Metagenome / Metatranscriptome Family F084466

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F084466
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	107 residues
Representative Sequence	MRAIPTALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRG
Number of Associated Samples	106
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.74 %
% of genes near scaffold ends (potentially truncated)	96.43 %
% of genes from short scaffolds (< 2000 bps)	96.43 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (93.750 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.071 % of family members)
Environment Ontology (ENVO)	Unclassified (36.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.214 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 25.74% β-sheet: 0.00% Coil/Unstructured: 74.26%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00006	ATP-synt_ab	32.14
PF03653	UPF0093	1.79
PF03401	TctC	0.89
PF07497	Rho_RNA_bind	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1981	Protoporphyrinogen oxidase HemJ (unrelated to HemG or HemY)	Coenzyme transport and metabolism [H]	1.79
COG1158	Transcription termination factor Rho	Transcription [K]	0.89
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.75 %
Unclassified	root	N/A	5.36 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.89 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.07 %
Unclassified	root	N/A	5.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.79 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.39 %
Unclassified	root	N/A	5.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.79 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.89 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	29.46 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	3.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.79 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	3.57 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.79 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.79 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	3.57 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.79 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.79 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.89 %
Deuterostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Chordata	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Craniata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Vertebrata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Gnathostomata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Chondrichthyes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Elasmobranchii	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Selachii	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Galeomorphii	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Galeoidea	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Orectolobiformes	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Hemiscylliidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Chiloscyllium	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Chiloscyllium punctatum	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402F6KLX	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300000891\|JGI10214J12806_12993700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	565	Open in IMG/M
3300000956\|JGI10216J12902_111114876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	633	Open in IMG/M
3300000956\|JGI10216J12902_122003377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	676	Open in IMG/M
3300004643\|Ga0062591_101757962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	631	Open in IMG/M
3300004779\|Ga0062380_10352015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	632	Open in IMG/M
3300004808\|Ga0062381_10402275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	525	Open in IMG/M
3300005093\|Ga0062594_102889490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	535	Open in IMG/M
3300005167\|Ga0066672_11009013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	508	Open in IMG/M
3300005186\|Ga0066676_10653107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	715	Open in IMG/M
3300005329\|Ga0070683_101685083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	610	Open in IMG/M
3300005364\|Ga0070673_100137700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2057	Open in IMG/M
3300005436\|Ga0070713_101450840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	666	Open in IMG/M
3300005438\|Ga0070701_11129478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	553	Open in IMG/M
3300005440\|Ga0070705_101620974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	545	Open in IMG/M
3300005530\|Ga0070679_100736454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	929	Open in IMG/M
3300005535\|Ga0070684_101517161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	632	Open in IMG/M
3300005545\|Ga0070695_101364708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	587	Open in IMG/M
3300005560\|Ga0066670_10832658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300005564\|Ga0070664_100467181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1160	Open in IMG/M
3300005841\|Ga0068863_101072374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	810	Open in IMG/M
3300005844\|Ga0068862_101395201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	704	Open in IMG/M
3300006038\|Ga0075365_10433140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	928	Open in IMG/M
3300006046\|Ga0066652_101523421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	619	Open in IMG/M
3300006048\|Ga0075363_100559527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	683	Open in IMG/M
3300006050\|Ga0075028_100685144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	616	Open in IMG/M
3300006177\|Ga0075362_10463678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	645	Open in IMG/M
3300006177\|Ga0075362_10742621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	514	Open in IMG/M
3300006178\|Ga0075367_10930271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	555	Open in IMG/M
3300006178\|Ga0075367_10969363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	543	Open in IMG/M
3300006755\|Ga0079222_11984066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	571	Open in IMG/M
3300006794\|Ga0066658_10775136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	538	Open in IMG/M
3300006904\|Ga0075424_101780259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	652	Open in IMG/M
3300009098\|Ga0105245_11166690	All Organisms → cellular organisms → Bacteria → Proteobacteria	818	Open in IMG/M
3300009101\|Ga0105247_11362509	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300009233\|Ga0103856_10083778	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300009261\|Ga0103870_1044886	All Organisms → cellular organisms → Bacteria → Proteobacteria	580	Open in IMG/M
3300009551\|Ga0105238_12703494	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300009553\|Ga0105249_12119726	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300009651\|Ga0105859_1223023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	563	Open in IMG/M
3300009661\|Ga0105858_1130802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	696	Open in IMG/M
3300010038\|Ga0126315_11178919	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300010159\|Ga0099796_10109703	Not Available	1049	Open in IMG/M
3300010166\|Ga0126306_11511000	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300010375\|Ga0105239_12024937	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300010397\|Ga0134124_12789868	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300010400\|Ga0134122_10489393	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	1110	Open in IMG/M
3300012210\|Ga0137378_11190314	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300012212\|Ga0150985_110246367	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300012362\|Ga0137361_11100697	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300012469\|Ga0150984_111735631	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300012896\|Ga0157303_10277202	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300012898\|Ga0157293_10064385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	856	Open in IMG/M
3300012901\|Ga0157288_10147464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	698	Open in IMG/M
3300012904\|Ga0157282_10236993	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300012906\|Ga0157295_10147231	All Organisms → cellular organisms → Bacteria → Proteobacteria	702	Open in IMG/M
3300012909\|Ga0157290_10111672	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300012911\|Ga0157301_10108400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	827	Open in IMG/M
3300012913\|Ga0157298_10135760	All Organisms → cellular organisms → Bacteria → Proteobacteria	717	Open in IMG/M
3300012929\|Ga0137404_11840419	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300012944\|Ga0137410_10953244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	728	Open in IMG/M
3300012951\|Ga0164300_10396418	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300012961\|Ga0164302_11020333	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300013296\|Ga0157374_12841241	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300014166\|Ga0134079_10304873	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300014315\|Ga0075350_1097333	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300014497\|Ga0182008_10485919	All Organisms → cellular organisms → Bacteria → Proteobacteria	677	Open in IMG/M
3300014968\|Ga0157379_10541046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1083	Open in IMG/M
3300014968\|Ga0157379_11792071	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300014969\|Ga0157376_11972421	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300015190\|Ga0167651_1055418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	825	Open in IMG/M
3300015374\|Ga0132255_103077342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	712	Open in IMG/M
3300017647\|Ga0182748_1146574	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300017965\|Ga0190266_11116747	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300018089\|Ga0187774_10532402	All Organisms → cellular organisms → Bacteria → Proteobacteria	747	Open in IMG/M
3300018429\|Ga0190272_11746190	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300018476\|Ga0190274_10016004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4793	Open in IMG/M
3300018481\|Ga0190271_13380414	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300019361\|Ga0173482_10495532	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300019871\|Ga0193702_1033043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	655	Open in IMG/M
3300020059\|Ga0193745_1098890	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300020591\|Ga0180223_1008165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4016	Open in IMG/M
3300021086\|Ga0179596_10456077	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300022756\|Ga0222622_10273945	Not Available	1152	Open in IMG/M
3300023169\|Ga0247762_1069091	All Organisms → cellular organisms → Bacteria → Proteobacteria	981	Open in IMG/M
3300023261\|Ga0247796_1068843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	642	Open in IMG/M
3300025297\|Ga0209758_1048978	Not Available	1496	Open in IMG/M
3300025903\|Ga0207680_11030776	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300025927\|Ga0207687_11156684	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300025927\|Ga0207687_11367960	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300026035\|Ga0207703_10742902	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300026041\|Ga0207639_10751071	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300026067\|Ga0207678_11737083	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300026075\|Ga0207708_11801190	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300026089\|Ga0207648_11516316	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300027866\|Ga0209813_10171197	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300027909\|Ga0209382_11993415	Not Available	557	Open in IMG/M
3300028380\|Ga0268265_11367465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	709	Open in IMG/M
3300031231\|Ga0170824_121912648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	742	Open in IMG/M
3300031232\|Ga0302323_102610345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	577	Open in IMG/M
3300031455\|Ga0307505_10527110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	570	Open in IMG/M
3300031720\|Ga0307469_12261087	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300031731\|Ga0307405_10871863	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300031911\|Ga0307412_11149556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	693	Open in IMG/M
3300031943\|Ga0310885_10724285	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300032000\|Ga0310903_10641261	Not Available	569	Open in IMG/M
3300032005\|Ga0307411_11002671	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300032017\|Ga0310899_10555842	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300032126\|Ga0307415_100842012	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300033004\|Ga0335084_11224530	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300033233\|Ga0334722_11282154	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.29%
Host-Associated	Host-Associated	35.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.04%
Plants	Host-Associated → Plants	35.71%
Aquatic	Environmental → Aquatic	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.04%
Roots	Host-Associated → Plants → Roots	6.25%
Freshwater	Environmental → Aquatic → Freshwater	4.46%
Sediment	Environmental → Aquatic → Sediment	1.79%
Peat	Environmental → Terrestrial → Peat	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.96%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.25%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	6.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Lake	Environmental → Aquatic → Freshwater → Lake	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.04%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	6.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.68%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.79%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.79%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	1.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009233	Microbial communities of water from Amazon river, Brazil - RCM9	Environmental	Open in IMG/M
3300009261	Microbial communities of water from Amazon river, Brazil - RCM23	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015190	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017647	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C Kraft OP (version 2)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019871	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a1	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020591	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 5th pass 30_C Kraft OP (version 2)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025297	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_07733500	2070309009	Soil	MRPARTAAIALVLAAAATAPAFGIASVSVYGLRAPEEISGFSLNDSTNFEKTKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAHPRGIYAQVYLRRNFTIE
JGI10214J12806_129937002	3300000891	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKA
JGI10216J12902_1111148762	3300000956	Soil	VFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRGVYAQVYL
JGI10216J12902_1220033771	3300000956	Soil	LTALLLTAVTTAAHAVTSVNVFGLKAPEEVGGYRLNDSTNFERSKPGEGYGLDYSKPGWKLDVFIYDLKRSAIPEDAKSAIVRAEFERAREDVFLAQPRGLYAQVYL
Ga0062591_1017579622	3300004643	Soil	MRSARQALLTLGLVAAATSSAFGIASVNVFGLRAPEEIEGFTLNDSTNFEKVKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFE
Ga0062380_103520152	3300004779	Wetland Sediment	MDPLRTALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRG
Ga0062381_104022752	3300004808	Wetland Sediment	MRAIPAALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRGLYAQVYLRRNFTIEDAGKR
Ga0062594_1028894901	3300005093	Soil	MRSRWIVLTASVWLAAASGAAHAITSVNMFGLKAPEEVGGFRLNDSTNFERSRPGEGYGLDYSQPGWKLDVFIYDLKRNAIPEDAKSAIVRAEFERSRED
Ga0066672_110090131	3300005167	Soil	MRAVRTAAVALVLGAVAVAPAFGVASVSVFGLRAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKSAIVRAEFERVRADTFLAQPRGIYAQ
Ga0066676_106531071	3300005186	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGIYAQVYLRRNFTID
Ga0070683_1016850832	3300005329	Corn Rhizosphere	MRSIRAALFALVFAAAATGPAFAIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGL
Ga0070673_1001377001	3300005364	Switchgrass Rhizosphere	MRSIPAALFALVFAAAATGPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIV
Ga0070713_1014508402	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRAIPAALFALVFGAAATAPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGIYAQVYLRRNFTID
Ga0070701_111294782	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MQAARTALFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTSFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRGIYVQVYLRRNFTIE
Ga0070705_1016209741	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYA
Ga0070679_1007364542	3300005530	Corn Rhizosphere	MRAFRIAAIALVLGAVATAPAFGIASVSVYGLRAPEEISGFTLNDSTNYEKLKPGDGYALDYSQSGWKLDVFIYDLKRAAIPDDVKSAIVRAEF
Ga0070684_1015171612	3300005535	Corn Rhizosphere	MPSPRTALFALVFAAAATGPAFGIASVNVFGLRAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKTAIVKAEFERARADA
Ga0070695_1013647082	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MHAARTALFALVFGAAATVPAFGIASVNVFGLKAPEDIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDVFLAQPRGIYAQVYLRRNFTIDDGA
Ga0066670_108326582	3300005560	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDFKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLR
Ga0070664_1004671811	3300005564	Corn Rhizosphere	MRSIPTVLFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPRGIYAQVYLRRNFTIDDG
Ga0068863_1010723742	3300005841	Switchgrass Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDD
Ga0068862_1013952012	3300005844	Switchgrass Rhizosphere	MRSIPAALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPRGIYAQVYLRRNFT
Ga0075365_104331401	3300006038	Populus Endosphere	MPSLKTALVAIVLGAAATTAAHAIASVTVFGLKAPEDIGGFTLNDSVNYERAKAGEGYGLDYSQPGWKLDVYIYDLKRNAIPADAKSAIVRAEFERSREDVFLAQPRGLYAQVYLRRNFTIEDAR
Ga0066652_1015234212	3300006046	Soil	MRVLPAALLALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDPTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVK
Ga0075363_1005595271	3300006048	Populus Endosphere	MRAIPTALFALVFGAIATAPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLA
Ga0075028_1006851441	3300006050	Watersheds	MVSLRTALFALVFGAAATGPAFGIASVNVFGLRAPEEIDGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAQPRGLYAQ
Ga0075362_104636781	3300006177	Populus Endosphere	MRAVRTAAVALVLGAVAVAPAFGIAAVSVFGLKAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKTAIVRAEFERARADTFLAQPRGIYAQVYLRRNFTIEDSAK
Ga0075362_107426212	3300006177	Populus Endosphere	MPSLKTALVAMVLGAAATTAAHAIASVSVFGLKAPEEIGGFTLNDSVNYERSKPGDGYGLDYSQPGWKLDVYIYDLKRNAIPADAKSAIVRAEFERS
Ga0075367_109302711	3300006178	Populus Endosphere	MPSLKTALVAMVLGAAATTAAHAIASVSVFGLKAPEEIGGFTLNDSVNYERSKPGEGYGLDYSQPGWKLDVYIYDLKRNAIPADAKSAIVRAEFER
Ga0075367_109693631	3300006178	Populus Endosphere	MRAIPAALFALVFGAAATGPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARADAFMAQP
Ga0079222_119840661	3300006755	Agricultural Soil	MRVIPAALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARADAF
Ga0066658_107751362	3300006794	Soil	MRAIPTALFALVFGAIATAPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERVRAEAFLAQPRGLYAQVYLRRNFTIDDA
Ga0075424_1017802592	3300006904	Populus Rhizosphere	MRVLPATLFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERA
Ga0105245_111666902	3300009098	Miscanthus Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLY
Ga0105247_113625092	3300009101	Switchgrass Rhizosphere	MRSIPAVLFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTSFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRTAIPDDAK
Ga0103856_100837781	3300009233	River Water	MRFLKTALGAMMLGAAATTAALAIAPVTVFGLKAPEEISGFTLNDSVNYEKAKPGDGYGLDYSQPGWKLDVFIYDLKRNAIPDDAKSAIVRAEFERSREDAFLAVPRKK
Ga0103870_10448862	3300009261	River Water	MRFLKTALGAMMLGAAATTAALAIAPVTVFGLKAPEEISGFTLNDSVNYEKAKPGDGYGLDYSQPSWKLDVYIYDLKRNAIPPDAKSAIVRAEFERSREDTFMAQPRGLYAQ
Ga0105238_127034941	3300009551	Corn Rhizosphere	MRALPTAAIALVLGAAAVSPAFGIASVNVFGLRAPEEITGFQLNDSTNFEKIRPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKTAIVKAE
Ga0105249_121197262	3300009553	Switchgrass Rhizosphere	MRAFRTAAIALVLGAAAVAPAFGIAAVSVFGLKAPEEISGFTLNDSTNYEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKSAIVRAEFERV
Ga0105859_12230232	3300009651	Permafrost Soil	MRAIPAALFALVFGAVATGPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFE
Ga0105858_11308022	3300009661	Permafrost Soil	MRAIPAALFALVFGAVATGPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDASSAIVKAEFERARADAFLAQPRGLYAQVYLRRNFTVE
Ga0126315_111789192	3300010038	Serpentine Soil	MRLSSAALLALVLSAAATTAAYAIASVTVFGLKAPEEIDGFTLNDSVNFERAKAGEGYGLDYSRSGWKLDVYIYDLKRSAIPDDAKSAIVRAEFERSREDAFLAQPR
Ga0099796_101097032	3300010159	Vadose Zone Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDFKRAAIPDDAKSAIVKAEFERARAEAFLAQ
Ga0126306_115110001	3300010166	Serpentine Soil	MRPVLTAAIALVLAAAATAPAFGIASVSVYGLRAPEEISGFTLNDSTNLEKTKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAQPRGIYAQ
Ga0105239_120249371	3300010375	Corn Rhizosphere	MRSIPTVLFALVFGAAATAPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRTAIPDDAKSAIVKAEFER
Ga0134124_127898682	3300010397	Terrestrial Soil	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARADAFLAQPRGIYAQVYLRRNFTIDDAAK
Ga0134122_104893932	3300010400	Terrestrial Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNYTIDDVA
Ga0137378_111903141	3300012210	Vadose Zone Soil	MRAVRTAAVALVLGAVAVAPAFGVASVSVFGLKAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKSAIVRAEFERVRADTFLAQ
Ga0150985_1102463671	3300012212	Avena Fatua Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKA*
Ga0137361_111006971	3300012362	Vadose Zone Soil	MRTIPTVLFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAK
Ga0150984_1117356312	3300012469	Avena Fatua Rhizosphere	MRAFRTAAIALVLAAVATAPAFGVASVSVFGLKAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKSA
Ga0157303_102772021	3300012896	Soil	MRSIPAALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRSAIPEDAKSAIVRAEFERVRADAFLAQPRGVYGQVYLRHHRRHGQADALPVRR
Ga0157293_100643852	3300012898	Soil	LVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRGVYAQVYLRRNFTIDDPSKRT
Ga0157288_101474642	3300012901	Soil	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRGVYA
Ga0157282_102369932	3300012904	Soil	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFE
Ga0157295_101472311	3300012906	Soil	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFERVRADAFLAQPRGSMARSICGTIDDTAKRTRFQCA
Ga0157290_101116721	3300012909	Soil	MRPARTAAIALVLAAAATAPAFGIASVSVYGLRAPEEISGFALNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFER
Ga0157301_101084001	3300012911	Soil	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFERVR
Ga0157298_101357601	3300012913	Soil	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRGVYAQVYLRRNFTIDDPSKRTRF
Ga0137404_118404191	3300012929	Vadose Zone Soil	MRAVRTAAVALVLGAVAVAPAFGIAAVSVFGLKAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKSAIVRAEFERVRADTFL
Ga0137410_109532441	3300012944	Vadose Zone Soil	MRAIPTALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRG
Ga0164300_103964182	3300012951	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYL
Ga0164302_110203332	3300012961	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGIYAQVYLRRNFTVDDV
Ga0157374_128412412	3300013296	Miscanthus Rhizosphere	MRSIPAALFALVFAAAATGPAFAIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVR
Ga0134079_103048732	3300014166	Grasslands Soil	MRTIPTVLFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDFKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNF
Ga0075350_10973332	3300014315	Natural And Restored Wetlands	MAVRRISSIALAWFAAANLAGVTSAHATPVTVFGLKAPEEVGGFRFNDSTNLERSKPGDGFSLDYSQPGWKLDVFVYDLRRTAIPEDAKSAIVRAE
Ga0182008_104859191	3300014497	Rhizosphere	MRLSRIALLTFGLVAAATSSAFAVASVNVFGLRAPEEIEGFTLNDSTNFERTKPGDGYGLDYSQSGWKLDVFIYDLKRVAIPDDPKSAIVRAEFERARSDAF
Ga0157379_104792252	3300014968	Switchgrass Rhizosphere	MQAARTALFALVFGAAATVPAFGIASVNVFGLKAPDETEGFTLNDSTSFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFERVRADAFLAQPARGLWPGLSAAPSTTRPSGRASSAPHST*
Ga0157379_105410461	3300014968	Switchgrass Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVA
Ga0157379_117920712	3300014968	Switchgrass Rhizosphere	MRATRTAVIALVLAAAATAPAFGIAPVSVYGLKAPEEISGFTLNDSTNFEKTKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAQPRGIYAQVYLRRNF
Ga0157376_119724211	3300014969	Miscanthus Rhizosphere	MRVLPAALLALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGIYAQVYLRRNF
Ga0167651_10554181	3300015190	Glacier Forefield Soil	MQAVRTALFALVFGAAATVPAFGIAAVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFERVRADAFLAQPRGVY
Ga0132255_1030773421	3300015374	Arabidopsis Rhizosphere	MRSARTALLALGLIAAATAPAWAIASVNVFGLRAPEEIEGFTLNDSTNFEKVKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARADAFLAAPRG
Ga0182748_11465742	3300017647	Compost	MTARTAAFALVFWAAASAEAFAIASVNVYGLRAPEEISGFTLNDSTNFEKVKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAYLAQPRGIYAQVYLRRNFTV
Ga0190266_111167472	3300017965	Soil	MRPARTAAIALVLAAAATAPAFGIASVSVYGLRAPEEISGFALNDSTNFEKTKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAHPRGIYAQVYLRRNFTVE
Ga0187774_105324021	3300018089	Tropical Peatland	MPRAWTAAIALVLGAAATGPAFGIAAVNVFGLRAPEEIAGFTLNDSTNFERGKPGDGYGLDYSQSGWKLDVFIYDLKRVAIPDDVKSAIVKAEFERSRAEAFLSQPRG
Ga0190272_117461902	3300018429	Soil	MRACRTALFALVFGAAATVAAATVARAIAPVTVFGLRAPDEVGGFKLNDSTNFERTKPGDGYGLDYSQPGWKLDVFIYDLKRNAIPDDAKSAIVRAEFERSREDVFLAQPRGL
Ga0190274_100160042	3300018476	Soil	MRARGTALIALVLLAAATTAAHAIASVTVFGLRAPDEVGGFRLNDSMNFERSKPGEGYSLDYSQPGWKLDVFIYDLKRSAIPDDAKSAM
Ga0190271_133804142	3300018481	Soil	MRPARTAAIALVLAAAATAPAFGIASVSVYGLRAPEEISGFALNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKAAIVRAEFERARADAFLAHPRGIYAQVYLRRNFTIEDGG
Ga0173482_104955321	3300019361	Soil	MRAIPAVLFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTSFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEF
Ga0193702_10330431	3300019871	Soil	MRSIPAALFALVFGAVATVPAFGIASVTVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERAR
Ga0193745_10988901	3300020059	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARA
Ga0180223_10081655	3300020591	Compost	MTARTAAFALVFWAAASAEAFAIASVNVYGLRAPEEISGFTLNDSTNFEKVKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAYLAQPRGIYAQVYLRRNF
Ga0179596_104560772	3300021086	Vadose Zone Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDFKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIEDA
Ga0222622_102739451	3300022756	Groundwater Sediment	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFL
Ga0247762_10690912	3300023169	Plant Litter	MRARWTVLIVSMFVAAASTAAHAVASVNVFGLKAPEEVVGFRLNDSTNFERNKPGEGYGLDYSLPGWKLDVFIYDLKRSAIPEDAKSAIVRAEFERSREDVFLAQPRGLYAQVYLRRNFTIED
Ga0247796_10688432	3300023261	Soil	MRAARTALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPRGIYAQVY
Ga0209758_10489781	3300025297	Arabidopsis Rhizosphere	MRAFRTAAIALVLAAVATAPAFGVASVSVFGLKAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDVKSAIVRAEFERARADTFFAQPRGIYAQVYLKRNFTIEDSAKR
Ga0207680_110307762	3300025903	Switchgrass Rhizosphere	MMRAIPAALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDA
Ga0207687_111566842	3300025927	Miscanthus Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAK
Ga0207687_113679601	3300025927	Miscanthus Rhizosphere	MRVLPAALLALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIV
Ga0207703_107429022	3300026035	Switchgrass Rhizosphere	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFERVRADAFLAQ
Ga0207639_107510711	3300026041	Corn Rhizosphere	MRAIPAVLFALVFGAAATVPAFGIASVNVFGLKAPEDIEGFTLNDSTNFEKIRPGEGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAE
Ga0207678_117370832	3300026067	Corn Rhizosphere	MRSIPAALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPRGIYAQ
Ga0207708_118011902	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVK
Ga0207648_115163161	3300026089	Miscanthus Rhizosphere	MRSIPAALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPRGIYAQV
Ga0209813_101711972	3300027866	Populus Endosphere	MRAVRTAAVALVLGAVAVAPAFGIAAVSVFGLKAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKTAIVRAEFERARAD
Ga0209382_119934151	3300027909	Populus Rhizosphere	MQLPKTALLGFALGAGLAVAPAWAVTSVTVFGLKAPDEVGGFTLNDSTNFEKTKPGDGYGLDYAQPGWKLDVFVYDLRRVAIPDDAKSAIVRAEFERSRQDVFLAAPRGLYAQV
Ga0268265_113674652	3300028380	Switchgrass Rhizosphere	MRSIPAALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPR
Ga0170824_1219126481	3300031231	Forest Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDFKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVY
Ga0302323_1026103452	3300031232	Fen	MRAIPAALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIRPGDGFGLDYSQSNWKLDVFIYDLKRAAIPDDTK
Ga0307505_105271102	3300031455	Soil	MRLLRTAAIALVLGTAASGPAWAIASVTVFGLRAPEEIAGFTLNDSTNFEKGRPGDGYGLDYSQSGWKLDVFIYDLKRVAIPED
Ga0307469_122610872	3300031720	Hardwood Forest Soil	MRAIPAALFALVFGAAATVPAFGIASVNVFGLKAPEDIEGFTLNDSTNFEKIRPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERAR
Ga0307405_108718632	3300031731	Rhizosphere	MRSIPAALFALVFGAAATVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTD
Ga0307412_111495561	3300031911	Rhizosphere	MRSIPAALFALVFGAAATVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAQ
Ga0310885_107242851	3300031943	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQ
Ga0310903_106412611	3300032000	Soil	MRSRWIVLTASVWLAAASGAAHAITSVNMFGLKAPEEVGGFRLNDSTNFERSRPGEGYGLDYSQPGWKLDVFVYDLKRNAIPDDPKSAIVRAEFERSREDAFLA
Ga0307411_110026711	3300032005	Rhizosphere	MRPARTAAIALVLAAAATAPAFGIASVSVYGMRAPEEISGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERAR
Ga0310899_105558422	3300032017	Soil	MRSIPAALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAF
Ga0307415_1008420122	3300032126	Rhizosphere	MLSLKTALVALVLGAAATSAAHAIASVTVFGLKAPEEIGGFTLNDSVNYERAKAGEGYGLDYSQPGWKLDVYIYDLKRNAIPADAK
Ga0335084_112245302	3300033004	Soil	MRLIPAALFALVFGAAATVPAFGIASVNVFGLRAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDPKSAIVRAEFERARADAFLAQPRGLYAQ
Ga0334722_112821542	3300033233	Sediment	MRAAPTAIIALVLAAAATAPAFGIASVTVFGLRAPEEIGGFTLNDSINFEKTKPGDGYGLDYSQSGWKLDVFIYDLKRIAIPEDVKSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084466

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences