NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F084496

Metagenome / Metatranscriptome Family F084496

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084496
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 65 residues
Representative Sequence DVIGSSCATAEDFAAAIRLVAANRAAIANVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN
Number of Associated Samples 104
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.83 %
% of genes near scaffold ends (potentially truncated) 94.64 %
% of genes from short scaffolds (< 2000 bps) 93.75 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.857 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(23.214 % of family members)
Environment Ontology (ENVO) Unclassified
(18.750 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.893 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.00%    β-sheet: 0.00%    Coil/Unstructured: 60.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF13458Peripla_BP_6 58.93
PF02653BPD_transp_2 0.89


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.86 %
UnclassifiedrootN/A7.14 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004092|Ga0062389_104245579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium539Open in IMG/M
3300004635|Ga0062388_102096676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia587Open in IMG/M
3300005436|Ga0070713_101418643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia673Open in IMG/M
3300005437|Ga0070710_11306399All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300005439|Ga0070711_101134350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria674Open in IMG/M
3300005454|Ga0066687_10940565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria515Open in IMG/M
3300005455|Ga0070663_100022069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00594248Open in IMG/M
3300005538|Ga0070731_10874404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia596Open in IMG/M
3300005541|Ga0070733_11172263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia515Open in IMG/M
3300005546|Ga0070696_101193887All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300005564|Ga0070664_100912937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria824Open in IMG/M
3300005602|Ga0070762_11214823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia522Open in IMG/M
3300005921|Ga0070766_10097282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1737Open in IMG/M
3300006102|Ga0075015_100589648All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria649Open in IMG/M
3300006176|Ga0070765_100597407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1040Open in IMG/M
3300006176|Ga0070765_100866789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria853Open in IMG/M
3300006804|Ga0079221_10963918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria635Open in IMG/M
3300009011|Ga0105251_10132053All Organisms → cellular organisms → Bacteria1131Open in IMG/M
3300009012|Ga0066710_103734857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia572Open in IMG/M
3300009148|Ga0105243_10160301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1939Open in IMG/M
3300009176|Ga0105242_11420641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia722Open in IMG/M
3300009521|Ga0116222_1314411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia677Open in IMG/M
3300009522|Ga0116218_1340625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia670Open in IMG/M
3300009524|Ga0116225_1260563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia777Open in IMG/M
3300009525|Ga0116220_10460905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia573Open in IMG/M
3300009698|Ga0116216_10734975All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia592Open in IMG/M
3300009700|Ga0116217_10683337All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia636Open in IMG/M
3300010043|Ga0126380_10741708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia795Open in IMG/M
3300010147|Ga0126319_1165054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia639Open in IMG/M
3300010325|Ga0134064_10202521All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia713Open in IMG/M
3300010335|Ga0134063_10238748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia863Open in IMG/M
3300010360|Ga0126372_11425992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia726Open in IMG/M
3300010361|Ga0126378_10263516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1820Open in IMG/M
3300010361|Ga0126378_12648877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia573Open in IMG/M
3300010371|Ga0134125_11953023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia638Open in IMG/M
3300010379|Ga0136449_101879253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia891Open in IMG/M
3300012207|Ga0137381_11020611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia713Open in IMG/M
3300012494|Ga0157341_1005470All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia954Open in IMG/M
3300012961|Ga0164302_11450682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia563Open in IMG/M
3300013104|Ga0157370_10867307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia820Open in IMG/M
3300013307|Ga0157372_12225521All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia630Open in IMG/M
3300014166|Ga0134079_10126956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1004Open in IMG/M
3300014968|Ga0157379_10711101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia943Open in IMG/M
3300014968|Ga0157379_12445391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia522Open in IMG/M
3300015242|Ga0137412_10102324All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00592327Open in IMG/M
3300016319|Ga0182033_11054228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia725Open in IMG/M
3300016319|Ga0182033_11828544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia551Open in IMG/M
3300016387|Ga0182040_10908949All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia730Open in IMG/M
3300016404|Ga0182037_10233627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1446Open in IMG/M
3300017823|Ga0187818_10133590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1077Open in IMG/M
3300017926|Ga0187807_1292997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia539Open in IMG/M
3300017928|Ga0187806_1094145All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300017942|Ga0187808_10433350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia604Open in IMG/M
3300017959|Ga0187779_10848419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia626Open in IMG/M
3300018060|Ga0187765_10802964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia628Open in IMG/M
3300018085|Ga0187772_10384263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia975Open in IMG/M
3300018086|Ga0187769_11175499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia580Open in IMG/M
3300020078|Ga0206352_10407386All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia705Open in IMG/M
3300020080|Ga0206350_11146937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia736Open in IMG/M
3300020583|Ga0210401_11114959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia647Open in IMG/M
3300021088|Ga0210404_10434318All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia737Open in IMG/M
3300021180|Ga0210396_11174040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia643Open in IMG/M
3300021374|Ga0213881_10062921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1579Open in IMG/M
3300021403|Ga0210397_10811289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia722Open in IMG/M
3300021404|Ga0210389_10393592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1089Open in IMG/M
3300021406|Ga0210386_10828138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia794Open in IMG/M
3300021406|Ga0210386_11381529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia590Open in IMG/M
3300021474|Ga0210390_10460691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1072Open in IMG/M
3300021478|Ga0210402_11730662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia551Open in IMG/M
3300021479|Ga0210410_11228137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia641Open in IMG/M
3300022467|Ga0224712_10396383All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia657Open in IMG/M
3300025735|Ga0207713_1187564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia642Open in IMG/M
3300025915|Ga0207693_11345052All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia532Open in IMG/M
3300025920|Ga0207649_10193449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1432Open in IMG/M
3300025928|Ga0207700_10309433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1366Open in IMG/M
3300025928|Ga0207700_12029098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia502Open in IMG/M
3300025929|Ga0207664_11349387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia633Open in IMG/M
3300025944|Ga0207661_11476191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia623Open in IMG/M
3300026377|Ga0257171_1016613All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1229Open in IMG/M
3300026550|Ga0209474_10419833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia689Open in IMG/M
3300027029|Ga0208731_1000278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3057Open in IMG/M
3300027889|Ga0209380_10289608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia962Open in IMG/M
3300028906|Ga0308309_11322049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia619Open in IMG/M
3300030730|Ga0307482_1048274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1026Open in IMG/M
3300030741|Ga0265459_13931223Not Available521Open in IMG/M
3300031090|Ga0265760_10187091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia694Open in IMG/M
3300031543|Ga0318516_10628968All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia612Open in IMG/M
3300031546|Ga0318538_10179504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1126Open in IMG/M
3300031719|Ga0306917_10062782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2545Open in IMG/M
3300031723|Ga0318493_10715008Not Available562Open in IMG/M
3300031747|Ga0318502_10787756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia576Open in IMG/M
3300031770|Ga0318521_10999905Not Available513Open in IMG/M
3300031778|Ga0318498_10456493All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium565Open in IMG/M
3300031781|Ga0318547_10818839Not Available580Open in IMG/M
3300031820|Ga0307473_10742854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia694Open in IMG/M
3300031823|Ga0307478_10994954All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia701Open in IMG/M
3300031912|Ga0306921_12232476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium576Open in IMG/M
3300031941|Ga0310912_10824658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia716Open in IMG/M
3300031941|Ga0310912_11541428Not Available500Open in IMG/M
3300031946|Ga0310910_11007614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia651Open in IMG/M
3300031954|Ga0306926_11941357All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300032035|Ga0310911_10626795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia624Open in IMG/M
3300032055|Ga0318575_10563530All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia578Open in IMG/M
3300032065|Ga0318513_10484580All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia605Open in IMG/M
3300032160|Ga0311301_11835182All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia719Open in IMG/M
3300032261|Ga0306920_103014658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia635Open in IMG/M
3300032770|Ga0335085_11826066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia622Open in IMG/M
3300032770|Ga0335085_12192913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia555Open in IMG/M
3300034163|Ga0370515_0062564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1626Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil23.21%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil7.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.14%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.25%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.36%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.57%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.68%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.79%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.79%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.79%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.89%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.89%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.89%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.89%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.89%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.89%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012494Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610Host-AssociatedOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017926Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025735Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027029Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062389_10424557923300004092Bog Forest SoilIRPGAFPEKEIDVVGSSCATAEDFRTAINLVRANRASLAALFSHHFPLTRTAEAFEFAMNRPPDAIKVLVTVD*
Ga0062388_10209667613300004635Bog Forest SoilATAEDFRAAISLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVNKGHELKP*
Ga0070713_10141864313300005436Corn, Switchgrass And Miscanthus RhizosphereDVLGSSCATAGDFAQAIRLVAANRTALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN*
Ga0070710_1130639923300005437Corn, Switchgrass And Miscanthus RhizosphereLGSSCATAGDFAQAIRLVAANRTALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN
Ga0070711_10113435023300005439Corn, Switchgrass And Miscanthus RhizosphereEIDVLGSSTATAADFRYAISLVISARENISKLFSHHFPLARAAEAFEFAMSRPPDAVKIVVNVN*
Ga0066687_1094056513300005454SoilEKEIDVIGSSCATAEDFAAAIRLVTASRAAIAHVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN*
Ga0070663_10002206953300005455Corn RhizosphereRSGAFPEKEIDVLGSSCATAGDFAQAIRLVAANRPALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN*
Ga0070731_1087440413300005538Surface SoilSGTAPLRPGAFPEKEIDVIGSSCATADDFRTAIRLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN*
Ga0070733_1117226313300005541Surface SoilKEIDVIGSSCATAEDFRNAVRLVSAHSASLSALFSHHFPLERAAEAFEFAMRRPQDAIKIVVTVN*
Ga0070696_10119388713300005546Corn, Switchgrass And Miscanthus RhizosphereSSCATAGDFAQAIRLVAANRPALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN*
Ga0070664_10091293723300005564Corn RhizosphereTAADFRYAISLVISARENISKLFSHHFPLARAAEAFEFAMSRPPDAVKIVVNVN*
Ga0070762_1121482313300005602SoilAEDFLHAISLVSANRASLAEIFSHHFPLDRTADAFKFAMSRPPDALKIVINVN*
Ga0070766_1009728213300005921SoilAPLRPGAFPEKEIDVLGSSCATAEDFRAAISLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN*
Ga0075015_10058964823300006102WatershedsRPGAFPEKEIDVIGSSCATAEDFAEAIRLVAANRAALATVFSHHFPLARRAEAFEFAMSRPPDAIKIVVTVN*
Ga0070765_10059740713300006176SoilATATDFRDAITLVAANRAAVAALFSHHFPLVRAAEAFEFAMSRPPDAMKIVVTVN*
Ga0070765_10086678923300006176SoilGAFPEKEIDVIGSSCATAEDFAAAIRLVAANRAAIAHVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN*
Ga0079221_1096391823300006804Agricultural SoilAFPEKEIDVIGSSCATAEDFAAAIRLVAANRAAIAHVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN*
Ga0105251_1013205323300009011Switchgrass RhizosphereEKEIDVLGSSCATAGDFAEAIRLVAANRAALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN*
Ga0066710_10373485713300009012Grasslands SoilPLRSGAFPEKEIDVIGSSCATAEDFAAAIRLVVANRAAIAHVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN
Ga0105243_1016030133300009148Miscanthus RhizosphereGTAPMRSGAFPEKEIDVLGSSCATAGDFAQAIRLVAANRTALAPVFSHHFPLVRAAEAFAFAMSRPPDAIKIVVTVN*
Ga0105242_1142064123300009176Miscanthus RhizosphereFPEKEIDVLGSSCATAGDFAEAIRLVAANRSALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN*
Ga0116222_131441113300009521Peatlands SoilIDVIGSSCATADDFRAAIKLIAANRAAVTALFSHHFPLARAPEAFEFAMSRPPDAIKIVVTVN*
Ga0116218_134062513300009522Peatlands SoilSCATADDFRAAIKLIAANRAAVTALFSHHFPLARAPEAFEFAMSRPPDAIKIVVTVN*
Ga0116225_126056313300009524Peatlands SoilDVLGSSCATAEDFLNAVHLVSANRASLAAIFSHHFPLTRAAEAFEFAMSRPPDAIKIVVTVN*
Ga0116220_1046090513300009525Peatlands SoilDVIGSSCATADDFRAAIKLIAANRAAVTALFSHHFPLARAPEAFEFAMSRPPDAIKIVVTVN*
Ga0116216_1073497513300009698Peatlands SoilSCATAEDFRNAVRLVSAHSASLTALFSHHFPLERAAEAFEFAMRRPQDAIKIVVTVN*
Ga0116217_1068333723300009700Peatlands SoilVRPGAFPEKEIDVIGSSCATAADFRDAIKLVAANRPAISALFSHHFPLTRAAEAFAFAMSKPPDAIKIVVTVN*
Ga0126380_1074170813300010043Tropical Forest SoilPGAFPEKEIDVIGSSCATAADFGEVISLVAANRSAIAQVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN*
Ga0126319_116505413300010147SoilEKEIDVIGSSCATGEDFAAAIRLVAANRAAIAHVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN*
Ga0134064_1020252123300010325Grasslands SoilCATAEDFAAAIRLVAASRAAIAPVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN*
Ga0134063_1023874823300010335Grasslands SoilCATAEDFAAAIRLVAANRAAISHVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN*
Ga0126372_1142599233300010360Tropical Forest SoilEKEIDVIGSSCAIAEDFRAAINLVKANRVSLAEIFSHHFPLTRAAEAFEFAMNRSPDAIKIVVTVH*
Ga0126378_1026351623300010361Tropical Forest SoilVGICGSSCATAADFGEAIRLVLANRAAMANLFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN*
Ga0126378_1264887713300010361Tropical Forest SoilCATAADFGEAISLVAANRSAIAQVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN*
Ga0134125_1195302313300010371Terrestrial SoilAFPEKEIDVLGSSCATAGDFAQAIRLVAANRPALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN*
Ga0136449_10187925313300010379Peatlands SoilIDVLGSSCATAEDFLNAVHLVSANRASLAALFSHHFPLTRAAEAFEFAMNRPPDAIKIVVTVN*
Ga0137381_1102061113300012207Vadose Zone SoilDVIGSSCATAEDFAAAIRLVAANRAAIANVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN*
Ga0157341_100547013300012494Arabidopsis RhizospherePEKEIDVLGSSCATAGDFAQAIRLVAASRPALAPVFSHHFPLARAAEAFAFAMSGPPDAIKIVVTVN*
Ga0164302_1145068213300012961SoilVIGSSCATADDFVAAIRLVAANRAAIAHVFSHHFPLARAAEAFELAMSRPPDAIKIVVTVN*
Ga0157370_1086730713300013104Corn RhizosphereSGAAAPLKEAFPEKEIDVLGSSCATAGDFAQAIRLVAANRPALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN*
Ga0157372_1222552113300013307Corn RhizosphereCATAGDFAQAIRLVAANRTALAPVFSHHFPLVRAAEAFAFAMSRPPDAIKIVVTVN*
Ga0134079_1012695613300014166Grasslands SoilTAEDFAAAIRLVTASRAAIAHVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN*
Ga0157379_1071110123300014968Switchgrass RhizosphereSSGTAPLRSGAFPEKEIDVIGSSCATADDFAAAIRLVGAYRAALAPVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN*
Ga0157379_1244539113300014968Switchgrass RhizosphereKEIDVIGSSCATAEDFAAAIRLVAANRTAIAHVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN*
Ga0137412_1010232433300015242Vadose Zone SoilKEIDVLGSSCATAGDFAQAIRLVAANRSALAPVFSHHFPLARAAEAFEFAMSRPPDAVKIVVTVN*
Ga0182033_1105422823300016319SoilIGSSCATAGDFQAAINLVQANRGSLAAIFSHHFPLTSTAEAFEFAMNRPPDAIKIVVTVN
Ga0182033_1182854423300016319SoilPEKEIDVIGSSCATAADFGAAVRLVVANRAALAQLFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN
Ga0182040_1090894923300016387SoilGSSCATAEDFQAAISLVKANRASLAAIFSHHFPLTRAAEAFEFAMNRPPDAIKIVVTVN
Ga0182037_1023362723300016404SoilCATAEDFLTAARLVSANRASLVAIFSHHFPLTRAAEAFEFAMNRPPDAIKIVVTVN
Ga0187818_1013359023300017823Freshwater SedimentSAAAPIRPGVFPEKEIDVIGSSCATAEDFLNAVRLVSANRASLAALFSHHFPLTRAADAFKFAMNRPPDAIKIVVTVN
Ga0187807_129299713300017926Freshwater SedimentKEIDVIGSSCATAEDFQAAINLVSANRASLGALFSHHFPLTRAAEAFEFARSRSPDAIKIVVTVNQTSN
Ga0187806_109414523300017928Freshwater SedimentVFPEKEIDVIGSSCATAEDFQAAINLVSANRASLGALFSHHFPLTRAAEAFEFARSRSPDAIKIVVTVNQTSN
Ga0187808_1043335013300017942Freshwater SedimentSSCATAEDFLNAVRLVSANRACIAALFSHHFPLARTAEAFEFAMSRPQDAVKIVVTVNLGQLKTHRPEGER
Ga0187779_1084841913300017959Tropical PeatlandRPGAFPEKEIDVIGSSCATAEDFRNAIRLVSANRASLTALFSHHYPLSRTAEAFEFAMKRPPDAIKIVVTVN
Ga0187765_1080296413300018060Tropical PeatlandEKEIDVIGSSCATAADFGAAIRLVVACRAAISHLFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN
Ga0187772_1038426313300018085Tropical PeatlandAFPEKEIDVIGSSCATAEDFLDAVRLVSANRACIAALFSHHFPLARTAEAFEFAMSRPQDAVKIVVTVNLGQLNTHRPEGER
Ga0187769_1117549923300018086Tropical PeatlandCATAEDFLNAVGLVSANRASLAAIFSHHFPLARAADAFKFAMNRPPDAIKIVVTVN
Ga0206352_1040738623300020078Corn, Switchgrass And Miscanthus RhizosphereEIDVLGSSCATAGDFAQAIRLVAANRPALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN
Ga0206350_1114693723300020080Corn, Switchgrass And Miscanthus RhizosphereFPEKEIDVLGSSCATAGDFAQAIRLVAANRPALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN
Ga0210401_1111495923300020583SoilAPLRPGAFPEKEIDVLGSSCATAEDFRAAISLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN
Ga0210404_1043431823300021088SoilAEDFRAAISLVKANRASLAALFSHHFPLTRAGEAFEFAMKRRPPDAIKIVVTVN
Ga0210396_1117404013300021180SoilVLGSSCATAEDFRTAISLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTV
Ga0213881_1006292123300021374Exposed RockVTAVDFRDAISLVAGARENISKLFSHHFPLARAAEAFEFAMSRPPDAVKIVVKVN
Ga0210393_1036027723300021401SoilDFRAAISLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN
Ga0210397_1081128913300021403SoilMSSGTAPLRPGAFPEKEIDVLGSSCAIAEDFRTAISLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN
Ga0210389_1039359223300021404SoilGMSSGTAPLRPGAFPEKEIDVLGSSCAIAEDFRTAISLVKATRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN
Ga0210386_1082813823300021406SoilIDVLGSSCATAEDFRAAISLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN
Ga0210386_1138152913300021406SoilAEDFRAAISLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN
Ga0210390_1046069123300021474SoilEKEIDVLGSSCATAEDFRAAISLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN
Ga0210402_1173066223300021478SoilSGTARVRPGAFPEKEIDVIGSSCATAEDFAEAIRLVAANRAALANVFSHHFPLARTAEAFEFAMSRPPDAIKIVVTVN
Ga0210410_1122813713300021479SoilVAEDFRTAISLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN
Ga0224712_1039638313300022467Corn, Switchgrass And Miscanthus RhizosphereAPLRSGAFPEKEIDVLGSSCATAGDFAQAIRLVAANRPALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN
Ga0207713_118756413300025735Switchgrass RhizosphereTAGDFAQAIRLVAANRPALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN
Ga0207671_1030623823300025914Corn RhizosphereAGDFAQAIRLVAANRPALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN
Ga0207693_1134505223300025915Corn, Switchgrass And Miscanthus RhizosphereCATAGDFAQAIRLVAANRPALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN
Ga0207649_1019344923300025920Corn RhizosphereLSSGTAPLRSGAFPEKEIDVLGSSCATAGDFAQAIRLVAANRTALAPVFSHHFPLVRAAEAFAFAMSRPPDAIKIVVTVN
Ga0207700_1030943323300025928Corn, Switchgrass And Miscanthus RhizosphereRSGAFPEKEIDVLGSSCATAGDFAQAIRLVAANRTALAPVFSHHFPLVRAAEAFAFAMSRPPDAIKIVVTVN
Ga0207700_1202909813300025928Corn, Switchgrass And Miscanthus RhizosphereTAADFRDAISLVAANRQEIAKIFSHHFPLARAAEAFEFAMSRPPDAVKVVVTMNGRDN
Ga0207664_1134938713300025929Agricultural SoilATAGDFAQAIRLVAANRPALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN
Ga0207644_1038082813300025931Switchgrass RhizosphereAGDFAQAIRLVAANRPVLAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN
Ga0207661_1147619123300025944Corn RhizosphereLGSSTATAADFRYAISLVISARENISKLFSHHFPLARAAEAFEFAMSRPPDAVKIVVNVN
Ga0257171_101661313300026377SoilPEKEIDVIGSSCATAEDFAAAIRLVAANRAAIAHVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN
Ga0209474_1041983323300026550SoilEIDVLGSSCATAGDFAEAIRLVAANRPALAPVFSHHFPLARAAEAFAFAMSRPPDAIKIVVTVN
Ga0208731_100027843300027029Forest SoilSSGTAPLRPGAFPEKEIDVLGSSCAVAEDFRTAINLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN
Ga0209380_1028960813300027889SoilSCATAEDFRAAISLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN
Ga0308309_1132204923300028906SoilLSSGRRRWVSAEDFRTAITLVKANRASLAALFSHHFPLARAGEAFEFAMKRPPDAIKIVVTVN
Ga0307482_104827413300030730Hardwood Forest SoilVLGSSCATAEDFRTAIDLVKANRACIAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTV
Ga0265459_1393122323300030741SoilCATAEDFRNAINLVRANRASLAALFSHHFPLARAAEAFEFAMNRPPDAIKILVTVN
Ga0265760_1018709123300031090SoilEKEIDVLGSSCATAEDFRAAITLVKANQKSLAALYSHHFPLTRASEAFEFAMKRPPDAIKIMVTVN
Ga0318516_1062896813300031543SoilEIDVIGSSCATAGDFQAAINLVQANRGSLAAIFSHHFPLTSTAEAFEFAMNRPPDAIKIVVTVN
Ga0318538_1017950423300031546SoilIDVIGSSCATAADFAAAIRLVVASRADIAQLFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN
Ga0306917_1006278213300031719SoilKEIDVIGSSCATAEDFQAAINLVRPNRASLAAIFSHHFPLTRTAEAFEFAMNRPPDAIKIMVTVN
Ga0318493_1071500823300031723SoilSSDTVPVRPGVFPAKEIDVIGSSCATAEDFQIAINLVKANRASLGAIFSHHFPLTRAAEAFAFAMNRPPDAIKIVVTVNLARN
Ga0318502_1078775623300031747SoilGSSCATAADFAAAIRLVVASRADIAQLFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN
Ga0318521_1099990523300031770SoilATAGDFSNAIRLVAASRAANRTAMAALFSHHFPLARAAEAFAFALSRPPDAIKIVVTVT
Ga0318498_1045649313300031778SoilFPEKEIDVIGSSCATAGDFRDAIRLVAASRAASRTAMAALFSHHFPLTRAAEAFAFALSRPPDAIKIVVTVN
Ga0318547_1081883913300031781SoilVFPEKEIDVIGSSCATAEDFQAAINLVKANRASLAAIFSHHFPLTRAAEAFEFAMNRPPDAIKIVVTVNLASN
Ga0307473_1074285423300031820Hardwood Forest SoilAADFGAAISLVAANRSAVAHVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN
Ga0307478_1099495423300031823Hardwood Forest SoilRPGAFPEKEIDVLGSSCATAEDFRAAIGLVKANRASLAALFSHHFPLTRAGEAFEFAMKRPPDAIKIVVTVN
Ga0306921_1223247623300031912SoilRPGAFPEKEIDVIGSSCATAGDFRDAIRLVAASRAASRTAMAALFSHHFPLTRAAEAFAFALSRPPDAIKIVVTVN
Ga0310912_1082465823300031941SoilIDVIGSSCATAEDFQAAINLVSANRASLAAIFSHHFPLTRAAEAFEFAMKRPPDAIKIVVTVN
Ga0310912_1154142813300031941SoilGVFPAKEIDVIGSSCATAEDFLAAINLVKANRASLGAIFSHHFPLTRAAEAFEFAMNRPPDAIKIVVTVNLASN
Ga0310910_1100761423300031946SoilEKEIDVIGSSCATAADFGEAINLVAANRSAIAQLFSHHFLLDRAAEAFEFAMSRPPDAMKIVVTVN
Ga0306926_1194135723300031954SoilSGTAPVRPGAFPEKELDVIGSSCATAAEFGQAIRLVAACRAALAQVFSHHFPLARAAEAFDFAMSRPPDAIKIVVTVN
Ga0310911_1062679523300032035SoilVIGSSCATAEDFQAAINLVRANRASLAAIFSHHFPLTRAAEAFEFAMNRPPDAIKIVVTV
Ga0318575_1056353023300032055SoilIGASCATAADFSAAIRLVADCRGAVSHLFSHHFPLARAAEAFEFAMSRPPDAIKLVVTVN
Ga0318513_1048458013300032065SoilPEKEIDVIGSSCATAGDFSNAIRLVAASRAANRTAMAALFSHHFPLARAAEAFAFALSRPPDAIKIVVTVT
Ga0311301_1183518213300032160Peatlands SoilSCATAEDFLNAVRLVSVNRAALAALFSHHFPLARAADAFTFAMNRPPDAIKVVVTVN
Ga0306920_10301465813300032261SoilASCATAADFSAAIRLVADCRGAVSHLFSHHFPLARAAEAFEFAMSRPPDAIKLVVTVN
Ga0335085_1182606623300032770SoilSGTAPVRPGAFPEKEIDVIGSSCATAGDFGDAIRLVAASRAANPTAMAALFSHHFPLTRAAEAFAFAMSRPPDAIKIVVSVN
Ga0335085_1219291323300032770SoilPGDSERKELDVIGSSCATAADFGEAIRLVASCRAALAQVFSHHFPLARAAEAFEFAMSRPPDAIKIVVTVN
Ga0370515_0062564_2_1873300034163Untreated Peat SoilVVGSSCATAEDFRNAIKLVRANRASLAALFSHHFPLTRTAEAFEFAMNRPPDAIKVLVTV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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