Metagenome / Metatranscriptome Family F084480

Basic Information
Family ID	F084480
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	54 residues
Representative Sequence	VFVILGQLLRLQGEHWWRGSLLIPYGESIANGLRTLVGEERVRYSRSEEHLRV
Number of Associated Samples	99
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.21 %
% of genes from short scaffolds (< 2000 bps)	88.39 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Most Common Taxonomy
Group	Bacteria (52.679 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.929 % of family members)
Environment Ontology (ENVO)	Unclassified (34.821 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.57% β-sheet: 0.00% Coil/Unstructured: 65.43%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13522	GATase_6	73.21
PF00310	GATase_2	8.04
PF13660	DUF4147	3.57
PF00672	HAMP	0.89
PF05036	SPOR	0.89
PF00156	Pribosyltran	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.79 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	23.21 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.89 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.89 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.89 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.89 %
Neisseriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae	0.89 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.89 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.89 %
Kingella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Kingella	0.89 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.89 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.89 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.89 %
Kingella oralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Kingella → Kingella oralis	0.89 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Kingella oralis ATCC 51147	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Kingella → Kingella oralis → Kingella oralis ATCC 51147	0.89 %
Pseudomonas sp. 8O	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. 8O	0.89 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.89 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1042100	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1041784	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300001166\|JGI12694J13545_1001384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2953	Open in IMG/M
3300001471\|JGI12712J15308_10168080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	570	Open in IMG/M
3300004092\|Ga0062389_100512967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1348	Open in IMG/M
3300004479\|Ga0062595_100306631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1074	Open in IMG/M
3300005163\|Ga0066823_10045707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	776	Open in IMG/M
3300005176\|Ga0066679_10736399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	635	Open in IMG/M
3300005337\|Ga0070682_101803978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	534	Open in IMG/M
3300005363\|Ga0008090_10140933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	502	Open in IMG/M
3300005436\|Ga0070713_100176606	Not Available	1917	Open in IMG/M
3300005436\|Ga0070713_100722744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	952	Open in IMG/M
3300005538\|Ga0070731_10474522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	832	Open in IMG/M
3300005538\|Ga0070731_10578408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	748	Open in IMG/M
3300005560\|Ga0066670_10151181	Not Available	1356	Open in IMG/M
3300005568\|Ga0066703_10434489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	788	Open in IMG/M
3300006034\|Ga0066656_10226699	Not Available	1196	Open in IMG/M
3300006176\|Ga0070765_101218422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	711	Open in IMG/M
3300009174\|Ga0105241_10875670	All Organisms → cellular organisms → Bacteria → Proteobacteria	832	Open in IMG/M
3300009826\|Ga0123355_11771824	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300010046\|Ga0126384_10621588	Not Available	948	Open in IMG/M
3300010154\|Ga0127503_10466307	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300010358\|Ga0126370_10381000	Not Available	1152	Open in IMG/M
3300010398\|Ga0126383_11449683	Not Available	776	Open in IMG/M
3300012203\|Ga0137399_11679012	Not Available	524	Open in IMG/M
3300012362\|Ga0137361_10857207	Not Available	825	Open in IMG/M
3300014322\|Ga0075355_1089250	Not Available	750	Open in IMG/M
3300015051\|Ga0137414_1188265	Not Available	1423	Open in IMG/M
3300015241\|Ga0137418_10470309	Not Available	1011	Open in IMG/M
3300015264\|Ga0137403_10025186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6338	Open in IMG/M
3300016294\|Ga0182041_10899692	All Organisms → cellular organisms → Bacteria → Proteobacteria	796	Open in IMG/M
3300016319\|Ga0182033_10955117	All Organisms → cellular organisms → Bacteria → Proteobacteria	761	Open in IMG/M
3300016341\|Ga0182035_10163429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. 8O	1725	Open in IMG/M
3300016371\|Ga0182034_11049172	All Organisms → cellular organisms → Bacteria → Proteobacteria	705	Open in IMG/M
3300016404\|Ga0182037_10101552	Not Available	2072	Open in IMG/M
3300016422\|Ga0182039_10273328	Not Available	1387	Open in IMG/M
3300016445\|Ga0182038_11785963	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300017926\|Ga0187807_1338865	Not Available	504	Open in IMG/M
3300017970\|Ga0187783_10081751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2380	Open in IMG/M
3300017970\|Ga0187783_10251993	All Organisms → cellular organisms → Bacteria → Proteobacteria	1291	Open in IMG/M
3300017970\|Ga0187783_10558191	Not Available	829	Open in IMG/M
3300018012\|Ga0187810_10401903	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300018062\|Ga0187784_10465704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1019	Open in IMG/M
3300018085\|Ga0187772_10753483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Kingella → Kingella oralis → Kingella oralis ATCC 51147	701	Open in IMG/M
3300019265\|Ga0187792_1201698	Not Available	506	Open in IMG/M
3300019890\|Ga0193728_1273507	Not Available	660	Open in IMG/M
3300021086\|Ga0179596_10307570	Not Available	791	Open in IMG/M
3300021178\|Ga0210408_10866252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	705	Open in IMG/M
3300021402\|Ga0210385_10891788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	683	Open in IMG/M
3300021402\|Ga0210385_10915163	Not Available	674	Open in IMG/M
3300021404\|Ga0210389_10953275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	667	Open in IMG/M
3300021406\|Ga0210386_10644666	Not Available	914	Open in IMG/M
3300021420\|Ga0210394_11565471	Not Available	556	Open in IMG/M
3300021439\|Ga0213879_10107755	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300021477\|Ga0210398_11523434	Not Available	520	Open in IMG/M
3300021479\|Ga0210410_10190654	Not Available	1835	Open in IMG/M
3300021559\|Ga0210409_11083218	Not Available	676	Open in IMG/M
3300022502\|Ga0242646_1023175	Not Available	599	Open in IMG/M
3300022557\|Ga0212123_10375294	Not Available	963	Open in IMG/M
3300022726\|Ga0242654_10108393	All Organisms → cellular organisms → Bacteria → Proteobacteria	882	Open in IMG/M
3300024249\|Ga0247676_1079097	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300025916\|Ga0207663_10491414	Not Available	952	Open in IMG/M
3300025921\|Ga0207652_10322189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1395	Open in IMG/M
3300025924\|Ga0207694_11493469	Not Available	570	Open in IMG/M
3300025931\|Ga0207644_10054009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2892	Open in IMG/M
3300027610\|Ga0209528_1027632	Not Available	1254	Open in IMG/M
3300027869\|Ga0209579_10145353	All Organisms → cellular organisms → Bacteria → Proteobacteria	1263	Open in IMG/M
3300030524\|Ga0311357_11741739	Not Available	520	Open in IMG/M
3300030743\|Ga0265461_13503243	Not Available	531	Open in IMG/M
3300031128\|Ga0170823_13255409	Not Available	671	Open in IMG/M
3300031198\|Ga0307500_10045856	Not Available	1041	Open in IMG/M
3300031231\|Ga0170824_101337286	Not Available	801	Open in IMG/M
3300031236\|Ga0302324_101377196	All Organisms → cellular organisms → Bacteria → Proteobacteria	925	Open in IMG/M
3300031469\|Ga0170819_16337039	Not Available	580	Open in IMG/M
3300031474\|Ga0170818_101596896	Not Available	920	Open in IMG/M
3300031543\|Ga0318516_10315950	Not Available	902	Open in IMG/M
3300031543\|Ga0318516_10346478	All Organisms → cellular organisms → Bacteria → Proteobacteria	857	Open in IMG/M
3300031545\|Ga0318541_10091501	Not Available	1622	Open in IMG/M
3300031546\|Ga0318538_10027364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2623	Open in IMG/M
3300031546\|Ga0318538_10165575	Not Available	1172	Open in IMG/M
3300031668\|Ga0318542_10035006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2192	Open in IMG/M
3300031679\|Ga0318561_10034861	All Organisms → cellular organisms → Bacteria → Proteobacteria	2453	Open in IMG/M
3300031682\|Ga0318560_10516541	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300031713\|Ga0318496_10049903	All Organisms → cellular organisms → Bacteria	2164	Open in IMG/M
3300031719\|Ga0306917_10407142	Not Available	1062	Open in IMG/M
3300031719\|Ga0306917_11462543	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300031723\|Ga0318493_10751916	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300031740\|Ga0307468_100262981	All Organisms → cellular organisms → Bacteria → Proteobacteria	1223	Open in IMG/M
3300031747\|Ga0318502_10911636	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300031768\|Ga0318509_10811615	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300031778\|Ga0318498_10023578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2627	Open in IMG/M
3300031778\|Ga0318498_10032373	Not Available	2274	Open in IMG/M
3300031819\|Ga0318568_10052509	Not Available	2355	Open in IMG/M
3300031821\|Ga0318567_10794451	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300031845\|Ga0318511_10098330	Not Available	1242	Open in IMG/M
3300031846\|Ga0318512_10246311	Not Available	882	Open in IMG/M
3300031846\|Ga0318512_10462602	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300031879\|Ga0306919_10764312	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300031894\|Ga0318522_10395853	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300031954\|Ga0306926_11996653	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300031959\|Ga0318530_10039889	Not Available	1728	Open in IMG/M
3300031959\|Ga0318530_10161338	Not Available	913	Open in IMG/M
3300032043\|Ga0318556_10082653	Not Available	1605	Open in IMG/M
3300032066\|Ga0318514_10689011	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300032076\|Ga0306924_10132078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2848	Open in IMG/M
3300032094\|Ga0318540_10464558	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300032205\|Ga0307472_100115239	Not Available	1885	Open in IMG/M
3300032261\|Ga0306920_100726282	Not Available	1462	Open in IMG/M
3300032261\|Ga0306920_102083005	Not Available	792	Open in IMG/M
3300032515\|Ga0348332_12347770	Not Available	586	Open in IMG/M
3300032515\|Ga0348332_12826554	Not Available	1049	Open in IMG/M
3300032783\|Ga0335079_11633596	Not Available	632	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.43%
Host-Associated	Host-Associated	3.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.96%
Aquatic	Environmental → Aquatic	4.46%
Plants	Host-Associated → Plants	2.68%
Arthropoda	Host-Associated → Arthropoda	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.39%
Freshwater	Environmental → Aquatic → Freshwater	3.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.68%
Peat	Environmental → Terrestrial → Peat	1.79%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.79%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.21%
Loam	Environmental → Terrestrial → Soil → Loam	8.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.57%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.89%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.89%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.36%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.79%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.79%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022502	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10421002	3300000579	Forest Soil	GVFVILGQLLRLQGEHWWRSSLLIPYGESMANGLRTLVGEERVRRSASEQHVRL*
AP72_2010_repI_A001DRAFT_10417841	3300000893	Forest Soil	FVLLGVFVILGQLLRLQGEHWWRSSLLIPYGESMANGLRTLVGEERVRRSASEQHVRL*
JGI12694J13545_10013841	3300001166	Forest Soil	GVFVILGQLLRLDGESWWRSSHLMPYAESIAQGLRTLVGAERVPHRDVQV*
JGI12712J15308_101680802	3300001471	Forest Soil	GVFVILGQLLQLPAEGWWRHSLMIPYGESIANGLRSLVGEPHVTHTRETRT*
Ga0062389_1005129671	3300004092	Bog Forest Soil	ILAQLLRLDDEKWWRRSLLIPYGESIANGLRTMVGEERVRHTGGVTAKN*
Ga0062595_1003066311	3300004479	Soil	VILGQLLRLQGEHWWRSSLLIPYGESIANGLRTLVGEERVRHSREEHDVHV*
Ga0066823_100457072	3300005163	Soil	LLRGFVLLGVFVILGQLLRLSEEGWWRHSLLIPPGESIANGLRSVVGEPHVAHARGEVHT
Ga0066679_107363991	3300005176	Soil	GLLRGLVLLGVFVILGQLLRLQEEQWWRHSMLIPYGESMANGLRMLVGEERVRRAAGELRIRV*
Ga0070682_1018039781	3300005337	Corn Rhizosphere	LILFGVLIILGQLLRLEDERWWRQSTLIPYGESIANGLRTLVGEHPVHRGAQRL*
Ga0008090_101409332	3300005363	Tropical Rainforest Soil	LRGFVLLGVFVILGQLLRLQGEHWWRGSLLLPYGESIANGLRTIVGEERVRYSRSEEHLRV*
Ga0070713_1001766062	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VLLGVFVILGQLLRLDSERWWQHSRLLPYGESIANGLRAIIGDDRVHHRSQGASL*
Ga0070713_1007227441	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RGFVLLGVFVILAQVLRLDGERWWRQSVLMPYGESVASGLRAVVGDERTRHAGASRSTFKA*
Ga0070731_104745221	3300005538	Surface Soil	VFVILGQLLELQDERWWRQSILIPYGESIANGLRGLVGEARQPHSSEHV*
Ga0070731_105784082	3300005538	Surface Soil	LGVFVILGQLLRLQGEGWWRHSLMIPYGESMANGLRTIVGEAHVPHGRDVQI*
Ga0066670_101511812	3300005560	Soil	LGQLLKLEDEYWWSHSRLIPYGASVANGLRKLVGEPPMVVRHAGEARVRV*
Ga0066703_104344891	3300005568	Soil	GLLRGLVLLGVFVILGQLLRLPDERWWQHSMLIPYGESIANGLRMLVGEERVRRAAGELRVRF*
Ga0066656_102266992	3300006034	Soil	VFVILGQLLKLEDEYWWSHSRLIPYGASVANGLRKLVGEPPMVVRHAGEARVRV*
Ga0070765_1012184222	3300006176	Soil	VLFGVFVLLGQLLQLQGEHWWRHSMLIPYGESIANGLRAIVGEARIHPDPDEHLKT*
Ga0105241_108756702	3300009174	Corn Rhizosphere	GIVLLGVFVILAQLLKLDSERWWHKSKLIPYGESIANGLRAIAGAERVPHGNVRV*
Ga0123355_117718242	3300009826	Termite Gut	GFVLLGVFVILGQLLRLQSEHWWRSSLLIPYGESMADGLRTLVGAERVRPAGHLHVR*
Ga0126384_106215882	3300010046	Tropical Forest Soil	GQLLRLQGEHWWRGSLLIPYGESMANGLRTLVGEERVRRSASEQHVRV*
Ga0127503_104663071	3300010154	Soil	QGEHWWRGSLLIPYGESMANGLRALVGEERVRHSAADPHLRV*
Ga0126370_103810001	3300010358	Tropical Forest Soil	LLRLQGEHWWRGSLLMPYGESIANGLRTIVGEERVRYSASKEHLRV*
Ga0126383_114496831	3300010398	Tropical Forest Soil	LLRLQGEHWWRGSRRMPYGESIANGLRTIVGEERVRYSASKEHLRV*
Ga0137399_116790122	3300012203	Vadose Zone Soil	VILGQLLRLQDENWWRHSRLIPYGASIANGLRMLGGEERVRQAGDPRVRV*
Ga0137361_108572071	3300012362	Vadose Zone Soil	LGVFVILGQLLKLEDEYWWSHSRLIPYGASVANGLRKLVGEPPMVVRHAGEARVRV*
Ga0075355_10892501	3300014322	Natural And Restored Wetlands	GFLLLGVFVILGQLLRLSGESWWRHSLLIPYGESVANGLRSLVGEAHIGHARETRVHT*
Ga0137414_11882651	3300015051	Vadose Zone Soil	GAVVAARLQEEQWWRHSMLIPYGESMANGLRMLVGEERVRRAAGELRIRV*
Ga0137418_104703092	3300015241	Vadose Zone Soil	GVFVILGQLLRLEGEKWWTRSLLVPYGESVANGLRALVGEQRVKHTGGVTAKN*
Ga0137403_100251861	3300015264	Vadose Zone Soil	VLLGVFVILGQLLRLQEEQWWRHSMLIPYGESMANGLRMLVGEERVRRAAGELRIRV*
Ga0182041_108996921	3300016294	Soil	ILGQLLRLQGEHWWRGSLLMPYGESIANGLRTIVGEERVRYSRSEEHLRV
Ga0182033_109551171	3300016319	Soil	GFVLLGVFVILGQLLRLQGEHWWRGSLLLPYGESIANGLRTIVGEERVRYSRSEEHLRV
Ga0182035_101634292	3300016341	Soil	RGSLLIPYGESIANGLRTLVGEEHIVRHSSGEEYKVRV
Ga0182034_110491722	3300016371	Soil	LLRGFVLLGVFVILGQLLRLQGEHWWRGSLLMPYGESIANGLRTIVGEERVRYSRSEEHLRV
Ga0182037_101015523	3300016404	Soil	RLQGEHWWRGSLLIPYGESIANGLRTLVGEERVRHSSSEQRLRV
Ga0182039_102733281	3300016422	Soil	LRGFVLLGVFVILGQLLRLQGEHWWRGSLLMPYGESIANGLRTIVGEERVRYSRSEEHLR
Ga0182038_117859632	3300016445	Soil	FVLLGVFVILGQLLRLQGEHWWRGSLLMPYGESIANGLRTIVGEERVRYSRSEEHLRV
Ga0187807_13388651	3300017926	Freshwater Sediment	VFVILGQLLRLQGEHWWRGSLLIPYGESIANGLRTIVGEERVRYSRSEERLRV
Ga0187783_100817513	3300017970	Tropical Peatland	FGVLRGLVLLGVFVILGQLLRLQGEHWWRHSLLIPYGESIANGLRTLVGEARVYPAADERLRI
Ga0187783_102519931	3300017970	Tropical Peatland	LQGEHWWRHSLLIPYGESIANGLRTLVGEARVYPAADEHLRI
Ga0187783_105581911	3300017970	Tropical Peatland	LQGEHWWRHSLLIPYGESIANGLRTLVGEARVYPAADEHLRV
Ga0187810_104019031	3300018012	Freshwater Sediment	QGEHWWGNSLLIPYGESIANGLRTLVGEGHVPHAHDQHVRV
Ga0187784_104657043	3300018062	Tropical Peatland	LRGFVLLGVFVILGQLLRLQGEHWWRGSLLIPYGESIANGLRVLVGEGPVPHAHDRHVRV
Ga0187772_107534831	3300018085	Tropical Peatland	GQLLRLQGEHWWRNSLLLPYGESIANGLRSLVGEAQQPRGRDQHVRV
Ga0187792_12016982	3300019265	Peatland	VVLLGVFVIVGQLLRLDGERWWTRSLLIPYGESTANGLRAMVGEERVRHSR
Ga0193728_12735072	3300019890	Soil	VFVILAQLLRLDGEKWWTRSLLVPYGESVANGLRALVGEQRVRHTGGATAKN
Ga0179596_103075701	3300021086	Vadose Zone Soil	FGAFRGFVLLGVFVILGQLLRLDGEHWWRKSVLMPYGESIANGLRAVIGEERVRHAGRAVFRA
Ga0210408_108662521	3300021178	Soil	LRGCVLLGVFVILGQLLRLQGEPWWGHSTLIPYGESIANVVRTLVGAEREPAGNVRA
Ga0210385_108917881	3300021402	Soil	FVLLGVFVILGQLLQLPAEGWWRHSLMIPYGESIANGLRSLVGEPHVAHTRETRT
Ga0210385_109151631	3300021402	Soil	FRGFVLLGVFVILGQLLRLDGEHWWRKSVLMPYGESIANGLRAVVGDHGERHASSGLTFKGG
Ga0210389_109532751	3300021404	Soil	VILGQLLRLQEEPWWRHSMLIPYGESIANGLRMLVGEERVRRAGDLRVRV
Ga0210386_106446661	3300021406	Soil	FRGFVLLGVFVILGQLLRLDGEHWWRKSVLMPYGESIANGLRAVVGDERVRHASSNRPVSRA
Ga0210394_115654711	3300021420	Soil	FVLLGVFVILGQLLRLDGEHWWRKSVLMPYGESIANGLRAVVGDHGERHASSGLTFKGG
Ga0213879_101077551	3300021439	Bulk Soil	GVFVILGQLLELQDGQWWRHSMLMPYGESIANGLRALVGEHRVAHGHAEPV
Ga0210398_115234341	3300021477	Soil	GVFVILGQLLRLDGEHWWRKSVLMPYGESIANGLRAVVGDHGERHASSGLTFKGG
Ga0210410_101906541	3300021479	Soil	GVFVILGQLLRLQEEQWWRHSMLIPYGESMANGLRMLVGEERVRRAGDLRVRV
Ga0210409_110832182	3300021559	Soil	ILGQLLRLQDETWWRHSMLIPYGESIANGLRVLVGEERVPHTADARVQT
Ga0242646_10231752	3300022502	Soil	AFRGFVLLGVFVILGQLLRLDGEHWWRKSVLMPYGESIANGLRAVVGDHGERHASSGLTFKGG
Ga0212123_103752942	3300022557	Iron-Sulfur Acid Spring	LRGMVLLGVFVILAQLLQLQGERWWRESILIPYGETVANGLRLLVGEARARSGEQA
Ga0242654_101083932	3300022726	Soil	FVLLGVFVILGQLLRLQGEHWWRGSLLIPYGESMANGLRGLVGEERVRHSAADPHLRV
Ga0247676_10790972	3300024249	Soil	QLLRLQGEHWWRGSLLIPYGESMANGLRTLVGEERVRRSASEQHVRV
Ga0207663_104914142	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	FVLLGVFVILGQLLRLQGEHWWRYSLLIPYGESIANGLRTLVGEERVRHSSEEHNVHA
Ga0207652_103221891	3300025921	Corn Rhizosphere	GVLRAMVLVGVFVMLGQLLRLQEEPWWRQSLLVPYGESLANGLRTVVGEQRLHLPPRRIS
Ga0207694_114934691	3300025924	Corn Rhizosphere	FRGFVLLGVFVILAQVLRLDGERWWRQSVLMPYGESIANGLRAVVGDDRTRHAGAGRSAFKV
Ga0207644_100540093	3300025931	Switchgrass Rhizosphere	VFVILGQLLRLSEEGWWRHSLLIPHGESIANGLRSVVGEPHVAHARGEVRT
Ga0209528_10276321	3300027610	Forest Soil	VFVILGQLLRLQEEQWWRHSMLIPYGESMANGLRMLVGEERVRRAASELRLRV
Ga0209579_101453532	3300027869	Surface Soil	VLLGVFVILGQLLRLQGEGWWRHSLMIPYGESMANGLRTIVGEAHVPHGRDVQI
Ga0311357_117417392	3300030524	Palsa	VLRGIVLLGVFVILGQLLQLQGEQWWRHSLLIPYGESVANGLRTLVGEARVHVAPDEHVR
Ga0265461_135032431	3300030743	Soil	GVLRGFVLLGVCVILGQLLRLQEENWWRHSMLIPYGESIANGLRMLVGEERVRRVAGELRVRV
Ga0170823_132554092	3300031128	Forest Soil	VFFILWQLLRLDGEHWWRKSVLMPYGESIANGLRAVVGDHGERHASSDRGLTFKGG
Ga0307500_100458562	3300031198	Soil	LLRGVVLLGVFVILGQLLHLDGDKWWTRSLLIPYGESVANGLRALVGEQRVRHSGGVSAK
Ga0170824_1013372861	3300031231	Forest Soil	GVFVILGQLLRLEGERWWTRSLLIPYGESVANGLRALVGEPRGPRHTGGAAAKN
Ga0302324_1013771961	3300031236	Palsa	VLLGVFVILGQLLQLQGEQWWRHSLLIPYGESVANGLRTLVGEARVHVAPDEHVRV
Ga0170819_163370392	3300031469	Forest Soil	FVLLGVFVILAQVLRLDGERWWRQSVLMPYGESVASGLRAVIGDDRTRHARASRLAFKV
Ga0170818_1015968961	3300031474	Forest Soil	LLRGVVLLGVFVILGQLLRLEGERWWTRSLLIPYGESVANGLRALVGEPRGPRHTGGAAAKN
Ga0318516_103159501	3300031543	Soil	GVFVILGQLLRLQGEHWWRGSLLIPYGESMANGLRTLVGEERVRRSASEQHVRV
Ga0318516_103464781	3300031543	Soil	FVLLGVFVILGQLLRLQGEHWWRGSLLIPYGESIANGLRTLVGEERVRHSSSEQRLRV
Ga0318541_100915011	3300031545	Soil	RGFVLLGVFVILGQLLRLQGEHWWRGSLLIPYGESIANGLRTIVGEERVRYSRSEEHLRV
Ga0318538_100273641	3300031546	Soil	LGQLLRLQGEHWWRGSLLIPYGESIANGLRTIVGEERVRYSRSDEHLRV
Ga0318538_101655751	3300031546	Soil	EHWWRGSLLIPYGESIANGLRTIVGEERVRYSRSEEHPRV
Ga0318542_100350063	3300031668	Soil	GLLRGFVLLGVFVILGQLLRLQGEHWWRGSLLIPYGESMANGLRTLVGEERVRRSASEQHVRV
Ga0318561_100348614	3300031679	Soil	LLRLQGEHWWRGSLLIPYGESIANGLRTIVGEERVRYSRSEEHPRV
Ga0318560_105165412	3300031682	Soil	GLLRGFVLLGVFVILGQLLRLQGEHWWRGSLLIPYGESIANGLRTLVGEEHSVRHSSEEHRVRV
Ga0318496_100499032	3300031713	Soil	VLLGVFVILGQLLRLQGEHWWRGSLLIPYGESIANGLRTLVGEEHVRQSSSEEHLRV
Ga0306917_104071421	3300031719	Soil	LLRGFVLLGVFVILGQLLRLQGEHWWRGSLLLPYGESIANGLRTIVGEERVRYSRSEEHLRV
Ga0306917_114625432	3300031719	Soil	FVLLGVFVILGQLLRLEGEHWWRGSLLIPYGESMANGLRTLVGEEHVRQAGEQHARA
Ga0318493_107519162	3300031723	Soil	LVRGLVLLGVFVILGQLLRLEGERWWAGSLLIPYGESMANGLRTLVGEERVRHASGEQHTRV
Ga0307468_1002629811	3300031740	Hardwood Forest Soil	RGFVLLGVFVILGQLLQLQGERWWGRSVLIPYGESIANGLRVIVGAERVPHGHVRV
Ga0318502_109116361	3300031747	Soil	WWRGSLLIPYGESIANGLRTLVGEERVRYSRSEEHLRV
Ga0318509_108116152	3300031768	Soil	GQLLRLQGEHWWRGSLLIPYGESMANGLRTLVGEERVRRSASEQHVRV
Ga0318498_100235783	3300031778	Soil	QGEHWWRGSLLIPYGESIANGLRTLVGEERVRHSSSEQRLRV
Ga0318498_100323733	3300031778	Soil	EHWWRGSLLIPYGESIANGLRTLVGEERVRYSRSEEHLRV
Ga0318568_100525091	3300031819	Soil	LRLQGEHWWRGSLLIPYGESIANGLRTLVGEEHIVRHSSGEEHKVRV
Ga0318567_107944512	3300031821	Soil	ILGQLLRLQGEHWWRGSLLIPYGESMANGLRTLVGEERVRRSASEQHVRV
Ga0318511_100983302	3300031845	Soil	FVLLGVFVILGQLLRLQGEHWWRGSLLIPYGESIANGLRTIVGEERVRYSRSEEHPRV
Ga0318512_102463112	3300031846	Soil	VFVILGQLLRLQGEHWWRGSLLIPYGESIANGLRTLVGEERVRYSRSEEHLRV
Ga0318512_104626022	3300031846	Soil	GFVLLGVFVILGQLLRLQGEHWWRGSLLIPYGESIANGLRTLVGEERVRHSSSEQRLRV
Ga0306919_107643121	3300031879	Soil	LRLQGEHWWRGSLLIPYGESIANGLRTLVGEEHIVRHSSGEEYKVRV
Ga0318522_103958532	3300031894	Soil	LRLQGEHWWRGSLLIPYGESMANGLRTLVGEERVRRSASEQHVRV
Ga0306926_119966532	3300031954	Soil	ILGQLLRLQGEHWWRGSLLIPYGESIANGLRTLVGEEHVRQSSSEEHLRV
Ga0318530_100398892	3300031959	Soil	LQGEHWWRGSLLIPYGESIANGLRTLVGEEHIVRHSSGEEHKVRV
Ga0318530_101613382	3300031959	Soil	WWRGSLLLPYGESIANGLRTIVGEERVRYSRSEEHLRV
Ga0318556_100826532	3300032043	Soil	GLLRGFVLLGVFVILGQLLRLQGEHWWRGSLLMPYGESIANGLRTIVGEERVRYSRSEEHLRV
Ga0318514_106890111	3300032066	Soil	VFVILGQLLRLQGEHWWRGSLLIPYGESMANGLRTLVGEERVRRSASEQHVRV
Ga0306924_101320781	3300032076	Soil	GFVLLGVFVILGQLLRLQGEHWWRGSLLIPYGESIANGLRTLVGEEHSVRHSSEEHRVRV
Ga0318540_104645581	3300032094	Soil	QLLRLQGEHWWRGSLLIPYGESIANGLRTIVGEERVRYSRSDEHLRV
Ga0307472_1001152393	3300032205	Hardwood Forest Soil	LLRLQGEHWWRGSLLIPYGESMANGLRALVGEERVRHSAADRHLRV
Ga0306920_1007262822	3300032261	Soil	VILGQLLRLQGEHWWRGSLLIPYGESMANGLRTLVGEERVRRSASEQHVRV
Ga0306920_1020830051	3300032261	Soil	FVILGQLLRLQGEHWWRGSLLIPYGESIANGLRTLVGEERVRYSRSEEHPRV
Ga0348332_123477702	3300032515	Plant Litter	GAFRGFVLLGVFVILGQLLRLDGEHWWRKSVLMPYGESIANGLRAVIGDERVRHASSDHRVSEPNV
Ga0348332_128265542	3300032515	Plant Litter	RGFVLLGVFVILGQLLRLDGEHWWRKSVLMPYGESIANGLRAVIGDQRIRNASDRAVSEASKPA
Ga0335079_116335962	3300032783	Soil	VFVILGQLLRLDGEKWWHRSLLIPYGESVANGLRAMVGEPTVRHSGGITAKN

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084480

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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