Metagenome / Metatranscriptome Family F084474

Basic Information
Family ID	F084474
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	80 residues
Representative Sequence	MPRYYFYSADLYTRDETQLTGGYHGVMTVDDDGKSASEVFGEVTDMLQSQTQEYIQEIARNSGQPADPQMFYFIVKQFYKVD
Number of Associated Samples	89
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.14 %
% of genes near scaffold ends (potentially truncated)	29.46 %
% of genes from short scaffolds (< 2000 bps)	80.36 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Most Common Taxonomy
Group	Unclassified (51.786 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.857 % of family members)
Environment Ontology (ENVO)	Unclassified (29.464 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.964 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.55% β-sheet: 30.00% Coil/Unstructured: 45.45%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.261.1.1: Hypothetical protein PH1602	d4dwra1	4dwr	0.65914
d.58.60.1: FepE-like	d3b8oa1	3b8o	0.6105
d.58.57.1: Transposase IS200-like	d2vjva1	2vjv	0.60979
d.252.1.1: CheC-like	d1xkra_	1xkr	0.6023
d.58.57.1: Transposase IS200-like	d2fyxa1	2fyx	0.59936

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF10688	Imp-YgjV	20.54
PF12710	HAD	8.04
PF13628	DUF4142	7.14
PF02567	PhzC-PhzF	6.25
PF08669	GCV_T_C	3.57
PF00551	Formyl_trans_N	2.68
PF13589	HATPase_c_3	1.79
PF02911	Formyl_trans_C	1.79
PF00905	Transpeptidase	1.79
PF00072	Response_reg	0.89
PF13619	KTSC	0.89
PF01435	Peptidase_M48	0.89
PF05368	NmrA	0.89
PF11838	ERAP1_C	0.89
PF05559	DUF763	0.89
PF03466	LysR_substrate	0.89
PF00437	T2SSE	0.89
PF02518	HATPase_c	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	6.25
COG0223	Methionyl-tRNA formyltransferase	Translation, ribosomal structure and biogenesis [J]	1.79
COG1415	Uncharacterized conserved protein, DUF763 domain	Function unknown [S]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.79 %
All Organisms	root	All Organisms	48.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.79 %
cellular organisms	root	All Organisms → cellular organisms	48.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.79 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8.93 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	3.57 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.79 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.79 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	3.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.79 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.89 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.79 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	3.57 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.89 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.79 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	3.57 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.89 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.89 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.79 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3.57 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.89 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.79 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3.57 %
Granulicella sp. L60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L60	0.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.89 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_103130628	Not Available	619	Open in IMG/M
3300004635\|Ga0062388_100504595	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300005260\|Ga0074072_1000052	All Organisms → cellular organisms → Bacteria → Proteobacteria	64970	Open in IMG/M
3300005329\|Ga0070683_100022630	All Organisms → cellular organisms → Bacteria → Proteobacteria	5620	Open in IMG/M
3300005336\|Ga0070680_100219315	Not Available	1605	Open in IMG/M
3300005434\|Ga0070709_10860310	Not Available	715	Open in IMG/M
3300005436\|Ga0070713_100536972	Not Available	1106	Open in IMG/M
3300005439\|Ga0070711_100768466	Not Available	815	Open in IMG/M
3300005458\|Ga0070681_11922795	Not Available	519	Open in IMG/M
3300005529\|Ga0070741_10175376	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300005529\|Ga0070741_10314096	Not Available	1466	Open in IMG/M
3300005532\|Ga0070739_10304422	Not Available	766	Open in IMG/M
3300005548\|Ga0070665_100029786	All Organisms → cellular organisms → Bacteria	5493	Open in IMG/M
3300005602\|Ga0070762_10845727	Not Available	621	Open in IMG/M
3300005610\|Ga0070763_10633292	Not Available	622	Open in IMG/M
3300005614\|Ga0068856_101356587	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300005712\|Ga0070764_10043329	All Organisms → cellular organisms → Bacteria	2295	Open in IMG/M
3300006176\|Ga0070765_101667009	Not Available	599	Open in IMG/M
3300006237\|Ga0097621_100592781	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300006893\|Ga0073928_10369155	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300009093\|Ga0105240_10004607	All Organisms → cellular organisms → Bacteria → Proteobacteria	20898	Open in IMG/M
3300009093\|Ga0105240_10030596	All Organisms → cellular organisms → Bacteria → Proteobacteria	6995	Open in IMG/M
3300009093\|Ga0105240_10046028	All Organisms → cellular organisms → Bacteria → Proteobacteria	5531	Open in IMG/M
3300009093\|Ga0105240_10338624	Not Available	1709	Open in IMG/M
3300009176\|Ga0105242_10514365	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300009545\|Ga0105237_11186621	Not Available	770	Open in IMG/M
3300009545\|Ga0105237_12522960	Not Available	524	Open in IMG/M
3300009551\|Ga0105238_10437561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1304	Open in IMG/M
3300009551\|Ga0105238_11422761	Not Available	721	Open in IMG/M
3300009633\|Ga0116129_1192457	Not Available	579	Open in IMG/M
3300010048\|Ga0126373_11997101	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300010371\|Ga0134125_10427991	All Organisms → cellular organisms → Bacteria → Proteobacteria	1468	Open in IMG/M
3300010371\|Ga0134125_11762221	Not Available	674	Open in IMG/M
3300010376\|Ga0126381_102064984	Not Available	821	Open in IMG/M
3300010379\|Ga0136449_101051108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1303	Open in IMG/M
3300010396\|Ga0134126_10001384	All Organisms → cellular organisms → Bacteria → Proteobacteria	30820	Open in IMG/M
3300010399\|Ga0134127_10448734	Not Available	1289	Open in IMG/M
3300012982\|Ga0168317_1046148	Not Available	1110	Open in IMG/M
3300013105\|Ga0157369_10706943	Not Available	1038	Open in IMG/M
3300013307\|Ga0157372_12876608	Not Available	551	Open in IMG/M
3300014969\|Ga0157376_12581112	Not Available	548	Open in IMG/M
3300015242\|Ga0137412_10812741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	685	Open in IMG/M
3300018088\|Ga0187771_10592721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	939	Open in IMG/M
3300020140\|Ga0179590_1106920	Not Available	755	Open in IMG/M
3300020580\|Ga0210403_10227503	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300020582\|Ga0210395_10463789	Not Available	953	Open in IMG/M
3300021086\|Ga0179596_10040948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1863	Open in IMG/M
3300021088\|Ga0210404_10627264	Not Available	612	Open in IMG/M
3300021168\|Ga0210406_10027773	All Organisms → cellular organisms → Bacteria	5153	Open in IMG/M
3300021168\|Ga0210406_11159310	Not Available	565	Open in IMG/M
3300021170\|Ga0210400_11674046	Not Available	501	Open in IMG/M
3300021180\|Ga0210396_10202725	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300021181\|Ga0210388_11275823	Not Available	621	Open in IMG/M
3300021402\|Ga0210385_10858399	Not Available	697	Open in IMG/M
3300021404\|Ga0210389_10323304	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1210	Open in IMG/M
3300021405\|Ga0210387_11744982	Not Available	526	Open in IMG/M
3300021406\|Ga0210386_10285443	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300021406\|Ga0210386_11009660	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300021407\|Ga0210383_10668529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	894	Open in IMG/M
3300021474\|Ga0210390_11017010	Not Available	677	Open in IMG/M
3300021475\|Ga0210392_10173109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1491	Open in IMG/M
3300021475\|Ga0210392_10298433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1154	Open in IMG/M
3300021478\|Ga0210402_10982875	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	771	Open in IMG/M
3300022726\|Ga0242654_10218804	Not Available	670	Open in IMG/M
3300024246\|Ga0247680_1061566	Not Available	548	Open in IMG/M
3300024347\|Ga0179591_1044842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3584	Open in IMG/M
3300025906\|Ga0207699_11163164	Not Available	571	Open in IMG/M
3300025912\|Ga0207707_10201173	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300025913\|Ga0207695_10003922	All Organisms → cellular organisms → Bacteria → Proteobacteria	20592	Open in IMG/M
3300025913\|Ga0207695_10089625	All Organisms → cellular organisms → Bacteria	3092	Open in IMG/M
3300025913\|Ga0207695_10282706	Not Available	1553	Open in IMG/M
3300025913\|Ga0207695_10343750	All Organisms → cellular organisms → Bacteria → Proteobacteria	1379	Open in IMG/M
3300025914\|Ga0207671_10079053	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300025916\|Ga0207663_10507115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	938	Open in IMG/M
3300025917\|Ga0207660_11627405	Not Available	520	Open in IMG/M
3300025924\|Ga0207694_10725958	Not Available	838	Open in IMG/M
3300025924\|Ga0207694_11527641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	563	Open in IMG/M
3300025928\|Ga0207700_10588865	Not Available	989	Open in IMG/M
3300025928\|Ga0207700_11914995	Not Available	519	Open in IMG/M
3300025934\|Ga0207686_10515708	Not Available	930	Open in IMG/M
3300026078\|Ga0207702_10604917	Not Available	1076	Open in IMG/M
3300027619\|Ga0209330_1144855	Not Available	536	Open in IMG/M
3300027773\|Ga0209810_1323506	Not Available	570	Open in IMG/M
3300028379\|Ga0268266_10006654	All Organisms → cellular organisms → Bacteria	10545	Open in IMG/M
3300028573\|Ga0265334_10031007	All Organisms → cellular organisms → Bacteria → Proteobacteria	2138	Open in IMG/M
3300028800\|Ga0265338_10700976	Not Available	699	Open in IMG/M
3300029951\|Ga0311371_10307742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2229	Open in IMG/M
3300029951\|Ga0311371_11629611	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L60	709	Open in IMG/M
3300029951\|Ga0311371_12670107	Not Available	502	Open in IMG/M
3300030520\|Ga0311372_10230095	All Organisms → cellular organisms → Bacteria	3041	Open in IMG/M
3300030580\|Ga0311355_10930419	Not Available	787	Open in IMG/M
3300031057\|Ga0170834_111078035	Not Available	613	Open in IMG/M
3300031057\|Ga0170834_113939339	Not Available	811	Open in IMG/M
3300031122\|Ga0170822_16026861	Not Available	594	Open in IMG/M
3300031128\|Ga0170823_14273036	Not Available	624	Open in IMG/M
3300031231\|Ga0170824_123700377	Not Available	528	Open in IMG/M
3300031446\|Ga0170820_14104246	Not Available	671	Open in IMG/M
3300031708\|Ga0310686_104778390	All Organisms → cellular organisms → Bacteria → Acidobacteria	4023	Open in IMG/M
3300031708\|Ga0310686_109438950	Not Available	520	Open in IMG/M
3300031708\|Ga0310686_112236445	All Organisms → cellular organisms → Bacteria → Proteobacteria	3507	Open in IMG/M
3300031708\|Ga0310686_112500005	All Organisms → cellular organisms → Bacteria → Proteobacteria	7768	Open in IMG/M
3300031708\|Ga0310686_116081156	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300031718\|Ga0307474_10723167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	787	Open in IMG/M
3300031754\|Ga0307475_10380032	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300031823\|Ga0307478_10218279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1540	Open in IMG/M
3300031962\|Ga0307479_10282775	Not Available	1640	Open in IMG/M
3300032174\|Ga0307470_10507923	Not Available	881	Open in IMG/M
3300032180\|Ga0307471_100565408	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300032893\|Ga0335069_10539216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1347	Open in IMG/M
3300032896\|Ga0335075_10074473	All Organisms → cellular organisms → Bacteria → Proteobacteria	4581	Open in IMG/M
3300032954\|Ga0335083_10850133	Not Available	728	Open in IMG/M
3300032954\|Ga0335083_11145838	Not Available	605	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.89%
Host-Associated	Host-Associated	24.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.32%
Plants	Host-Associated → Plants	24.11%
Aquatic	Environmental → Aquatic	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.43%
Peat	Environmental → Terrestrial → Peat	4.46%
Freshwater	Environmental → Aquatic → Freshwater	2.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.79%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Geologic	Environmental → Terrestrial → Geologic	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.86%
Loam	Environmental → Terrestrial → Soil → Loam	15.18%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Mine	Environmental → Terrestrial → Geologic → Mine	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	13.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.46%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.46%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.57%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1031306282	3300004092	Bog Forest Soil	TITMPRYYFYSADLYTREETQLTGGYHGIMTVDDDGKSASEVFGEVADLLQGQTQEYIQEIARNSGQAADPQMFYFIVKQFYKVD*
Ga0062388_1005045953	3300004635	Bog Forest Soil	MPRYYFYSADLYTRDETQLTGGYHGIMTVDGDTKSASEIFGEVTDLLQSQTQEYIQEIARTSGQAADPQMFYFIVKQFYKVD*
Ga0074072_100005219	3300005260	Soil	MARYFFYSADLYTRDDTQLTGGFHGVMTVDDDARNASEVFSDMTEMLQSQTQEYIQEVARNSGQPADPGVFYFIVKQFYRVE*
Ga0070683_1000226303	3300005329	Corn Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTVDDDGRNASEVFSDMTAMLQSQTQDYIQEIARNSGQPADPGVFYFIVKQFYRVE*
Ga0070680_1002193152	3300005336	Corn Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTVDDDGRNASEVFSDMTAMLQSQTQEYIQEIARNSGQPADPGVFYFIVKQFYRVE*
Ga0070709_108603102	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTIDDDAKSASDVFGEITDMLQAQTQGYIQEIARNSGQPADPNVFYFVVKQFYRVE*
Ga0070713_1005369721	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTRYFFYSADLYTRDDTQVTGGFHGVMTVDDDARNASDVFSDMTQMLQAQTQEYIQEIARNSGQPVDPGVFYFIV
Ga0070711_1007684662	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MARYFFYSADLYTREDTQLTGGYHGVMTVDDDAKSAAEVFGEIADMLQSQTQEYIQDVARSSGQAPDPNMFYFIVKQFYRVE*
Ga0070681_119227952	3300005458	Corn Rhizosphere	RDDTQLTGGFHGVMTIDDDAKTASDVFGEITEMLQSQTQGYIQEVARNSGQPADPNLFYFVVKQFYRVE*
Ga0070741_101753763	3300005529	Surface Soil	MARYYFYSADLYTREATQLTGGFHGVITVDDDMKSASDIFGEVADMLQSQTQAYIQEIARNTGQPADPNLFYFLIRQFYRVD*
Ga0070741_103140962	3300005529	Surface Soil	MPRYYFYSADLYTREETQLNGGYHGVVTVDDDAKSASEVFGEITDMLQSQTQEYIQEIARSTGQPADPQMFYFVVKQFNKVD*
Ga0070739_103044222	3300005532	Surface Soil	MARYYFYSADLYTRDATQLTGGFHGVLTVDDDAKSASDVFGEVADMLQSQTQAYIQEIARNTGQPPDPGLFYFLIRQFYRVD*
Ga0070665_1000297864	3300005548	Switchgrass Rhizosphere	MARFYFYSADLYTREATQLTGGFHGVLTVDDDAKSASAIFGDVADMLQSQTQGYIQEIARNSGAEPDPALFYFLIRQFYRVD*
Ga0070762_108457272	3300005602	Soil	MPRYYFYSADLYTRDETQLTGGYHGIMTVDADAKSASEVFGEVTDLLQSQTQEYIQEIARNSGQPADPQ
Ga0070763_106332921	3300005610	Soil	MPRYYFYSADLYTRDETQLTGGYHGVMTVDDDGKSASEVFGEVTDMLQSQTQEYIQEIARNSGQPADPQMFYFIVKQFYKVD*
Ga0068856_1013565873	3300005614	Corn Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTVDDDSRNASDVFSDMTQMLQAQTQEYIQEIARNSGQPADPGVFYFIVKQFYRVE*
Ga0070764_100433292	3300005712	Soil	MPRYYFYSADLYTRDETQLTGGYHGIMTVDADAKSASEVFGEVTDLLQSQTQEYIQEIARNSGQPADPQMFYFIVKQFYKVD*
Ga0070765_1016670091	3300006176	Soil	MPRFYFYSADLYTRDETQLTGGYHGVMTVDDDGKSASEVFGEVTDMLQSQTQEYIQEIAKASGQPADPQMFYFIVKQFYKVD*
Ga0097621_1005927812	3300006237	Miscanthus Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTVDDDARNASEVFSDMTEMLQSQTQEYIQEIARNSGQPADPGVFYFIVKQFYRVE*
Ga0073928_103691553	3300006893	Iron-Sulfur Acid Spring	MPRYYFYSADLYTREETQLTGGYHGIMTVDDDGKSASEVFGEVADMLQGQTQEYIQEIAKNSGQPADPQMFYFIVKQFYKVD*
Ga0105240_1000460714	3300009093	Corn Rhizosphere	MLVPGHYARNDLAMARYYFYSADLYTREDTQLTGGYHGVMTVDDDAKSASEVFGDVADMLQSQTQEYIDEIAKTSGQPADPQMFYFVVKQFYKVE*
Ga0105240_100305967	3300009093	Corn Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTIDDDSKSAGDVFGEVTDMLQSQTQGYIQEIARNSGQPADPNMFYFVVKQFYRVE*
Ga0105240_100460287	3300009093	Corn Rhizosphere	MPRYYFYSADLYTREETQLNGGYHGVVTVDDDAKSASEVFGEITDMLQSQTQEYIQEIARSTGQPADPQMFYFVVKQFNRVD*
Ga0105240_103386242	3300009093	Corn Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTVDDDARNASDVFSDMTQMLQAQTQEYIQEVARNSGQPADPGVFYFIVKQFYRVE*
Ga0105242_105143653	3300009176	Miscanthus Rhizosphere	CLESAMARYFFYSADLYTRDDTQLTGGFHGVMTVDDDARNASEVFSDMTEMLQSQTQEYIQEIARNSGQPADPGVFYFIVKQFYRVE*
Ga0105237_111866212	3300009545	Corn Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTIDEDAKSASDVFGEITDMLQAQTQGYIQEIARNSGQPADPNVFYFVVKQFYRVE*
Ga0105237_125229602	3300009545	Corn Rhizosphere	YFFYSADLYTRDDTQLTGGFHGVMTVDDDARNASDVFSDMTQMLQAQTQEYIQEVARNSGQPADPGVFYFIVKQFYRVE*
Ga0105238_104375612	3300009551	Corn Rhizosphere	MARYFFYSADLFTRDDTQLTGGYHGVMTVDDDAKSAPEVFGEITDMLQQQTQDYIRELSANQQTDPGMFYFIVKQFYRVE*
Ga0105238_114227612	3300009551	Corn Rhizosphere	MARYFFYSADLFTRDDTQLTGGYHGVMTIDDDAKSAAEVFGEITDMLQQQTQDYIRELSANQQTDPGMFYFIVKQFYRVE*
Ga0116129_11924571	3300009633	Peatland	MPRYYFYSADLYTRDETQLTGGYHGVMTVDEDTKSASEVFGEVTDLLQSQTQEYIQEIARSSGQPADPQMFYFIVKQFYKVD*
Ga0126373_119971011	3300010048	Tropical Forest Soil	MPRYYFYSADLYTREATQLTGGYHGIMTIDDDAKSASEVFGEITDMLQSQTQEYITEIARSGQPTDPQMFYFIVKQFNRVD*
Ga0134125_104279912	3300010371	Terrestrial Soil	MARYFFYSADLFTRDDTQLTGGFHGVMTVDDDARNASDVFSDMTEMLQSQTQEYIQEIARNSGQPADPGACYFIVKQFYRVE*
Ga0134125_117622211	3300010371	Terrestrial Soil	MARYFFYSADLYTRDDTQLTGGFHGVMTIDDDAKSASDVFGEITDLLQSQTQGYIQEIARNSGQATDPNMFYFVVKQFYRVE*
Ga0126381_1020649842	3300010376	Tropical Forest Soil	MPRHYFYSADLYTREETQLTGGYHGIMTIDDDAKSTSEVFGEVTDMLQSQTQEYIQEIARSGQPTDPQMFYFIVKQFNRVD*
Ga0136449_1010511082	3300010379	Peatlands Soil	MPRYYFYSADLYTREETQLTGGYHGIMTVDDDGKSASEVFGEVADMLQGQTQEYIQEIARNSGQPADPQMFYFIVKQFYKVD*
Ga0134126_1000138428	3300010396	Terrestrial Soil	MARYYFYSADLYTRADTQLTGGYHGIMTIDDDTKSASEVFGEVADMLQAQTQDYIQEIARSSGQATDPNLFYFIIKQFNRVD*
Ga0134127_104487341	3300010399	Terrestrial Soil	MARYFFYSADLYTRDDTQLTGGFHGVMTVDDDGRNASDVFSDMTEMLQSQTQEYIQEIARNSGQPADPGACYFIVKQFYRV
Ga0168317_10461482	3300012982	Weathered Mine Tailings	MARYFFYSADLYTRDDTQLTGGFHGVMTVDDDSRNASDVFSEMTQMLQAQTQEYIQEIARNSGQPADPGVFYFIVKQFYRVE*
Ga0157369_107069432	3300013105	Corn Rhizosphere	MARFYFYSADLYTREATQLTGGFHGVLTVDDDAKSASAIFGDVADMLQSQTQGYIQEIARNSGAEPDPALF
Ga0157372_128766082	3300013307	Corn Rhizosphere	MARYYFYSADLYTRDATQLTGGYHGVMTVDDDLKSASGVFGEVAEMLQSQTQGYIQEIARNNGQPADPGVFYFLIRQFYRV
Ga0157376_125811121	3300014969	Miscanthus Rhizosphere	MARDFFYSADLYTRDDTQLTGGFHGVMTVDDDSRNASDVFSDMTQMLQAQTQEYIQEIARNSGQPADPGVFYFIVKQFYRVE*
Ga0137412_108127411	3300015242	Vadose Zone Soil	MPRYYFYSADLYTREETQLTGGYHGIMTVDDDGKSASEVFGEVADMLQGQTQEYIQEIAKNSGQPADPQMFYFIVKQFYK
Ga0187771_105927211	3300018088	Tropical Peatland	SADLYTREATQLTGGYHGIMTIDDDAKSASEVFGEITDLLQSQTQEYIQEIARSGQPTDPQMFYFIVKQFNRVD
Ga0179590_11069202	3300020140	Vadose Zone Soil	MPRYYFYSADLYTREETQLTGGYHGIMTVDDDGKSASEVFGEVADMLQGQTQEYIQEIAKNSGQPADPQMFYFIVKQFYKVD
Ga0210403_102275033	3300020580	Soil	MPRYYFYSADLYTREETQLTGGYHGIMTVDDDGKSASEVFGEVADMLQAQTQEYIQEIAKNSGQPADPQMFYFIVKQFYKVD
Ga0210395_104637892	3300020582	Soil	MPRYYFYSADLYTRDETQLTGGYHGIMTVDADAKSASEVFGEVTDLLQSQTQEYIQEIARNSGQPADPQMFYFIVKQFYKVD
Ga0179596_100409482	3300021086	Vadose Zone Soil	MPRYYFYSADLYTREETQLTGGYHGIMTVDDDGKSASEVFGEVADLLQGQTQEYIQEIARNSGQPADPQMFYFIVKQFYKVD
Ga0210404_106272641	3300021088	Soil	MARHYFYSADLYTRAETQLTGGYHGVMTVEDDAKSPGEVFGEVADMLQSQTEEYIQEIARNSGRPADPAMFYFVVKQFYRVD
Ga0210406_100277734	3300021168	Soil	MPRYYFYSADLYTREETQLTGGYHGIMTVDDDAKSASEVFGEVADMLQGQTQEYIQEIARNSGQPADPQMFYFIVKQFYKVD
Ga0210406_111593102	3300021168	Soil	MPRYYFYSADLYTREETQLNGGYHGVVTVDDDAKSASEVFGEVTDMLQSQTQEYIQEIARATGQQADPQ
Ga0210400_116740462	3300021170	Soil	MPRYYFYSADLYTREETQLNGGYHGVVTVDDDAKSASEVFGEVTDMLQSQTQEYIQEIARATGQPADPQMFYFVVKQFNKV
Ga0210396_102027253	3300021180	Soil	MPRFYFYSADLYTRDETQLTGGYHGVMTVDDDAKSASEVFGEVTDMLQSQTQEYIQEIAKASGQPADPQMFYFIVKQFYKVD
Ga0210388_112758232	3300021181	Soil	MPRYYFYSADLYTRDETQLTGGYHGIMTVDEDTKSASEIFGEVTDLLQSQTQEYIQEIARTSGQAADPQMFYFIVKQFYKVD
Ga0210385_108583993	3300021402	Soil	MPRYYFYSADLYTREETQLTGGYHGIMTVDEDTKSASEVFGEVTDLLQSQTQEYIQEIARSSGQPADPQMFYFIVKQFHKVD
Ga0210389_103233043	3300021404	Soil	MPRYYFYSADLYTRDETQLTGGYHGIMTVDEDTKSASEVFGEVTDLLQSQTQEYIQEIARTSGQAADPQMFYFIVKQFYKVD
Ga0210387_117449821	3300021405	Soil	MPRYYFYSADLYTREETQLNGGYHGVVTVDDDAKSASEVFGEVTDMLQSQTQEYIQEIARATGQQADPQMFYFVVKQFNKVD
Ga0210386_102854431	3300021406	Soil	MPRYYFYSADLYTREETQLNGGYHGVLTVDDDAKSASEVFGEITEMLQSQTQEYIQEIARASGQPADPQMFYFVVKQFNKV
Ga0210386_110096603	3300021406	Soil	TREETQLTGGYHGIMTIDDDAKSTSEVFGEVTDMLQSQTQEYITEIARGGQPTDPQMFYFIVKQFNRVD
Ga0210383_106685291	3300021407	Soil	MPRYYFYSADLYTREETQLTGGYHGIMTVDDDGKSASEVFGEVADMLQGQTQEYIQEIAKNSGQPADPQMFYFIVKQFY
Ga0210390_110170101	3300021474	Soil	MPRYYFYSADLYTREETQLNGGYHGVLTVDDDAKSASEVFGEITEMLQSQTQEYIQEIARASGQPADPQMFYFVVKQFNKVD
Ga0210392_101731091	3300021475	Soil	MPRYYFYSADLYTREETQLTGGYHGIMTIDDDAKSASEVFGEVADMLQAQTQEYIQEIAKNSGQPADPQMF
Ga0210392_102984332	3300021475	Soil	MPRYYFYSADLYTREETQLNGGYHGVLTVDDDAKSASEVFGEITDMLQSQTQEYIQEIARNTGQPADPQMFYFVVKQFNKVE
Ga0210402_109828753	3300021478	Soil	PRYYFYSADLYTREETQLNGGYHGVVTVDDDAKSASEVFGEVTDMLQSQTQEYIQEIARATSQPADPQMFYFVVKQFNKVD
Ga0242654_102188041	3300022726	Soil	MPRFYFYSADLYTREETQLTGGYHGIMTVDDDAKSASEVFGEVADLLQSQTQEYIQEIAKNSGQPADPQMFYFVIKQFYKVD
Ga0247680_10615662	3300024246	Soil	MPRYYFYSADLYTRDETQLTGGYHGIMTVDEDAKSASEVFGEVTDLLQSQTQEYIQEIARSSGQPADPQMFYFIVKQFYKVD
Ga0179591_10448424	3300024347	Vadose Zone Soil	MPRYYFYSADLYTREETQLTGGYHGITTVDDDGKSASEVFGEVADMLQGQTQEYIQEIAKNSGQPADPQMFYSL
Ga0207699_111631641	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RDDTQLTGGFHGVMTVDDDARNASDVFSDMTQMLQAQTQEYIQEIARNSGQPVDPGVFYFIVKQFYRVE
Ga0207707_102011732	3300025912	Corn Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTVDDDGRNASEVFSDMTAMLQSQTQDYIQEIARNSGQPADPGVFYFIVKQFYRVE
Ga0207695_1000392214	3300025913	Corn Rhizosphere	MARFYFYSADLYTREATQLTGGFHGVLTVDDDAKSASAIFGDVADMLQSQTQGYIQEIARNSGAEPDPALFYFLIRQFYRVD
Ga0207695_100896254	3300025913	Corn Rhizosphere	MPRYYFYSADLYTREETQLNGGYHGVVTVDDDAKSASEVFGEITDMLQSQTQEYIQEIARSTGQPADPQMFYFVVKQFNRVD
Ga0207695_102827062	3300025913	Corn Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTIDDDSKSAGDVFGEVTDMLQSQTQGYIQEIARNSGQPADPNMFYFVVKQFYRVE
Ga0207695_103437503	3300025913	Corn Rhizosphere	MARYYFYSADLYTREDTQLTGGYHGVMTVDDDAKSASEVFGDVADMLQSQTQEYIDEIAKTSGQPADPQMFYFVVKQFYKVE
Ga0207671_100790534	3300025914	Corn Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTIDEDAKSASDVFGEITDMLQAQTQGYIQEIARNSGQPADPNVFYFVVKQFYRVE
Ga0207663_105071152	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MARYFFYSADLYTREDTQLTGGYHGVMTVDDDAKSAAEVFGEIADMLQSQTQEYIQDVARSSGQAPDPNMFYFIVKQFYRVE
Ga0207660_116274051	3300025917	Corn Rhizosphere	RDDTQLTGGFHGVMTVDDDGRNASEVFSDMTAMLQSQTQEYIQEIARNSGQPADPGVFYFIVKQFYRVE
Ga0207694_107259581	3300025924	Corn Rhizosphere	GVPPLIIPQFDAPPQKGTPTMARYFFYSADLFTRDDTQLTGGYHGVMTIDDDAKSAAEVFGEITDMLQQQTQDYIRELSANQQTDPGMFYFIVKQFYRVE
Ga0207694_115276412	3300025924	Corn Rhizosphere	MARYFFYSADLFTRDDTQLTGGYHGVMTVDDDAKSAPEVFGEITDMLQQQTQDYIRELSANQQTDPGMFYFIVKQFYRVE
Ga0207700_105888652	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTRYFFYSADLYTRDDTQVTGGFHGVMTVDDDARNASDVFSDMTQMLQAQTQEYIQEIARNSGQPVDPGVFYFIVKQFYR
Ga0207700_119149951	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPRYFFYSADLYTRDDTQLTGGFHGVMTVDDDSRNASDVFSDMTQMLQAQTQEYIQEIARNSGQPADPGVFYFIVKQFYRVE
Ga0207686_105157081	3300025934	Miscanthus Rhizosphere	CLESAMARYFFYSADLYTRDDTQLTGGFHGVMTVDDDARNASEVFSDMTEMLQSQTQEYIQEIARNSGQPADPGVFYFIVKQFYRVE
Ga0207702_106049173	3300026078	Corn Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTVDDDARNASDVFSDMTQMLQAQTQEYIQEIARNSGQPADPGVFYFIVKQFYRVE
Ga0209330_11448552	3300027619	Forest Soil	MPRYYFYSANLYTREETQLTGGYHGVMTVDEDTKSASEVFGEVTDLLQSQTQEYIQEIARTSGQPADPQMFYFIVKQFYKVD
Ga0209810_13235061	3300027773	Surface Soil	MARYYFYSADLYTRDATQLTGGFHGVLTVDDDAKSASDVFGEVADMLQSQTQAYIQEIARNTGQPPDPGLFYFLIRQFYRVD
Ga0268266_1000665411	3300028379	Switchgrass Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTIDDDAKSASDVFGEITDMLQAQTQGYIQEIARNSGQPADPNVFYFVVKQFYRVE
Ga0265334_100310073	3300028573	Rhizosphere	MARYFFYSADLYTRDDTQLTGGFHGVMTVDDDARNASEVFSDMTAMLQSQTQEYIQEIARSSGQPADPGVFYFIVKQFYRVE
Ga0265338_107009763	3300028800	Rhizosphere	YSADLYTREETQLTGGYHGIMTVDDDGKSASEVFGEVADMLQGQTQEYIQEIAKNSGQPADPQMFYFIVKQFYKVD
Ga0311371_103077423	3300029951	Palsa	MPRYYFYSADLYTRDETQLTGGYHGIMTVDADAKSASEVFGDVTDLLQSQTQEYIQEIARNSGQPADPQMFYFIVKQFYKVD
Ga0311371_116296112	3300029951	Palsa	MPRYYFYSADLYTREETQLTGGYHGVMTVEEDSKSASEVFGEVADLLQSQTQEYIQEIAKTSGQPADPQMFYFIVKQFYKVD
Ga0311371_126701071	3300029951	Palsa	MPRYYFYSANLYTREETQLTGGYHGVMTVDEDTKSASEVFGEVTDLLQSQTQEYIQEIARTSGQPADPQM
Ga0311372_102300953	3300030520	Palsa	MPRYYFYSADLYTREETQLTGGYHGVMTVDEDTKSASEVFGEVTDLLQSQTQEYIQEIARTSGQPADPQMFYFIVKQFYKVD
Ga0311355_109304192	3300030580	Palsa	MPRYYFYSADLYTREETQLTGGYHGVMTVDEDTKSASEVFGEVTDLLQSQTQEYIQEIARTSGQPA
Ga0170834_1110780352	3300031057	Forest Soil	MPRYYFYSADLYTREETQLNGGYHGVVTVDDDAKSASEVFGEVTDMLQSQNQEYIQEIARATGQPADPQMFYFVVKQFNKVD
Ga0170834_1139393391	3300031057	Forest Soil	MPRYYFYSADLYTREETQLNGGYHGVVTVDDDAKSASEVFGEVTDMLQSQTQEYIQEIARASGQPADPQMFYFVVKQFNKVD
Ga0170822_160268611	3300031122	Forest Soil	MPRYYFYSADLYTREETQLNGGYHGVVTVDDDAKSASEVFGEVTDMLQSQTQEYIQEIARATGQTADPQMFYFVVKQFNKVD
Ga0170823_142730361	3300031128	Forest Soil	MPRYYFYSADLYTREETQLNGGYHGVVTVDDDAKSASEVFGEVTDMLQSQTQEYIQEIARATGQPADPQMFYFVVKQFNKVD
Ga0170824_1237003771	3300031231	Forest Soil	MPRYYFYSADLYTREETQLTGGYHGIMTVDDDGKSASEVFGEVADMLQGQTQEYIQEIAKNSGQPANPQMFYFIVKQFYKVD
Ga0170820_141042461	3300031446	Forest Soil	MPRYYFYSADLYTREETQLNGGYHGVVTVDDAAKSASEVFGEVTDMLQSQTQEYIQEIARASGQTADPQMFYFVVKQFNKVD
Ga0310686_1047783902	3300031708	Soil	MPRYYFYSADLYTRDETQLTGGYHGVMTVDEDAKSASEVFGEVTDLLQSQTQEYIQEIARTSGQPADPQMFYFIVKQFHKVD
Ga0310686_1094389502	3300031708	Soil	MPRYYFYSADLYTREETQLTGGYHGVMTVEEDSKSASEVFGEVADLLQSQTQEYIQEIARSSGQPADPQMFYFIVKQFYKVD
Ga0310686_1122364452	3300031708	Soil	MPRYYFYSADLYTREETQLTGGYHGVMTVDDDAKSASEIFGEVTDLLQSQTQEYIQEIARTSGQPADPQMFYFIVKQFYKVD
Ga0310686_1125000053	3300031708	Soil	MPRYYFYSADLYTREDTQLTGGYHGIMTIDDDAKSASEVFGEITDLLQSQTQEYIQEIVRNSGQQADPQMFYFVVKQFNKVD
Ga0310686_1160811562	3300031708	Soil	MPRYYFYSADLYTREETQLNGGYHGVMTVDDDAKSASEVFGEITDMLQSQTQEYIQEIARSTGQPADPQMFYFVVKQFHKVD
Ga0307474_107231672	3300031718	Hardwood Forest Soil	MPRYYFYSADLYTREETQLTGGYHGIMTIDDDAKSASEVFGEITDLLQSQTQEYVQEIARSGQPSDPQMFYFIVKQFNRVD
Ga0307475_103800322	3300031754	Hardwood Forest Soil	MPRYYFYSADLYTREETQLTGGYHGIMTIDDDAKSASEVFGEITDMLQSQTQEYIQEVARSGQPTDPQMFYFIVKQ
Ga0307478_102182793	3300031823	Hardwood Forest Soil	LMPRYYFYSADLYTRDATQLTGGYHGIMTIDDDAKSASEVFGEITDLLQSQTQEYVQEIARSGQPSDPQMFYFIVKQFNRVD
Ga0307479_102827753	3300031962	Hardwood Forest Soil	MPRYYFYSADLFTREETQLTGGYHGTMTIDDDAKSASEIFGEITDLLQSQTQEYIQEIARSGQPTDPQMFYFIVKQFNRVD
Ga0307470_105079233	3300032174	Hardwood Forest Soil	MPRYYFYSADLYTREETQLTGGYHGIMTVDDDAKSASEVFGEVADMLQGQTQEYIQEIARNSGQPADPQMFY
Ga0307471_1005654082	3300032180	Hardwood Forest Soil	MARFFFYSADLYTREDTQLTGGYHGVMTVDDDAKSAAEVFGEIADMLQSQTQEYIQDVARNSGQPTDPNMFYFIVKQFYRVE
Ga0335069_105392162	3300032893	Soil	MPRYYFYTADLYTREETQLTGGYHGVVTVDDDSKSASEVFGEVTDMLQSQTQDYIQEIARSSGQQADPNLFYFVMKQFYKVD
Ga0335075_100744733	3300032896	Soil	MARYFFYSADLYTRDDTQLTGGFHGVMTVDDDAKSASEVFGEMTEMLQSQTQGYIQDIARNSGQPADPGVFYFIVKQFYRVE
Ga0335083_108501333	3300032954	Soil	PHYFRNTRAMPRYYFYTADLYTREETQLTGGYHGVVTVDEDTKSASEVFGEVTEMLQSQTQDYIQEIARNTGQPADPNMFYFVMKQFYKVD
Ga0335083_111458383	3300032954	Soil	TREETQLTGGYHGVVTVDDDSKSASEVFGEVTDMLQSQTQDYIQEIARSSGQQADPNLFYFVMKQFYKVD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084474

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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