Metagenome / Metatranscriptome Family F084552

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084552
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	113 residues
Representative Sequence	MPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG
Number of Associated Samples	98
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.04 %
% of genes near scaffold ends (potentially truncated)	23.21 %
% of genes from short scaffolds (< 2000 bps)	83.04 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.964 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.036 % of family members)
Environment Ontology (ENVO)	Unclassified (33.036 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.61% β-sheet: 15.65% Coil/Unstructured: 41.74%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF08044	DUF1707	3.57
PF13419	HAD_2	2.68
PF04075	F420H2_quin_red	1.79
PF00589	Phage_integrase	1.79
PF13374	TPR_10	1.79
PF00293	NUDIX	0.89
PF12680	SnoaL_2	0.89
PF13586	DDE_Tnp_1_2	0.89
PF12728	HTH_17	0.89
PF13006	Nterm_IS4	0.89
PF00480	ROK	0.89
PF12681	Glyoxalase_2	0.89
PF13520	AA_permease_2	0.89
PF06559	DCD	0.89
PF00685	Sulfotransfer_1	0.89
PF11716	MDMPI_N	0.89
PF01872	RibD_C	0.89
PF14525	AraC_binding_2	0.89
PF13238	AAA_18	0.89
PF08530	PepX_C	0.89
PF13193	AMP-binding_C	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.79
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.89
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.89
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.89
COG2936	Predicted acyl esterase	General function prediction only [R]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.96 %
All Organisms	root	All Organisms	33.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.96 %
cellular organisms	root	All Organisms → cellular organisms	33.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.21 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.79 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.64 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.79 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.89 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.96 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.25 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.79 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.89 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.89 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.89 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.25 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.79 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.89 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	0.89 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.89 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.89 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.89 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.25 %
Pseudomonas syringae group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group	1.79 %
Pedococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus	0.89 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.89 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.89 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.89 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.89 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.25 %
Pseudomonas caspiana	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas caspiana	1.79 %
unclassified Paenibacillus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus	0.89 %
Pedococcus cremeus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus cremeus	0.89 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.89 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.89 %
Actinopolymorpha pittospori	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha pittospori	0.89 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.25 %
Pseudomonas caspiana	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas caspiana	1.79 %
Paenibacillus sp. HW567	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. HW567	0.89 %
Streptomyces sp. WMMB 322	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WMMB 322	0.89 %
Pedococcus cremeus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus cremeus	0.89 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.89 %
Actinopolymorpha pittospori	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha pittospori	0.89 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10070325	Not Available	1363	Open in IMG/M
3300003505\|JGIcombinedJ51221_10166954	Not Available	891	Open in IMG/M
3300004152\|Ga0062386_100527195	Not Available	961	Open in IMG/M
3300004635\|Ga0062388_100634874	Not Available	985	Open in IMG/M
3300005434\|Ga0070709_11808639	Not Available	500	Open in IMG/M
3300005435\|Ga0070714_101810287	Not Available	596	Open in IMG/M
3300005445\|Ga0070708_100056201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3500	Open in IMG/M
3300005467\|Ga0070706_100266015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha pittospori	1600	Open in IMG/M
3300005468\|Ga0070707_100034461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4828	Open in IMG/M
3300005602\|Ga0070762_10684634	Not Available	687	Open in IMG/M
3300005610\|Ga0070763_10975828	Not Available	506	Open in IMG/M
3300005712\|Ga0070764_10190420	Not Available	1146	Open in IMG/M
3300005921\|Ga0070766_10118231	Not Available	1590	Open in IMG/M
3300005921\|Ga0070766_10330383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. HW567	986	Open in IMG/M
3300005995\|Ga0066790_10004714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6049	Open in IMG/M
3300006050\|Ga0075028_100988833	Not Available	523	Open in IMG/M
3300006059\|Ga0075017_100626935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	823	Open in IMG/M
3300006175\|Ga0070712_100243937	Not Available	1432	Open in IMG/M
3300006176\|Ga0070765_100362446	Not Available	1349	Open in IMG/M
3300006904\|Ga0075424_101223698	Not Available	799	Open in IMG/M
3300009520\|Ga0116214_1204844	Not Available	743	Open in IMG/M
3300010048\|Ga0126373_10959373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	920	Open in IMG/M
3300010361\|Ga0126378_12253434	Not Available	622	Open in IMG/M
3300010366\|Ga0126379_13844289	Not Available	503	Open in IMG/M
3300010376\|Ga0126381_101347477	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300010379\|Ga0136449_100308777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus cremeus	2876	Open in IMG/M
3300010379\|Ga0136449_100649283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1784	Open in IMG/M
3300010379\|Ga0136449_102642132	Not Available	715	Open in IMG/M
3300010880\|Ga0126350_11647467	Not Available	839	Open in IMG/M
3300011120\|Ga0150983_13496105	Not Available	851	Open in IMG/M
3300013296\|Ga0157374_11659922	Not Available	663	Open in IMG/M
3300014838\|Ga0182030_10108909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3765	Open in IMG/M
3300015371\|Ga0132258_11874043	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1510	Open in IMG/M
3300016319\|Ga0182033_11179760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300017821\|Ga0187812_1185024	Not Available	667	Open in IMG/M
3300017926\|Ga0187807_1265860	Not Available	564	Open in IMG/M
3300017937\|Ga0187809_10150627	Not Available	804	Open in IMG/M
3300017946\|Ga0187879_10694135	Not Available	567	Open in IMG/M
3300017959\|Ga0187779_11013319	Not Available	577	Open in IMG/M
3300017961\|Ga0187778_10499332	Not Available	807	Open in IMG/M
3300017972\|Ga0187781_11122471	Not Available	577	Open in IMG/M
3300017973\|Ga0187780_10511027	Not Available	858	Open in IMG/M
3300017975\|Ga0187782_11401365	Not Available	549	Open in IMG/M
3300018060\|Ga0187765_10615553	Not Available	703	Open in IMG/M
3300018085\|Ga0187772_10020040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3827	Open in IMG/M
3300020579\|Ga0210407_10338853	Not Available	1176	Open in IMG/M
3300020580\|Ga0210403_10665553	Not Available	837	Open in IMG/M
3300020581\|Ga0210399_10702816	Not Available	831	Open in IMG/M
3300020582\|Ga0210395_10134219	Not Available	1842	Open in IMG/M
3300020582\|Ga0210395_10670448	Not Available	776	Open in IMG/M
3300020583\|Ga0210401_10469027	Not Available	1121	Open in IMG/M
3300020583\|Ga0210401_10529470	Not Available	1041	Open in IMG/M
3300021171\|Ga0210405_10200889	Not Available	1580	Open in IMG/M
3300021171\|Ga0210405_10448866	Not Available	1014	Open in IMG/M
3300021180\|Ga0210396_11762030	Not Available	501	Open in IMG/M
3300021181\|Ga0210388_10341979	Not Available	1315	Open in IMG/M
3300021402\|Ga0210385_10611317	Not Available	831	Open in IMG/M
3300021404\|Ga0210389_10252503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas caspiana	1380	Open in IMG/M
3300021405\|Ga0210387_10094640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2488	Open in IMG/M
3300021405\|Ga0210387_11285134	Not Available	633	Open in IMG/M
3300021406\|Ga0210386_10057027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3113	Open in IMG/M
3300021406\|Ga0210386_10103263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WMMB 322	2339	Open in IMG/M
3300021407\|Ga0210383_10239640	Not Available	1555	Open in IMG/M
3300021407\|Ga0210383_10903194	Not Available	752	Open in IMG/M
3300021420\|Ga0210394_11077734	Not Available	694	Open in IMG/M
3300021478\|Ga0210402_10289493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas caspiana	1515	Open in IMG/M
3300021479\|Ga0210410_10678429	Not Available	911	Open in IMG/M
3300021560\|Ga0126371_10170958	All Organisms → cellular organisms → Bacteria	2250	Open in IMG/M
3300022709\|Ga0222756_1057032	Not Available	597	Open in IMG/M
3300022717\|Ga0242661_1145260	Not Available	529	Open in IMG/M
3300024271\|Ga0224564_1105844	Not Available	573	Open in IMG/M
3300025910\|Ga0207684_10058140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3281	Open in IMG/M
3300025915\|Ga0207693_10253964	Not Available	1379	Open in IMG/M
3300026294\|Ga0209839_10081407	Not Available	1125	Open in IMG/M
3300027030\|Ga0208240_1024056	Not Available	667	Open in IMG/M
3300027096\|Ga0208099_1048875	Not Available	604	Open in IMG/M
3300027879\|Ga0209169_10336223	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300027884\|Ga0209275_10367922	Not Available	807	Open in IMG/M
3300027889\|Ga0209380_10012462	All Organisms → cellular organisms → Bacteria	4902	Open in IMG/M
3300027889\|Ga0209380_10181529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1234	Open in IMG/M
3300027898\|Ga0209067_10430110	Not Available	742	Open in IMG/M
3300028781\|Ga0302223_10169713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300028906\|Ga0308309_10270949	Not Available	1427	Open in IMG/M
3300028906\|Ga0308309_10965033	Not Available	739	Open in IMG/M
3300029636\|Ga0222749_10483096	Not Available	668	Open in IMG/M
3300030730\|Ga0307482_1255308	Not Available	551	Open in IMG/M
3300031040\|Ga0265754_1031096	Not Available	550	Open in IMG/M
3300031543\|Ga0318516_10322794	Not Available	892	Open in IMG/M
3300031544\|Ga0318534_10555233	Not Available	654	Open in IMG/M
3300031549\|Ga0318571_10314351	Not Available	592	Open in IMG/M
3300031561\|Ga0318528_10001845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8340	Open in IMG/M
3300031564\|Ga0318573_10692060	Not Available	548	Open in IMG/M
3300031640\|Ga0318555_10303688	Not Available	864	Open in IMG/M
3300031680\|Ga0318574_10506522	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300031708\|Ga0310686_114635034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4177	Open in IMG/M
3300031708\|Ga0310686_115987590	Not Available	802	Open in IMG/M
3300031715\|Ga0307476_10034214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3398	Open in IMG/M
3300031718\|Ga0307474_10192058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1552	Open in IMG/M
3300031736\|Ga0318501_10174133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1117	Open in IMG/M
3300031769\|Ga0318526_10350853	Not Available	603	Open in IMG/M
3300031823\|Ga0307478_10093001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2322	Open in IMG/M
3300031893\|Ga0318536_10477700	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031954\|Ga0306926_11747452	Not Available	708	Open in IMG/M
3300031962\|Ga0307479_10977288	Not Available	817	Open in IMG/M
3300032035\|Ga0310911_10788888	Not Available	549	Open in IMG/M
3300032067\|Ga0318524_10478614	Not Available	652	Open in IMG/M
3300032076\|Ga0306924_10567711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1287	Open in IMG/M
3300032160\|Ga0311301_10406854	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2080	Open in IMG/M
3300032770\|Ga0335085_10840477	Not Available	1006	Open in IMG/M
3300032770\|Ga0335085_12562373	Not Available	505	Open in IMG/M
3300032898\|Ga0335072_10013913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11443	Open in IMG/M
3300033818\|Ga0334804_006971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4876	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.32%
Host-Associated	Host-Associated	2.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.29%
Aquatic	Environmental → Aquatic	8.04%
Plants	Host-Associated → Plants	2.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.50%
Freshwater	Environmental → Aquatic → Freshwater	5.36%
Sediment	Environmental → Aquatic → Sediment	2.68%
Peat	Environmental → Terrestrial → Peat	1.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.57%
Loam	Environmental → Terrestrial → Soil → Loam	22.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.04%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	10.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100703251	3300003505	Forest Soil	VPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLAGHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG*
JGIcombinedJ51221_101669542	3300003505	Forest Soil	MPDIDRTADIKVTADQGPVTAEIPLAGHASKHWLEFFSGLASRDRHQLHAEAEDREDRAWVIVWLPSAGPDFQPEPMLDAARALISQANGMEQQFQSGAAQIEGAVRGWWARQQ*
Ga0062386_1005271952	3300004152	Bog Forest Soil	MPDIDRTADIKVTAAQGTVTADIPLAGHASKYWLEFFSGLVSQDRHQLHAEAEDREDRAWVIVWLPSAGPDFHPEPMLDAARALISQANGMEQQFQSGAAQIEGAVRGWWARQQQ*
Ga0062388_1006348741	3300004635	Bog Forest Soil	MPDIDRTADIKVTADQGPVTAEIPLAGHASKHWLEFFSGLVSQDRHQLHAEAEDREDRAWVIVWLPSAGPDFQPGPVLDAARALISQANGMEQQFQSGAAQIEGAVRGWWARQQQ*
Ga0070709_118086391	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIDRTADIKVIAGQGAVNAEIPLAGHASEHWLQIFYSLVSKRKQDLRAEAEDREDRTWVIVMLPGTLPGHHPEPALNAARELIGEATGMDGQFQSGAAQTEAAIRDWWARQ*
Ga0070714_1018102871	3300005435	Agricultural Soil	VTAEIPLAGHASGHWRELFGELASKRMRELNVEAKEREDRTWVIVWLPSRPDFHPEPMLDAVSALISEVNGLEQQSQSGATQIEAAIRS
Ga0070708_1000562013	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIDRTADVKVTAAHGTVTAEIPLAGHASEHWLELFRSLASKQMQEFRAEAEDREDRTWVIVKLLGALPDHSPEPMLDATRGLIGQVSGLEEQFQSGAAQTEAAVRSWWARQQR*
Ga0070706_1002660153	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIDRTADVKVTAAHGTVTAEIPLAGHASEHWLELFRSLASKQMQEFRAEAEDREDRTWVIVKLLGALPDHSPEPMLDAARGLIGQVSGLEEQFQSGAAQTEAAVRSWWARQQR*
Ga0070707_1000344616	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIDRTADVKVTAAHGTVTAEIPLAGHASEHWLELFRSLASKQMQEFRAEAEDREDRTWVIVKLPGALPDHSPEPMLDAARGLIGQVSGLEEQFQSGAAQTEAAVRSWWARQQR*
Ga0070762_106846341	3300005602	Soil	MPDIDRIADIKVTAGQGPVTAEIPLAGHASGHWRELFRKLATKRRQEFHAEAEEREDRTWVIVWLPSARPDFHPEPMLDAVSALISEVNGLEQQSQSGAARIE
Ga0070763_109758281	3300005610	Soil	MPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLTPHGMQGSRAEAEEREDRTWVIVWLSPTRPDFHPELTLDAASAPISQINGAEQEWQSGAAQIETAVRSWWARQQG*
Ga0070764_101904202	3300005712	Soil	MPDIDRTADIKVNADREMVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGAEQEWQSGAAQIETAVRSWWARQQG*
Ga0070766_101182313	3300005921	Soil	VTAEIPLAGHASGHWRELFRKLATKRRQEFHAEAEEREDRTWVIVWLPSARPDFHPEPMLDAVSALISEVNGLEQQSQSGAARIEPAIRRWWARQQR*
Ga0070766_103303831	3300005921	Soil	MPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLTPHGMQGSRAEAEEREDRTWVIIWLSPTRPDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG*
Ga0066790_100047143	3300005995	Soil	MPDIDRTVDIKVTAGRGPVTAEIPLAGHASGHWRELFGELASKRMRELNVEAEEREDRTWVIVWLPSRPDFHPEPMLDAVSALISEVNGLEQQSQSGATQIEAAIRSWWARQQR*
Ga0075028_1009888331	3300006050	Watersheds	SADIKVTAGQGPVTAEIPLAGHASGHWQDLFRKLATKRMRQLHAEAEDREDRTWVIVWLPSARPDFHPEPMLDAVSALISEVNGLEQQSQSGAAQIEPAIRGWWARQQR*
Ga0075017_1006269353	3300006059	Watersheds	MPDIDRTADIKVIAGQGAVNAEIPLTGHASEHWLRIFHSLVSKRMQELRAEAEDREDRTWVIVMLPGALPDHHPESALDAARALIGEATGLDDQFQSGAAQTETAIRDWWARQ*
Ga0070712_1002439373	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIDRTADIKVIAGQGAVNAEIPLTGHASEHWLQIFHSLVSKRKQDLRAEAEDREDRTWVIVMLPGTLPGHHPESALDAARELIGEATGMDDQFQSGAAQTEAAIRDWWARQ*
Ga0070765_1003624461	3300006176	Soil	MPDIDRTVDIKVNTDREMVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHAEPTLDAASALISQVNDAEQEWQSGAAQIEAAVRSWWARQQG*
Ga0075424_1012236982	3300006904	Populus Rhizosphere	MPDIDRTADLKVTADQGTVTVEIPLAGRASEHWRDIFRKLASKRTPELHAKAEEQEDRTWVIVLLPSRPDFHPEPMLDAVTALISEVNGLEQQSHSGAAQIEAAVRRWWAPQQR*
Ga0116214_12048441	3300009520	Peatlands Soil	MPDIDRAADIKVIAGQGPVTAEIPLAGHASEHWRDLFRKLATKRMQEFNAEAEEREDRTWVIVWLSPTRPDFHPEPTLDAASALISQVNDAEQEWQSGAAQIEAAVRSWWARQQR*
Ga0126373_109593732	3300010048	Tropical Forest Soil	VTAEIPLAGHASEHWLELFRSLASQRMRELHTEAEEREDRTWVIVWLPSARPDFDPASALDAAHAVIREVNGIDQQFQSGAVQIEAAIRDWWTRQQR*
Ga0126378_122534341	3300010361	Tropical Forest Soil	MPDIDRTADIKVTAAHGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAEEREDRTWVIVWLPSARPDFDPASALDAAHAVIREVNGIDQQFQSGAVQIEAAIRDWWTRQQR*
Ga0126379_138442891	3300010366	Tropical Forest Soil	MPDIDRTADIKVTAAHGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAEEREDRTWVIVWLPSARPDFDPASALDAAHAVIREVNGIDQQFQSGAVQIEAAIRDWWTRQKR*
Ga0126381_1013474772	3300010376	Tropical Forest Soil	MPDIDRTADIKVTAAHGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAEERGDRTWVIVWLPSARPDFDPASALDAAHAVIREVNGIDQQFQSGAVQIEAAIRDWWTRQQR*
Ga0136449_1003087771	3300010379	Peatlands Soil	MPDIDRTADIKVIAGQGAVNAEIPLAGHASEHWLQIFHSLVSKRKQDLRAEAEDREDRTWVIVMLPGILPGHHPESALNAARALIGEATGMDDQFQSGAAQTEAAIRDWWARQ*
Ga0136449_1006492832	3300010379	Peatlands Soil	MPDIDRAADIKVIAGQGPVTAEIPLAGHASEHWRDLFRKLATKRMQEFNAEAEEREDRTWVIVWLPSRPDFHPEPMLDDVTALISEVNGLEQQFQSGAARIEAAIRGWWARQQR*
Ga0136449_1026421321	3300010379	Peatlands Soil	RTVDIKVNADREMVTAEIPLAGDASEHWRELFGKLAGHGMQGSRAEAEEREDRTWVIVWLSPTRQDFHPEPTLDAASALISQVNDAEQEWQSGAAQIEAAVRSWWARQQG*
Ga0126350_116474671	3300010880	Boreal Forest Soil	MPDIDRTVDIKVNADRALVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEQREDRTWVIVWLSPARPDHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG*
Ga0150983_134961051	3300011120	Forest Soil	MPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLTPHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG*
Ga0157374_116599221	3300013296	Miscanthus Rhizosphere	VNAEIPLAGHASEHWLQIFHSLVSKRKQDLRAEAEDREDRTWVIVMLPGTLPSHHPESALDAARELIGEATGMDDQFQSGAAQAEAAIRDWWARQ*
Ga0182030_101089092	3300014838	Bog	MPDIDRSADIKVTAGQGPVTAEIPLAGHASGHWQDLFRELATKRMRQLHAEAEDREDRTWVIVWLPSARPDFHPEPMLDAVSALISEVNGLEQQSQSGAAQIEPAIRRWWAQQQR*
Ga0132258_118740431	3300015371	Arabidopsis Rhizosphere	MPDIDRTADIKVIAGQGAVNAEIPLAGHASEHWLQIFHSLVSKRKQDLRAEAEDREDRTWVIVMLPGTLPGHHPESALNAARELIGEATGMDDQFQSGAAQAEAAIRDWWARQ*
Ga0182033_111797601	3300016319	Soil	MPDIDRTADIKVTAAHGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAKEREDRTWVIVWLPSARPDFDPASALDAAYAVIREVNGIDQQFQSGAVQIEAAIRDWW
Ga0187812_11850241	3300017821	Freshwater Sediment	MPDIDRTVDLKVTADQGTVTVEIPLAGHASEHWRDIFRKLASKRTPELHAKAEEQEDRTWVIVLLPSRPDFRPEPMLDAVTALISEVNGLEQQSHSGAAQIEAAVRRWWAPQQR
Ga0187807_12658601	3300017926	Freshwater Sediment	MPDIDRTADVKVTVAQEKVTAEIPLAGHASKHWLEFFSALVSQDRHQLNAQAEDREDRAWVTVWLPSAGPDFNPEPMLDAARALISQANGMEQQFQSGAAQIEGAVRAWWARQ
Ga0187809_101506271	3300017937	Freshwater Sediment	MPDIDRTVDLKVTADQGTVTVEIPLAGHASEHWRDIFRKLASKRTPELHAKAEEQEDRTWVIVLLPSRPDVRPVPMLDAVTALISEVNGLEQQSHSGAAQIEAAVRRWWAPQQR
Ga0187879_106941351	3300017946	Peatland	MPDIDPTVDIKVAVGRGPVTAEIPLAGHASGHWRELFGELASKRMRELNVEAEEREDRTWVIVWLPSRPDFHPEPMLDGVSALISEVNGLEQQSQSGATQIEAAIRSWWARQQRGASAGSCPR
Ga0187779_110133191	3300017959	Tropical Peatland	MPDIDHTADIRVTAAEATVTAEIPLAGHASEQWRELFGSQVSLDRHQLHAEAEDREDRTWVIVWLPSARPDFNPEPMLDAARALISQANGMEQQSQSAAAQIEAAVRVWWARQQR
Ga0187778_104993321	3300017961	Tropical Peatland	MPDIDRTADIKVTAAQATVTAEIPLAGHASEQWRELFGSQVSQDRRQLHAEVEDREDRTWVIVWLPSARPDFNPEPVLDAARALISQANDMEQQSQSAVAQIEAAVRVWWARQQR
Ga0187781_111224711	3300017972	Tropical Peatland	ASQATVTAEIPLAGHASKQWRELFGGLVSQDRHQLHAEAEDREDRTWVIVWLPSASPDFNPEPMLDAARALISQASGMEQQSQSVAAQIEAAVRMWWARQQR
Ga0187780_105110271	3300017973	Tropical Peatland	MPDIDRTADIKVTAAQATVTAEIPLAGHASEQWREHFGGLVSQDRHQLHAEAEDREDRTWVIVWLPSASPDFTPEPVLDAARALISQANGMEQESQSAAAQIEAAVRVWWARQQR
Ga0187782_114013651	3300017975	Tropical Peatland	MPDIDRTADIKVTSDHGTVTAEIPLAGHASEHWLVLFRELVSKRGNALHAEAEDREDRTWVVVWLPGTLPDLHPESALDAARALIGEAAGKDEQFQSGAAQNEAAIRGWWARQR
Ga0187765_106155531	3300018060	Tropical Peatland	MPDIDHTADIRVTAAEATVTAEIPLAGHASEQWRELFGSQVSLDRHQLHAEAEDREDRTWVIVWLPSASPDFNPEPVLDAARALISQANDMEQQSQSVAARIEAAVRVWWARQQR
Ga0187772_100200404	3300018085	Tropical Peatland	MPDIDRTADIRVTAAQATVTAEIPLAGHASEQWRELFGSQVSLDRHQLHAEVEDREDRTWVIVWLPSASPDFNPEPVLDAARALISQANGMEQESQSAAAQIEAAVRVWWARQQR
Ga0210407_103388532	3300020579	Soil	MPDIDRTADLKVTADQGTVTVEIPLAGRASEHWRDIFRKLASKRTPELHAKAEEQEDRTWVIVLLPSRPDFHPEPMLDAVTALISEVNGLEQQSHSGAAQIEAAVRRWWAPQQR
Ga0210403_106655531	3300020580	Soil	MPDIDRTVDIKVNADHGMVTAEIPLAGHASEHWRELFGKLTPHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEATLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG
Ga0210399_107028161	3300020581	Soil	MPDIDRTVDIKVAAGRGSVTAEIPLAGHASGHWRELFGELASKRMRELNVEAEEREDRTWVIVWLPSRPDFHTEPMLDAVSALISEVNGLEQQSQSGATQIEAAIRSWWARQQR
Ga0210395_101342194	3300020582	Soil	VPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLAGHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQG
Ga0210395_106704481	3300020582	Soil	RAVFSLDNQSCRREGRLAPMPDIDRTVDIKVNTDREMVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRPDFHPELTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQG
Ga0210401_104690271	3300020583	Soil	VPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLAGHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG
Ga0210401_105294702	3300020583	Soil	MPDIDRTVDIKVNADREMVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRPDFHPELTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQG
Ga0210405_102008891	3300021171	Soil	VPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLTPHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG
Ga0210405_104488661	3300021171	Soil	MPDIDRTADVKVTVAQEKVTAEIPLAGHASKHWLEFFSALVSQDRHQLNAQAEDREDRAWVIVWLPSAGPDFNPEPMLDAARALISQANGIEQQFQSGAAQIEGAVRAWWARQ
Ga0210396_117620301	3300021180	Soil	MPDIDRTVDIKVNTDREMVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRPDFHPELTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQG
Ga0210388_103419793	3300021181	Soil	MPDIDRTVDIKVNADREMVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQG
Ga0210385_106113171	3300021402	Soil	RAVFSLGNESCRREGRLAPVPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLAGHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQG
Ga0210389_102525032	3300021404	Soil	RTTMPDIDRTADLKVTADQGTVTVEIPLAGRASEHWRDIFRKLASKRTPELHAKAEEQEDRTWVIVLLPSRPDFHPEPMLDAVTALISEVNGLEQQSHSGAAQIEAAVRRWWAPQQR
Ga0210387_100946401	3300021405	Soil	MPDIDRTVDIKVNADREMVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG
Ga0210387_112851341	3300021405	Soil	MPDIDRTADLKVTADQGTVTVEIPLAGRASEHWRDIFRKLASKRTPELHAKAEEQEDRTWVIVLLPSRPDFHPEPMLDAVTALISEVNGLEQQSH
Ga0210386_100570272	3300021406	Soil	VAAAVAVTVAVSSGPIRAVFSLDNQSCRREGRLAPVPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLAGHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG
Ga0210386_101032636	3300021406	Soil	MPDIDRTVDIKVNTDREMVTAEIPLAGHTSEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRPDFHPELTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWAR
Ga0210383_102396401	3300021407	Soil	MVTAEIPLAGHASEHWRELFGKLAGHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG
Ga0210383_109031941	3300021407	Soil	MPDIDRTVDIKVNTDREMVTAEIPLAGHTSEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRPDFHPELTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQG
Ga0210394_110777341	3300021420	Soil	MPDIDRTVDIKVNADRGMMTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRQDFHPEPTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQG
Ga0210402_102894932	3300021478	Soil	MPDIDRTADLKVTADQGTVTVEIPLAGRASEHWRDIFRKLASKRTPELHAKAEEQEDRTWVIVLLPSRPDFHPEPMLDAVTALISEVNSLEQQSHSGAAQIEAAVRRWWAPQQR
Ga0210410_106784292	3300021479	Soil	MPDIDRTVDIKVNTDREMVTAEIPLAGHTSEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRPDFHPELTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQGWRPTARPFDP
Ga0126371_101709581	3300021560	Tropical Forest Soil	VTAEIPLAGHASEHWLELFRSLASQRMRELHTEAEEREDRTWVIVWLPSARPDFDPASALDAAHAVIREVNGIDQQFQSGAVQIEAAIRDWWTRQQR
Ga0222756_10570321	3300022709	Soil	MPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLTPHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG
Ga0242661_11452601	3300022717	Soil	CESGLTLDYGRSRQCSLACRRDGRLAPMPDIDRTVDIKVNTDREMVTAEIPLAGHTSEHWRELFGKLTPHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG
Ga0224564_11058441	3300024271	Soil	MPDIDRTVDIKVNADGGMVTAEIPLAGHASEHWRELFGKLAGHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISRVNGVEQEWQSGAAQIEAAVRSWWARQQG
Ga0207684_100581403	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIDRTADVKVTAAHGTVTAEIPLAGHASEHWLELFRSLASKQMQEFRAEAEDREDRTWVIVKLPGALPDHSPEPMLDAARGLIGQVSGLEEQFQSGAAQTEAAVRSWWARQQR
Ga0207693_102539642	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIDRTADIKVIAGQGAVNAEIPLTGHASEHWLQIFHSLVSKRKQDLRAEAEDREDRTWVIVMLPGTLPGHHPESALDAARELIGEATGMDDQFQSGAAQTEAAIRDWWARQ
Ga0209839_100814071	3300026294	Soil	MPDIDRTVDIKVTAGRGPVTAEIPLAGHASGHWRELFGELASKRMRELNVEAEEREDRTWVIVWLPSRPDFHPEPMLDAVSALISEVNGLEQQSQSGATQIEAAIRSWWARQQR
Ga0208240_10240561	3300027030	Forest Soil	MPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG
Ga0208099_10488751	3300027096	Forest Soil	MPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLAGHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQG
Ga0209169_103362232	3300027879	Soil	DIKVNADREMVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQG
Ga0209275_103679221	3300027884	Soil	MPDIDRIADIKVTAGQGPVTAEIPLAGHASGHWRELFRKLATKRRQEFHAEAEEREDRTWVIVWLPSARPDFHPEPMLDAVSALISEVNGLEQQSQSGAARIEPAIRRWWARQQR
Ga0209380_100124621	3300027889	Soil	VTAEIPLAVHASGHWRELFRKLATKRRQEFHAEAEEREDRTWVIVWLPSARPDFHPEPMLDAVSALISEVNGLEQQSQSGAARIEPAIRRWWARQQR
Ga0209380_101815291	3300027889	Soil	MPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLTPHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQG
Ga0209067_104301101	3300027898	Watersheds	MPDIDRTADIKVTAAQGTVTAEIPLAGHASKHWLDFFSSLVSQDRHQLHAEAEDREDRAWVIVWLPSAGPDFHPEPMLDAARALISQANGMEQQFQSGAAQIEGAVRGWWARQ
Ga0302223_101697132	3300028781	Palsa	MPDIDRTADIKVTADQGTVTAEIPLAGHASKHWLEFFSGLVSLDRHQLHAEAEDREDRAWVIVWLPSAGPDFQPEPMLDAARALISQANGMEQQFQSGAAQIEGAVRGWWARQQQ
Ga0308309_102709492	3300028906	Soil	VTAEIPLAGHASGHWRELFRKLATKRRQEFHAEAEEREDRTWVIVWLPSARPDFHPEPMLDAVSALISEVNGLEQQSQSGAARIEPAIRRWWARQQR
Ga0308309_109650331	3300028906	Soil	CAVRRAGHRLVDPGPCESGLTLDHGRSRQCSLACRREGRLAPMPDIDRTVDIKVNTDREMVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHAEPTLDAASALISQVNDAEQEWQSGAAQIEAAVRSWWARQQG
Ga0222749_104830961	3300029636	Soil	MPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLTPHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRNWWARQQG
Ga0307482_12553081	3300030730	Hardwood Forest Soil	VTAEIPLAGHASEHWRELFGKLTPHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG
Ga0265754_10310961	3300031040	Soil	MPDIDRTVDIKVNADHGMVTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEQREDRTWVIVWLSPTRQDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRGWWARQQG
Ga0318516_103227941	3300031543	Soil	MPDIDRTADIKVTAARGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAEERADRTWVIVWLPSTRPDFDPAQVLDAAHAVIREVNGIDQQFQSGAVQIEAAIRDWWTRQQR
Ga0318534_105552331	3300031544	Soil	MPDIDRTADIKVTAAHGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAKEREDRTWVIVWLPSARPDFDPASALDAAYAVIREVNGIDQQFQSGAVQIEAAIRDWWTRQQR
Ga0318571_103143511	3300031549	Soil	MPDIDRTADIKVTAARGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAEERADRTWVIVWLPSTRPDFDPAQVLDAAHAVIREVNGIDQQFQSGAAQIEAAVRDWWTHQQR
Ga0318528_100018453	3300031561	Soil	MPDIDRTVDIKVTAGQGPVTAEIPLAGHASGHWRELFSELTSKRRRELHAEAEEREDRTWVIVWLPSARPDFDPEPMLDAVSALISEANGIEQQSQSGAAQIETAIRRWWARQQR
Ga0318573_106920601	3300031564	Soil	TAEIPLAGHASEHWLELFRSLASQRMRELHTEAKEREDRTWVIVWLPSARPDFDPASALDAAYAVIREVNGIDQQFQSGAVQIEAAIRDWWTRQQR
Ga0318555_103036881	3300031640	Soil	MPDIDRTADIKVSAALRGTVTAEIPLAGHASEHWLELFRMLAAERSQELRADAQDREDRAWVIVRLAGTLPDHPPESALDAARALIGEATGKEEQFRSDAAQTEAGIRSWWARQR
Ga0318574_105065221	3300031680	Soil	MPDIDRTADIKVTAAHGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAKEREDRTWVIVWLPSARPDFDPASALDAAYAVIREVNGIDQQFQSGAVQIEAAIRDWWTRQQ
Ga0310686_1146350343	3300031708	Soil	MPDIDRTAEIKVTAAQETVTAEIPLAGHASKHWLEFFSGLVSLDRHQLHAEAEDREDRAWVIVWLPSAGPDFHPEPMLDAARALISQANGMEQQFQSGAAQIEGAVRGWWARQQQ
Ga0310686_1159875901	3300031708	Soil	MPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLAGHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPEPTLDAASALISQVNGVEQEWQSGAAQIEAAVRSWWARQQG
Ga0307476_100342142	3300031715	Hardwood Forest Soil	VPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLAGHGMQGSRAEAEEREDRTWVIVWLSPTRLDLHPEPELDAASALISQVNAAEQEWQSGAAQIEAAVRSWWARQQGERPARRSP
Ga0307474_101920581	3300031718	Hardwood Forest Soil	MPDIDRTVDINVNADRGMVTAEIPLTGHASEHWRELFGKLAGHGMQGSRAEAEKREDRTWVIWLSPARLDFHPEPTLDAASALITQVNGVEQEWQSGAAQIEAAVRSWWARRQG
Ga0318501_101741331	3300031736	Soil	MPDIDRTADIKVTAARGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAEERADRTWVIVWLPSTRPDFDPAQVLDAAHAVIREVNGIDQQFQSGAAQNEAAVRDWWTHQQR
Ga0318526_103508531	3300031769	Soil	MPDIDRTVDIKVTAGQGPVTAEIPLAGHASGHWRELFSELTSKRRRELHAEAEEREDRTWVIVWLPSARPDFDPEPMLDAVSALISEANGIEQQSQSGAAQI
Ga0307478_100930011	3300031823	Hardwood Forest Soil	IKVNVDREMMTAEIPLAGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRLDLHPEPELDAASALISQVNAAEQEWQSGAAQIEAAVRSWWARQQG
Ga0318536_104777001	3300031893	Soil	VYAAAQGNPAENRDLNPGGCYHPTDRTADIKVTAAHGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAKEREDRTWVIVWLPSARPDFDPASALDAAYAVIREVNGIDQQFQSGAV
Ga0306926_117474521	3300031954	Soil	ARGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAEERADRTWVIVWLPSTRPDFDPAQVLDAAHAVIREVNGIDQQFQSGAAQIEAAVRDWWTHQQR
Ga0307479_109772881	3300031962	Hardwood Forest Soil	MPDIDRTVDIKVNADRGMVTAEIPLAGHASEHWRELFGKLTPHGMQGSRAEAEEREDRTWVIVWLSPTRLDFHPGPTLDAASALISQVNGAEQEWQSGAAQIEAAVRSWWARQQR
Ga0310911_107888881	3300032035	Soil	MPDIDRTADIKVTAARGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAEERADRTWVIVWLPSTRPDFDPAQVLDAAHAVIREVNGIDQQFQSGAAQIEAAV
Ga0318524_104786141	3300032067	Soil	MPDIDRTVDIKVTAGQGPVTAEIPLAGHASGHWRELFSELTSKRRRELHAEAEEREDRTWVIVWLPSARPDFDPEPMLDAVSALISEANGIEQQSQ
Ga0306924_105677111	3300032076	Soil	MPDIDRTADIKVTAARGTVTAEIPLAGHASEHWLELFRSLASQRMRELHTEAKEREDRTWVIVWLPSARPDFDPASALDAAYAVIREVNGIDQQFQSGAAQIEAAVRDWWTHQQR
Ga0311301_104068543	3300032160	Peatlands Soil	MPDIDRAADIKVIAGQGPVTAEIPLAGHASEHWRDLFRKLATKRMQEFNAEAEEREDRTWVIVWLPSRPDFHPEPMLDDVTALISEVNGLEQQFQSGAARIEAAIRGWWARQQR
Ga0335085_108404771	3300032770	Soil	MPDIDRTADIRVTAAQATVTAEIPLAGHASEQWREFFGSQVSLDRHQLHAEVEDREDRTWVIVWLPSASPDFNPDPMLDAARGLISQANGMEQESQSAAAQIEAAVRVWWARQQR
Ga0335085_125623731	3300032770	Soil	MPDIDRTADLKVTADQGTVTVEIPLAGRASEHWRDIFRKLASKRTPELHAKAEEQEDRTWVIVLLPSRPDFHPEPMLDAVTALISEVNGLEQQSHSGAAQIEAAIRRWWAPQQR
Ga0335072_1001391310	3300032898	Soil	MPDIDRTVDIKVNADRGMVTAEIPLPGHASEHWRELFGKLAAHGMQGSRAEAEEREDRTWVIVWLSPTRPDFHPEPTLDAASALISQVNGAEQEWQSGAARIEAAVRSWWARQQ
Ga0334804_006971_3188_3535	3300033818	Soil	MPDIDRSADIKVTAGQGPVTAEIPLAGHASGHWQDLFRELATKRMRQLHAEAEDREDRTWVIVWLPSARPDFHPEPMLDAVSALISEVNGLEQQSQSGAAQIEPAIRRWWAQQQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084552

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences