDKSCRTTLVMPERYKVINPVMLNDE
Ga0182041_120261311	3300016294	Soil	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTEKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVIEPSDIGRCATLSRGAVASQQSN
Ga0182033_102326952	3300016319	Soil	MRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHPHRPYFYTRWFCCMNKSCPTTLVMPERYKVRANEKPEGNKSTR
Ga0182033_109747141	3300016319	Soil	VRKKKRQRYLVRVVAGEGDPCPRCGVPMQIREYNNLTDKHLHRSYLYTRWFCCMDKSCRTTLVMPERYKVINPVMLSID
Ga0182035_110158802	3300016341	Soil	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTEKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVIEP
Ga0182035_117357581	3300016341	Soil	VRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHWPYFYTRWFCCMNKSCRTTLVMPRRYKVTN
Ga0182032_101882324	3300016357	Soil	VSKKKRQRHLVRVVPGDGDPCPRCGVPMQIREYGDLTDKHLHRPYFYTRWFCCRNKSCRTTLVMPERYKVMN
Ga0182032_102412261	3300016357	Soil	VRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKTCHTTLVMPERYKVRANASPAAKL
Ga0182032_106428432	3300016357	Soil	VRKKKRQRYLVRVVPGESDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCWMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0182032_112383882	3300016357	Soil	VRKKKRQRYLVRIVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0182034_100568673	3300016371	Soil	VSEKKRQRHLVRVVPGDGDPCPRCGVPMQIREYGDLTDKHLHRPYFYTRWFCCRNKSCRTTLVMPERYKVMNPVMLGDALEKGTR
Ga0182034_108002092	3300016371	Soil	MSKKKRQRYLVRIVAGDGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVTLGDALR
Ga0182034_108377522	3300016371	Soil	VRKKKRQRYLVRVVPGEGDPCPRCSVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPERYKVMNPVMLSDD
Ga0182037_109957551	3300016404	Soil	MKRQRRKLIVIPGNGDPCPRCGVPMQIREYDEVTKKKLRQPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVPL
Ga0182038_108050641	3300016445	Soil	MSKKKRQRYLVRIVPGDGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVLMLSDD
Ga0187777_104469231	3300017974	Tropical Peatland	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKNCPTTLVMPKRYKIRNPVMVSDD
Ga0126371_103317092	3300021560	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0126371_108317022	3300021560	Tropical Forest Soil	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCSTTLVMPERYKIRTQ
Ga0126371_112120202	3300021560	Tropical Forest Soil	MRTSKKKRQRYLVRVVPGDGDPCPRCGVPMQIRQYNDLTNKHLHRPHFYTRWFCCMNKSCRTTLVMPERYKVMNPVMLNAD
Ga0126371_130314692	3300021560	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNDLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0207663_103253673	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRKKNASVIGAVVVPGDGDPCPRCGVPMQIREYSNLTDKHSHRPYFYMRWFCCMNKNCRTTLVIPERYKVMNPVMLTDE
Ga0207663_110506741	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	FRVTGSAMRKKKRQRNRAVVVQGDGDPCPRCGVPMQIREYSNLTDKDLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPAMVGDALEKGTA
Ga0207759_1149022	3300026823	Tropical Forest Soil	MVQRAGVDVEKLTKKKRRRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKSCPTTLVMPERYKVRANASPTAKLIT
Ga0207782_1038893	3300026835	Tropical Forest Soil	QRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPRRYKVMNPVILGDALR
Ga0207760_1046062	3300026845	Tropical Forest Soil	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPRRYKVMNPVILGDALR
Ga0207802_10188882	3300026847	Tropical Forest Soil	MVQRAGVDVEKLTKKKRRRYLVRVVPGDGDPCPRCGVPMQIREYNNLTNKDLHRPYFYTRWFCCTNKSCPTTLVMPERYKVRANASPTAKLIT
Ga0207823_1072251	3300026860	Tropical Forest Soil	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIRGYNNLTDKHLHRPYFYTRWFCCMNKNCPTTLVMPKRYKIRNPVMVSDD
Ga0207837_10158541	3300026876	Tropical Forest Soil	MVQRAGVDVEKLTKKKRRRYLVRVVPGDGDPCPRCGVPMQIREYNNLTNKDLHRPYFYTRWFCCTNKSCPTTLVMPERYKVRANASPTAKL
Ga0207858_10117521	3300026909	Tropical Forest Soil	SGSAMRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPRRYKVMNPVILGDALR
Ga0207852_10057783	3300026959	Tropical Forest Soil	MRKKKRQRYLVRVVPGEGDPCPCCGVPMQIREYNLTDKHLHRPYFYTRWFCCTNKSCPTTLVMPERYKVRANASPAAKLIT
Ga0207815_10007624	3300027014	Tropical Forest Soil	MRKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPRRYKVS
Ga0207855_10174932	3300027039	Tropical Forest Soil	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLYRPYFYTRWFCCVNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0207826_10081393	3300027680	Tropical Forest Soil	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLRRPYFYTRWFCCMNKSCPTTLVMPERYKIKSRQEVLRQVLS
Ga0207826_11250472	3300027680	Tropical Forest Soil	MVQRAGVDVEKLTKKKRRRYLVRVVPGDGDPCPRCGVPMQIREYNNLTNKDLHRPYFYTRWFCCTNKSCPTTLVMPERYKVRANASPAAKLIT
Ga0209465_102402161	3300027874	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMTLSRGAVASQQF
Ga0170820_116051781	3300031446	Forest Soil	VVRGDGDPCPRCGVPMQIREYSNLTDKDLHQPYFYTRWFCCMNKSCRTTLVMPERYKVMNPAMLGDAAI
Ga0318541_101704512	3300031545	Soil	VSKKKRQRHLVRVVPGDGDPCPRCGVPMQIREYGDLTDKHLHRPYFYTRWFCCRNKSCRTTLVMPERYKVMNPVMLGDALEKGTR
Ga0318541_104241421	3300031545	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVTLGDALR
Ga0318541_105198141	3300031545	Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCWMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0318541_108695871	3300031545	Soil	SFRSGLAVRKKNRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHWPYFYTRWFCCMNKSCRTTLVMPRRYKVTNPVTLGDALR
Ga0318538_105159691	3300031546	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYNVMNPVILGDALR
Ga0310915_105292971	3300031573	Soil	VSKKKRQRHLVRVVPGDGDPCPRCGVPMQIREYGDLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPERYKVMNPVMLSDD
Ga0318542_103712612	3300031668	Soil	VRKKKRQRYLVRIVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMDPVTLGDALR
Ga0318560_105200792	3300031682	Soil	LIMSEHMKKKMRQRDRAVVVPGDGDPCPRCGMSMQIREYSNSTNQYLRRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVTLGDALR
Ga0306917_101389342	3300031719	Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPERYKVMNPVMLSDD
Ga0306917_104264002	3300031719	Soil	VRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHWPYFYTRWFCCMNKSCRTTLVMPRRYKVTNPVTLGDALR
Ga0306917_113279152	3300031719	Soil	MRNKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHPHRPYFYTRWFCCMNKSCPTTLVMPERYKVRANEKPEGNKPTR
Ga0318500_101604862	3300031724	Soil	MSKKKRQRYLVRVVPGNGDLCPRCGVPMQIREYSNLTDKHLHRPCFYTRWFCCRNKSCRTTLVMPERYKVRANASPAAKLIT
Ga0318546_108437882	3300031771	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVLMLSDD
Ga0318543_103176382	3300031777	Soil	MNKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0318552_104968691	3300031782	Soil	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0318503_103101121	3300031794	Soil	GSCAVLTAIDGEHVSKKKRQRHLVRVVPGDGDPCPRCREPMQIREYSNLTDKHLHRPCFYTRWFCCRNKSCRTTLVMPERYKVRANASPAAKLIT
Ga0318576_105928121	3300031796	Soil	VKKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHWPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0310917_101495991	3300031833	Soil	MSKKKRQRYLVRVVPGDGDPCPRCSVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKTCHTTLVMPERYKVRANALPAAKLIT
Ga0318517_103994472	3300031835	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCVNKSCRTTLVMPQRYKVMNPVTLGDALR
Ga0306919_102753851	3300031879	Soil	MRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHPHRPYFYTRWFCCMNKSCPTTLVMPERYKVRANEKPEGNKPTR
Ga0306919_103871472	3300031879	Soil	VCKKKRQRYLVRVVPGDGDPCPRCSVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKTCHTTLVMPERYKVRANALPAAKLIT
Ga0306919_107445811	3300031879	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVTL
Ga0306919_107771662	3300031879	Soil	MSKKKRQRYLVRVVPGNGDLCPRCGVPMQIREYSNLTDKHLHRSYFYTRWFCCTNKNCRTTLVMPERYKVIN
Ga0318544_101790093	3300031880	Soil	MRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0306925_102791242	3300031890	Soil	VRKKKRQRYLVRVVPGESDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0306925_104047123	3300031890	Soil	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLHRLYFYTRWFCCMNKSCSTTLVMPERYKIRTQ
Ga0306925_108606651	3300031890	Soil	VCKKKRQRYLVRVVPGDGDPCPRCSVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKTCHTTLVMPERYKVRANASPAAKLIT
Ga0318520_104061801	3300031897	Soil	MSKKKRQRYLVRVVPGNGDLCPRCGVPMQIREYSNLTDKHLHRSYFYTRWFCCTNKNCRTTLVMPERYKVMNPVMLNDE
Ga0306923_101016275	3300031910	Soil	MSKKKRQRYLVRIVAGDGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVLMLSDD
Ga0306923_104692442	3300031910	Soil	VRKKKRQRYLVRVVAGEGDPCPRCGVPMQIREYNNLTDKHLHRSYLYTRWFCCMDKSCRTTLVMPERYKVINPVMLSDD
Ga0306923_114950802	3300031910	Soil	MRKKKRQRHLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHPHRPYFYTRWFCCMNKSCPTTLVMPERYKLRANGIGGL
Ga0306921_104698204	3300031912	Soil	RIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYNVMNPVILGDALR
Ga0306921_110054492	3300031912	Soil	DRRVVIPSDGDPCPPCGVPMQIREYAEASKEHLDQPYLYTRWFCCMNKSCRTTLVMPERYKVMNPVPF
Ga0310912_102091543	3300031941	Soil	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDQHLHRLYFYTRWFCCMNKSCSTTLVMPERYKIRTQ
Ga0310913_104898401	3300031945	Soil	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKSCSTTLVMPERYKIRTQ
Ga0310913_108556891	3300031945	Soil	AQGASFRIGSAVRKKKRQRYLVRVVAGEGDPCPRCGVPMQIREYNNLTDKHLHRSYLYTRWFCCMDKSCRTTLVMPERYKVINPVMLSDD
Ga0310913_112687531	3300031945	Soil	MSKKKRQRYLVRVVPGNGDLCPRCGVPMQIHEYSNLTDKHLHRSYFYTSWFCCTNKNCRTTLVMPER
Ga0310910_100308171	3300031946	Soil	VRKKKRQRYLVRIVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0310909_102655591	3300031947	Soil	MSKKKRQRYLVRVVPGNGDLCPRCGVPMQIREYSNLTDKHLHRSYFYTRWFCCTNKNCRTTLVMPERYKVINPVMLNDE
Ga0310909_102821424	3300031947	Soil	VSKKKRQRHLVRVVPGDGDPCPRCGVPMQIREYGDLTDKHLHRPYFYTRWFCCRNKSCRTTLVMPERYKVMNPVM
Ga0310909_103349162	3300031947	Soil	VKKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPERYKVMNPAMLSDD
Ga0306926_101001211	3300031954	Soil	RPDRSGDGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0307479_103580193	3300031962	Hardwood Forest Soil	MRKKKRQRNRAVVVRGDGDPCPRCGVPMQIREYSNSTNQYLRRSYFYTRWFCCLNKSCRTTLVMPERYKVMNSGFSGSSAI
Ga0306922_103144442	3300032001	Soil	QRYLVRVVPGESDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0306922_108070291	3300032001	Soil	TVQNGGEHLRKKKRNRDRRVVIPGDGDPCPRCGVLMQIREYAEASKEHLDPPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVPH
Ga0318507_101396661	3300032025	Soil	VRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHWPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0318575_104135111	3300032055	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVTNPVTLGDALR
Ga0318513_106697171	3300032065	Soil	MSKKKRQRYLVRVVPGNGDLCPRCGVPMQIREYSNLTDKHLHRSYFYTRWFCCTNKNCRTTLVMPERYKVINPVMLNDG
Ga0318514_104409961	3300032066	Soil	VRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVTNPVTLGDALR
Ga0306924_105718802	3300032076	Soil	KKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHPHRPYFYTRWFCCMNKSCPTTLVMPERYKVRANEKPEGNKPTR
Ga0306924_110370941	3300032076	Soil	MSKKKRQRYLVRVVPGDGDPCPRCSVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKTCHTTLVMPERYKVRANASPAAKLIT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084321

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences