Metagenome / Metatranscriptome Family F084643

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084643
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	77 residues
Representative Sequence	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAIS
Number of Associated Samples	74
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.14 %
% of genes near scaffold ends (potentially truncated)	24.11 %
% of genes from short scaffolds (< 2000 bps)	70.54 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.643 % of family members)
Environment Ontology (ENVO)	Unclassified (57.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.321 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.49% β-sheet: 3.80% Coil/Unstructured: 36.71%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF02776	TPP_enzyme_N	56.25
PF00206	Lyase_1	4.46
PF03949	Malic_M	4.46
PF10415	FumaraseC_C	3.57
PF00939	Na_sulph_symp	0.89
PF00390	malic	0.89
PF13561	adh_short_C2	0.89
PF03449	GreA_GreB_N	0.89
PF01979	Amidohydro_1	0.89
PF11760	CbiG_N	0.89
PF13515	FUSC_2	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0281	Malic enzyme	Energy production and conversion [C]	5.36
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	4.46
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.89
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.89
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	4.46 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10413582	Not Available	549	Open in IMG/M
3300001867\|JGI12627J18819_10497792	Not Available	501	Open in IMG/M
3300003505\|JGIcombinedJ51221_10028856	Not Available	2006	Open in IMG/M
3300003505\|JGIcombinedJ51221_10081864	Not Available	1269	Open in IMG/M
3300005434\|Ga0070709_11333118	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005439\|Ga0070711_101718097	Not Available	550	Open in IMG/M
3300005468\|Ga0070707_100353842	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300005471\|Ga0070698_100011035	All Organisms → cellular organisms → Bacteria	9603	Open in IMG/M
3300005518\|Ga0070699_100118084	Not Available	2331	Open in IMG/M
3300005518\|Ga0070699_100246538	Not Available	1596	Open in IMG/M
3300005602\|Ga0070762_10026729	Not Available	3056	Open in IMG/M
3300005921\|Ga0070766_10128107	Not Available	1532	Open in IMG/M
3300006028\|Ga0070717_10874658	Not Available	818	Open in IMG/M
3300006173\|Ga0070716_100264579	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300006176\|Ga0070765_100006622	All Organisms → cellular organisms → Bacteria	7789	Open in IMG/M
3300006176\|Ga0070765_101888774	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300006804\|Ga0079221_11334285	Not Available	566	Open in IMG/M
3300011120\|Ga0150983_15036914	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300020579\|Ga0210407_10024005	All Organisms → cellular organisms → Bacteria	4535	Open in IMG/M
3300020579\|Ga0210407_10030233	All Organisms → cellular organisms → Bacteria	4025	Open in IMG/M
3300020579\|Ga0210407_10187497	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300020579\|Ga0210407_11451164	Not Available	507	Open in IMG/M
3300020580\|Ga0210403_10044330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3554	Open in IMG/M
3300020580\|Ga0210403_10661560	Not Available	839	Open in IMG/M
3300020580\|Ga0210403_11285298	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300020581\|Ga0210399_10006529	All Organisms → cellular organisms → Bacteria	9104	Open in IMG/M
3300020581\|Ga0210399_10898935	Not Available	718	Open in IMG/M
3300020581\|Ga0210399_11475753	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300020582\|Ga0210395_10064377	All Organisms → cellular organisms → Bacteria	2690	Open in IMG/M
3300020582\|Ga0210395_11389152	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300020583\|Ga0210401_10080853	All Organisms → cellular organisms → Bacteria	3059	Open in IMG/M
3300020583\|Ga0210401_10198204	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300020583\|Ga0210401_10233102	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300020583\|Ga0210401_10495284	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300020583\|Ga0210401_10809574	Not Available	796	Open in IMG/M
3300020583\|Ga0210401_10889735	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300021168\|Ga0210406_10089536	Not Available	2624	Open in IMG/M
3300021170\|Ga0210400_10043286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3497	Open in IMG/M
3300021170\|Ga0210400_10639198	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300021171\|Ga0210405_10406799	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300021171\|Ga0210405_11410152	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300021178\|Ga0210408_10543260	Not Available	922	Open in IMG/M
3300021180\|Ga0210396_10149575	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300021180\|Ga0210396_10455812	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300021181\|Ga0210388_10138159	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300021402\|Ga0210385_10299420	Not Available	1192	Open in IMG/M
3300021403\|Ga0210397_10110424	Not Available	1871	Open in IMG/M
3300021403\|Ga0210397_10297559	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300021404\|Ga0210389_10258974	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300021405\|Ga0210387_10172605	Not Available	1863	Open in IMG/M
3300021406\|Ga0210386_10519168	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300021406\|Ga0210386_10890047	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300021406\|Ga0210386_11576363	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300021407\|Ga0210383_10114324	Not Available	2277	Open in IMG/M
3300021420\|Ga0210394_10000582	All Organisms → cellular organisms → Bacteria	73537	Open in IMG/M
3300021432\|Ga0210384_10043854	All Organisms → cellular organisms → Bacteria	4093	Open in IMG/M
3300021432\|Ga0210384_10818316	Not Available	829	Open in IMG/M
3300021432\|Ga0210384_10841515	Not Available	816	Open in IMG/M
3300021474\|Ga0210390_10367319	Not Available	1217	Open in IMG/M
3300021475\|Ga0210392_11334382	Not Available	536	Open in IMG/M
3300021477\|Ga0210398_10424251	Not Available	1084	Open in IMG/M
3300021477\|Ga0210398_10430835	Not Available	1075	Open in IMG/M
3300021478\|Ga0210402_11501590	Not Available	601	Open in IMG/M
3300021479\|Ga0210410_10328979	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300022504\|Ga0242642_1056411	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300022712\|Ga0242653_1007794	Not Available	1261	Open in IMG/M
3300022724\|Ga0242665_10020682	Not Available	1510	Open in IMG/M
3300025905\|Ga0207685_10648460	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300025915\|Ga0207693_10028196	All Organisms → cellular organisms → Bacteria	4436	Open in IMG/M
3300025922\|Ga0207646_10036725	All Organisms → cellular organisms → Bacteria	4422	Open in IMG/M
3300025928\|Ga0207700_10653199	Not Available	938	Open in IMG/M
3300027047\|Ga0208730_1013720	Not Available	889	Open in IMG/M
3300027061\|Ga0209729_1000003	All Organisms → cellular organisms → Bacteria	23107	Open in IMG/M
3300027065\|Ga0208489_1006074	Not Available	691	Open in IMG/M
3300027069\|Ga0208859_1037950	Not Available	561	Open in IMG/M
3300027070\|Ga0208365_1000454	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3798	Open in IMG/M
3300027071\|Ga0209214_1000005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8404	Open in IMG/M
3300027074\|Ga0208092_107168	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300027090\|Ga0208604_1001282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	2412	Open in IMG/M
3300027095\|Ga0208606_100404	Not Available	1521	Open in IMG/M
3300027104\|Ga0208095_1001899	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300027109\|Ga0208603_1070613	Not Available	519	Open in IMG/M
3300027371\|Ga0209418_1000013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8369	Open in IMG/M
3300027376\|Ga0209004_1000471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5659	Open in IMG/M
3300027502\|Ga0209622_1000081	All Organisms → cellular organisms → Bacteria	10491	Open in IMG/M
3300027548\|Ga0209523_1000005	All Organisms → cellular organisms → Bacteria	25036	Open in IMG/M
3300027855\|Ga0209693_10149016	Not Available	1155	Open in IMG/M
3300027884\|Ga0209275_10018326	All Organisms → cellular organisms → Bacteria	3102	Open in IMG/M
3300027889\|Ga0209380_10005748	All Organisms → cellular organisms → Bacteria	7504	Open in IMG/M
3300028906\|Ga0308309_10003905	All Organisms → cellular organisms → Bacteria	8965	Open in IMG/M
3300028906\|Ga0308309_10648479	Not Available	917	Open in IMG/M
3300028906\|Ga0308309_10975605	Not Available	734	Open in IMG/M
3300029636\|Ga0222749_10286300	Not Available	848	Open in IMG/M
3300031718\|Ga0307474_10649450	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300031740\|Ga0307468_100018206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3020	Open in IMG/M
3300031753\|Ga0307477_10134610	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300031753\|Ga0307477_10268512	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300031753\|Ga0307477_10454587	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300031753\|Ga0307477_11078685	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300031754\|Ga0307475_10193315	Not Available	1625	Open in IMG/M
3300031754\|Ga0307475_10984171	Not Available	663	Open in IMG/M
3300031754\|Ga0307475_11306962	Not Available	561	Open in IMG/M
3300031754\|Ga0307475_11360229	Not Available	548	Open in IMG/M
3300031823\|Ga0307478_10893249	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031962\|Ga0307479_10021111	All Organisms → cellular organisms → Bacteria	6159	Open in IMG/M
3300031962\|Ga0307479_10546193	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300031962\|Ga0307479_10815297	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300031962\|Ga0307479_11470346	Not Available	639	Open in IMG/M
3300031962\|Ga0307479_11724475	Not Available	579	Open in IMG/M
3300032174\|Ga0307470_10652962	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300032180\|Ga0307471_101184982	Not Available	928	Open in IMG/M
3300032205\|Ga0307472_102140378	Not Available	563	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.50%
Loam	Environmental → Terrestrial → Soil → Loam	37.50%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	61.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	26.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	17.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	16.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.71%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027065	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF006 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027074	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF014 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027095	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF020 (SPAdes)	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_104135821	3300001867	Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVQVWTAPSTTAHAVIFGAVG
JGI12627J18819_104977921	3300001867	Forest Soil	MEMYLQYPLEEREQMNADEMNWLLQTIEEPETAKGFVQAQYELGRIPYQLVVDLARQRGWTDYPP
JGIcombinedJ51221_100288561	3300003505	Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTATPTSVEYATAHAVICGAAGAIS*
JGIcombinedJ51221_100818643	3300003505	Forest Soil	MNADEMNWLLQTIEEPDTAKRFVQAQYELGRISYQLVVDLARQRDWTDYPPVRVWTAPPTSVEYATSRTVIFGAAGTIS*
Ga0070709_113331182	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAIS*
Ga0070711_1017180971	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGA
Ga0070707_1003538422	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MYLQYPLEEREQMNTDEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLVRQRGWTDYPPVRVLTAPPTSVEYATAHAVIFGAAGAIS*
Ga0070698_10001103510	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATVQAVIFGAAGAIS*
Ga0070699_1001180842	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNTDEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAIS*
Ga0070699_1002465381	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNADEMNWLLQTIEEPETAKRLVQAQYELGRIPYQLVVDLAQQQGWTDYLRVRVWTAPPTSVEYATA*
Ga0070762_100267292	3300005602	Soil	MNADEMNWLLQTIQEPETAKRFVQAQYELGRIPYQLAVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAIS*
Ga0070766_101281071	3300005921	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWIDYPPVRVSTAPPTSVEYATAHAVIFAAAGAIS*
Ga0070717_108746582	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLAQQRGWTDYPPVRVWTAPSTSAEYATAHAVI
Ga0070716_1002645792	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATAHAVIFGTARAIS*
Ga0070765_1000066229	3300006176	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLIVDLAQRQGWTDYLPVRAWMAPPTSVEYATA*
Ga0070765_1018887741	3300006176	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPLVRVSTAPPTSVEYATAHAVIFAAAGAIS*
Ga0079221_113342851	3300006804	Agricultural Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRTAPSTSAECATAHAVIFGAVGAIS*
Ga0150983_150369141	3300011120	Forest Soil	AMNADEMNWLLQTIEEPDTAKRFVQAQYELGRISYQLVVDLARQRDWTDYPPVRIWTAPPTSGEYATVQAVIFGAAEAIS*
Ga0210407_100240052	3300020579	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLIVDLAQQQGWTDYLPVRVWMAPPTSVEYATA
Ga0210407_100302332	3300020579	Soil	MNADEMNWLLQTIEEPDTAKRFVQAQYELGRISYQLVVDLARQRDWTDYPPVRVWTAPPTSVEYATSRTVIFGAAGTIS
Ga0210407_101874972	3300020579	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRVSYQLIVDLARQRGWTDYPPVRVWTAPATSLEYVTAHAVIFGAQGAIS
Ga0210407_114511641	3300020579	Soil	MEMYLQYPLEEREQMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATVQAVIFGAAGAIS
Ga0210403_100443301	3300020580	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLIVDLAQQQGWTDYLPVRVWMTPPTSVEYATA
Ga0210403_106615602	3300020580	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATVQAVIFGAAGAIS
Ga0210403_112852982	3300020580	Soil	MNADEMNWLLQTIEEPEAAKRFVQAQYELGRVSYQLIVDLARQRGWTDYPPVRVWTAPATSLEYVTAHAVIFGAQGAIS
Ga0210399_100065292	3300020581	Soil	MTADEMNWLLQTIEDPETAKGFVQAQYELGRIPYRLIVDLAQQQGWTDYLPVRVWMAPPTSVECAAA
Ga0210399_108989352	3300020581	Soil	MNADEMNWLLQTIEEPETARRFVQAQYELGRIPYQLVADLARQRGWTDYLAVRVCAAPPTSVECATAYPVILAAEVAIS
Ga0210399_114757531	3300020581	Soil	KRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATVQAVIFGAAAANS
Ga0210395_100643773	3300020582	Soil	MNADEMNWLLQTIEEPETARRFVQAQYELGRIPYQLVADLARQRGWTDYLAIPVSTAPPTSVECAAVYQ
Ga0210395_113891521	3300020582	Soil	MNADEMNWLLQTIEEPETAKRFVQSQYELGRVSYQLIVDLARQRGWTDYPPVRVWTAPATSLEYVTAHAVLFGAQGAIS
Ga0210401_100808535	3300020583	Soil	MNADEMNWLSQTIEEPDTARRFVQAQYALGRIPYQLVVDLARQRGWTDYLPVRVCAAPPTSVEYATAYPVILAAAGGIL
Ga0210401_101982041	3300020583	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAIL
Ga0210401_102331023	3300020583	Soil	MNADEMNWLLQTIEKPETAKRFVQAQYELGRIPYQLVVDLAQQRGWTDYLLVRAWTALPTSVEYATA
Ga0210401_104952842	3300020583	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTATPTSVEYATAHAVICGAVGAIS
Ga0210401_108095742	3300020583	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVPVWTAPSTSAEYATAHAVIFGALGAIS
Ga0210401_108897351	3300020583	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYERGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATVQAVIFGAAGAIS
Ga0210406_100895363	3300021168	Soil	MNADEMNWLLQTIEEPDTAKRFVQAQYELGRISYQLVVDLARQRDWTDYPPLRVWTAPPTSLEYATAHAVIFGAAGTIS
Ga0210400_100432861	3300021170	Soil	MNADEMNWLLQTTEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATVQAVIFGAAGAIS
Ga0210400_106391981	3300021170	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRDWTAPPTSVEYATAHAVIFGAVGAIS
Ga0210405_104067992	3300021171	Soil	MNADEMNWLLQTIEEPDTAKRFVQAQYELGRISYHLVVDLARQRDWTDYPPVRVWTAPRTSLEYATAHAVIFGAAGTIS
Ga0210405_114101522	3300021171	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYHLIVDLARQQGWTDYLPVRVWTAPPISVEYATA
Ga0210408_105432602	3300021178	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATSRTVI
Ga0210396_101495752	3300021180	Soil	MNADEMKWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTATPTSVEYATAHAVICGAAGAIS
Ga0210396_104558122	3300021180	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTTAHAVIFGAVGAIS
Ga0210388_101381593	3300021181	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAI
Ga0210385_102994201	3300021402	Soil	EQMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAIS
Ga0210397_101104242	3300021403	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTALSTSAEYATAHAVIFGAVGAIS
Ga0210397_102975592	3300021403	Soil	MNADEMNWLLQTIEEPEAAKRFVQAQYELGRVSYQLIVDLARQRGWTEYPPVRVWTAPATSLEYVTAHAVIFGAQGAIS
Ga0210389_102589742	3300021404	Soil	MNADEMNWLLQTIEEPDTAKRFVQAQYGLGRISYQLVVDLARQRDWTDYPPVRVWTAPPTSVEYATSRTVIFGAAGTIS
Ga0210387_101726052	3300021405	Soil	MNADEMNWLLQTIDEPETAKRFVQAQYELGRIPYQLIVDLAQQQGWTDYLPVRVWMTPPTSVEYATA
Ga0210386_105191682	3300021406	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTATPTSVEYATAHAVICGAAGAIS
Ga0210386_108900471	3300021406	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTTAHAVIFGVVGAIS
Ga0210386_115763631	3300021406	Soil	SMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAIS
Ga0210383_101143244	3300021407	Soil	MNADEMNWLMQTIEEPETAKRFVQAQYELGRISYQLVVDLARQRDWTDYPPVRVWTALPTSVECATVHAVIFGAAGAIS
Ga0210394_1000058248	3300021420	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDCPPVRVWTAPSTSAEYATAHAVIFGAVGAIS
Ga0210384_100438545	3300021432	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLIVNLAQQRGWTDYLPVRVWMTPPTSVEYATA
Ga0210384_108183161	3300021432	Soil	MNADEMNWLLQTIEEPETAKRFVHAQYGLGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATVQAV
Ga0210384_108415152	3300021432	Soil	MEMYLQYRVKEHRKMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYHLIVDLARQQGWTDYLPVRVWTAPPISVEYATA
Ga0210390_103673191	3300021474	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVQVWTAPSTTAHAVIFGAVGAIS
Ga0210392_113343821	3300021475	Soil	LQYPLEEREQMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPSSV
Ga0210398_104242512	3300021477	Soil	MNADEMNWLLQTIEKPETAKRFVQAQYELGRVPYQLVVDLAQQRGWTDYLLVRAWTALPTSVEYATA
Ga0210398_104308352	3300021477	Soil	MNADEMNWLLQTIQEPETAKRFVQAQYELGRIPYQLVVDLARQRGRTDYPPVRVWTAPSTTAH
Ga0210402_115015901	3300021478	Soil	LQYPLEEREQMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQLGWTDYPPVRVWTAPPTSVEYATVQAVIFGAAGAIS
Ga0210410_103289792	3300021479	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGPVGAIS
Ga0242642_10564112	3300022504	Soil	LLQTIEDPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATVQAVIFGAAGANS
Ga0242653_10077941	3300022712	Soil	PETARRFVQAQYKLGRIPYQLLADLARQRGWTDHLPVWPAPPTSVEYATVQAVIFGAAGAIS
Ga0242665_100206822	3300022724	Soil	NADEMNWLLQTIEEPETAKRFVQAQYGLGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATSRTVIFGAAGAIS
Ga0207685_106484602	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVADLARQRGWTDYPPVRIWTAPPTSGEYATVQAVIFGAAGAIS
Ga0207693_100281964	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNADEMNWLLQTIEEPDTAKRFVQAQYELGRISYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAIS
Ga0207646_100367251	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLVRQRGWTDYPPVRVLTAPPTSVEYATAHAVIFGAAGAIS
Ga0207700_106531991	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	QMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSLEYATAHAVIFGAAGAIS
Ga0208730_10137201	3300027047	Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLIVDLAQQQGWTDYLPVRVWMAPPTSVEYATAHAVIFAAAGAIS
Ga0209729_10000031	3300027061	Forest Soil	MNADEMNWLLQTIEEPETAKGFVQAQYELGRIPYQLVVDLARQRGWTDYPPVQVWTAPSTTAHAVIFGAVGAIS
Ga0208489_10060741	3300027065	Forest Soil	MNADEMNWLLQTIEEPDTAKRFVQAQYELGRISYQLVVDLARQRDWTDYPPVRVWTAPPTSVEYATSRTVIFGA
Ga0208859_10379501	3300027069	Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVNLAGQRGWTDYPPVRVWTAPATSLEYATAHAVIFDAPGAIS
Ga0208365_10004543	3300027070	Forest Soil	MNADEMNWLLQTIEEPDTAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTATPTSVEYATAHAVICGAAGAIS
Ga0209214_10000054	3300027071	Forest Soil	MNADEMNWLLQTIEEPETAKGFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSPEYATAHAVLLVAVGAIS
Ga0208092_1071682	3300027074	Forest Soil	MNADEMNWLLQTIEEPETTKRFVQAQYGLGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSLEYATAHAVIFGAAGAIS
Ga0208604_10012821	3300027090	Forest Soil	EEPETAKRFVQAQYELGRIPYQLVVDLARQRDWTDYPPVRVWTAPPTSVEYATSRTVIFGAAGTIS
Ga0208606_1004042	3300027095	Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVNLAWQRGWTDYPPVRVWTAPSTTAHAVIFGAVGAIS
Ga0208095_10018992	3300027104	Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVRTAPSASAEYATAHAVIFGAVGAIS
Ga0208603_10706131	3300027109	Forest Soil	MNADEMNWLLQTIEEPETARRFVQAQYELGRIPYQLVADLARQRGWTDYLAVRVCAAPPTSVECAT
Ga0209418_10000136	3300027371	Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPHQLVVDLARQRGWTDYPPVRVWTATPTSVEYATAHAVICGAAGAIS
Ga0209004_10004714	3300027376	Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATAPAVIFGAAEAIS
Ga0209622_10000813	3300027502	Forest Soil	MNADEMNWLLQTIEEPETAKRFVQEQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYTTPHAVIFGAVGPIS
Ga0209523_10000055	3300027548	Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATAHALIFGAAEAIS
Ga0209693_101490161	3300027855	Soil	MNADEMNWLLQTIQEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAIS
Ga0209275_100183262	3300027884	Soil	MNADEMNWLLQTIQEPETAKRFVQAQYELGRIPYQLAVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAIS
Ga0209380_100057484	3300027889	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPLVRVSTAPPTSVEYATAHAVIFAAAGAIS
Ga0308309_100039058	3300028906	Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLIVDLAQRQGWTDYLPVRAWMAPPTSVEYATA
Ga0308309_106484791	3300028906	Soil	MNADEMNWLLQTIQEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAI
Ga0308309_109756052	3300028906	Soil	EMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVNLAGQRGWTDYPPVRVWTAPATSLEYATAHAVIFDAPGAIS
Ga0222749_102863001	3300029636	Soil	MNADEMNWLLQTIEEPETAKRFVQSQYELGRVSYQLIVDLARQRGWTDYPPVRVWTAPATSLEYATAHAVLFGAAGAIS
Ga0307474_106494502	3300031718	Hardwood Forest Soil	VQLDLHERMEMYLQYPLEEREQMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVQVWTAPSTTAHAVIFGAVGAIS
Ga0307468_1000182063	3300031740	Hardwood Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVNLAWQRGWTDYPPVRVWTAPSTSAEYATAHPVSFGAVGAIS
Ga0307477_101346102	3300031753	Hardwood Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQCGWTDYPPVRVWTATPTSVEYATAHGVIFGAVGAIS
Ga0307477_102685122	3300031753	Hardwood Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVNLAWQRGWTDYPPVRVWTAPSTSAEYATAHAVSFGAVGAIS
Ga0307477_104545871	3300031753	Hardwood Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRLWTAPPTSVEYTTPHVVIFGAVGAIS
Ga0307477_110786851	3300031753	Hardwood Forest Soil	QLDLNEGMEMYLQYPLEEREQMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATVQAVIFGAAGAIS
Ga0307475_101933152	3300031754	Hardwood Forest Soil	MNADEMNWLLQTSEEPETAKRFVQAQYALGRISYQLVVDLARQRDWTDYPPVRVWTAPPTSVEYATAHAVIFGAAGAIS
Ga0307475_109841712	3300031754	Hardwood Forest Soil	LQYPLEEREQMNADEMNWLLQTIEEPETAKGFVQAQYELGRIPYQLVVDLARQRGWTDYPPVQVWTAPSTTAHAVIFGAVGAIS
Ga0307475_113069622	3300031754	Hardwood Forest Soil	LQYPLEEREQMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTTAHAV
Ga0307475_113602291	3300031754	Hardwood Forest Soil	LQYPLGEHVQMNADEMNWLLQTIEEPETAKGFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSVEYATVQAVIFG
Ga0307478_108932492	3300031823	Hardwood Forest Soil	MYLQYPLEEREQMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVQVWTAPSTTAHAVIFGAVGAIS
Ga0307479_100211112	3300031962	Hardwood Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYHLIVDLARQQGWTDYLPVRVLTAPLTSVEYATA
Ga0307479_105461932	3300031962	Hardwood Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVELALQCGWTDYPPVRVWTATPTSVEYATAHGVIFGAVGAIS
Ga0307479_108152972	3300031962	Hardwood Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPQVRVWTAPPPSVEYATAHAVIFGAAEAIS
Ga0307479_114703461	3300031962	Hardwood Forest Soil	MNADEMNWLLQTIEEPATAKRFVQAQYELGRIPYQLVVDLAQQQGWTDYLLVPASTAPPTSVEYATA
Ga0307479_117244751	3300031962	Hardwood Forest Soil	MEMYLQYPLEEREQMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAIS
Ga0307470_106529621	3300032174	Hardwood Forest Soil	MNADEMNWLLQTIEEPETAKRFVHAQYERGRIPYQLVVDLARQRGWTDYPPVRVWTAPSTSAEYATAHAVIFGAVGAIS
Ga0307471_1011849822	3300032180	Hardwood Forest Soil	MNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWIAPPTSLEYATAHAVIFGAPGAIS
Ga0307472_1021403781	3300032205	Hardwood Forest Soil	MYLQYPLEEREQMNADEMNWLLQTIEEPETAKRFVQAQYELGRIPYQLVVDLARQRGWTDYPPVRVWTAPPTSLEYATAHAVIFGAAGAIS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084643

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences