NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F084512

Metagenome / Metatranscriptome Family F084512

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084512
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 113 residues
Representative Sequence MSFDIGSVGGTPAAAAAQGSQRSTAAPSSSAPSADTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Number of Associated Samples 80
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 81.08 %
% of genes near scaffold ends (potentially truncated) 24.11 %
% of genes from short scaffolds (< 2000 bps) 71.43 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (53.571 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(25.000 % of family members)
Environment Ontology (ENVO) Unclassified
(25.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.107 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 19.72%    β-sheet: 13.38%    Coil/Unstructured: 66.90%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF02465FliD_N 31.25
PF07195FliD_C 12.50
PF13432TPR_16 6.25
PF13428TPR_14 4.46
PF01312Bac_export_2 2.68
PF02561FliS 2.68
PF00672HAMP 1.79
PF00535Glycos_transf_2 1.79
PF07719TPR_2 1.79
PF03646FlaG 0.89
PF08345YscJ_FliF_C 0.89
PF12611Flagellar_put 0.89
PF14559TPR_19 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG1345Flagellar capping protein FliDCell motility [N] 43.75
COG1516Flagellin-specific chaperone FliSCell motility [N] 8.04
COG1766Flagellar biosynthesis/type III secretory pathway M-ring protein FliF/YscJCell motility [N] 1.79
COG1334Uncharacterized conserved protein, FlaG/YvyC familyGeneral function prediction only [R] 0.89


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A53.57 %
All OrganismsrootAll Organisms46.43 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459012|GOYVCMS02FVJKFNot Available513Open in IMG/M
3300001546|JGI12659J15293_10008090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3005Open in IMG/M
3300003505|JGIcombinedJ51221_10395724All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300004091|Ga0062387_101762239Not Available504Open in IMG/M
3300004092|Ga0062389_104709113Not Available514Open in IMG/M
3300005435|Ga0070714_100297851All Organisms → cellular organisms → Bacteria1503Open in IMG/M
3300005435|Ga0070714_100382166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1328Open in IMG/M
3300005437|Ga0070710_11225541Not Available555Open in IMG/M
3300005529|Ga0070741_11059722Not Available692Open in IMG/M
3300005533|Ga0070734_10371843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei816Open in IMG/M
3300005538|Ga0070731_10555965All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia764Open in IMG/M
3300005602|Ga0070762_10677014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales690Open in IMG/M
3300005764|Ga0066903_109140185All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300005921|Ga0070766_10376475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia926Open in IMG/M
3300006028|Ga0070717_11229055Not Available682Open in IMG/M
3300006176|Ga0070765_100110043All Organisms → cellular organisms → Bacteria2398Open in IMG/M
3300006176|Ga0070765_100139608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei2149Open in IMG/M
3300009520|Ga0116214_1015550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2702Open in IMG/M
3300009521|Ga0116222_1055628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1720Open in IMG/M
3300009525|Ga0116220_10128436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1083Open in IMG/M
3300010371|Ga0134125_10899556Not Available972Open in IMG/M
3300010373|Ga0134128_10292529Not Available1825Open in IMG/M
3300010376|Ga0126381_105047662Not Available506Open in IMG/M
3300012154|Ga0153953_1070316Not Available635Open in IMG/M
3300012951|Ga0164300_10174052Not Available1031Open in IMG/M
3300012958|Ga0164299_10465987Not Available831Open in IMG/M
3300016422|Ga0182039_10321537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1289Open in IMG/M
3300016445|Ga0182038_11897204Not Available538Open in IMG/M
3300017942|Ga0187808_10357160Not Available664Open in IMG/M
3300017959|Ga0187779_10005907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei7146Open in IMG/M
3300017959|Ga0187779_10010457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5315Open in IMG/M
3300017961|Ga0187778_10086172Not Available1942Open in IMG/M
3300017966|Ga0187776_10287003Not Available1065Open in IMG/M
3300017972|Ga0187781_10025337All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4107Open in IMG/M
3300017973|Ga0187780_10208853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1362Open in IMG/M
3300017974|Ga0187777_10007873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei6728Open in IMG/M
3300017974|Ga0187777_10253749Not Available1194Open in IMG/M
3300017993|Ga0187823_10103441Not Available855Open in IMG/M
3300018001|Ga0187815_10360687Not Available618Open in IMG/M
3300018058|Ga0187766_10132038All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium1538Open in IMG/M
3300018058|Ga0187766_10642799Not Available728Open in IMG/M
3300018060|Ga0187765_10019212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3222Open in IMG/M
3300018060|Ga0187765_10025727All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2851Open in IMG/M
3300018060|Ga0187765_10034290All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei2527Open in IMG/M
3300018085|Ga0187772_10214814Not Available1296Open in IMG/M
3300018468|Ga0066662_12860227Not Available512Open in IMG/M
3300020150|Ga0187768_1060901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales844Open in IMG/M
3300020150|Ga0187768_1147051Not Available543Open in IMG/M
3300020581|Ga0210399_11529230Not Available517Open in IMG/M
3300020582|Ga0210395_10156158Not Available1704Open in IMG/M
3300021171|Ga0210405_10123963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei → Conexibacter woesei DSM 146842041Open in IMG/M
3300021181|Ga0210388_10634355Not Available933Open in IMG/M
3300021374|Ga0213881_10126423Not Available1114Open in IMG/M
3300021374|Ga0213881_10157962Not Available995Open in IMG/M
3300021377|Ga0213874_10168630Not Available773Open in IMG/M
3300021384|Ga0213876_10009327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5286Open in IMG/M
3300021384|Ga0213876_10020824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei → Conexibacter woesei DSM 146843468Open in IMG/M
3300021384|Ga0213876_10255890Not Available930Open in IMG/M
3300021388|Ga0213875_10025975All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2788Open in IMG/M
3300021388|Ga0213875_10203874Not Available930Open in IMG/M
3300021388|Ga0213875_10220420Not Available893Open in IMG/M
3300021402|Ga0210385_10425967Not Available999Open in IMG/M
3300021402|Ga0210385_10902647Not Available678Open in IMG/M
3300021407|Ga0210383_11252127Not Available622Open in IMG/M
3300021439|Ga0213879_10195039Not Available601Open in IMG/M
3300025898|Ga0207692_11048155Not Available539Open in IMG/M
3300025929|Ga0207664_10529189Not Available1057Open in IMG/M
3300027117|Ga0209732_1050806Not Available720Open in IMG/M
3300027505|Ga0209218_1010332Not Available1607Open in IMG/M
3300027568|Ga0208042_1061757Not Available954Open in IMG/M
3300027604|Ga0208324_1014436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei2516Open in IMG/M
3300027773|Ga0209810_1216848Not Available752Open in IMG/M
3300027855|Ga0209693_10454121Not Available616Open in IMG/M
3300028906|Ga0308309_10039648Not Available3312Open in IMG/M
3300031040|Ga0265754_1038038Not Available520Open in IMG/M
3300031546|Ga0318538_10252202Not Available948Open in IMG/M
3300031549|Ga0318571_10027251Not Available1557Open in IMG/M
3300031572|Ga0318515_10211981All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300031715|Ga0307476_10974119Not Available625Open in IMG/M
3300031764|Ga0318535_10573193Not Available500Open in IMG/M
3300031769|Ga0318526_10146615All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300031771|Ga0318546_10064460All Organisms → cellular organisms → Bacteria2323Open in IMG/M
3300031798|Ga0318523_10075096Not Available1630Open in IMG/M
3300032770|Ga0335085_10381794Not Available1641Open in IMG/M
3300032770|Ga0335085_10405328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1581Open in IMG/M
3300032770|Ga0335085_12317541Not Available537Open in IMG/M
3300032783|Ga0335079_10011967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei9912Open in IMG/M
3300032783|Ga0335079_10023720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales7028Open in IMG/M
3300032783|Ga0335079_11768270Not Available602Open in IMG/M
3300032805|Ga0335078_10003223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales24334Open in IMG/M
3300032805|Ga0335078_10018482All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales10365Open in IMG/M
3300032805|Ga0335078_10058781All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia5655Open in IMG/M
3300032805|Ga0335078_10105870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei4052Open in IMG/M
3300032805|Ga0335078_10167795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei3086Open in IMG/M
3300032805|Ga0335078_10345964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei → Conexibacter woesei DSM 146841977Open in IMG/M
3300032805|Ga0335078_10770402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter1179Open in IMG/M
3300032805|Ga0335078_10900316Not Available1063Open in IMG/M
3300032828|Ga0335080_10588614Not Available1171Open in IMG/M
3300032828|Ga0335080_11273706Not Available736Open in IMG/M
3300032892|Ga0335081_10084299All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei4795Open in IMG/M
3300032895|Ga0335074_10001507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei31533Open in IMG/M
3300032895|Ga0335074_10132121All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3205Open in IMG/M
3300032895|Ga0335074_10203808All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2406Open in IMG/M
3300032895|Ga0335074_10278162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei → Conexibacter woesei DSM 146841937Open in IMG/M
3300032896|Ga0335075_10014004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei12070Open in IMG/M
3300032896|Ga0335075_10428357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1391Open in IMG/M
3300032898|Ga0335072_10805612Not Available897Open in IMG/M
3300032954|Ga0335083_10454158Not Available1082Open in IMG/M
3300032954|Ga0335083_11221694Not Available582Open in IMG/M
3300032955|Ga0335076_10001566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei22185Open in IMG/M
3300033134|Ga0335073_10292284All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1960Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil25.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland15.18%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.50%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots6.25%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.36%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.46%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.57%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.57%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.68%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.79%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.79%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock1.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.89%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.89%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.89%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459012Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grassEnvironmentalOpen in IMG/M
3300001546Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012154Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ037 MetaGHost-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020150Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MGEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300021388Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8Host-AssociatedOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021439Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027117Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027505Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027568Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027604Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027773Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031040Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
N56_073690502170459012Grass SoilMSFDIGSVGRTPAAAPAANSSRPTAAPSPAAHDADTVTVDTIPASPPDEVHDAIGVANQAYQNLKASGSELRFKVNEETGKLSVEVHDVHGNLMFTVPRARCWTSPRAH
JGI12659J15293_1000809023300001546Forest SoilMSFDIGSVGRTPAPATTQTARAAAAAPTQATGAGDTVTVDTIPASPPPEVEDAMGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGQPLPSNPQ*
JGIcombinedJ51221_1039572423300003505Forest SoilSFDIGSVGGTPAAAATAKSSRPAAVPSQAAQSADTVTVDTIPASPPDEVLDAIGVANQAYHSLQASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPTN*
Ga0062387_10176223913300004091Bog Forest SoilMSFDIGSVGGTPAVGPARGASRPAAVAAPSAQQADTVTVDTIPASPPDEVHDAIGVANQAYQNLKASGSEMRFKVNEATGKLSVEIHDVHGNLLFTVPASTVLDVASGGSLPSN*
Ga0062389_10470911313300004092Bog Forest SoilMSFDIGSVGGTPAAAPATGSSRPAAVAAPSAQDADTVTVDTIPASPPDEVHDAIGVANQAYQNLQASGSEMRFKVNEATGKLSVEIHDVHGNLLFTVPASTVLDVASGGSLPSN*
Ga0070714_10029785123300005435Agricultural SoilMSYDIGSVGRTPAPTPSRTARSSAPAPTQAVHAADTVTVDTIPASPPPEVHDAIGVANQAYHNLKADGSELRFKVDESTGKLTVEVHDTQGNLMFTVPASTVLDVASGQPLSRPGN*
Ga0070714_10038216623300005435Agricultural SoilMSYDIGSVGRTPAPVPSRTARSSAPAPAHAAHATETVTVDTIPASPPPEVQDAIGVANQAYHNLQAQGSELRFKINETTGKLTVEVHDTKGELLFTVPTSTVLDVASGQPLSSPGK*
Ga0070710_1122554113300005437Corn, Switchgrass And Miscanthus RhizosphereMSYDIGSVGRTPAPTPSRTARSSAPAPTQAVHAADTVTVDTIPASPPPEVHDAIGVANQAYHNLKADGSELRFKVDESTGKVTVEVHDTQGNLMFTVP
Ga0070741_1105972213300005529Surface SoilMSYDIGSVGRTPAPAPSRTARSSAPAPAQAAHGADTVTVDTIPASPPPEVHEAIGVANQAYHNLKADGSELRFKINESTGKLSVEVHDVHGNLMFTVPASTVLDVASGQPLSRPSE*
Ga0070734_1037184323300005533Surface SoilMSFDIGSVGRTPTTAPAQTARSSAPAPTQSSQAAATVTIDTIPASPPAEVQDAIGVANQAYHDLKSEGSELRFKINEATGKLSVEVHDVHGNLMFTVPASTVLDVASGQPLTRPSN*
Ga0070731_1055596523300005538Surface SoilMSYDIGSVGRTPAPAPSQTARSSAPAPAQAAHAVDTVTVDTIPASPPPEVQDAIGVANQAYHNLRADGSELRFKINESTGKLSVEVHDVHGNL
Ga0070762_1067701413300005602SoilVGRTPAATPATGSSRPPAATSSSASEADTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGPLPTPSN*
Ga0066903_10914018513300005764Tropical Forest SoilATTPSQSARSSAPAPAEAAHASDTVTVDTIPTSPPEEVHDAIGVANQAYHNLQASGRELRFKVNESTGKLTVEVHDTKGNLMFTVPGSTALDVASGQPLSSPEDYAPIS*
Ga0070766_1037647513300005921SoilMSFDIGSVGRTPAATPATGSSRPPAATSSSASEADTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSEMRFKVNEATGKLSVEVHDVHGNLLFT
Ga0070717_1122905513300006028Corn, Switchgrass And Miscanthus RhizosphereMSYDIGSVGRTPAPTPSQTARSSAPAPAQAVHAVDTVTVDTIPASPPPEVQEAMGVANQAYHNLKADGTELRFKINESTGKLSVEVHDTKGNLLFTVPGSTVLDVASGQPLSSPSK*
Ga0070765_10011004323300006176SoilMSFDIGSVGGTPAAAAAAKSQRPAAVSSSSAGSTDTVTVDTIPASPPDEVHDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPTN*
Ga0070765_10013960813300006176SoilMSFDIGSVGRTPAATPATGSSRPPAATSSSASEADTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGPLPTPSN*
Ga0116214_101555013300009520Peatlands SoilMSFDIGSVGGTPAAATPAKSQRPAAVPSPSVGSTDTVTVDTIPASPPDEVHDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN*
Ga0116222_105562823300009521Peatlands SoilMSFDIGSVGGTPAAAAAAKSQRSAAVPSPSVGSTDTVTVDTIPASPPDEVHDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGDSLPSN*
Ga0116220_1012843623300009525Peatlands SoilMSFDIGSVGGTPAAAAAAKSQRSAAVPSPSVGSTDTVTVDTIPASPPDEVHDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN*
Ga0134125_1089955613300010371Terrestrial SoilMSYDIGSVGRTPAPTPSQKTARPSAPAPAQAVHAADTVTVDTIPASPPPEVQDAIGVANQAYHNLKADGSELRFKINESTGKLSVEVHDTRGNLLFTVPGSTALDVASGQPLSRPGD*
Ga0134128_1029252923300010373Terrestrial SoilMSYDIGSVGRTPAPAPSRTARSSAPAPAQAAHAVDTVTVDTIPASPPPEVEDAIGVANQAYHNLRADGSELRFKINESTGKLSVEVHDVHGNLMFTVPASTVLDVASGQPLSSPGK*
Ga0126381_10504766223300010376Tropical Forest SoilMSFDIGSVGRTPATTPSQSARSSAPAPAEAAHASDTVTVDTIPTSPPEEVHDAIGVANQAYHNLQASGRELRFKVNESTGKLTVEVHDTKGNLMFTV
Ga0153953_107031613300012154Attine Ant Fungus GardensMSFDIGSVGRTPAPTATRTSGTSAPAAAQGTQATDPVTVDTIPASPPPEVHDAMGVANDAYQSLQAQGAELRFKVNEATGKLSVEVHDTHGNLLFTVPSSTVLDVASGQPLPSAPSVTG*
Ga0164300_1017405213300012951SoilMSFDIGSVGRTPAATPSQSARSSASAPTQATQVADTVTLDTIPASPPPEVQDAIGVADQAYHNLQSEGNELRFKIDDSTGKLTVEVHDVHGNLMVTVPASTVLDVASGQPLSRPSH*
Ga0164299_1046598723300012958SoilMSFDIGSVGRTPAAAPSQSARSSASAPTQATQVADTVTLDTIPASPPPEVQDAIGVADQAYHNLQSEGNELRFKIDDSTGKLTVEVHDVHGNLMFTVPASTVLDVASGQPLSRSSH*
Ga0182039_1032153723300016422SoilMSFDIGAVGRTPAVAPTTNTRPTSPAAEAQAPDAVTVTVDTIPATLPPEVHDAIGVANRAYHDLHASGSQLHFKVNEATGKLSVEVHDTHGNLMFTIPSRKVLDIAEGGSLQ
Ga0182038_1189720423300016445SoilMSFDIGSVGRTPPVAPTTNTRPVSPAAEVQAHSADTVTVDTIPATPPPEVHDAIGVANRAYHDLQASGSELRFKVNEATGKLSVEVHDTHGNLMFTIP
Ga0187808_1035716023300017942Freshwater SedimentMSFDIGSVGRTPAPATAQGSRTSTPASAAAAAQNSDTVTVDTIPASPPSEVHDAMGVANQAYHNLKAQGAEMRFKVNEATGKLTVEVHDVHGNLLFTVPASTALDVASGQPLPLNQA
Ga0187779_1000590783300017959Tropical PeatlandMSFDIGSVGGTPAAAAAQGSQRSTAAPSSSAPSADTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0187779_1001045723300017959Tropical PeatlandMSFDIGSVGGTPAAAAAQGSHRPTAAPSSSVQSADTVTVDTIPASPPDEVLDAIGVANQAYHNLQASGSEMRFKVNEATGKLSVEVHDVHGNLMFTVPASTALDVASGGSLPSN
Ga0187778_1008617223300017961Tropical PeatlandMSFDIGSVGGTPAAAAAQGSHRPTAAPSSSVQAADPVTVDTIPASPPDEVLDAIGVANQAYHNLQASGSEMRFKVNEATGKLSVEVHDVHGNLMFTVPASTALDVAAGGPLPSN
Ga0187776_1028700323300017966Tropical PeatlandMSFDIGSVGGTPAAAAAQGSRRSTAAPSSSAPSADTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSELRFKVNEATGKLSVEVHDVHGNLMFTVPASTALDVASGGSLPSN
Ga0187781_1002533723300017972Tropical PeatlandMSFDIGSVGRTPAPASTQTTRSSAPGPVQTTGSGDTVTVDTIPASPPQEVQDAMGVANQAYHNLQASGSELRFKVNEATGKVSVEVHDVHGNLLFTVPASTALDVASGEPLPSN
Ga0187780_1020885323300017973Tropical PeatlandMSFDIGSVGRTPAPTPTQGARSSVATPSQAAQASDTVTVDTIPASPPPEVQDAIGVANQAYHNLQAGGSELRFKVNEATGKLTVEVHDTHGNLLFTVPASTALDVASGQPLPSNPQ
Ga0187777_1000787373300017974Tropical PeatlandMSFDIGSVGGMPAAAAAAKSQRTNAVPSPSVGSTDTVTVDTIPASPPDEVYDAIGAANQAYHNLQAGGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0187777_1025374923300017974Tropical PeatlandMSFDIGSVGGTPAAAAAAGSRRPSAAPPPSAQSTDTVTVDTIPASPPDEVHDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGSLPSLPSN
Ga0187777_1061127913300017974Tropical PeatlandHRPTAAPSSSVQAADPVTVDTIPASPPDEVLDAIGVADQAYHNLQASGSEMRFKVNEATGKLSVEVHDVHGNLMFTVPASTALDVASGGSLPSN
Ga0187823_1010344123300017993Freshwater SedimentMSFDIGSVGGTPAAAAAGKSQRPSAVPSSPVGSTDTVTVDTIPASPPDEVHDAIGVANQAYHNLQATGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPLS
Ga0187815_1036068723300018001Freshwater SedimentMSFDIGSVGGTPAAATPAKSQRPAAVPSPSVGSTDTVTVDTIPASPPDEVHDAIGLANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0187766_1013203833300018058Tropical PeatlandMSFDIGSVGGTPAAAAAANGQRPTAAPSPSVQSADTVTVDTIPASPPDEVYDAIGAANQAYHNLQAGGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0187766_1064279923300018058Tropical PeatlandMSFDIGSVGGTPAAAAAAGSRRPSAAPPPSAQSTDTVTVDTIPASPPDEVHDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGSLPSL
Ga0187765_1001921223300018060Tropical PeatlandMSFDIGSVGGTPAAAAAANGQRPTAAPSPSVQSADTVTVDTIPASPPDEVHDAIGVANQAYHNLQATGSELRFKVNEATGKLSVEVHDVHGNLLFTVPSSTVLDVASGGPLPTN
Ga0187765_1002572713300018060Tropical PeatlandMSFDIGSVGGTPAAAAAAKSQRPAAVASPSVGSTDPVTVDAIPASPPDEVYDAIGVANQAYHDLQAGGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0187765_1003429023300018060Tropical PeatlandMSFDIGSVGGMPAAAAAAKSQRTNAVPSPSVGSTDTVTVDTIPASPPDEVYDAIGAANQAYHNLQAGGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPFN
Ga0187772_1021481423300018085Tropical PeatlandMSFDIGSVGGTPAAAAAAKSQRPAAVPSSSVGSTDTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPTN
Ga0066662_1286022713300018468Grasslands SoilMSYDIGSVGRTPAPAPSQTARSSAPAPAQAAHAADTVTVDTIPASPPPEVHEAIGVANQAYHSLKAHGSELRFKINESTGKLSVEVHDVHGNLMFTVPASTVLDVASGQPLSRPTE
Ga0187768_106090123300020150Tropical PeatlandMSFDIGSVGGTPAAAAAAKSQRPNAVPSPSVGSTDTVTVDTIPASPPDEVYDAIGAANQAYHNLQAGGSELRFKVNEATGKLSVEVHDVHGNLLFTVPSSTVLDVASGGPLPTN
Ga0187768_114705123300020150Tropical PeatlandSVGGTPAAAAAQGSQRSTAAPSSSAPSADTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0210399_1152923023300020581SoilMSFDIGSVGGTPAAASAAKSSRPAAVPSQAAQSADTVTVDTIPASPPDDVLDAIGVANQAYHSLQASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPTN
Ga0210395_1015615823300020582SoilMSYDISSVGGTPAAAQAAKSSRPTAVPSPAAQSADTVTVDTIPASPPDEVHDAIGVANQAYQNLKASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPTN
Ga0210405_1012396323300021171SoilMSFDIGSVGGTPAAAATAKSSRPAAVPSQAAQSADTVTVDTIPASPPDEVLDAIGVANQAYHSLQASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPTN
Ga0210388_1063435513300021181SoilMSFDIGSVGGTPAAASAAKSSRPAAVPSQAAQSADTVTVDTIPASPPDDVLDAIGVANQAYHSLQASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGSLPTN
Ga0213881_1012642323300021374Exposed RockSFDIGSVGRTPATAPSQTARSSAPGPVQAVPAADTVTVDTIPAAPPDEVHAAIGVANQAYHDLQAAGTELRFKINEATGKLSVEVHDVHGNLLFTVPSSVALEVASGQPLSSPGK
Ga0213881_1015796223300021374Exposed RockMSYDIGSVGRTPAPVPSQTARSSAPAPAQAAHAADTVTIDTIPASPPPEVQDAMGVANQAYHNLQAEGTELRFKINESTGKLSVEVHDVHGNLMFTVPASTALDVASGQPLSSPSK
Ga0213874_1016863013300021377Plant RootsMSFDIGSVGRMPASSPTQSARTSAPAPTQAAHSADTVTIDTIPASPPPEVHEAMGVAHEAYHNLKANGTELRFKINEATGKLSVEVHDVHGNVMF
Ga0213876_1000932733300021384Plant RootsMSYDIGSVGRTPAPVPSRTARSSAPAPAQAAHAADTVTVDTIPASPPPEVHDAISVANQAYHNLKADGSEMRFKINESTGKLTVEVHDVHGNLLFTVPASTVLDVASGQPLSSPGK
Ga0213876_1002082433300021384Plant RootsMSFDIGSVGRTPAAAPSQTARSSAPGPVQAVPAADTVTVDTIPATPPDEVHAAIGVANQAYHDLQAAGTELRFKINEATGKLSVEVHDVHGNLLFTVPSRVALEVASGQPLSSPGK
Ga0213876_1025589023300021384Plant RootsMSFDIGSVGRMPASSPTQSARTSAPAPTQAAHSADTVTIDTIPASPPPEVHEAMGVAHQAYHNLKANGTELRFKINEATGKLSVEVHDVHGNVMFTVPSSTVLDVASGQPLPSSPQ
Ga0213875_1002597523300021388Plant RootsMSIDIGSVGRMPASAPAQSARSSASTPTQAARDADTVTVDTIPASPPAEVHEAMGVANQAYHNLKASGTELRFKINEATGKLSVEVHDVHGNLLFTVPASTALDVASGQPLPSSPK
Ga0213875_1020387423300021388Plant RootsMSFDIGSVGRTPATAPSQTARSSAPGPVQAVPAADTVTVDTIPAAPPDEVHAAIGVANQAYHDLQAAGTELRFKINEATGKLSVEVHDVHGNLLFTVPSSVALEVASGQPLSSPGK
Ga0213875_1022042013300021388Plant RootsMSFDIGSVGRTPASAPSQTARSSAPAPTRAPDTDTVTVDTIPASPPPEVHDAIGVANQAYHNLQAEGTELRFKINEATGKLSVEVHDVHGNLLFTVPASTALDVASGQPLSSPGN
Ga0210385_1042596723300021402SoilMSYDISSVGGTPAAAQAAASSRPTAVSSPATQSTDPVTVDTIPASPPDEVYDAMGVANQAYHNLQASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPTN
Ga0210385_1090264713300021402SoilMSFDIGSVGGTPAAAAPAGSQRPAAVPTSSVGSTDTVTVDTIPASPPEEVHDAIGVANQAYHNLQASGNEMRFKVNEATGKLSVEVHDTRGNLLFTVPTSTVLDVASGGSLPSN
Ga0210383_1125212723300021407SoilMSYDISSVGGTPAAAQPAKSSRPTAVPSPAAQSADTVTVDTIPASPPDEVHDAIGVANQAYQNLKANGNEMRFKVNEATGKLSVEVHDVHGNLLFTVPSSTVLDVASGGSLPSN
Ga0213879_1019503923300021439Bulk SoilMSFDIGSVGRTPAASPATGSSRPAAAPSSSAHEADTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSELRFKVNEATGKLSVEVHDVHGNLMFTVPASTALDVASGASLPLS
Ga0207692_1104815513300025898Corn, Switchgrass And Miscanthus RhizosphereMSFDIGSVGRTPAPTPSRTARSSAPAPTQAVHAADTVTVDTIPASPPPEVHDAIGVANQAYHNLKAEGNELRFKINESTGKLSVEVHDTKGNLLFTVPGSTVLDVASGQPLSSPSK
Ga0207664_1052918923300025929Agricultural SoilMSYDIGSVGRTPAPTPSRTARSSAPAPTQAVHAADTVTVDTIPASPPPEVHDAIGVANQAYHNLKADGSELRFKVDESTGKLTVEVHDTQGNLMFTVPASTVLDVASGQPLSRPGN
Ga0209732_105080623300027117Forest SoilMSFDIGSVGRTPAPATTQTARAAAAAPTQATGAGDTVTVDTIPASPPPEVEDAMGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGQPLPSNPQ
Ga0209218_101033223300027505Forest SoilMSFEIGSVGGTPAAAAAGRSQRPTVVPSPSVEPTDTVTVDTIPASPPDEVYDAMGVANQAYHNLQASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPTN
Ga0208042_106175723300027568Peatlands SoilMSFDIGSVGGTPAAAAAAKSQRSAAVPSPSVGSTDTVTVDTIPASPPDEVHDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0208324_101443623300027604Peatlands SoilMSFDIGSVGGTPAAATPAKSQRPAAVPSPSVGSTDTVTVDTIPASPPDEVHDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0209810_121684823300027773Surface SoilSQSARSSAAAPAQAAHGADTVTLDTIPASPPAEVHEAIGVANQAYHNLQADGSELRFKINESTGKLTVEVHDVHGNLMFTVPASTVLDVASGQPLSRPSN
Ga0209693_1045412123300027855SoilMSFDIGSVGRTPAATPATGSSRPPAATSSSASEADTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGSLPTN
Ga0308309_1003964823300028906SoilMSFDIGSVGRTPAATPATGSSRPPAATSSSASEADTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGPLPTPSN
Ga0265754_103803813300031040SoilRTPAPAAAPSARSSASASAQANETGGTVTVDTIPASPPPEVQDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPARTVLDVASGGSLPSN
Ga0318538_1025220223300031546SoilIGSVGRTPATTAPQTARSSAPAPAQAAHATDPVTVDAIPASPPPEVHDAIGVANQAYHDLKTSGSELRFKINEATGKLTVEVHDVHGNVLFTVPAKTVLDVASGQPLSSSGD
Ga0318571_1002725123300031549SoilMSFDIGSVGRTPATTAPQTARSSAPAPAQAAHATDPVTVDAIPASPPPEVHDAIGVANQAYHDLKTSGSELRFKINEATGKLTVEVHDVHGNVLFTVPAKTVLDVASGQPLSSSGD
Ga0318515_1021198123300031572SoilMSFDIGSVGRTPATTAPQTARSSAPAPAQAAHATDPVTVDAIPASPPPEVHDAIGVANQAYHDLKTSGSELRFKINEATGKLTVEVHDVQGNLMSTVPASTVLNVASGQPISGSGD
Ga0307476_1097411913300031715Hardwood Forest SoilMSFDIGSVGGTPAAAATAKSSRPAAVPSQAAQSADTVTVDTIPASPPDEVLDAIGVANQAYHSLQASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGPLPTPSN
Ga0318535_1057319313300031764SoilMSFDIGSVGRTPATTAPQTARSSAPAPAQAAHATDPVTVDAIPASPPPEVHDAIGVANQAYHDLKTSGSELRFKINEATGKLTVEVHDVHGNV
Ga0318526_1014661513300031769SoilMSFDIGSVGRTPATTAPQTARSSAPAPAQAAHATDPVTVDAIPASPPPEVHDAIGVANQAYHDLKTSGSELRFKINEATGKLTVEVHDVQGNLMSTVPASTVLNVASGQP
Ga0318546_1006446023300031771SoilMSFDIGSVGRTPATTAPQTARSSAPAPAQAAHATDPVTVDAIPASPPPEVHDAIGVANQAYHDLKTSGSELRFKINEATGKLTVEVHDVHGNVLFTVPAKTVLDVASGQPLSRSGD
Ga0318523_1007509623300031798SoilGSVGRTPATTAPQTARSSAPAPAQAAHATDPVTVDAIPASPPPEVHDAIGVANQAYHDLKTSGSELRFKINEATGKLTVEVHDVHGNVLFTVPAKTVLDVASGQPLSSSGD
Ga0335085_1038179423300032770SoilMSFDIGSVGRTPATTPSQAARSSAPAPVGAAHASDTVTVDTIPASPPDEVHDAIGVANQAYHNLKAAGSELRFKVNESTGKLTVEVHDTKGNLLFEVPASTALDVASGQPLSSPEDYAPI
Ga0335085_1040532813300032770SoilMSFDIGSVGRTPAASPAAGNSRPAAASSSSAHDADTVTVDTIPASPPDEVHDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGSLPSN
Ga0335085_1231754113300032770SoilMSFDIGSVGRTPATAPSQATRSTAAAPAQAAPATDTVTVDTIPASPPPEVEDAMGVANQAYHDLEAEGSEMRFKINEATGRLTVEVHDVHGNVMFTVPPSTVLDVASGQPLTRPDE
Ga0335079_1001196793300032783SoilMSFDIGSVGGTPAAAAAQGSQRPTAAPSPSAQSTDTVTVDTIPPSPPDEVHDAIGVANQAYHNLQAAGSELRFKVNESTGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0335079_1002372053300032783SoilMSFDIGSVGGTPAAAAAAKSQRTTAVPSSSVDSTDAVAVDTIPASPPDEVHDAIGVANQAYHNLKAAGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGSSLPLS
Ga0335079_1176827013300032783SoilMSFDIGSVGRTPATTPSQTARSSAPAPAQAAHASDTVNLDTIPASPPEEVHDAIGVANHAYHNLQAAGRELRFKVNESTGKLTVEVHDTKGNLMFTVPGSTALDVASGQPLSSPEDYAPI
Ga0335078_10003223263300032805SoilMSFDIGSVGRTPAASPATGSSRPAAASPSSAHEADTVTVDTIPASPPDEVHDAIGVANQAYHNLKAAGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGASLPLS
Ga0335078_1001848293300032805SoilMSFDIGSVGGTPAAAPAANSSRPTAVPSPAAHDADTVTVDTIPASPPDEVHDAIGVANQAYHNLKAAGSELRFKVNEATGKLSVEVHDVHGNLMFTVPASTVLDVASGASLPLS
Ga0335078_1005878133300032805SoilMSFDIGSVGRTPAASPATGSSRPAAATSSSAHEADTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGPLPSPSN
Ga0335078_1010587043300032805SoilMSFDIGSVGRTPAASPAAGNSRPAAASSSSAHDADTVTVDTIPASPPDEVHDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASG
Ga0335078_1016779543300032805SoilMSFDIGSVGGTPAAAAAAKSQRPTAVPAPSVQSADTVTVDTIPASPPDEVLDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0335078_1034596423300032805SoilMSFDIGSVGGTPAAAAAAKSQRPAAVPSGSVASTDTVTVDTIPASPPDEVHDAIGVANQAYHNLKATGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0335078_1077040223300032805SoilMSFDIGSVSGAHAAALSQTARSSTPAPAQSAHGTDTVTVDTIPASPPAEVHDAMGVANQAYHNLKSDGSEMRFKINEATGKLTVEIHDVHGNLMFTVPASTVLEVASGQPLKSPGN
Ga0335078_1090031613300032805SoilMSFDIGSVGRTPAAAPAAKSQRPTSVSTPAAHDADTVNVDTIPASPPDEVHDAIGVANQAYHNLKASGSELRFKVNEATGKLSVEVHDVHGNLMFTVPASTALDVASGASLP
Ga0335080_1058861413300032828SoilSFDIGSVGRTPAASPATGSSRPVSATSSPAHEADTVTVDTIPASPPDEVHDAIGVANQAYHDLKASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGPLPSPSN
Ga0335080_1127370623300032828SoilMSFDIGSVGGTPAAAPAANSSRPTAVPSPAAHDADTVTVDTIPASPPDEVHDAIGVANQAYHNLKASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGPRPSPSN
Ga0335081_1008429953300032892SoilMSFDIDSVGRTPAASPAAGNSRPAAVASSSAHDADTVTVDTIPASPPDEVHDAIGVANQAYHNLQASGNELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGSLPSN
Ga0335074_10001507123300032895SoilMSFDIGSVGRTPAPASTQTARSSAAGPAQTARSGDTVTVDTIPASPPQEVQDAMGVANQAYQSLQAAGSELRFKVNEATGKVSVEVHDVHGNLLFTVPASTALDVASGQPLPSPGGAS
Ga0335074_1013212123300032895SoilMSFDIGSVGRTPAPAAAQSARPSTPASAQASEAGDTVTVDTIPASPPPEVQDAIGVANQAYHDLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPSSTALDVASGQPLPSTPQ
Ga0335074_1020380823300032895SoilMSYDISSVGGTPAAAQAANSSRPTAVPSTAAQSADPVTVDTIPASPPDEVYDAMGVANQAYHNLQASGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPSSTALDVASGGSLPTN
Ga0335074_1027816223300032895SoilMSFDIGSVGGTPAATGAANSSRPTAVPATAAQSTDTVTVDTIPASPPDEVHDAIGVANQAYHSLKASGSEMRFKVNEATGKLSVEIHDAKGNLLFTVPASTVLDVASGGSLPTN
Ga0335075_10014004133300032896SoilMSFDIGSVGGTPAPVTTQTARSSGPASAQAAHEADTVTVDTIPASPPPEVQDAMGVANQAYHNLQATGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALSVASGQPLPSNNQ
Ga0335075_1042835723300032896SoilMSFDIGSVGRTPAASPAAGNSRPAAVSSSSAHDADTVTVDTIPASPPDEVHDAIGVANQAYHNLQASGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGPLPSN
Ga0335072_1080561223300032898SoilMSFDIGSVGRTPATAPTQGSRSSAPASTSSAEAADGVTVDTIPASPPPEVQDAMGVANQAYQSLQASGTELRFKVNEATGKLSVEVHDTHGNLLFTVPASTALDVASGQPLPSTNQ
Ga0335083_1045415813300032954SoilAAKSQRPAAVPSGSVASTDTVTVDTIPASPPDEVHDAIGVANQAYHNLKATGSELRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0335083_1122169413300032954SoilFDIGSVGRTPATTPSQAARSSAPAPVGAAHASDTVTVDTIPASPPDEVHDAIGVANQAYHNLKAAGSELRFKVNESTGKLTVEVHDTKGNLLFEVPASTALDVASGQPLSSPEDYAPIS
Ga0335076_1000156643300032955SoilMSFDIGSVGGTPAAAATAKSQRPAAVASSSVGSTDPVTVDAIPASPPDEVYDAIGVANQAYHDLQAGGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTVLDVASGGSLPSN
Ga0335073_1029228423300033134SoilMSFDIGSVGRTPAASPAAGSSRPAAVSSSSAQDADTVTVDTIPASPPDEVHDAIGVANQAYHNLKATGSEMRFKVNEATGKLSVEVHDVHGNLLFTVPASTALDVASGGSLPSPSN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.