Metagenome Family F084379

Basic Information
Family ID	F084379
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	61 residues
Representative Sequence	MLHVSKPELLDAMKDCLHDLENVKLISPDDLDIIDEKRILRHKIAELEREDSDGEIIA
Number of Associated Samples	82
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	47.75 %
% of genes near scaffold ends (potentially truncated)	21.43 %
% of genes from short scaffolds (< 2000 bps)	88.39 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Most Common Taxonomy
Group	Unclassified (72.321 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.536 % of family members)
Environment Ontology (ENVO)	Unclassified (35.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.321 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF07238	PilZ	1.79
PF04586	Peptidase_S78	1.79
PF01738	DLH	1.79
PF08241	Methyltransf_11	0.89
PF13502	AsmA_2	0.89
PF00756	Esterase	0.89
PF00072	Response_reg	0.89
PF09537	DUF2383	0.89
PF13620	CarboxypepD_reg	0.89
PF03631	Virul_fac_BrkB	0.89
PF13432	TPR_16	0.89
PF00884	Sulfatase	0.89
PF13426	PAS_9	0.89
PF01068	DNA_ligase_A_M	0.89
PF05598	DUF772	0.89
PF13472	Lipase_GDSL_2	0.89
PF00578	AhpC-TSA	0.89
PF00561	Abhydrolase_1	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	1.79
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.89
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.89
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.32 %
All Organisms	root	All Organisms	27.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.32 %
cellular organisms	root	All Organisms → cellular organisms	27.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.32 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.32 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.79 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.89 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.89 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.89 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.89 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.89 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.89 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.89 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y02JA3KE	Not Available	529	Open in IMG/M
3300002088\|JGI24811J26625_10088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3694	Open in IMG/M
3300004081\|Ga0063454_101771920	Not Available	539	Open in IMG/M
3300004156\|Ga0062589_101117401	Not Available	747	Open in IMG/M
3300005179\|Ga0066684_10737882	Not Available	656	Open in IMG/M
3300005187\|Ga0066675_11444558	Not Available	503	Open in IMG/M
3300005332\|Ga0066388_100307817	All Organisms → cellular organisms → Bacteria → Acidobacteria	2230	Open in IMG/M
3300005332\|Ga0066388_100947318	Not Available	1432	Open in IMG/M
3300005332\|Ga0066388_102337336	Not Available	968	Open in IMG/M
3300005332\|Ga0066388_105244790	Not Available	657	Open in IMG/M
3300005332\|Ga0066388_105552206	Not Available	639	Open in IMG/M
3300005332\|Ga0066388_105687609	Not Available	631	Open in IMG/M
3300005435\|Ga0070714_100218653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	1750	Open in IMG/M
3300005435\|Ga0070714_102191511	Not Available	538	Open in IMG/M
3300005436\|Ga0070713_101110194	Not Available	764	Open in IMG/M
3300005439\|Ga0070711_100809344	Not Available	795	Open in IMG/M
3300005526\|Ga0073909_10263092	Not Available	771	Open in IMG/M
3300005534\|Ga0070735_10298282	All Organisms → cellular organisms → Bacteria → Acidobacteria	971	Open in IMG/M
3300005537\|Ga0070730_10473947	Not Available	805	Open in IMG/M
3300006028\|Ga0070717_10179527	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300006028\|Ga0070717_10222131	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300006028\|Ga0070717_11871900	Not Available	542	Open in IMG/M
3300006237\|Ga0097621_100777640	Not Available	886	Open in IMG/M
3300006358\|Ga0068871_101340600	Not Available	674	Open in IMG/M
3300006358\|Ga0068871_102402072	Not Available	503	Open in IMG/M
3300006852\|Ga0075433_10650424	Not Available	924	Open in IMG/M
3300006904\|Ga0075424_100334395	Not Available	1613	Open in IMG/M
3300009093\|Ga0105240_11975921	Not Available	606	Open in IMG/M
3300009162\|Ga0075423_10323670	Not Available	1616	Open in IMG/M
3300009792\|Ga0126374_10549088	Not Available	843	Open in IMG/M
3300010043\|Ga0126380_10624315	Not Available	853	Open in IMG/M
3300010043\|Ga0126380_11255354	Not Available	642	Open in IMG/M
3300010043\|Ga0126380_11608139	Not Available	580	Open in IMG/M
3300010046\|Ga0126384_10494668	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300010046\|Ga0126384_10806912	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300010047\|Ga0126382_11434569	Not Available	631	Open in IMG/M
3300010048\|Ga0126373_10574249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178	Open in IMG/M
3300010322\|Ga0134084_10267401	Not Available	623	Open in IMG/M
3300010358\|Ga0126370_10464283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300010358\|Ga0126370_10658763	Not Available	913	Open in IMG/M
3300010359\|Ga0126376_10398402	Not Available	1239	Open in IMG/M
3300010359\|Ga0126376_11916200	Not Available	633	Open in IMG/M
3300010360\|Ga0126372_10284873	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300010362\|Ga0126377_13538517	Not Available	505	Open in IMG/M
3300010366\|Ga0126379_12490735	Not Available	616	Open in IMG/M
3300010371\|Ga0134125_10069731	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	3909	Open in IMG/M
3300010371\|Ga0134125_11056654	Not Available	889	Open in IMG/M
3300010373\|Ga0134128_10389840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1556	Open in IMG/M
3300010376\|Ga0126381_104805948	Not Available	519	Open in IMG/M
3300012198\|Ga0137364_10821919	Not Available	702	Open in IMG/M
3300012199\|Ga0137383_10578045	Not Available	822	Open in IMG/M
3300012201\|Ga0137365_10432844	Not Available	969	Open in IMG/M
3300012201\|Ga0137365_10791803	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300012201\|Ga0137365_10855842	Not Available	664	Open in IMG/M
3300012204\|Ga0137374_10059684	All Organisms → cellular organisms → Bacteria	3843	Open in IMG/M
3300012207\|Ga0137381_11715833	Not Available	518	Open in IMG/M
3300012208\|Ga0137376_10603672	Not Available	949	Open in IMG/M
3300012209\|Ga0137379_10128408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2437	Open in IMG/M
3300012209\|Ga0137379_10509130	Not Available	1112	Open in IMG/M
3300012210\|Ga0137378_11470094	Not Available	593	Open in IMG/M
3300012350\|Ga0137372_10077065	All Organisms → cellular organisms → Bacteria → Acidobacteria	2849	Open in IMG/M
3300012350\|Ga0137372_10159430	Not Available	1836	Open in IMG/M
3300012353\|Ga0137367_10387378	Not Available	992	Open in IMG/M
3300012354\|Ga0137366_10007644	All Organisms → cellular organisms → Bacteria → Acidobacteria	8517	Open in IMG/M
3300012354\|Ga0137366_10012561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6661	Open in IMG/M
3300012357\|Ga0137384_10042020	All Organisms → cellular organisms → Bacteria	3773	Open in IMG/M
3300012357\|Ga0137384_11088184	Not Available	641	Open in IMG/M
3300012469\|Ga0150984_121079240	Not Available	535	Open in IMG/M
3300012532\|Ga0137373_10777219	Not Available	709	Open in IMG/M
3300012917\|Ga0137395_11120488	Not Available	556	Open in IMG/M
3300012924\|Ga0137413_10732222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300012951\|Ga0164300_11055261	Not Available	527	Open in IMG/M
3300012955\|Ga0164298_10216872	Not Available	1131	Open in IMG/M
3300012955\|Ga0164298_10334432	Not Available	952	Open in IMG/M
3300012955\|Ga0164298_10549189	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300012957\|Ga0164303_10173897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
3300012958\|Ga0164299_11102425	Not Available	593	Open in IMG/M
3300012960\|Ga0164301_10623339	Not Available	800	Open in IMG/M
3300012960\|Ga0164301_11755368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	520	Open in IMG/M
3300012961\|Ga0164302_10377622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300012961\|Ga0164302_11070528	Not Available	634	Open in IMG/M
3300012976\|Ga0134076_10497452	Not Available	556	Open in IMG/M
3300012986\|Ga0164304_11502134	Not Available	557	Open in IMG/M
3300013307\|Ga0157372_10396667	Not Available	1608	Open in IMG/M
3300013307\|Ga0157372_11800813	Not Available	704	Open in IMG/M
3300014166\|Ga0134079_10682082	Not Available	522	Open in IMG/M
3300015371\|Ga0132258_10275391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4127	Open in IMG/M
3300015374\|Ga0132255_100058101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5078	Open in IMG/M
3300018482\|Ga0066669_10340753	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300019870\|Ga0193746_1021315	Not Available	675	Open in IMG/M
3300020006\|Ga0193735_1024574	Not Available	1857	Open in IMG/M
3300020010\|Ga0193749_1016217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1456	Open in IMG/M
3300020010\|Ga0193749_1039835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300020018\|Ga0193721_1010800	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300020579\|Ga0210407_11003427	Not Available	636	Open in IMG/M
3300020580\|Ga0210403_10306112	Not Available	1302	Open in IMG/M
3300021170\|Ga0210400_11328602	Not Available	575	Open in IMG/M
3300021344\|Ga0193719_10392687	Not Available	572	Open in IMG/M
3300025916\|Ga0207663_11112714	Not Available	635	Open in IMG/M
3300025928\|Ga0207700_10963643	Not Available	764	Open in IMG/M
3300025929\|Ga0207664_10446193	Not Available	1154	Open in IMG/M
3300027821\|Ga0209811_10265013	Not Available	657	Open in IMG/M
3300031716\|Ga0310813_10957863	Not Available	778	Open in IMG/M
3300031716\|Ga0310813_11038661	Not Available	749	Open in IMG/M
3300031716\|Ga0310813_12360580	Not Available	504	Open in IMG/M
3300031740\|Ga0307468_102469471	Not Available	508	Open in IMG/M
3300031938\|Ga0308175_101130892	Not Available	869	Open in IMG/M
3300031996\|Ga0308176_10864584	Not Available	948	Open in IMG/M
3300032180\|Ga0307471_101889304	Not Available	747	Open in IMG/M
3300032421\|Ga0310812_10349050	Not Available	662	Open in IMG/M
3300033412\|Ga0310810_10810649	Not Available	843	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.39%
Host-Associated	Host-Associated	10.71%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.39%
Plants	Host-Associated → Plants	10.71%
Solid Waste	Engineered → Solid Waste	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.25%
Roots	Host-Associated → Plants → Roots	2.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.79%
Grass	Engineered → Solid Waste → Grass	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.21%
Loam	Environmental → Terrestrial → Soil → Loam	15.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.36%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%
Composting	Engineered → Solid Waste → Grass → Composting	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	63.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300002088	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um emPCR	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_05308300	2170459017	Switchgrass, Maize And Mischanthus Litter	MRDVSKPELLDAMKHCLRDLEDTKLISPGDLDIVDQKHMLRRKIDELEMKISDDPGKAA
JGI24811J26625_100887	3300002088	Soil	MLHVPTPELVHAMKDCLRDLENTKLISPSDLDIIDEKRILRQKIAELENEVSVGQEKAG*
Ga0063454_1017719202	3300004081	Soil	MRHTDKAELLQAMKGCLRDLEDTRLINPDDLDIIDQKRVLRHEIAELEKESADYQLTA*
Ga0062589_1011174011	3300004156	Soil	VRFRILIPGCAMHHVSKLELLDAMKDCLHDLENVKLISPDDLDIIDEKRILRHNIAELEREDSDGHRAA*
Ga0066684_107378821	3300005179	Soil	MRHVLKPELLEALKGRLRDLENAKLISPDDLDIIDQKRILRRKITKLERGGG*
Ga0066675_114445581	3300005187	Soil	MHHILKPELLKTLKAHLRELENVKLISPDDLGIIDQKRVLRRQIAALEKGVSDHYELAG*
Ga0066388_1003078171	3300005332	Tropical Forest Soil	MRHVPKPELVEAMKDCLRDLENTKLISPDDLDIVDEKRILRQKIAELETEDPKANEMVAITTK*
Ga0066388_1009473182	3300005332	Tropical Forest Soil	VGFGISAMGRAKMRHSHEPELLDALKDSLHDLENVKLISPDDLDIIDEKRILRQKIAELERENSDGHMAA*
Ga0066388_1023373362	3300005332	Tropical Forest Soil	MRHFHEPGLLDALKDCLHDLESVKLISPDDLDIIDEKRILRQKIAELEKEREDSGGQMASD*
Ga0066388_1052447901	3300005332	Tropical Forest Soil	MLGILNSGCAMRHVPRPELVEAMKDCLRDLENTKLISPDDLDIIDEKRILRQKIAELGKENSDPHMAA*
Ga0066388_1055522061	3300005332	Tropical Forest Soil	MRFGISRMGRAKMRHSHESGLLNALRDCLHDLESVKLISPDDLDIIDEKRILRQKIAELEREGEREDSGGQMAAD*
Ga0066388_1056876092	3300005332	Tropical Forest Soil	MRHVPKPELLDAMKDCLHDLENVKLLSPEDLDIIDEKRILRQKIAELEEKEEDCGHDMAA
Ga0070714_1002186534	3300005435	Agricultural Soil	MGFGISTVGRAKMRHSNEPELLDALKDSLQDLEGVQLISPEDIEIIAEKRILRQKIEELEREDSDGPMAA*
Ga0070714_1021915111	3300005435	Agricultural Soil	MRHVPKPELVDAMKDCLRNLENTKLISPNDLDIVVEKRILRQKIAELENEDSQKKAA*
Ga0070713_1011101941	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TLGIERGMGFGISTVGRAKMRHSNEPELLDALKDSLQDLEGVQLISPEDIEIIAEKRILRQKIEELEREDSDGPMAA*
Ga0070711_1008093442	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MHHVSKLELLDAMKDCLHDLENVKLISPDDLDIIDEKRILRHNIAELEREDSDGHRAA*
Ga0073909_102630921	3300005526	Surface Soil	MRHVSKPELLAAMKECLHHLENTELISPDDLDIIDAKRILQHKIAELERERTNGHTAA*
Ga0070735_102982821	3300005534	Surface Soil	MRDEPELLDAIKDCLHDLENVELLSPDDLDIIDQKRNLRQTIAQLEREDSDVHKRAA
Ga0070730_104739471	3300005537	Surface Soil	MRHEPELLDAIKDCLHDLENVELLSPDDLDIIDQKRSLRQKIAQLERED
Ga0070717_101795273	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRHFHEPGLLDAMKDCLRDLENVKLLSPDDLDIIDQKRILRQKIAELEREDSDGQMAA*
Ga0070717_102221312	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRHFREPGLLRVMKDCLRDLENVKLISPDDLDIIDEKRILRQKIAELEREDSDDQMVV*
Ga0070717_118719002	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLGIEQSMRFGISMVGRATMRHFHEPGLLHAMKDCLRDLENVKLISPDDLDIIDEKRILRQKIAELE
Ga0097621_1007776401	3300006237	Miscanthus Rhizosphere	MLHVSKPELLDAMKDCLHDLENVKLISPDDLDIIDEKRILRHKIAELEREDSDGEIIA*
Ga0068871_1013406002	3300006358	Miscanthus Rhizosphere	MLHVSKPELLDAMKDCLHDLENVELISPDDLDIIDEKRILRHKIAELEREDDPDGEIII*
Ga0068871_1024020721	3300006358	Miscanthus Rhizosphere	ELLDAMKDCLHDLENVKLISPDDLDIIDEKRILRHNIAELEREDSDGHRAA*
Ga0075433_106504241	3300006852	Populus Rhizosphere	ELLDAMRDCLHDLENVELISPDDLDIIDEKRILRHKIAELEREDSDGEIIA*
Ga0075424_1003343952	3300006904	Populus Rhizosphere	MLHVSKPELLDAMRDCLHDLENVELISPDDLDIIDEKRILRHKIAELEREDSDGEIIA*
Ga0105240_119759212	3300009093	Corn Rhizosphere	MRHEPELLDAIKDCLHDLENVELLSPDDLDIIDQKRSLRQKIAQLEREDSDVHKRAA*
Ga0075423_103236702	3300009162	Populus Rhizosphere	MHHVPNPELMDAMKDCLRDLENTKLISPDDLDIIDEKRILRQKIAQLENEDSDSQQKAG*
Ga0126374_105490882	3300009792	Tropical Forest Soil	MLGILNPGCAMRHVPRPELVEAMKDCLRDLENTKLISPDDLDIIDEKRILRQKIAELERENSDGHLAA*
Ga0126380_106243152	3300010043	Tropical Forest Soil	MRHFHEPGLLDALKDCLHDLESLKLISPDDLDIIDEKRILRQKIAELEREGEREDSGGQMAAD*
Ga0126380_112553541	3300010043	Tropical Forest Soil	HVPRRELVEAVKECLRDLENTKLISPDDLDIIDEKRILRQYIAELERENSDGQTAA*
Ga0126380_116081391	3300010043	Tropical Forest Soil	VRFGISTLGRAKMRHFHQPGLLDAMKDCLRDLESVKLISPDDLDIIDEKRILRQKIAELEKERQAEDSSGQMAAD*
Ga0126384_104946682	3300010046	Tropical Forest Soil	MLGILNSGCAMRHVPRPELVEAMKDCLRDLENTKLISPDDLDIIDEKRILRPKIAELEKENSDPHMAA*
Ga0126384_108069122	3300010046	Tropical Forest Soil	MRHFHEPGLLDALKDCLHDLESTKLISPDDLDIIDEKRILRQKIAELEREDSGGQMAA*
Ga0126382_114345692	3300010047	Tropical Forest Soil	MRFGISTLGRAKMRHFHQPGLLDAMKDCLRDLESVKLISPDDLDIIDEKRILRQKIAELEKEREDSDGQMAA*
Ga0126373_105742492	3300010048	Tropical Forest Soil	MRHVPKPELLDAMKDCLHDLENVKLLSPEDLDIIDEKRILRRKIAELEKEQDSGHDMAA*
Ga0134084_102674012	3300010322	Grasslands Soil	MRHVLKPELLEALKGRLRDLENAKLISPDDLDIIDQKRVLREQIAALEKEDSEGYELAG*
Ga0126370_104642832	3300010358	Tropical Forest Soil	MRFGISRMGRAKMRHSHESGLLDALRDCLHDLESIKLISPDDLDIIDEKRILRQKIAELEREGEREDSGGQMTAD*
Ga0126370_106587632	3300010358	Tropical Forest Soil	MRHVPRAELVEAMKDCLRDLENTKLISPDDLDIIDEKRILRQKIAELEKENSDGHMAA*
Ga0126376_103984021	3300010359	Tropical Forest Soil	MRHVPRPELVEAMKDCLRDLENTKLISPDDLDIIDEKRILRQKIAELEKEDSGGQEMAA*
Ga0126376_119162001	3300010359	Tropical Forest Soil	ILNSGCAMRHVPRPELVEAMKDCLRDLENTKLISPDDLDIIDEKRILRQKIAELERENSDGHLAA*
Ga0126372_102848733	3300010360	Tropical Forest Soil	MLGILNSGCAMRHVPRAELVEAMKDCLRDLENTKLISPDDLDIIDEKRILRQKIAELEKENSDGHMAA*
Ga0126377_135385171	3300010362	Tropical Forest Soil	RQSVRFGISTLGRAKMRHFHQPGLLDAMKDCLRDLESVKLISPDDLDIIDERRILRQKIAELEREDSGSQMAAD*
Ga0126379_124907351	3300010366	Tropical Forest Soil	MRHVPKPEFVAAMKDCLRDLENTKLISPDDLDIIDEKRILRQKIAELEKEDSGGQEMAA*
Ga0134125_100697312	3300010371	Terrestrial Soil	MRNIVLPELLDAMKDCLHDLENVELLSPDDLDIIDQKRSLRQQIDELERAV*
Ga0134125_110566542	3300010371	Terrestrial Soil	MRHIVQPELLAAMKDRLHDLEKVELLSPDDLDIIEQKRRLRQQIAELEERAA*
Ga0134128_103898402	3300010373	Terrestrial Soil	MRDVSKPELLDAMKHCLRDLEDTKLISPGDLDIVDQKHMLRRKIDELEMKISDDPGKAA*
Ga0126381_1048059481	3300010376	Tropical Forest Soil	MRHVPKPEFVAAMKDCLRDLENTKLISPDDLDIIDEKRILRQKIAELERENSDGHMAA*
Ga0137364_108219191	3300012198	Vadose Zone Soil	MRHVPKPELVDAMKDCLRDLEKTKLISPDDLDIIDEKRILRQKIAELETEDSKANEMVAITTK*
Ga0137383_105780451	3300012199	Vadose Zone Soil	MRHFHEPGLLDALKDALRDLENVKLLSPDDLDIIDEKRILRQKIAELEREDSDG
Ga0137365_104328441	3300012201	Vadose Zone Soil	MRHFTEPGLLDAMKDCLRDLENVKLLSPDDLDIIDEKRILRQKIAELEKEDSDGQMAA*
Ga0137365_107918032	3300012201	Vadose Zone Soil	MRHFFEPGLLDAMKDSLRDLENVKLLSPDDLDIIDQKRILRQKIAELEREDSDGQMAA*
Ga0137365_108558422	3300012201	Vadose Zone Soil	MSHVSKPELLDAMKDCLRELETTKLISPDDLDIIDQKRILRQKIAELENEDSDGQEM
Ga0137374_100596842	3300012204	Vadose Zone Soil	MRHVPKPELVDAMKDCLRDLEKTKLISPDDLDIIDEKRILRQKIAELENEDSDGQEKQPD
Ga0137381_117158332	3300012207	Vadose Zone Soil	YKVEELNKNTDAMKNRLDDLENIKLLSPDDLDIIDEKRILRQKIAKMEHEDSDGHEMAA*
Ga0137376_106036721	3300012208	Vadose Zone Soil	MRHVPKPELVNAMKDCLRDLENTKLISPDDLDIIDEKRILRQKIAELENEDSDGQGKAA*
Ga0137379_101284083	3300012209	Vadose Zone Soil	MRHVPKPELVDAMKDCLRDWENTKLISPDDLDIIDEKRILRQKIAELENEDSDGQEKAA*
Ga0137379_105091303	3300012209	Vadose Zone Soil	MRHVSKPELVDAMKDCLRDLESTKLISPDDLDIIDEKRILRQKITELETEDPKANEMVAITTK*
Ga0137378_114700941	3300012210	Vadose Zone Soil	MRHFHEPGLLDALKDALRDLENVKLLSPDDLDIIDEKRILRQKIAELEKEDSDGQMAA*
Ga0137372_100770654	3300012350	Vadose Zone Soil	MRHFTEPGLLDAMKDCLRDLENVKLLSPDDLDIIDEKRILRQKIAELE
Ga0137372_101594304	3300012350	Vadose Zone Soil	MSHVSKPELLDAMKDCLRELETTKLISPDDLDIIDQKRILRQKIAELENEDSDGQEMAA*
Ga0137367_103873782	3300012353	Vadose Zone Soil	MRHFAEPGLLDALKDALRDLENVKLLSPDDLEIIDQKRILRQKIAELEREDSDGQMAA*
Ga0137366_100076442	3300012354	Vadose Zone Soil	MRHVPKPELVDAMKDCLRDLENTKLISPDDLDIVDEKRILRQKIAELENEDSDGQEKAT*
Ga0137366_100125617	3300012354	Vadose Zone Soil	MRHFTEPGLLDAMKDCLRDLENVKLLSPDDLDIIDEKRILRQKIAELEREDSDGQQKAA*
Ga0137384_100420202	3300012357	Vadose Zone Soil	MRHFVEPGRLDAMKDCLRDLESVKLLSPDDLDIVDQKRILRQKIAELEREDSDGRMAA*
Ga0137384_110881841	3300012357	Vadose Zone Soil	RDVQKMRHFFEPGLLDAMKDSLRDLENVKLLSPDDLDIIDQKRILRQKIAELEREDSDGQMAA*
Ga0150984_1210792401	3300012469	Avena Fatua Rhizosphere	MSRVVGPELLDAMKQCLRELEDTNLISPADFDIIDQKRILRQQIATLEKNGSDGCEFAA*
Ga0137373_107772192	3300012532	Vadose Zone Soil	MSHVSKPELLDAMKDCLLELETTKLISPDDLDIIDQKRILRQKIAELENEDSDGQEMAA*
Ga0137395_111204881	3300012917	Vadose Zone Soil	KVEELNKNTDAMKNRLDDLENVKLLSPDDLEIIEEKRILRQKIAKMEHEDSDGHEMAA*
Ga0137413_107322221	3300012924	Vadose Zone Soil	MRHTDKAELLQAMKGCLRDLEDTRLISPDDLDIIDQKRVLRHEIDELEKESADYQLTA*
Ga0164300_110552611	3300012951	Soil	MHHVSKPELLDAMKDCLHDLENVKLISPDDLDIIDEKRILRHNIAELEREDSDGHRAA*
Ga0164298_102168722	3300012955	Soil	MHHVSKLELLDAMKDCLHDLENVKIISQDDLDIIDEKRILRHNIAELEREDSDGHRAA*
Ga0164298_103344322	3300012955	Soil	MRHVSKPELLAAMKECLDHLENTELISQDDLDIIDAKRILRDKIAELERERTNGHMAA*
Ga0164298_105491892	3300012955	Soil	MLQCHEFGLLNAMRDCLRDLENTTLISPDDLAIIDEKRVLRHKIAELEREDSDGRQPDTCS*
Ga0164303_101738971	3300012957	Soil	MRHVSKPELVDAMKECLRDLENAKLISPNDLDIVVERRILRQKIAELENEDSQENAA*
Ga0164299_111024251	3300012958	Soil	MRHVSKPELLAAMKDCLHHLENAELISPDDLDIIDAKRILQHKIAELERERTNGHMAA*
Ga0164301_106233392	3300012960	Soil	MHHVSKLELLDAMKDCLHDLENVKLISPDDLDIIDEKRILRHTIAELEREDSDGTIIA*
Ga0164301_117553682	3300012960	Soil	MHQVSQPELLAAMKDCLHHLENAELISPDDLDIIDAKRILQHKIAELERE
Ga0164302_103776222	3300012961	Soil	MHQVSQPELLAAMKDCLHHLENTELISPDDLDIIDAKRILQHKIAELERERTNGHTAA*
Ga0164302_110705281	3300012961	Soil	MRHVSKPELVDAMKECLRDLENTKLISPNDLDIVVERRILRQKIAELENEDSQENAA*
Ga0134076_104974521	3300012976	Grasslands Soil	MRHFHESGLLDAMKDCLHDLENVELISPDDLDIIDEKRILRQKIAELEREDSDGQEMAA*
Ga0164304_115021341	3300012986	Soil	GCAMRHVSKPELVDAMKECLRDLENTKLISPNDLDIVVERRILRQKIAELENEDSQKKAA
Ga0157372_103966673	3300013307	Corn Rhizosphere	MRHVPKPELVHAMKDCLRDLENTKLISPNDLDIIDETRILRKKIAELENEDSDGQEKAA*
Ga0157372_118008131	3300013307	Corn Rhizosphere	MRHVSKWMLEAMQRRLRDLADTKLISPDDLDIIDQKRILRRKIDELENEDSDGEGKAA*
Ga0134079_106820822	3300014166	Grasslands Soil	MHHILKPELLKTLKAHLRELENVKLISPDDLGIIDQKRVLRRQIAALEKGVSDHY
Ga0132258_102753916	3300015371	Arabidopsis Rhizosphere	MYGHLKTEAAMLHVPAPELVHAMKDCLRDLENTKLISPSDLDIIDEKRILRQKIAELENEVSVGQEKAG*
Ga0132255_1000581015	3300015374	Arabidopsis Rhizosphere	MYGHLKTEAAMLHVPTPELVHAMKDCLRDLENTKLISPSDLDIIDEKRILRQKIAELENEVSVGQEKAG*
Ga0066669_103407531	3300018482	Grasslands Soil	MRRCVEHELLGAMKDCLRDLENVKLLSPDDLDIIDQKRILRQKIAELEKEESDRRMAA
Ga0193746_10213152	3300019870	Soil	MPCVDILKAGCAMRHVPKPELMDAMKGCLCDLENTKLISPDDLDIVDEKRILRQKIAELENEDSNGQQKAG
Ga0193735_10245742	3300020006	Soil	MRHFAEPGLLDALRDCLRDLENVKLLSPDDLDIIDQKRILRQKIAELEREDSDGQTMAA
Ga0193749_10162172	3300020010	Soil	MRHVPKPELMDAMKGCLCDLENTKLISPDDLDIVDEKRILRQKIAELENEDSNGQQKAG
Ga0193749_10398352	3300020010	Soil	MPHPSFRHVHTSELLDAMKDCLHDLENTKLISPDDLDVIDEKRFLRRKIAELQKEETGEESAS
Ga0193721_10108001	3300020018	Soil	MRHVLKPELLEALKGRLRDLENAKLISPDDLDIIDQKRVLREQIAALENEDSEGYELAG
Ga0210407_110034272	3300020579	Soil	MPHLIEPEFLDAMKDCLHDLENVKLLSPDDLDIIDQKRILRQKIAGLEREYSDGHKRAA
Ga0210403_103061121	3300020580	Soil	MPHLIEPEFLDAMKDCLHDLENVKLLSPDDLDIIDQKRILRQKIAELEREYSDGHKRAA
Ga0210400_113286021	3300021170	Soil	TGALASESVDVRNMPHLIEPEFLDAMKDCLHDLENVKLLSPDDLDIIDQKRILRQKIAELEREYSDGHKRAA
Ga0193719_103926872	3300021344	Soil	LASETVGRAKMRNFLEPGLLDAMKECLQDLESVELLSPDDLDIIDQKRILRQKIAELEREDSDGQMAA
Ga0207663_111127142	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MLHVSKPELLDAMKDCLHDLENVKLISPDDLDIIDEKRILRHNIAELEREDSDGHRAA
Ga0207700_109636432	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TLGIERGMGFGISTVGRAKMRHSNEPELLDALKDSLQDLEGVQLISPEDIEIIAEKRILRQKIEELEREDSDGPMAA
Ga0207664_104461931	3300025929	Agricultural Soil	MGFGISTVGRAKMRHSNEPELLDALKDSLQDLEGVQLISPEDIEIIAEKRILRQKIEELEREDSDGPMAA
Ga0209811_102650133	3300027821	Surface Soil	MRHVSKPELLAAMKECLHHLENTELISPDDLDIIDAKRILQHKIAELERERTNGHTAA
Ga0310813_109578633	3300031716	Soil	MLHVSKPELLAALKDCLHRMENTELISPDDLDIINNVKRILRNKIAEL
Ga0310813_110386611	3300031716	Soil	MPHISKPELLEAMQHCLRDLENVNLISPHDLDIIDERRILRQKIAELEHEDSDGYGIAA
Ga0310813_123605801	3300031716	Soil	HHVSKPELLDAMKDCLHDLENVKLISPDDLDIIDEKRILRHTIAELEREDSDGTIIA
Ga0307468_1024694711	3300031740	Hardwood Forest Soil	MRHEPEFLDAIKDCLHDLENVELLSPDDLDIIDQKRSLRQKIAQLEREDSDVHKGAA
Ga0308175_1011308921	3300031938	Soil	MRDVSKPELLDAMKHCLRDLEDTKLISPDDLDIIDQKHMLRRKIDELENEHSDDWRCLRLSQFQ
Ga0308176_108645843	3300031996	Soil	MRDVSKPELLDAMKHCLRDLEDTKLISPDDLDIIDQKHMLRRKIDELENEHSEDPGKPG
Ga0307471_1018893041	3300032180	Hardwood Forest Soil	MRHESELLDAIKVCLHDLENVELLSPDDLDIIDQKRSLRQKIAQLEREDSDVHFCQ
Ga0310812_103490501	3300032421	Soil	MLHVSKPELLAALKDCLHRMENTELISPDDLDIINNVKRILRNKIAELERETTNGHTAA
Ga0310812_103536031	3300032421	Soil	CSGILPAGGAMVEMHVLRTELLEAMKGCLHDLEELKLLTPDDLDIIDERRILRVKIAELEKELHGR
Ga0310810_108106492	3300033412	Soil	MPHISKPELLEAMQHCLRDLENVNLISPHDLDIIDERRILRQKIAELEHEDSDGDGIAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084379

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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