Metagenome / Metatranscriptome Family F084604

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084604
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	71 residues
Representative Sequence	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW
Number of Associated Samples	98
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.14 %
% of genes near scaffold ends (potentially truncated)	29.46 %
% of genes from short scaffolds (< 2000 bps)	77.68 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.071 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.214 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 39.44% Coil/Unstructured: 60.56%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF08327	AHSA1	4.46
PF00768	Peptidase_S11	4.46
PF03734	YkuD	4.46
PF03401	TctC	3.57
PF13561	adh_short_C2	1.79
PF01895	PhoU	1.79
PF00296	Bac_luciferase	1.79
PF03707	MHYT	1.79
PF04392	ABC_sub_bind	0.89
PF14226	DIOX_N	0.89
PF01614	IclR	0.89
PF00583	Acetyltransf_1	0.89
PF00107	ADH_zinc_N	0.89
PF06147	DUF968	0.89
PF16576	HlyD_D23	0.89
PF03404	Mo-co_dimer	0.89
PF16640	Big_3_5	0.89
PF13179	DUF4006	0.89
PF00498	FHA	0.89
PF00753	Lactamase_B	0.89
PF06779	MFS_4	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	4.46
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	4.46
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	4.46
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.57
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.79
COG3300	MHYT domain, NO-binding membrane sensor	Signal transduction mechanisms [T]	1.79
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.79
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.89
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.86 %
Unclassified	root	N/A	25.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	60.71 %
Unclassified	root	N/A	25.00 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.68 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.79 %
Unclassified	root	N/A	25.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.07 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.68 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.18 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.57 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	2.68 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.89 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.89 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.89 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.18 %
Pusillimonas (ex Stolz et al. 2005)	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005)	2.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.89 %
Ancylobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter	0.89 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.89 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.89 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.18 %
unclassified Pusillimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas	2.68 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.89 %
Sphingomonas jejuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas jejuensis	0.89 %
Ancylobacter dichloromethanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → Ancylobacter dichloromethanicus	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.89 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.18 %
Pusillimonas sp. ANT_WB101	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. ANT_WB101	2.68 %
Rhizobium freirei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei	0.89 %
Sphingomonas jejuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas jejuensis	0.89 %
Ancylobacter dichloromethanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → Ancylobacter dichloromethanicus	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.89 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.18 %
Pusillimonas sp. ANT_WB101	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. ANT_WB101	2.68 %
Rhizobium freirei PRF 81	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	0.89 %
Sphingomonas jejuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas jejuensis	0.89 %
Ancylobacter dichloromethanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → Ancylobacter dichloromethanicus	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.89 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17133657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1010	Open in IMG/M
3300000955\|JGI1027J12803_100532906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	836	Open in IMG/M
3300000956\|JGI10216J12902_112453886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300001867\|JGI12627J18819_10018855	All Organisms → cellular organisms → Bacteria	2802	Open in IMG/M
3300002245\|JGIcombinedJ26739_100031811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4681	Open in IMG/M
3300004479\|Ga0062595_100278124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1110	Open in IMG/M
3300004633\|Ga0066395_10305298	Not Available	871	Open in IMG/M
3300005179\|Ga0066684_10346725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	993	Open in IMG/M
3300005187\|Ga0066675_10026838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3330	Open in IMG/M
3300005332\|Ga0066388_100105758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3293	Open in IMG/M
3300005332\|Ga0066388_103241910	Not Available	831	Open in IMG/M
3300005332\|Ga0066388_106004674	Not Available	613	Open in IMG/M
3300005332\|Ga0066388_106854425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300005332\|Ga0066388_107192979	Not Available	559	Open in IMG/M
3300005366\|Ga0070659_102136518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	503	Open in IMG/M
3300005434\|Ga0070709_10060215	All Organisms → cellular organisms → Bacteria → Proteobacteria	2412	Open in IMG/M
3300005435\|Ga0070714_101351518	Not Available	696	Open in IMG/M
3300005436\|Ga0070713_100548395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1094	Open in IMG/M
3300005467\|Ga0070706_100112224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2537	Open in IMG/M
3300005467\|Ga0070706_100295634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1511	Open in IMG/M
3300005553\|Ga0066695_10343152	Not Available	937	Open in IMG/M
3300005557\|Ga0066704_10503255	Not Available	797	Open in IMG/M
3300005764\|Ga0066903_100030707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6066	Open in IMG/M
3300005764\|Ga0066903_106473463	Not Available	610	Open in IMG/M
3300005983\|Ga0081540_1055553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1928	Open in IMG/M
3300006028\|Ga0070717_10054248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3305	Open in IMG/M
3300006031\|Ga0066651_10791988	Not Available	514	Open in IMG/M
3300006034\|Ga0066656_10102754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1738	Open in IMG/M
3300006173\|Ga0070716_101270686	Not Available	594	Open in IMG/M
3300006175\|Ga0070712_100020159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4360	Open in IMG/M
3300006178\|Ga0075367_10317080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	982	Open in IMG/M
3300006796\|Ga0066665_10985175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300006797\|Ga0066659_10049487	All Organisms → cellular organisms → Bacteria → Proteobacteria	2643	Open in IMG/M
3300006845\|Ga0075421_102405901	Not Available	551	Open in IMG/M
3300006852\|Ga0075433_10559940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1004	Open in IMG/M
3300006852\|Ga0075433_11245887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	645	Open in IMG/M
3300006854\|Ga0075425_100584710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1284	Open in IMG/M
3300006969\|Ga0075419_11151570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300007255\|Ga0099791_10054290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. ANT_WB101	1798	Open in IMG/M
3300007265\|Ga0099794_10295623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. ANT_WB101	838	Open in IMG/M
3300009088\|Ga0099830_10544961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	949	Open in IMG/M
3300009089\|Ga0099828_10911405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300009094\|Ga0111539_11292769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	847	Open in IMG/M
3300009143\|Ga0099792_10273820	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300009162\|Ga0075423_10845332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	969	Open in IMG/M
3300009792\|Ga0126374_10045418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2188	Open in IMG/M
3300009792\|Ga0126374_11277071	Not Available	592	Open in IMG/M
3300010046\|Ga0126384_10755516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	867	Open in IMG/M
3300010048\|Ga0126373_10860539	Not Available	970	Open in IMG/M
3300010048\|Ga0126373_12431102	Not Available	583	Open in IMG/M
3300010320\|Ga0134109_10245567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	673	Open in IMG/M
3300010360\|Ga0126372_10063042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2589	Open in IMG/M
3300010366\|Ga0126379_10121838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2371	Open in IMG/M
3300010371\|Ga0134125_13131530	Not Available	501	Open in IMG/M
3300011120\|Ga0150983_10489378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	709	Open in IMG/M
3300011120\|Ga0150983_13782696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	583	Open in IMG/M
3300011270\|Ga0137391_10107865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2413	Open in IMG/M
3300012096\|Ga0137389_10431453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. ANT_WB101	1127	Open in IMG/M
3300012180\|Ga0153974_1015890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1608	Open in IMG/M
3300012208\|Ga0137376_11548333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300012212\|Ga0150985_122286706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	643	Open in IMG/M
3300012361\|Ga0137360_10074679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2521	Open in IMG/M
3300012923\|Ga0137359_10877173	Not Available	775	Open in IMG/M
3300012960\|Ga0164301_10669486	Not Available	776	Open in IMG/M
3300012971\|Ga0126369_10246011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	1756	Open in IMG/M
3300015371\|Ga0132258_12321653	All Organisms → cellular organisms → Bacteria → Proteobacteria	1345	Open in IMG/M
3300018482\|Ga0066669_10160082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1669	Open in IMG/M
3300020579\|Ga0210407_10284183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1291	Open in IMG/M
3300021168\|Ga0210406_10079460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2808	Open in IMG/M
3300021168\|Ga0210406_10438215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1042	Open in IMG/M
3300021178\|Ga0210408_10344538	Not Available	1188	Open in IMG/M
3300021178\|Ga0210408_11260903	Not Available	562	Open in IMG/M
3300021286\|Ga0179583_1117618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	620	Open in IMG/M
3300021432\|Ga0210384_10067382	All Organisms → cellular organisms → Bacteria → Proteobacteria	3227	Open in IMG/M
3300021560\|Ga0126371_10035456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4700	Open in IMG/M
3300021560\|Ga0126371_11142692	Not Available	917	Open in IMG/M
3300024288\|Ga0179589_10026686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1981	Open in IMG/M
3300025898\|Ga0207692_10042832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2249	Open in IMG/M
3300025910\|Ga0207684_10683868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas jejuensis	873	Open in IMG/M
3300025922\|Ga0207646_11181949	Not Available	671	Open in IMG/M
3300025928\|Ga0207700_11873237	Not Available	526	Open in IMG/M
3300026555\|Ga0179593_1001836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2681	Open in IMG/M
3300027050\|Ga0209325_1032238	Not Available	627	Open in IMG/M
3300027071\|Ga0209214_1014422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	979	Open in IMG/M
3300027326\|Ga0209731_1028307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	806	Open in IMG/M
3300027548\|Ga0209523_1061057	Not Available	774	Open in IMG/M
3300027576\|Ga0209003_1059928	Not Available	688	Open in IMG/M
3300027605\|Ga0209329_1150512	Not Available	511	Open in IMG/M
3300028047\|Ga0209526_10007576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7471	Open in IMG/M
3300030902\|Ga0308202_1151642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	516	Open in IMG/M
3300030905\|Ga0308200_1124138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	573	Open in IMG/M
3300031039\|Ga0102760_10632162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	604	Open in IMG/M
3300031091\|Ga0308201_10166363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	703	Open in IMG/M
3300031092\|Ga0308204_10176057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	652	Open in IMG/M
3300031543\|Ga0318516_10404515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → Ancylobacter dichloromethanicus	786	Open in IMG/M
3300031544\|Ga0318534_10486991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300031545\|Ga0318541_10044378	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300031545\|Ga0318541_10062961	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300031573\|Ga0310915_10163550	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300031716\|Ga0310813_10544446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1020	Open in IMG/M
3300031719\|Ga0306917_10074663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2362	Open in IMG/M
3300031720\|Ga0307469_10918700	Not Available	812	Open in IMG/M
3300031747\|Ga0318502_10183953	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300031753\|Ga0307477_10763828	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300031879\|Ga0306919_10146534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1718	Open in IMG/M
3300031894\|Ga0318522_10302367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	606	Open in IMG/M
3300031941\|Ga0310912_10658035	Not Available	813	Open in IMG/M
3300032035\|Ga0310911_10040577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2381	Open in IMG/M
3300032044\|Ga0318558_10094604	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1392	Open in IMG/M
3300032051\|Ga0318532_10100861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1017	Open in IMG/M
3300032076\|Ga0306924_10211401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2227	Open in IMG/M
3300032205\|Ga0307472_100569081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	993	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.39%
Host-Associated	Host-Associated	11.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.39%
Plants	Host-Associated → Plants	10.71%
Fungi	Host-Associated → Fungi	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.68%
Roots	Host-Associated → Plants → Roots	0.89%
Mycelium	Host-Associated → Fungi → Mycelium	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.71%
Loam	Environmental → Terrestrial → Soil → Loam	27.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01477660	2088090014	Soil	MRKVLGIAVVAISLIGGATVVLAQSSRNLMDVTGTEANRARTQYGPYTPGARSYAYVPRLHRRWHWSHRDRKSV
JGI1027J12803_1005329062	3300000955	Soil	MRKVLGIAVVAISLIGGATVVLAQSSRNLMDVTGTEANRARTQYGPYTPGARSYAYVPRLHRRWHWSHRHR*
JGI10216J12902_1124538862	3300000956	Soil	MRKILGIAVVAISLVCGATALLAQSSRDLTEVTGTEANRLRTQYGRYTPGARFYAYVHRLHRRWHWSHRRW*
JGI12627J18819_100188553	3300001867	Forest Soil	MRKVLGIAVVAMSLIGGATVVLAQSSRNLMDVTGTEANRARTQYGPYTPGARSYAYVPRVHRRWHWSHRHR*
JGIcombinedJ26739_1000318114	3300002245	Forest Soil	MRKILGIAAIAISLTSGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGSRAYAYSPRLHRRWHWSHRHW*
Ga0062595_1002781241	3300004479	Soil	RRGKFSLWRGNNSLRSSTMRKILGIAVVAISLVSGATAVLAQSSRDLTEVTGTEASRLRTQYGRYTPGARSYAAGSARAGSATP*
Ga0066395_103052982	3300004633	Tropical Forest Soil	MRKTLGIAVVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYGYAPRLHRRWHWSHRHR*
Ga0066684_103467253	3300005179	Soil	MRKILGIAVIAISLTGGATVALAQSSRNLMDVTGTEANRAKTQYGRYTPGSYAYAPRLHRRWHWSHHRRW*
Ga0066675_100268384	3300005187	Soil	MRKILGIAVIAVSLTGGATVALAQSSRNLMDVTGTEANRAKTQYGRYTPGSYAYAPRLHRRWHWSHHRRW*
Ga0066388_1001057583	3300005332	Tropical Forest Soil	MRKALSIAAVVISLTGGATVVLAQSSRDLTEVTGTEANRLKTQYGYYTPGSRSYAYAPRLHRRWHWSHRRW*
Ga0066388_1032419102	3300005332	Tropical Forest Soil	MRKILGIAVIAISLTGGATVVLAQSSRNLTEVTGTEANRLKTQYGRYTPGSYAYAPRLHRRWHWSHRRW*
Ga0066388_1060046742	3300005332	Tropical Forest Soil	MRKTLGIAAVAISLTSGVTVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYPPRLHRRWHWSHRHW*
Ga0066388_1068544252	3300005332	Tropical Forest Soil	MRKALAIAVVAISLTGGATVALAQSSRNLMDVTGTEANRARTQYGPYTPGARSYAYAPRLHR
Ga0066388_1071929791	3300005332	Tropical Forest Soil	MRKILGIAVIAISVTGGATVVLAQSSRDLTEVTGTEANRLRTQYGPYTPGRGSYAYAPRV
Ga0070659_1021365181	3300005366	Corn Rhizosphere	MRKVLGIAVVAISLIGDATVVLAQSSRNLMDVTGTEANRLQTQYGRYTPGSRSYAYAPRLHRRWHWSHRHR*
Ga0070709_100602153	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRKVLGIAVVAISLIGGATVVLAQSSRNLMDVTGTEANRLQTQYGRYTPGSRSYAYAPRLHRRWHWSHRHR*
Ga0070714_1013515181	3300005435	Agricultural Soil	ALAGEQQPEEFAMRKVLGIAVVAMSLTGGATVVLAQSSRNLMDVTGTEANRARTQYGPYTPGTRSYAYVPRVHRRW*
Ga0070713_1005483951	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW*
Ga0070706_1001122241	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHR*
Ga0070706_1002956342	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTLSIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW*
Ga0066695_103431522	3300005553	Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAYSPRLHRRWHWSHRH*
Ga0066704_105032552	3300005557	Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAYSPRLHRRWHWSHRH
Ga0066903_1000307077	3300005764	Tropical Forest Soil	MRKTLGIVAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW*
Ga0066903_1064734632	3300005764	Tropical Forest Soil	MRKTLGIAVIAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAYSPRLHRRWHWSHRH
Ga0081540_10555532	3300005983	Tabebuia Heterophylla Rhizosphere	MRKALGIAVIAIVLTGSATVTLAQSSRNLMEVTGTDANRAKTQYGRYTPGSYAYAPRLHRRWHWSHRRR*
Ga0070717_100542482	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTLGIAAVAISLTGGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRGYAYSPRLHRRWHWSHRRW*
Ga0066651_107919881	3300006031	Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAYSPRLHRRWHWSHR
Ga0066656_101027541	3300006034	Soil	MRKTLSIAAVAISLTSGATVVLAQSSRYLMEVTGTEANRAQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW*
Ga0070716_1012706861	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RKILGIAAIAISLTSGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGSRAYGYSPRLHRRWHWSHRHW*
Ga0070712_1000201592	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRKVLGIAVVAMSLTGGATVVLAQSSRNLMDVTGTEANRARTQYGPYTPGTRSYAYVPRVHRRWHWSHRHR*
Ga0075367_103170802	3300006178	Populus Endosphere	MRKALGIAVIAISLTSGATVALAQSSRNLMDVTGTEANRARTQYGPYTPGARSYAYVPRVHRRWHWSHRHR*
Ga0066665_109851752	3300006796	Soil	KTLGIAAVTISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGPYTPGSRAYAYSPRLHRRWHWSHRH*
Ga0066659_100494872	3300006797	Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW*
Ga0075421_1024059011	3300006845	Populus Rhizosphere	MRKVLGIAVVAISLIGGATVVLAQSSRNLMDVTGTEANRARTQYGPYTPGARSYAYVPRVHRRWHWSYRHR*
Ga0075433_105599403	3300006852	Populus Rhizosphere	MRKALGIAVIAISLTSGATVALAQSSRNLMDVTGTEANRARTQYGPYTPGVRSYAYAPRLHRRWHWSHRHR*
Ga0075433_112458872	3300006852	Populus Rhizosphere	MRKVLGIAVVAMSLIGGATVALAQSSRNLMDVTGTEANRARTQYGPYTPGARSYAYVPRVHRRWHWSHRHR*
Ga0075425_1005847101	3300006854	Populus Rhizosphere	VAISLIGGATVVLAQSSRNLMDVTGTEANRARTQYGPYTPGVRSYAYAPRLHRRWHWSHRHR*
Ga0075419_111515702	3300006969	Populus Rhizosphere	MRKSLGIAVLALSIMGGATVVLAQSTRSMMEVTGTEANRVKTQTGGGYYGPGYRSYAYRPGLHRRWHWSHRRW*
Ga0099791_100542902	3300007255	Vadose Zone Soil	MRKILGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRGYAYSPRLHRRWHWSHRHW*
Ga0099794_102956231	3300007265	Vadose Zone Soil	MRKILGIAAVAISLTSGATVVLAHSSRNLMEVTGTEANRVQTQYGRYTPGSRGYAYSPRSHRRWHWSHRHW*
Ga0099830_105449613	3300009088	Vadose Zone Soil	MRKTLGIAVVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRGYAYSPRLHRRWHWSHRHW*
Ga0099828_109114052	3300009089	Vadose Zone Soil	MRKTLGIAAVAISLTGGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRGYAYAPRLHRRWHWSHRHW*
Ga0111539_112927692	3300009094	Populus Rhizosphere	IAVVAISLIGGATVVLAQSSRNLMDVTGTEANRARTQYGPYTPGARSYAYVPRVHRRWHWSYRHR*
Ga0099792_102738201	3300009143	Vadose Zone Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRGYAYAPRLHRRWHWSHRHW*
Ga0075423_108453322	3300009162	Populus Rhizosphere	MRKALGIAVIAISLTSGATVALTQSSRNLMDVTGTEANRARTQYGPYTPGVRSYAYAPRLHRRWHWSHRHR*
Ga0126374_100454181	3300009792	Tropical Forest Soil	MRKTLGIAAVAISLTSGVTVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW*
Ga0126374_112770711	3300009792	Tropical Forest Soil	MRKILGIAVIAISLTGGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGARAYAYAPRLHRRWHWSHRRHW*
Ga0126384_107555161	3300010046	Tropical Forest Soil	MRKTLGIAAIAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRVHRRWHWSHRHR*
Ga0126373_108605391	3300010048	Tropical Forest Soil	MRKTLGIAVVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYGYAPRLHRRWHWFHRHR*
Ga0126373_124311021	3300010048	Tropical Forest Soil	MRKTLGIAAIAISLTSGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGVRAYGYSPRLHRRWHWSHRHW*
Ga0134109_102455671	3300010320	Grasslands Soil	MRKILGIAVIAISLTGGATVALAQSSRNLMDVTGTEANRAKTQYGRYTPGSYAYAPRLHR
Ga0126372_100630423	3300010360	Tropical Forest Soil	MRKTLGIAVVAISLTSGATVVLAQSSRNLMKVTGTEANRAQTQYGRYTPGSRAYGYAPRLHRRWHWSHRHR*
Ga0126379_101218383	3300010366	Tropical Forest Soil	MRKALAIAVVAISLTGGATVALAQSSRNLMDVTGTEANRARTQYGPYTPGAHSYAYAPRLHRRWHWSHHRRW*
Ga0134125_131315301	3300010371	Terrestrial Soil	MRKILGIAVVAISLVSGATAVLAQSSRDLTEVTGTEANRLRTQYGRYTPGARSYAYVPRLHRRWHPSHRRW*
Ga0150983_104893782	3300011120	Forest Soil	ANSALAGEQQPEEFAMRKVLGIAVVAISLIGGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRSYAYSPRLHRLWHGSHRRW*
Ga0150983_137826962	3300011120	Forest Soil	MRKVLGIAVVAISLIGGATVVLAQSSRNLMDVTGTEANRLPTQYGRYTPGSRSYAYAPRLHRRWHWSHRHR*
Ga0137391_101078652	3300011270	Vadose Zone Soil	MRKILGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRGYAYAPRLHRRWHWSHRHW*
Ga0137389_104314532	3300012096	Vadose Zone Soil	MRKTLGIAAVAISLTGGVTVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRGYAYSPRLHRRWHWSHRHW*
Ga0153974_10158902	3300012180	Attine Ant Fungus Gardens	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRGYAYSPRLHRRWHWSHRHW*
Ga0137376_115483332	3300012208	Vadose Zone Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGPYTPGSRAYAYSPRLHRRWHWSHRHW*
Ga0150985_1222867062	3300012212	Avena Fatua Rhizosphere	GEQQPEEFAMRKVLGIAVVAISLIGGATVVLAQSSRNLMDVTGTEANRLQTQYGRYTPGSRSYAYAPRLHRRWHWSHRHR*
Ga0137360_100746793	3300012361	Vadose Zone Soil	MRKILVIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW*
Ga0137359_108771732	3300012923	Vadose Zone Soil	MRKTLGIAAVAISLTGGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW*
Ga0164301_106694861	3300012960	Soil	MRKSLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGSRAYAHSPRLHRRWHWSHRHW*
Ga0126369_102460111	3300012971	Tropical Forest Soil	MRKTLGIAAIAISLTSGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGVRAYGYSPRLHRRWHWSHRRW*
Ga0132258_123216532	3300015371	Arabidopsis Rhizosphere	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRGYAYSPRLHRRWHWSHRHW*
Ga0066669_101600822	3300018482	Grasslands Soil	MRKILGIAVIAISLTGGATVALAQSSRNLMDVTGTEANRAKTQYGRYTPGSYAYAPRLHRRWHWSHHRRW
Ga0210407_102841831	3300020579	Soil	MRKVLGIAVVAISLIGGATVVLAQSSRNLMDVTGTEANRRQTQYGPYTPGARSYAYAPRLHRRWHWSHRRW
Ga0210406_100794603	3300021168	Soil	MRKMLGIAVVAVSLIGGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRSYAYSPRLHRLWHGSHRRW
Ga0210406_104382152	3300021168	Soil	MRKSLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGSRAYAHSPRLHRRWHWSHRHW
Ga0210408_103445381	3300021178	Soil	MRKILGIAAIAISLTSGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGSRAYGYSPRLHRRWHWSHRHW
Ga0210408_112609031	3300021178	Soil	MRKTLGIAAVTISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAYSP
Ga0179583_11176182	3300021286	Vadose Zone Soil	GKFSLWRGNNSLRSLTMRKMLGIAVVAVSLIGGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRSYAYSPRLHRRWHWSHRRW
Ga0210384_100673822	3300021432	Soil	MRKSLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGSRAYGYSPRLHRRWHWSHRHW
Ga0126371_100354565	3300021560	Tropical Forest Soil	MRKTLAIAVVAISLTGGATVALAQSSRNLMDVTGTEANRARTQYGPYTPGARSYAYAPRLHRRWHWSHHQRW
Ga0126371_111426921	3300021560	Tropical Forest Soil	MRKILGIAALAISLTSGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGARAYGYSPRLHRRWHWSHRRW
Ga0179589_100266862	3300024288	Vadose Zone Soil	MRKMLGIAVVAVSLIGGATVVLAQSSRNLMEVTGTEANRVHTQYGRYTPGSRSYAYSPRLHRRWHWSHRRW
Ga0207692_100428321	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AVVAISLIGGATVVLAQSSRNLMDVTGTEANRLQTQYGRYTPGSRSYAYAPRLHRRWHWSHRHR
Ga0207684_106838681	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW
Ga0207646_111819491	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRGYAYSPRLHRRWHWSHRRW
Ga0207700_118732371	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LRRGKFSLWRGNNSLRSSTMRKILGIAVVAISLVSGATAVLAQSSRDLTEVTGTEASRLRTQYGRYTPGARSYAAGSARAGSATP
Ga0179593_10018364	3300026555	Vadose Zone Soil	MRKILGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRGYAYSPRLHRRWHWSHRHW
Ga0209325_10322381	3300027050	Forest Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRGYAYSPRLHRRWHWSHRHW
Ga0209214_10144222	3300027071	Forest Soil	MRKILGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW
Ga0209731_10283072	3300027326	Forest Soil	MRKVLGIAVVAMSLIGGATVVLAQSSRNLMDVTGTEANRARTQYGPYTPGARSYAYVPRVHRRWHWSHRHR
Ga0209523_10610571	3300027548	Forest Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAHSPRLHRRWHGSHRHW
Ga0209003_10599282	3300027576	Forest Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW
Ga0209329_11505121	3300027605	Forest Soil	MRKILGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGSRAYAHSPRLHRRWHWSHRHW
Ga0209526_100075765	3300028047	Forest Soil	MRKILGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGSRAYGYSPRLHRRWHWSHRHW
Ga0308202_11516421	3300030902	Soil	GKFSLWRGNNGLRSLTMRKILGIAVVAVSLIGGATVVLAQSSRNLMEVTGTEANRLQTQYGRYTPGSRSYAYSPRLHRRWHWSHRR
Ga0308200_11241382	3300030905	Soil	MRKVLGIAVVAISLIGGATDVLAQSSRNLMDVTGTEANRRQTQYGPYTPGARSYAYAPRLHRRWHWSHRHR
Ga0102760_106321622	3300031039	Soil	GKFSLWRGNNSLRSSTMRKALAIAVVAISLTGGATVALAQSSRDLSDVTGSEANRARTQYGRYTPGARSYAYAPRLHRRWHWSHHRRW
Ga0308201_101663631	3300031091	Soil	GKFSSGGGQQPEEFAMRKVLGIAVVAISLIGGATDVLAQSSRNLMDVTGTEANRRQTQYGPYTPGARSYAYAPRLHRRWHWSHRHR
Ga0308204_101760572	3300031092	Soil	AMRKVLGIAVVAISLIGGATVVLAQSSRNLMDVTGTEANRLQTQYGRYTPGSRSYAYAPRLHRRWHWSHRHR
Ga0318516_104045152	3300031543	Soil	MRKTVGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAHSPRLHRRWHWSHRHW
Ga0318534_104869911	3300031544	Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLQRRWHWSHRHW
Ga0318541_100443782	3300031545	Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAHSPRLHRRWHWSHRHW
Ga0318541_100629615	3300031545	Soil	MRKTVGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLQRRWHWSHRHW
Ga0310915_101635501	3300031573	Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAYSPRLHRRWHWS
Ga0310813_105444461	3300031716	Soil	GIAVIAISLTSGATVALAQSSRNLMDVTGTEANRARTQYGPYTPGVRSYAYAPRLHRRWHWSHRHR
Ga0306917_100746633	3300031719	Soil	VRKTLGIVAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW
Ga0307469_109187001	3300031720	Hardwood Forest Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAYSPRFHRRWHWSHRHW
Ga0318502_101839533	3300031747	Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLHRRW
Ga0307477_107638282	3300031753	Hardwood Forest Soil	MRKTLGIAAVTISLTSGATVVLAQSSRNLMEVTGTEANRARTQYGPYTPGSRAYGYSPRLHRRWHWSHRHW
Ga0306919_101465341	3300031879	Soil	VRKTLGIVAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSP
Ga0318522_103023672	3300031894	Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRL
Ga0310912_106580351	3300031941	Soil	MRKTLGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRAQTQYGRYTPGSRAYAYSPRL
Ga0310911_100405775	3300032035	Soil	MRKTVGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLHRRWHWSHRHW
Ga0318558_100946041	3300032044	Soil	VRKTLGIVAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRLQRRWHWSHRHW
Ga0318532_101008611	3300032051	Soil	MRKTVGIAAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAHSPRLQRRWHWSHRHW
Ga0306924_102114011	3300032076	Soil	VRKTLGIVAVAISLTSGATVVLAQSSRNLMEVTGTEANRVQTQYGRYTPGSRAYAYSPRL
Ga0307472_1005690812	3300032205	Hardwood Forest Soil	AISLIGGATVVLAQSSRNLMDVTGTEANRRQTQYGPYTPGARSYAYAPRLHRRWHWSHRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084604

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences