Metagenome Family F084465

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F084465
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	70 residues
Representative Sequence	MKKSSRLTGLVLTLIGALVLLNNLGKPRVEALHGPDVLGLVASGMLLGIGFFGLMGRLNFASSTKDQS
Number of Associated Samples	102
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.54 %
% of genes near scaffold ends (potentially truncated)	25.89 %
% of genes from short scaffolds (< 2000 bps)	88.39 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (62.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.821 % of family members)
Environment Ontology (ENVO)	Unclassified (30.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.964 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 61.46% β-sheet: 0.00% Coil/Unstructured: 38.54%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00239	Resolvase	2.68
PF07335	Glyco_hydro_75	2.68
PF01381	HTH_3	1.79
PF01964	ThiC_Rad_SAM	0.89
PF00294	PfkB	0.89
PF12695	Abhydrolase_5	0.89
PF02652	Lactate_perm	0.89
PF03572	Peptidase_S41	0.89
PF13586	DDE_Tnp_1_2	0.89
PF12796	Ank_2	0.89
PF15738	YafQ_toxin	0.89
PF00764	Arginosuc_synth	0.89
PF13620	CarboxypepD_reg	0.89
PF01609	DDE_Tnp_1	0.89
PF13360	PQQ_2	0.89
PF01850	PIN	0.89
PF07969	Amidohydro_3	0.89
PF01758	SBF	0.89
PF07589	PEP-CTERM	0.89
PF06964	Alpha-L-AF_C	0.89
PF01799	Fer2_2	0.89
PF13683	rve_3	0.89
PF00069	Pkinase	0.89
PF12893	Lumazine_bd_2	0.89
PF01648	ACPS	0.89
PF03400	DDE_Tnp_IS1	0.89
PF13577	SnoaL_4	0.89
PF07517	SecA_DEAD	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.57
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.68
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.68
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.89
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	0.89
COG0653	Preprotein translocase subunit SecA (ATPase, RNA helicase)	Intracellular trafficking, secretion, and vesicular transport [U]	0.89
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG1620	L-lactate permease	Energy production and conversion [C]	0.89
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.89
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.89
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.89
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.89
COG3534	Alpha-L-arabinofuranosidase	Carbohydrate transport and metabolism [G]	0.89
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.89
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.89
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
All Organisms	root	All Organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
cellular organisms	root	All Organisms → cellular organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.14 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.79 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.14 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.68 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.79 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	1.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.68 %
Chlorobia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia	1.79 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.14 %
Chlorobiales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales	1.79 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.89 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.89 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.14 %
Chlorobiaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae	1.79 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.89 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.89 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.89 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.14 %
Chlorobium/Pelodictyon group	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group	1.79 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.89 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.89 %
Granulicella sp. S156	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S156	0.89 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.14 %
Chlorobium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium	1.79 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.89 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.89 %
Granulicella sp. S156	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S156	0.89 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.14 %
unclassified Chlorobium	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → unclassified Chlorobium	1.79 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.89 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.89 %
Granulicella sp. S156	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S156	0.89 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.14 %
Chlorobium sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → unclassified Chlorobium → Chlorobium sp.	1.79 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.89 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.89 %
Granulicella sp. S156	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S156	0.89 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_102592291	Not Available	508	Open in IMG/M
3300005177\|Ga0066690_11039829	Not Available	512	Open in IMG/M
3300005328\|Ga0070676_11210166	Not Available	574	Open in IMG/M
3300005328\|Ga0070676_11253437	Not Available	565	Open in IMG/M
3300005330\|Ga0070690_101463739	Not Available	551	Open in IMG/M
3300005331\|Ga0070670_101454264	Not Available	629	Open in IMG/M
3300005332\|Ga0066388_104098829	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005336\|Ga0070680_100140038	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → unclassified Chlorobium → Chlorobium sp.	2028	Open in IMG/M
3300005338\|Ga0068868_101049543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300005339\|Ga0070660_100183699	Not Available	1693	Open in IMG/M
3300005344\|Ga0070661_100922174	Not Available	722	Open in IMG/M
3300005365\|Ga0070688_100715609	Not Available	777	Open in IMG/M
3300005438\|Ga0070701_10480310	Not Available	803	Open in IMG/M
3300005441\|Ga0070700_101881320	Not Available	517	Open in IMG/M
3300005456\|Ga0070678_101151570	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300005546\|Ga0070696_101507423	Not Available	576	Open in IMG/M
3300005549\|Ga0070704_100436810	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300005617\|Ga0068859_101964739	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300005993\|Ga0080027_10268066	Not Available	676	Open in IMG/M
3300005994\|Ga0066789_10509046	Not Available	503	Open in IMG/M
3300006042\|Ga0075368_10007607	All Organisms → cellular organisms → Bacteria	3825	Open in IMG/M
3300006047\|Ga0075024_100592644	Not Available	595	Open in IMG/M
3300006050\|Ga0075028_100830597	Not Available	565	Open in IMG/M
3300006052\|Ga0075029_100000473	All Organisms → cellular organisms → Bacteria	23025	Open in IMG/M
3300006178\|Ga0075367_10081509	Not Available	1958	Open in IMG/M
3300006237\|Ga0097621_100715205	Not Available	923	Open in IMG/M
3300006353\|Ga0075370_10819030	Not Available	568	Open in IMG/M
3300006893\|Ga0073928_10756894	Not Available	674	Open in IMG/M
3300009101\|Ga0105247_11345176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300009177\|Ga0105248_10016520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8126	Open in IMG/M
3300009551\|Ga0105238_12356934	Not Available	568	Open in IMG/M
3300010343\|Ga0074044_10830985	Not Available	603	Open in IMG/M
3300010362\|Ga0126377_13232775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300010366\|Ga0126379_11647470	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300010379\|Ga0136449_100987730	Not Available	1357	Open in IMG/M
3300010379\|Ga0136449_101613267	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300010399\|Ga0134127_13052351	Not Available	546	Open in IMG/M
3300010400\|Ga0134122_11221979	Not Available	754	Open in IMG/M
3300010401\|Ga0134121_12586558	Not Available	551	Open in IMG/M
3300010401\|Ga0134121_13142312	Not Available	510	Open in IMG/M
3300010403\|Ga0134123_11149780	Not Available	803	Open in IMG/M
3300012189\|Ga0137388_11307685	Not Available	664	Open in IMG/M
3300012206\|Ga0137380_11412776	Not Available	581	Open in IMG/M
3300012212\|Ga0150985_111487519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300012351\|Ga0137386_11136240	Not Available	550	Open in IMG/M
3300012469\|Ga0150984_114427199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1101	Open in IMG/M
3300012680\|Ga0136612_10624907	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300012925\|Ga0137419_11576726	Not Available	558	Open in IMG/M
3300012951\|Ga0164300_10259663	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300012957\|Ga0164303_11492091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300012957\|Ga0164303_11507324	Not Available	508	Open in IMG/M
3300012958\|Ga0164299_10562396	Not Available	772	Open in IMG/M
3300012958\|Ga0164299_10856358	Not Available	654	Open in IMG/M
3300012960\|Ga0164301_11702234	Not Available	527	Open in IMG/M
3300012971\|Ga0126369_12862462	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012984\|Ga0164309_11201103	Not Available	636	Open in IMG/M
3300012986\|Ga0164304_10277070	Not Available	1138	Open in IMG/M
3300012989\|Ga0164305_12211490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	506	Open in IMG/M
3300013100\|Ga0157373_10383065	Not Available	1006	Open in IMG/M
3300013104\|Ga0157370_10010929	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9532	Open in IMG/M
3300013296\|Ga0157374_11344101	Not Available	737	Open in IMG/M
3300013296\|Ga0157374_11783133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300013306\|Ga0163162_12650536	Not Available	577	Open in IMG/M
3300014169\|Ga0181531_10320962	Not Available	948	Open in IMG/M
3300014200\|Ga0181526_10381818	Not Available	895	Open in IMG/M
3300014200\|Ga0181526_10924126	Not Available	549	Open in IMG/M
3300014325\|Ga0163163_13185987	Not Available	512	Open in IMG/M
3300014491\|Ga0182014_10064243	All Organisms → cellular organisms → Bacteria	2410	Open in IMG/M
3300014495\|Ga0182015_10055723	All Organisms → cellular organisms → Bacteria	2866	Open in IMG/M
3300014499\|Ga0182012_10069097	All Organisms → cellular organisms → Bacteria	2756	Open in IMG/M
3300014655\|Ga0181516_10744371	Not Available	509	Open in IMG/M
3300014968\|Ga0157379_10293681	Not Available	1480	Open in IMG/M
3300014968\|Ga0157379_11491307	Not Available	658	Open in IMG/M
3300015371\|Ga0132258_11490409	Not Available	1709	Open in IMG/M
3300016357\|Ga0182032_11686208	Not Available	552	Open in IMG/M
3300018035\|Ga0187875_10155605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1277	Open in IMG/M
3300018037\|Ga0187883_10722449	Not Available	520	Open in IMG/M
3300018047\|Ga0187859_10198973	All Organisms → cellular organisms → Bacteria → Acidobacteria	1069	Open in IMG/M
3300018057\|Ga0187858_10119362	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300018067\|Ga0184611_1056483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1316	Open in IMG/M
3300018088\|Ga0187771_10100462	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2330	Open in IMG/M
3300019362\|Ga0173479_10388629	Not Available	669	Open in IMG/M
3300019787\|Ga0182031_1116022	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300025904\|Ga0207647_10715323	Not Available	545	Open in IMG/M
3300025908\|Ga0207643_10617105	Not Available	699	Open in IMG/M
3300025911\|Ga0207654_10362781	All Organisms → cellular organisms → Bacteria → Acidobacteria	1000	Open in IMG/M
3300025917\|Ga0207660_10136147	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → unclassified Chlorobium → Chlorobium sp.	1874	Open in IMG/M
3300025929\|Ga0207664_10468083	Not Available	1126	Open in IMG/M
3300025934\|Ga0207686_11454205	Not Available	565	Open in IMG/M
3300025935\|Ga0207709_11471517	Not Available	565	Open in IMG/M
3300025941\|Ga0207711_10037508	Not Available	4117	Open in IMG/M
3300025945\|Ga0207679_10411035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1192	Open in IMG/M
3300026281\|Ga0209863_10222430	Not Available	544	Open in IMG/M
3300027821\|Ga0209811_10184308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	784	Open in IMG/M
3300027866\|Ga0209813_10426217	Not Available	539	Open in IMG/M
3300027898\|Ga0209067_10000596	All Organisms → cellular organisms → Bacteria	22885	Open in IMG/M
3300030399\|Ga0311353_11354997	Not Available	581	Open in IMG/M
3300031231\|Ga0170824_104285895	Not Available	665	Open in IMG/M
3300031231\|Ga0170824_113766153	Not Available	657	Open in IMG/M
3300031234\|Ga0302325_10784246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S156	1350	Open in IMG/M
3300031236\|Ga0302324_100902378	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300031446\|Ga0170820_11356885	Not Available	1024	Open in IMG/M
3300031525\|Ga0302326_13334243	Not Available	538	Open in IMG/M
3300031708\|Ga0310686_114287507	All Organisms → cellular organisms → Bacteria	2196	Open in IMG/M
3300031912\|Ga0306921_12770183	Not Available	502	Open in IMG/M
3300031954\|Ga0306926_11629338	Not Available	739	Open in IMG/M
3300031996\|Ga0308176_12461016	Not Available	555	Open in IMG/M
3300032160\|Ga0311301_10725328	Not Available	1389	Open in IMG/M
3300032770\|Ga0335085_10207401	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2395	Open in IMG/M
3300032770\|Ga0335085_10841184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1006	Open in IMG/M
3300032782\|Ga0335082_11127989	Not Available	651	Open in IMG/M
3300032954\|Ga0335083_10546345	All Organisms → cellular organisms → Bacteria → Acidobacteria	963	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.64%
Host-Associated	Host-Associated	30.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.25%
Plants	Host-Associated → Plants	30.36%
Aquatic	Environmental → Aquatic	13.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.86%
Freshwater	Environmental → Aquatic → Freshwater	8.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.14%
Roots	Host-Associated → Plants → Roots	5.36%
Sediment	Environmental → Aquatic → Sediment	4.46%
Peat	Environmental → Terrestrial → Peat	3.57%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.61%
Loam	Environmental → Terrestrial → Soil → Loam	8.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.57%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.79%
Ice	Environmental → Aquatic → Freshwater → Ice	0.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.14%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.89%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.57%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.57%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.68%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.68%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.79%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.89%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1025922912	3300004479	Soil	MNRLYYADNRFVGPLPGGECMKKSSRLTGLVLTLMGAMVLLNNLGKPRVEALHGPDILGLVASGMLFGIGFAGLMGILSFPSSTKDQS*
Ga0066690_110398291	3300005177	Soil	MKKSSRFTGLVLTLLGAMVLLNNLGKPRVEALHGSDVGGLVASGMCLGIGFIGLMGRRSFGALE
Ga0070676_112101661	3300005328	Miscanthus Rhizosphere	MKKSSRLTGLVLTLMGIPPLLNSLDKPSVAALHGLEVLRLVAAGMLFGVGFVGLMGRL
Ga0070676_112534371	3300005328	Miscanthus Rhizosphere	MKKSSRLTGLALTGIGVMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFAGLMGILSFPSSTKDQS*
Ga0070690_1014637391	3300005330	Switchgrass Rhizosphere	MKKSSRLTGLALTLMGAMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFVGLMGILSFPSSTKDQS*
Ga0070670_1014542641	3300005331	Switchgrass Rhizosphere	MKKSSRLTGLVVTLMGILPLLNHLGKPGVAALRGSDVLGLVAAGMLFGVGFVGLMGRLDLTSSRKDQSNGSV*
Ga0066388_1040988292	3300005332	Tropical Forest Soil	MKRSSRLTGLVLTLIGVLVLLNNLGKPRVEALHGPDVLGLVAAGMLLGIGFVGLMGRLDFARSTKDQS*
Ga0070680_1001400383	3300005336	Corn Rhizosphere	MKSSRFTGLVLTLLGAMVLLNNLGKPRVEALHGSDVWGLVASGICLGIGFVGLMGRLQLSSFGTSRVRDGDRS*
Ga0068868_1010495432	3300005338	Miscanthus Rhizosphere	MKKSSRWTGLGLTLLGAMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFAGLMGRLSFPSSTKDQS*
Ga0070660_1001836992	3300005339	Corn Rhizosphere	MATGGECMKSSRFTGSVLTLLGAMVLLNNLGKPRVEALHGSDVWGLVASGICLGIGFVGLMGRLQLSSFGTSRVRDGDRS*
Ga0070661_1009221741	3300005344	Corn Rhizosphere	MKKSSRLTGLVVTLMGILPLLNNLGKPRVAALHGSDVLGLVAAGMLFGVGFVGLMGRLDLPSSR
Ga0070688_1007156092	3300005365	Switchgrass Rhizosphere	MRAGAVHEEKAAGLVLALPGAMVLLNKLGKPRVEALHGSDVWGLVASGICLGIGFVGLMGRLNFASSQKDQSKPPRNE*
Ga0070701_104803102	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MKKSSRWTGLGLTLLGAMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFVGLMGILSFPSSTKDQS*
Ga0070700_1018813202	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKKSSRWTGLGLTLLGAMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFAGLMGILSFPSSTKDQR*
Ga0070678_1011515702	3300005456	Miscanthus Rhizosphere	MKKSSRLTGLVLMLVGALVLLNNLGKQRVEALHVPEVMGLVAAGMLLGIGFVGLMGRLDFTSSTKGQS*
Ga0070696_1015074231	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKKSSRLTGLVLTGMGAMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFAGLMGILSFPSSTKDQS*
Ga0070704_1004368102	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKKSSRWTGLGLTLLGAMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFVGLMCILSFPSSTKDQS*
Ga0068859_1019647391	3300005617	Switchgrass Rhizosphere	MFKGTVKEKWADLKKSSRFTGLVLALLGAIKLLNDLGKPRVEGLHGVDVLGLVASGMLFGVGFVGLMGRL
Ga0080027_102680662	3300005993	Prmafrost Soil	MKKSSRFTGLALALMGVMKLLNDLGKPRVEALHGSDVLGLVASGMLLGVGFVGLMGRLNFASSRKDQSRPPRNE*
Ga0066789_105090462	3300005994	Soil	MFKGTVKEKWADLKKSSRFTGLVLALLGAMVLLNNLGKPRVEALHGSDVWGLVASRLCLGIGFVGLMGRL
Ga0075368_100076072	3300006042	Populus Endosphere	MKKSSRLTGVVLMLIGALVLLNNMGKPRIEALHVPDVLGLVAAGMLLGIGFVGLMGRLDFTSSAKDQR*
Ga0075024_1005926441	3300006047	Watersheds	MLKRSRFAGLVLGLLGLLVLLNNLGKPRVAALHGPDILGLIASGMCFGVGLVMLMGRFKDRNE*
Ga0075028_1008305971	3300006050	Watersheds	FTGLVLAVLGTIKLLNHLGQPRIDALHGIDVFRLVTSGAMLGIGFVGLMGRLNFASSQKDQSKPPRNE*
Ga0075029_1000004734	3300006052	Watersheds	MKKSSRFTGLVLTLLGAMVLLNNLGQPRVEALHGSDVGGLVASDICLGIGFVGLMGRLKLWSFGTS*
Ga0075367_100815093	3300006178	Populus Endosphere	MKNSSRLTGLVLTLIGVLVLLNNLGKPRVEALHGPDVLGLVAAGMLLGIGFVGLMGRLDFARSTKHQS*
Ga0097621_1007152052	3300006237	Miscanthus Rhizosphere	SRLTGLVVTLMGILPLLNHLGKPGVAALRGSDVLGLVAAGMLFGVGFVGLMGRLDLTSSRKDQSNGSV*
Ga0075370_108190301	3300006353	Populus Endosphere	MKKSSRLTGLVLTLIGMLVLLNNLGKPRVEALHVPDVLGLVAAGMLLGIGFVGLMGRLDFARSTKDHS*
Ga0073928_107568942	3300006893	Iron-Sulfur Acid Spring	LIDDGTRKAGRFAGLVLALLGAMVLLNNLGKPRVEALHRTDVGGLVVFGIWLGIRFVGLMGRLKLWSFGSE*
Ga0105247_113451762	3300009101	Switchgrass Rhizosphere	MKKSSRLTGLVLTLIGVLVLLNSLGKPRVEALHGSDVLGLVAAGMLLGIGFVGLMGRLDFARSTKDHS*
Ga0105248_100165201	3300009177	Switchgrass Rhizosphere	LDRNEHREQRHESIEAESGGECMKKSSRLTGLALTLVGAMVLLNSLGKPRVETLHGPDILGLVASGMLFGIGFAGLMGILSFPNSTKDQK*
Ga0105238_123569341	3300009551	Corn Rhizosphere	DTGSWNHYPGGECMKKSSRITGLVLKLIGALVLLNNLGKPRVEALHGPDALGLVASAFLLGIGFASLMAWLKPGIFASATKDQS*
Ga0074044_108309851	3300010343	Bog Forest Soil	MKKSSRFNGLVLALLGAMMLLNNLGKPRVEALHGSDVWGLVASGMLLGIGFVGLMGRLSFASSRKDQSRPPRNE*
Ga0126377_132327751	3300010362	Tropical Forest Soil	MKKSSRLTGLVLTLIGVLVLLNNLGKPRVEALHGPDVLGLVAAGMLLGIGFVGLMGRLDFARSTKDQS*
Ga0126379_116474702	3300010366	Tropical Forest Soil	MRAGGEFMKKSSRFVGLALMLMGTMVLLNNLGKPRIEALHGSDVLGLVASGMCLGIGFVGLLGRLSFGKE*
Ga0136449_1009877301	3300010379	Peatlands Soil	MKKSSRLTGVVMMLVGAMVLSNNLDKPRVAALHGSDVLGVVASGMLLGVGFFGLMGRLNFARSRKDQSRPPRNE*
Ga0136449_1016132672	3300010379	Peatlands Soil	MKKSSRFTGLVLALLGAMVLLNNLGKPRVEALHGSDVWGLVASGMLLGIGFVGLMGRLSFASSRKDQSRPPRNE*
Ga0134127_130523511	3300010399	Terrestrial Soil	MKKSSRLTGLVVTLMGILPLLNNLGKPRVAALHGSDVLGLVAAGMLFGVGFVGLMGRLDLPSGRKDQSNGSV*
Ga0134122_112219791	3300010400	Terrestrial Soil	VEPLPGGKRIKKSSRLTGLVVTLMGILPLLNHLGKPSVAALRGGDVLGLVAAGFLFGIGFVGLMGRLDTSFRKDQSNGSV*
Ga0134121_125865582	3300010401	Terrestrial Soil	MKKSSRLTGLVLTLMGAMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFFGLMGMLSFPNSTKDQS*
Ga0134121_131423121	3300010401	Terrestrial Soil	MKKSSRLTGLVLTGMGAMVLLNNLGKPRVEELHGPDILGLVAAGMLLGIGFFGLMGRLNFASSTKDQS*
Ga0134123_111497802	3300010403	Terrestrial Soil	MKKSSRLTGLVLTLMGAMVLLNNLGKPRVEALHGPDILGFVASGMLLGIGFAGLMGILSFPSSTKDQS*
Ga0137388_113076851	3300012189	Vadose Zone Soil	VIALLGVMKLLNDLGKPRVEALHPIDVFGLVASGGLLAVGFFGLMGMLNFPNSRKDQSSPPRNE*
Ga0137380_114127761	3300012206	Vadose Zone Soil	MRAGGEYMKKSSRFTGLALALMGVMKLLNDLGKPRVEALHGADVLGLVASGMLLGVGFVGLMGRLNFDSSQKD*
Ga0150985_1114875192	3300012212	Avena Fatua Rhizosphere	MKKSSRLTGLVVTLMGILPLLNHLGKPRVAALHGSDVLGLVAAGFLFGIGFVGLMGRLDLPSSRKDQSNGSV*
Ga0137386_111362401	3300012351	Vadose Zone Soil	MRAGGEYMKKSSRFTGLALALMGVMKLLNDLGKPRVEALHGSDVLGLVASGMLLGVGFVGLMGRLNFASSQKDQSKPPRNE*
Ga0150984_1144271992	3300012469	Avena Fatua Rhizosphere	MKKSSRLTGLVITLMGILPLLNNLGKPRVAALHGSDVLGLVAAGMLFGVGFVGLMGALDLPSSRKDQRNGSV*
Ga0136612_106249072	3300012680	Polar Desert Sand	GECMKKSSRFTGLVLALLGAMVLLNNLGEPRVEALHGSDVWGLVASGICLGIGFVGLMGRLKLWSFASSRTDQSRPPRNE*
Ga0137419_115767261	3300012925	Vadose Zone Soil	GAIKLSNDVGKPRIEALHGVDVLGLIASGMLFGVGFVGLMGRLNFASSQKDQSKPPRNE*
Ga0164300_102596631	3300012951	Soil	MKKSSRLTGLVLTGMGAMVLLNNLGKPRVETLHGPDILGLVASGMLLGIGFAGLMGILSFPNSTKDQS*
Ga0164303_114920912	3300012957	Soil	MKKSSRLTGLVLTLIGAMALLNNLGKPRVEALHGSDVLGLVAAGMLLGIGFVGLMGRLDFARS
Ga0164303_115073241	3300012957	Soil	MFKGTVKEKWADLKKSSRFTGLVLALLGAIKLLNDLGKPRVEALHGADVLGLVASGMLLGVGFVGLMGRLNL
Ga0164299_105623962	3300012958	Soil	MKKSSRLTGLVLTGMGAMVLLNNLGKPRVETLHGPDILGLVASGMLLGIGFAGLMGILSFPSSTKDQS*
Ga0164299_108563582	3300012958	Soil	MKKSSRLTGLVLTLMGAMVLLNNLGKPRVEALHGPDILGLVASGMLFGIGFAGLMGILSFPNSTKDQK*
Ga0164301_117022341	3300012960	Soil	MKKSSRLTGLVLTLIGAMALLNNLGKPRVEALHGSDVLGLVAAGMLLGIGFVGLMGRLDFARSTKDHG*
Ga0126369_128624621	3300012971	Tropical Forest Soil	MRVGGEGMKKSSRFTGLVLVLLGAMVLLNNLGKPRVEALHGSDVGGLVASGMCLGIGLVGLMGRLTLWSFANSRK
Ga0164309_112011032	3300012984	Soil	MNHLYYGDNPFVGPLPGEECMKKSSRLTGLVLTLMGAMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFAGLMGILSFPSSTKDQS*
Ga0164304_102770702	3300012986	Soil	MKKSSRLTGLVLTGMGAMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFAGLMGILSFPNSTKDQS*
Ga0164305_122114901	3300012989	Soil	STAAGLVVAVLGTIKLLTELGKPRVEALHGIDVLGLVTSGALLGIGFVGLMGRLNFARSQKD*
Ga0157373_103830651	3300013100	Corn Rhizosphere	MATGGECMKSSRFTGLVLTLLGAMVLLNNLGKPRVEALHGSDVWGLVASGICLGIGFVGLMGRLQL
Ga0157370_100109295	3300013104	Corn Rhizosphere	MATGGECMKSSRFTGLVLTLLGAMVLLNNLGKPRVEALHGSDVWGLVASGICLGIGFVGLMGRLQLSSFGTSRVRDGDRS*
Ga0157374_113441012	3300013296	Miscanthus Rhizosphere	MKKSSRLTGLVLTLIGALVLLNNLGKPRVEALHGPDVLGLVASGMLLGIGFFGLMGRLNFASSTKDQS*
Ga0157374_117831332	3300013296	Miscanthus Rhizosphere	PGGDGMKKSSRLTGLVLTLIGAMALLNNLGKPRVEALHGSDVLGLVAAGMLLGIGFVGLMGRLDFARSTKDQPAQ*
Ga0163162_126505361	3300013306	Switchgrass Rhizosphere	MKKSSRLTGLVLTGMGAMVLLNNLGKPRVEALHGSDVLGLVASGFLLGIGFAGLMGILSF
Ga0181531_103209622	3300014169	Bog	MTKSGRFAGLALLLMGVMVLLNNLGKPRVEALHGSDVLGLVASGGLLGIGFIGLMGRLKE
Ga0181526_103818182	3300014200	Bog	MKKSSRFTALVLSLLGAMVLLNNLGKPRVDALHGSDVWGLVASGILLGIGFVGLMGRLKFGDD*
Ga0181526_109241262	3300014200	Bog	MKKSSRFTGLVLALLGAMVLLNNLGKPRVEALHGSDVWGLVASGMLLGIGFVGLMGRLSFASSRKDQSRPPGNE*
Ga0163163_131859871	3300014325	Switchgrass Rhizosphere	MKKSSRLTGLVVTLMGILPLLNHLGKPGVAALRGSDVLGLVAAGMLFGVGFVGLMGRLDLPSSRKDQSNGSV*
Ga0182014_100642434	3300014491	Bog	MKKSSRFTGLVLSLLGAMVLLNNLGKPRVEALHGSDVGGLVASGICLGIGFVGLMGRLKLWNFGNE*
Ga0182015_100557235	3300014495	Palsa	MRKSSRFTGLVLMLLGAMVLLNNLGKPRVEALHGSDVWGLVASGMLLGIGFVGLMGRLSFGTSRVRGGDRS*
Ga0182012_100690971	3300014499	Bog	MAARGVTMKKSSRFTGLVLALLGAMVLLNNLGKPRIGALHGSDVWGLVAAGMCLGIGFVGLMGMLKFRNE*
Ga0181516_107443711	3300014655	Bog	VLALLGAMVLLNNLGKPRVEALHGSDVWGLVASGMLLGIGFVGLMSMLSFPNSRKDQSRPPRNE*
Ga0157379_102936814	3300014968	Switchgrass Rhizosphere	MKKSSRLTGLALTLVGAMVLLNSLGKPRVETLHGPDILGLVASGMLFGIGFAGLMGILSFPNSTKDQK*
Ga0157379_114913072	3300014968	Switchgrass Rhizosphere	MKKSSRLTGLVLTLIGAMALLNNLGKPRVEALHGSDVLGLVAAGMLLGIGFVGLMDRLDFARSTKDHS*
Ga0132258_114904092	3300015371	Arabidopsis Rhizosphere	MKKSSRLTGLVLTGMGAMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFAGLMGILSFPSSTKDQR*
Ga0182032_116862081	3300016357	Soil	MNIFERLKELREKSSRFTGLVLMLLGAMKLLNDLGKPRVEALHGVDVLGLVASGGLLGIGFVGLMGRL
Ga0187875_101556052	3300018035	Peatland	MKKSSRFTGLVLALLGAMVLLNNLGKPRVEALHGSDVWGLVASGILLGIGFVGLMGRLKFGDD
Ga0187883_107224491	3300018037	Peatland	MRAGGECMKKSSRFTGLVLALLGAMVLLNNLGKPRVEALHGSDVWGLVASGMLLGIGFVGLMGRLSFA
Ga0187859_101989731	3300018047	Peatland	MKKSSRFTGLVLALLGAMVLLNNLGKPRVEALHGSDVWGLVASGMLLGIGFVGLMGRLSFASSRKDQSRPPRNE
Ga0187858_101193622	3300018057	Peatland	MRAGGECMKKSSRFTGLVLALLGAMVLLNNLGKPRVEALHGSDVWGLVASGMLLGIGFVGLMGRLSFASSRKDQSRPPRNE
Ga0184611_10564832	3300018067	Groundwater Sediment	MKKSSRLTGLVVTLMGILPLLNNLGKPRVAALHGSDVVGLVAAGMLFGVGFVGLMGRLDLPSSRKDQSNGSV
Ga0187771_101004623	3300018088	Tropical Peatland	MRAGGEYMKKSSRLTGLALALMGAMLLLNNLGKPRVEALHGADILKLVASGGLLGIGFVGLMGRLSFPSSRKDQSRPPRNE
Ga0173479_103886291	3300019362	Soil	DLKKSSRFTGLVLALLGAIKLLNDLGKPRVEALHGVDVLGLVASGGLLGIGFVGLMGRLNFASSQKDQSKPPRNE
Ga0182031_11160222	3300019787	Bog	MKKSSRFTGLVLSLLGAMVLLNNLGKPRVEALHGSDVGGLVASGICLGIGFVGLMGRLKLWNFGNE
Ga0207647_107153231	3300025904	Corn Rhizosphere	AAGPGPGCGPEQCMKKSSRFTGLVLALLGAMVLLNKLGKPRVEALHGPDILGLVASGMLLGIGFAGLMGILSFPSSTKDQR
Ga0207643_106171051	3300025908	Miscanthus Rhizosphere	MKKGSRFGSMQALMPPLMGVLLLLNNLGKPRVEALHGSDVLGLVASGFLLGIGFAGLLEREFGGFRRPPGY
Ga0207654_103627811	3300025911	Corn Rhizosphere	MKKSSRLTGLALTGIGVMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFAGLMGILSFPSSTKDQS
Ga0207660_101361472	3300025917	Corn Rhizosphere	MKSSRFTGLVLTLLGAMVLLNNLGKPRVEALHGSDVWGLVASGICLGIGFVGLMGRLQLSSFGTSRVRDGDRS
Ga0207664_104680832	3300025929	Agricultural Soil	MKSSRFTGSVLTLLGAMVLLNNLGKPRVEALHGSDVWGLVASGICLGIGFVGLMGRLQLSSFGTSRVRDGDRS
Ga0207686_114542052	3300025934	Miscanthus Rhizosphere	MKKSSRLTGLVLTLIGALVLLNNLGKPRVEALHGPDILGLVASGMLFGIGFAGLMGILSFPNSTKDQK
Ga0207709_114715171	3300025935	Miscanthus Rhizosphere	MKKSSRLTGLALTGIGVMVLLNNLGKPRVEALHGSDVLGLVGSGFLLGIGFTSLLAWLKPGAFASSTKD
Ga0207711_100375082	3300025941	Switchgrass Rhizosphere	MKKSSRLTGLALTLVGAMVLLNSLGKPRVETLHGPDILGLVASGMLFGIGFAGLMGILSFPNSTKDQK
Ga0207679_104110351	3300025945	Corn Rhizosphere	MKKSSRLTGLALTLMGAMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFAGLMGRLSFPSSTKDQS
Ga0209863_102224301	3300026281	Prmafrost Soil	GLALALMGVMKLLNDLGKPRVEALHGSDVLGLVASGMLLGVGFVGLMGRLNFASSRKDQSRPPRNE
Ga0209811_101843081	3300027821	Surface Soil	MKKSSRLTGLVLALMGAMVLLNNLGKPRVEALHGPDILGLVASGMLLGIGFAGLMGILSFPSSTKDQS
Ga0209813_104262172	3300027866	Populus Endosphere	MKKSSRLTGVVLMLIGALVLLNNMGKPRIEALHVPDVLGLVAAGMLLGIGFVGLMGRLDFTSSAKDQR
Ga0209067_1000059612	3300027898	Watersheds	MKKSSRFTGLVLTLLGAMVLLNNLGQPRVEALHGSDVGGLVASDICLGIGFVGLMGRLKLWSFGTS
Ga0311353_113549971	3300030399	Palsa	MKKSSRFTGLALSLLGAMVLLNNLGKPRVEALHGSDVWGLVASGMLLGIGFVGLMGRLKFGDD
Ga0170824_1042858952	3300031231	Forest Soil	MKKSSRLTGLAVALMGVMKLLNDLDKPRVQALHPVDVLGLVAAGMLFGVGFVGLMGRLDFTSSRKDQSRPPRNE
Ga0170824_1137661531	3300031231	Forest Soil	MKKSSRFTGLVLTLLGAMVLLNNLGKPRVEALHGADVLGLVASGMLLGVGFVGLMGRLNFASSQKDQSKPPRNE
Ga0302325_107842462	3300031234	Palsa	MKKSTVCRFSAGLLGAMVLLNNLGKPRVEALHGSDVWGLVASGVCFGIGFVGLMGRLKP
Ga0302324_1009023782	3300031236	Palsa	MKNSSRFTGLALALMGVMKLLNDLGKPRVEALHPIDVFGLVASGGLLGVGFFGLMGILNLPNS
Ga0170820_113568853	3300031446	Forest Soil	DLKNSSRFTGLVLAVLGTIKLLNDLGKPRVEALHGSDVLGLVASGMLLAVGFVGLMGRLNFASSRKDQSRPPRNE
Ga0302326_133342431	3300031525	Palsa	MKNSSRFTGLALALMGVMKLLNDLGKPRLEALHGSDVLGLVASGMLLGVGFVGLMGRLNFASSRKDQSRPPRNE
Ga0310686_1142875073	3300031708	Soil	MKKSSRVTGLVMALLGVIALLNYLGRPRVQALHGSDVWGLLASGGLLGIGLLGLAGRLGSGKG
Ga0306921_127701831	3300031912	Soil	MFNGAVKEKWADLKKSSRFTGLVLALLGAMKLLNDLGKPRVEALHGVDVFGLVAAGMLLGVGFVGLMGRLNF
Ga0306926_116293381	3300031954	Soil	TGLVLMLLGAMKLLNDLGKPRVEALHGSDVLGLVASGGLLGVGFVGLMGMLNSASSRKDQSRPPRNE
Ga0308176_124610161	3300031996	Soil	MKRSSRFTGLVLTLLGAMVLLNNLGKPGIEVLHGSDVAGLVASGVCLGIGFIGLMGRLQLRSFGTSRVPRGDRS
Ga0311301_107253281	3300032160	Peatlands Soil	MKKSSRLTGVVMMLVGAMVLSNNLDKPRVAALHGSDVLGVVASGMLLGVGFFGLMGRLNFARSRKDQSRPPRNE
Ga0335085_102074011	3300032770	Soil	MKTEADTEGQKQAKKSSRFTGLVLTLLGAMVLLNNLGKPRVEALHGSDVWGLVASGFCLGVGFVGLTGR
Ga0335085_108411843	3300032770	Soil	MKKSSRFTGLALALMGAMVLLNNLGKPRVEALHGSDVLGLVASGGLLGIGFVGLMGRLNFASSEKDQSRPPRKE
Ga0335082_111279891	3300032782	Soil	MKKSSRFTGLVLTLLGAMVLLNNLGKPRVQALHGSDVVGLVASGICLGIGFVGLMGRLKLWSFEPGSAQGDRS
Ga0335083_105463451	3300032954	Soil	MKTEADTEGQKQAKKSSRFTGLVLTLLGAMVLLNNLGKPRVEALHGSDVWGLVASGFCLGVGFVGLTGRLNFSSFASPPKDKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084465

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences