Metagenome Family F084655

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084655
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	70 residues
Representative Sequence	MVKAQDTASIRTLRRALATVGSEERLAAELNVSVLDLSSWLSGERIAPSEVFIKALDIVARTRRGAG
Number of Associated Samples	85
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.04 %
% of genes near scaffold ends (potentially truncated)	21.43 %
% of genes from short scaffolds (< 2000 bps)	83.04 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (30.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.464 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.84% β-sheet: 0.00% Coil/Unstructured: 43.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.35.1.6: YdiL-like	d2ox6a1	2ox6	0.75779
a.35.1.3: SinR domain-like	d2xi8a_	2xi8	0.7231
a.35.1.0: automated matches	d3f52a_	3f52	0.70745
a.35.1.7: CUT domain	d1wh8a1	1wh8	0.70526
a.35.1.7: CUT domain	d2d5va1	2d5v	0.7045

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00005	ABC_tran	29.46
PF04909	Amidohydro_2	21.43
PF03401	TctC	13.39
PF12399	BCA_ABC_TP_C	2.68
PF01557	FAA_hydrolase	1.79
PF07883	Cupin_2	0.89
PF13458	Peripla_BP_6	0.89
PF02653	BPD_transp_2	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	13.39

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.64 %
Unclassified	root	N/A	7.14 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.57 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	35.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.07 %
Unclassified	root	N/A	7.14 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.57 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	27.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.04 %
Unclassified	root	N/A	7.14 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6.25 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3.57 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	27.68 %
Unclassified	root	N/A	7.14 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	6.25 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.46 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	3.57 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	27.68 %
Unclassified	root	N/A	7.14 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	6.25 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.57 %
Salipiger	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger	0.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	27.68 %
Unclassified	root	N/A	7.14 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	6.25 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.57 %
Salipiger bermudensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger bermudensis	0.89 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	27.68 %
Unclassified	root	N/A	7.14 %
Variovorax sp. RA8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. RA8	6.25 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.57 %
Afipia sp. 1NLS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. 1NLS2	0.89 %
Salipiger bermudensis HTCC2601	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger bermudensis → Salipiger bermudensis HTCC2601	0.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0747113	All Organisms → cellular organisms → Bacteria → Proteobacteria	37915	Open in IMG/M
3300001305\|C688J14111_10017946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. 1NLS2	2067	Open in IMG/M
3300001686\|C688J18823_10005795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7890	Open in IMG/M
3300001686\|C688J18823_10033171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3537	Open in IMG/M
3300001686\|C688J18823_10501674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	778	Open in IMG/M
3300002568\|C688J35102_119517128	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300002568\|C688J35102_119772376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger bermudensis → Salipiger bermudensis HTCC2601	771	Open in IMG/M
3300002568\|C688J35102_120681244	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300003267\|soilL1_10066715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2148	Open in IMG/M
3300003319\|soilL2_10168362	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300003321\|soilH1_10029622	All Organisms → cellular organisms → Bacteria → Proteobacteria	1596	Open in IMG/M
3300003321\|soilH1_10071946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1627	Open in IMG/M
3300003321\|soilH1_10233533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1714	Open in IMG/M
3300003324\|soilH2_10173622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1284	Open in IMG/M
3300003465\|P52013CM_1012157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3771	Open in IMG/M
3300003465\|P52013CM_1025765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1781	Open in IMG/M
3300004024\|Ga0055436_10091481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. RA8	880	Open in IMG/M
3300004114\|Ga0062593_100333323	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300004153\|Ga0063455_101642344	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300004156\|Ga0062589_102809563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	508	Open in IMG/M
3300004157\|Ga0062590_100088803	All Organisms → cellular organisms → Bacteria → Proteobacteria	1908	Open in IMG/M
3300004157\|Ga0062590_100099759	All Organisms → cellular organisms → Bacteria → Proteobacteria	1834	Open in IMG/M
3300004463\|Ga0063356_101210279	Not Available	1098	Open in IMG/M
3300004463\|Ga0063356_103255876	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	700	Open in IMG/M
3300005171\|Ga0066677_10053471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2026	Open in IMG/M
3300005175\|Ga0066673_10670444	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005176\|Ga0066679_10076054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1996	Open in IMG/M
3300005179\|Ga0066684_10270043	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300005179\|Ga0066684_10868733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	591	Open in IMG/M
3300005330\|Ga0070690_100417990	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300005336\|Ga0070680_100030362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4342	Open in IMG/M
3300005340\|Ga0070689_101986098	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300005365\|Ga0070688_101740567	Not Available	511	Open in IMG/M
3300005439\|Ga0070711_101975100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	513	Open in IMG/M
3300005440\|Ga0070705_100013540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4175	Open in IMG/M
3300005440\|Ga0070705_100150537	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300005440\|Ga0070705_100529363	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300005441\|Ga0070700_100887855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	725	Open in IMG/M
3300005454\|Ga0066687_10177186	Not Available	1148	Open in IMG/M
3300005459\|Ga0068867_101675286	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300005467\|Ga0070706_100599100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. RA8	1024	Open in IMG/M
3300005518\|Ga0070699_100138483	All Organisms → cellular organisms → Bacteria → Proteobacteria	2148	Open in IMG/M
3300005536\|Ga0070697_101860255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	539	Open in IMG/M
3300005536\|Ga0070697_101997765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	519	Open in IMG/M
3300005540\|Ga0066697_10086221	All Organisms → cellular organisms → Bacteria → Proteobacteria	1817	Open in IMG/M
3300005544\|Ga0070686_101145574	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300005555\|Ga0066692_10617909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	679	Open in IMG/M
3300005558\|Ga0066698_10403204	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005575\|Ga0066702_10903843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	527	Open in IMG/M
3300005985\|Ga0081539_10021821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4262	Open in IMG/M
3300006032\|Ga0066696_10037128	All Organisms → cellular organisms → Bacteria → Proteobacteria	2654	Open in IMG/M
3300006032\|Ga0066696_10120214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1606	Open in IMG/M
3300006173\|Ga0070716_100072911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2024	Open in IMG/M
3300006175\|Ga0070712_101604320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	569	Open in IMG/M
3300006755\|Ga0079222_10619661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	832	Open in IMG/M
3300006755\|Ga0079222_12147756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	554	Open in IMG/M
3300006794\|Ga0066658_10610675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	595	Open in IMG/M
3300006804\|Ga0079221_10869215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	657	Open in IMG/M
3300006871\|Ga0075434_101401153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	709	Open in IMG/M
3300006871\|Ga0075434_102562550	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511	Open in IMG/M
3300006904\|Ga0075424_100168916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2320	Open in IMG/M
3300006904\|Ga0075424_100603148	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300006954\|Ga0079219_11868190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	565	Open in IMG/M
3300006954\|Ga0079219_12130630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. RA8	538	Open in IMG/M
3300009094\|Ga0111539_10967040	Not Available	990	Open in IMG/M
3300009137\|Ga0066709_100528022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. RA8	1667	Open in IMG/M
3300009147\|Ga0114129_10475822	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300010038\|Ga0126315_10162895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1326	Open in IMG/M
3300010321\|Ga0134067_10402098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	549	Open in IMG/M
3300010335\|Ga0134063_10212596	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300010371\|Ga0134125_12652903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	545	Open in IMG/M
3300010399\|Ga0134127_10097008	All Organisms → cellular organisms → Bacteria	2572	Open in IMG/M
3300010401\|Ga0134121_10483334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1137	Open in IMG/M
3300010401\|Ga0134121_11202400	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	758	Open in IMG/M
3300010401\|Ga0134121_11238669	Not Available	748	Open in IMG/M
3300010401\|Ga0134121_12512244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	557	Open in IMG/M
3300012212\|Ga0150985_118089187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1535	Open in IMG/M
3300012212\|Ga0150985_122293221	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300012469\|Ga0150984_116914642	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300012469\|Ga0150984_120950543	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300012469\|Ga0150984_122260056	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300014166\|Ga0134079_10554867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	564	Open in IMG/M
3300014487\|Ga0182000_10469697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	577	Open in IMG/M
3300018433\|Ga0066667_10067155	All Organisms → cellular organisms → Bacteria → Proteobacteria	2249	Open in IMG/M
3300018468\|Ga0066662_11451357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	712	Open in IMG/M
3300020146\|Ga0196977_1054561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	950	Open in IMG/M
3300020202\|Ga0196964_10131443	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300020202\|Ga0196964_10138320	All Organisms → cellular organisms → Bacteria → Proteobacteria	1097	Open in IMG/M
3300025910\|Ga0207684_10487503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. RA8	1057	Open in IMG/M
3300025912\|Ga0207707_10005025	All Organisms → cellular organisms → Bacteria → Proteobacteria	11616	Open in IMG/M
3300025917\|Ga0207660_10382839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1131	Open in IMG/M
3300025922\|Ga0207646_11354697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. RA8	620	Open in IMG/M
3300025927\|Ga0207687_10830398	Not Available	789	Open in IMG/M
3300025930\|Ga0207701_11430075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	563	Open in IMG/M
3300025931\|Ga0207644_10829194	Not Available	774	Open in IMG/M
3300026301\|Ga0209238_1095438	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300026309\|Ga0209055_1004014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8829	Open in IMG/M
3300026312\|Ga0209153_1037099	All Organisms → cellular organisms → Bacteria → Proteobacteria	1689	Open in IMG/M
3300026315\|Ga0209686_1139844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. RA8	763	Open in IMG/M
3300026325\|Ga0209152_10210663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	729	Open in IMG/M
3300026342\|Ga0209057_1164405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	662	Open in IMG/M
3300026550\|Ga0209474_10040337	All Organisms → cellular organisms → Bacteria → Proteobacteria	3416	Open in IMG/M
3300031538\|Ga0310888_10179332	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300031720\|Ga0307469_10603241	All Organisms → cellular organisms → Bacteria → Proteobacteria	981	Open in IMG/M
3300031854\|Ga0310904_11302248	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300031944\|Ga0310884_10562807	Not Available	677	Open in IMG/M
3300031944\|Ga0310884_10981201	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300032002\|Ga0307416_101884935	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300032180\|Ga0307471_100711639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1169	Open in IMG/M
3300032205\|Ga0307472_102604697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	515	Open in IMG/M
3300033412\|Ga0310810_10256522	All Organisms → cellular organisms → Bacteria → Proteobacteria	1918	Open in IMG/M
3300033412\|Ga0310810_10802245	All Organisms → cellular organisms → Bacteria → Proteobacteria	850	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.04%
Host-Associated	Host-Associated	16.07%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.14%
Plants	Host-Associated → Plants	16.07%
Aquatic	Environmental → Aquatic	0.89%
Solid Waste	Engineered → Solid Waste	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.36%
Marine	Environmental → Aquatic → Marine	0.89%
Grass	Engineered → Solid Waste → Grass	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.79%
Loam	Environmental → Terrestrial → Soil → Loam	27.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.57%
Sand	Environmental → Terrestrial → Soil → Sand	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Composting	Engineered → Solid Waste → Grass → Composting	0.89%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	9.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.14%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.68%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	2.68%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.89%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	9.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.36%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	5.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.57%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	1.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.79%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_074711336	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MAKDTATIRTLRRALATIGSEERLAAALECSPLELVRWLSGEKPAPGEIFIAALDIVARGGLRSHGR*
C688J14111_100179464	3300001305	Soil	RTLRRALATVGSEERLAAALEVSLLDLSSWLSGERVAPSPVFIKALDIVAKTRRGAA*
C688J18823_1000579510	3300001686	Soil	MAKDTATIRTLRRALATLGSEERLAAALNCSPLELVRWISGEKPAPSEIFIAALDIVAGLGHAAAPARARRA*
C688J18823_100331713	3300001686	Soil	MTKAQDNASIRTLRRALATVGSEERLAAALEVSLLDLSSWLSGERVAPSPVFIKALDIVAKTRRGAA*
C688J18823_105016742	3300001686	Soil	GAQLYIIVGSFFGISMNRNCYFGRQGDMRRTPDNASIRTLRRALATIGSEERLAAALDVSVLDLSSWLSGERVAPGEVFMKALDIVARTHRGAA*
C688J35102_1195171283	3300002568	Soil	MAKDTATIRTLRRALATLGSEERLAAALNCSPWELVRWISGETPAPGEIFIAALDIVASLGHAAREARARRA*
C688J35102_1197723761	3300002568	Soil	RVDTNCFFGRQEKMTKAQDNASIRTLRRALATVGSEERLAAALEVSLLDLSSWLSGERVAPSPVFIKALDIVAKTRRGAA*
C688J35102_1206812442	3300002568	Soil	MKSKDTASIRTLRRALATLGSEERLAAELQVSVVDVASWLSGEQVAPSEIFIKALDIVARTHRGAA*
soilL1_100667153	3300003267	Sugarcane Root And Bulk Soil	MAKDTATMRTLRRALATVGSEERLAAALNCSPLELVRWMSGEKPAPGEIFIAALDIVASLGHAAGQARARRA*
soilL2_101683622	3300003319	Sugarcane Root And Bulk Soil	MKSTDTASIRTLRRALATLGSEERLAAELEVSVIDVASWLAGERIAPREVFMKALDIVARTRPGAG*
soilH1_100296222	3300003321	Sugarcane Root And Bulk Soil	MKSKDTASIRTLRRALATLGSEERLAAELQVSVLDVSSWLSGERVAPSEVFIKALDIVARTRPGVA*
soilH1_100719462	3300003321	Sugarcane Root And Bulk Soil	MKKTQDTASVRTLRRALATLGSEERLAAELQVSVVDVASWLSGERVAPSEVFIKALDIVARTRRGAG*
soilH1_102335332	3300003321	Sugarcane Root And Bulk Soil	MKSTDTASIRTLRRALATLGSEERLAAELQVSVVDVASWLSGERIAPSEVFIKALDIVARTRRGAA*
soilH2_101736222	3300003324	Sugarcane Root And Bulk Soil	VDTNCFWGRQEEMKKTQDTASVRTLRRALATLGSEERLAAELQVSVVDVASWLSGERVAPSEVFIKALDIVARTRRGAG*
P52013CM_10121573	3300003465	Ore Pile And Mine Drainage Contaminated Soil	MIKKQDTASIRTLRRALATIGSEERLAAELNVSLVDLASWLSGERIAPSEVFIKALDIVARTRRGAA*
P52013CM_10257652	3300003465	Ore Pile And Mine Drainage Contaminated Soil	MARTQDTASIRTLRRALATIGSEERLAAELNVSLVDLASWLAGERIAPSEVFIKALDIVARTRRGAA*
Ga0055436_100914811	3300004024	Natural And Restored Wetlands	IRVDTNCVFGRQEEMRKTQDTASIRTLRRALATLGSEERLAAELHVSVVELSSWLSGERVAPGEVFIRALDIVARTRRGAG*
Ga0062593_1003333232	3300004114	Soil	MLKMTDTASIRTLRRALATLGSEERLAAELGVSPVDLAAWLAGERVAPGEVFIAALDIVARKPRGAG*
Ga0063455_1016423443	3300004153	Soil	TMAKDTATIRTLRRALATLGSEERLAAALNCSPWELVRWISGETPAPGEIFIAALDIVASLGHAAREARARRA*
Ga0062589_1028095632	3300004156	Soil	MNCFLGRQEDMIRTQDTASVRTLRRALATLGSEERLAAELQVSLVELSSWLSGERIAPSEVFIKALDIVARTRPGAG*
Ga0062590_1000888033	3300004157	Soil	LGRQEDMIRTQDTASVRTLRRALATLGSEERLAAELQVSLVELSSWLSGERIAPSEVFIKALDIVARTRRGAG*
Ga0062590_1000997593	3300004157	Soil	MKSTDTASVRTLRRALAMLGSEERLAAELQVSVIDVASWLSGERIAPGEVFIKALDIVARTRRGAA*
Ga0063356_1012102792	3300004463	Arabidopsis Thaliana Rhizosphere	MVKAQETASIRTLRRALATVGSEEGLAAELQVSVVDLSSWLSGERMAPSEVFMKALDIVARTRRGAG*
Ga0063356_1032558762	3300004463	Arabidopsis Thaliana Rhizosphere	MVKAQDTASIRTLRRALATVGSEERLAAELNVSVLDLSSWLSGERIAPSEVFIKALDIVARTRRGAG*
Ga0066677_100534711	3300005171	Soil	MGKDTATTRTLRRALATIGSEEHLAAALNCSPLDLACWLSGEKAAPGEVFIAALDIVAGVGHRHRRRR*
Ga0066673_106704443	3300005175	Soil	MGKDTATIRTLRRALATIGSEERLAAALNCSPLELVRWLSGEKPAPSEVFIAALDIVASLGQACSQPRARRA*
Ga0066679_100760542	3300005176	Soil	MGEDTATTRTLRRALATIGSEEHLAAALNCSPLDLACWLSGEKAAPGEVFIAALDIVAGVGHRHRRRR*
Ga0066684_102700432	3300005179	Soil	MGKDTATTRTLRRALATIGSEEHLAAALNCSPLDLARWLSGEKAAPGEVFIAALDIVAGVGHRHRRRR*
Ga0066684_108687332	3300005179	Soil	MGKDTATTRTLRRALATIGSEERLAAALNCSPLELVRWLSGEKPAPSEVFIAALDIVASMGSGPRARRA*
Ga0070690_1004179901	3300005330	Switchgrass Rhizosphere	MNCFLGRQEDMIRTQDTASLRTLRRALATLGSEERLAAELQVSLVELSSWLSGERIAPNEVFIKALDIVARTRRGAG*
Ga0070680_1000303624	3300005336	Corn Rhizosphere	MKSKDTASIRTLRRALATLGSEERLAAELQVSVLDVSSWLSGERVAPSEVFIKALDIVARTRPGSA*
Ga0070689_1019860982	3300005340	Switchgrass Rhizosphere	ICVSSNCFFGRQAEMKSTDTASVRTLRRALAMLGSEERLAAELQVSVIDVASWLSGERIAPGEVFIKALDIVARTRRGAA*
Ga0070688_1017405672	3300005365	Switchgrass Rhizosphere	MNCFLGRQEDMIRTQDTASVRTLRRALATLGSEERLAAELQVSLVELSSWLSGERIAPSEVFIKALDIVARTRRGAG*
Ga0070711_1019751002	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	CQRDLSPRVISGVGKDTATIRTLRRALATIGSEERLAAALNCSPLDLMRWLTGEKPAPSDVFIAALDIVANMGQARQPRARRA*
Ga0070705_1000135404	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MGKDTATIRTLRRALATIGSEERLAAALDCSPLELVRWLSGEQPAPGEIFIAALDIVARGGLRHHGR*
Ga0070705_1001505372	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLRRALATLGSEERLAAELNCSLLDLVEWLSGEKPAPDSAFIAALDIVAGSPKRRQGAA*
Ga0070705_1005293632	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VGKDTATIRTLRRALATIGSEERLAAALNCSPLDLMRWLTGEKAAPGEVFIAALDIVAGAGLRRHHGRR*
Ga0070700_1008878552	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKSAKAPDTASIRTLRRALATLGSEERLAAELGVPLTDLAAWLAGERIAPGEVFIAALDIVARKPRGAG*
Ga0066687_101771863	3300005454	Soil	ATTRTLRRALATIGSEERLAAALNCSPLELVRWLSGEKPAPSEVFIAALDIVASMGSGPRARRA*
Ga0068867_1016752861	3300005459	Miscanthus Rhizosphere	MKSAKAPDTASIRTLRRALATLGSEERLAAELGVPLTDLAAWLAGERIAPGEVFIAALDIVARKPRGAA*
Ga0070706_1005991002	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	TIRTLRRALATIGSEERLAAALDCSPLELVRWLSGEQPAPGEIFIAALDIVARGGLRHHGR*
Ga0070699_1001384832	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGKDTASIRTLRRALATLGSEEHLAAELNVSPLSLMSWLAGEKPAPSEVFIAALDIVASGRTRRHGSR*
Ga0070697_1018602552	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGKDTATIRTLRRALATIGSEERLAAALNCSPLDLMRWLTGEKPAPSDVFIAALDIVANMGQARQPRARRA*
Ga0070697_1019977652	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGKDTASIRTLRRALATLGSEERLAAELDVSPLHLVSWLAGEKPAPSEVFIAALDIVASGRTRRHGSR*
Ga0066697_100862212	3300005540	Soil	MGKDTATTRTLRRALATIGSEEHLAAALNCSPLDLACWLSGEKPAPGEVFIAALDIVAGVGHRHRRRR*
Ga0070686_1011455742	3300005544	Switchgrass Rhizosphere	MKSTDTASVRTLRRALAMLGSEERLAAELQVSVIDVASWLSGERIAPGEVFIKALDIVARTRRGAG*
Ga0066692_106179092	3300005555	Soil	MGKETATIRTLRRALATIGSEEHLAAALECSPLELVRWLSGERPAPGEVFIAALDIVARGGLRHHGS*
Ga0066698_104032042	3300005558	Soil	MGKDTATTRTLRRALATIGNEEHLAAALNCSPLDLARWRSGEKAAPGEVFIAALDIVAGVGHRHRRRR*
Ga0066702_109038432	3300005575	Soil	MAKDTATIRTLRRALATLGSEERLAAALNCSPLELVRWLSGETAAPGEIFIAALDIVASLGHAAAPARARRA*
Ga0081539_100218212	3300005985	Tabebuia Heterophylla Rhizosphere	MGKDTATIRTLRRALATIGSEERLAAALNCSPLELVRWLSGERPAPSEVFMAALDIVASMGQACAQPRERRA*
Ga0066696_100371285	3300006032	Soil	MGKDTATTRTLRRALATIGSEERLAAALNCSPLELVRWLSGEKPAPNEVFIAALDIVASMGSGPRARRA*
Ga0066696_101202142	3300006032	Soil	MGKDTASIRTLRRALATLGSEEGLAAELDVSPLQLVSWLAGEKAAPSEVFIAALDIVASGRTQRQRSR*
Ga0070716_1000729113	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VGKDTATIRTLRRALATIGSEERLAAALNCSPLDLMRWLTGEKPAPSDVFIAALDIVANMGQARQARARRA*
Ga0070712_1016043202	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VGQDTATIRTLRRALATIGSEERLAAALNCSPLDLMRWLTGEKPAPSDVFIAALDI
Ga0079222_106196612	3300006755	Agricultural Soil	VGKDTATIRTLRRALATIGSEERLAAALNCSPLELVRWLSGEKPAPGEIFIAALDIVAGAGLRRHRGRR*
Ga0079222_121477562	3300006755	Agricultural Soil	MKSTDTASIRTLRRALATLGSEERLAAELQVSVIDVASWLSGERIAPSEVFIKALDIVARTRPGAA*
Ga0066658_106106751	3300006794	Soil	DTATARTLRRALATLGSEERLAAALNCSPLELVRWLSGEKPAPSEVFIAALDIVASMGSGPRARRA*
Ga0079221_108692152	3300006804	Agricultural Soil	MRKDTASIRTLRRALATIGSEERLAAALACSPLELVRWLSGEQPAPGEVFIAALDTVARGGLRHQGG*
Ga0075434_1014011532	3300006871	Populus Rhizosphere	MTRRQDTASIRTLRRALATIGSEEHLAAALECSPLELVRWLSGEKPAPGEVFIAALDIVARGGLRHHGS*
Ga0075434_1025625501	3300006871	Populus Rhizosphere	YRLSMGKDTASIRTLRRALATLGSEERLAEALGCSLFDLVDWLSGAAPAPHAAFIAALDIVAGMGYVTKTRRGAG*
Ga0075424_1001689163	3300006904	Populus Rhizosphere	MGKDTATIRTLRRALATIGSEERLAAALNCSPLDLMRWLTDEKAAPGEVFIAALDIVAGAGLRRHHGRR*
Ga0075424_1006031482	3300006904	Populus Rhizosphere	MGKETATIRTLRRALATIGSEEHLAAALECSPLELVRWLSGEKPAPGEVFIAALDIVARGGLRHHGS*
Ga0079219_118681902	3300006954	Agricultural Soil	MAKDTATIRTLRRALATVGSEERLAAALNCSPLELVRWISGEKPAPGEIFIAALDIVASLGHAAGQARVRRA*
Ga0079219_121306301	3300006954	Agricultural Soil	GMRKDTASIRTLRRALATIGSEERLAAALACSPLELVRWLSGEQPAPGEVFIAALDIVARGGLRHQGG*
Ga0111539_109670402	3300009094	Populus Rhizosphere	MDCFLGRQEDMIRTQDTASLRTLRRALATVGSEERLAAELQVSLVELSSWLSGERIAPSEVFIKALDIVARTRRGAA*
Ga0066709_1005280223	3300009137	Grasslands Soil	MGKDTATTRTLRRALATIGNEEHLAAALNCSPLDLACWLSGEKPAPGEVFIAALDIVAGVGHRRRRRR*
Ga0114129_104758223	3300009147	Populus Rhizosphere	MGKDTASIRTLRRALAAIGSEERLAAELNCSLRDLVSWLSGEKPAPSPAFIAALDIVAGAPRKRRGAA*
Ga0126315_101628953	3300010038	Serpentine Soil	MNCFLGRQEDMIRTQDTASIRTLRRALATLGSEERLAAELQVSLVELSSWLSGERVAPSEVFIKALDIVARTPRGAA*
Ga0134067_104020982	3300010321	Grasslands Soil	MGKDTATTRTLRRALATIGNEEHLAAALNCSPLDLACWLSGEKAAPGEVFIAALDIVAGVGHRHRRRR*
Ga0134063_102125961	3300010335	Grasslands Soil	NIMQKETASIRTLRRALETVGSEERLAAALNVAPLDLVRWLSGESPPPDGVFMAALDIVAGTRKRRHR*
Ga0134125_126529032	3300010371	Terrestrial Soil	MGQDTATIRTLRRALATIGSEERLAAALHCSPLELVRWLSGEKPAPGEIFIAALDIVARGGLRYHGR*
Ga0134127_100970083	3300010399	Terrestrial Soil	MLKMTDTASIRTLRRALATLGSEERLAAELGVSLVDLAAWLAGERVAPGEVFIAALDIVARKPRGAG*
Ga0134121_104833342	3300010401	Terrestrial Soil	MESVKASDTASIRTLRRALATLGSEERLAAELQVSVLDVSSWLSGERIAPGEVFIAALDIVARKPRGAG*
Ga0134121_112024002	3300010401	Terrestrial Soil	MAKDTASIRTLRRALATVGSEERLAAELKVSPLDLVRWISGEKPAPPEVFIAALDIVATSWPRTRPGAA*
Ga0134121_112386691	3300010401	Terrestrial Soil	VRTLRRALAMLGSEERLAAELQVSVIAVASWHTGERIAPGEVFIKALDIVARTRRGAA*
Ga0134121_125122441	3300010401	Terrestrial Soil	MGKDTATIRTLRRALATIGSEERLAAALHCSPLELVRWLSGEKPAPGGIFIAALDIVARGGLRYHGR*
Ga0150985_1180891872	3300012212	Avena Fatua Rhizosphere	VDTNCFFGRQKEMIKTQDNASIRTLRRALATVGSEERLAAELHVSLIDLSSWLSGERIAPNEVFIEALDIVARTRRGAG*
Ga0150985_1222932212	3300012212	Avena Fatua Rhizosphere	VDTNCFFGRQEKMTKAQDNASIRTLRRALATVGSEERLAAALEVSLLDLSSWLSGERVAPSPVFIKALDIVAKTRRGAA*
Ga0150984_1169146422	3300012469	Avena Fatua Rhizosphere	MIKTQDNASIRTLRRALATVGSEERLAAELHVSLIDLSSWLSGERIAPNEVFIEALDIVARTRRGAG*
Ga0150984_1209505432	3300012469	Avena Fatua Rhizosphere	VDTNCFFGRQEKMIKAQDNASIRTLRRALATLGSEERLAAELEVSLLDLSSWLSGERMAPNEVFITALDIVAKTPRGAG*
Ga0150984_1222600562	3300012469	Avena Fatua Rhizosphere	VDTNCFFGRQEKMTKAQDNASIRTLRRALATVGSEERLAAALEVSLLDLSSWLSGERIAPSEVFIRALDIVAKTRRGAA*
Ga0134079_105548672	3300014166	Grasslands Soil	MKTMGKDTATILTLRRALATIGSEERLAAALNCSPLELVRWLSGEKPAPSEVFIAALDIVASLGQACSQPRARRA*
Ga0182000_104696972	3300014487	Soil	MRKTPDTASIRTLRRALATLGSEERLAAEMHVSLVELSSWLSGERIAPSDVFIKALDIVARTRRGAA*
Ga0066667_100671552	3300018433	Grasslands Soil	MQKETASIRTLRRALETVGSEERLAAALNVAPLDLVRWLSGESPPPDGVFMAALDIVAGTRKRRHR
Ga0066662_114513572	3300018468	Grasslands Soil	MGKDTATTRTLRRALATIGSEERLAAALNCSPLELVRWLSGEKPAPSEVFIAALDIVARARHA
Ga0196977_10545612	3300020146	Soil	MKQKDTASIRTLRRALATVGSEERLAAALGVSVVDLSSWLSGERVAPGEVFMAALDIVAKTPRGAA
Ga0196964_101314432	3300020202	Soil	MQKDTASIRTLRRALATVGSEERLAAELGVSVVDLSSWLSGERVAPSPVFMKALDIVAKT
Ga0196964_101383202	3300020202	Soil	MERNCFFFGRQENMQKDTASIRTLRRALATVGSEERLAAELGVSVVDLSSWLSGERIAPSEVFMKALDIVARTRRGAA
Ga0207684_104875031	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VNQDRMGKDTATIRTLRRALATIGSEERLAAALDCSPLELVRWLSGEQPAPGEIFIAALDIVARGGLRHHGR
Ga0207707_100050252	3300025912	Corn Rhizosphere	MKSKDTASIRTLRRALATLGSEERLAAELQVSVLDVSSWLSGERVAPSEVFIKALDIVARTRPGSA
Ga0207660_103828393	3300025917	Corn Rhizosphere	LKMTDTASIRTLRRALATLGSEERLAAELGVSPVDLAAWLAGERVAPGEVFIAALDIVARKPRGAG
Ga0207646_113546972	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RMGKDTATIRTLRRALATIGSEERLAAALDCSPLELVRWLSGEQPAPGEIFIAALDIVARGGLRHHGR
Ga0207687_108303982	3300025927	Miscanthus Rhizosphere	GICVSSNCFFGRQAEMKSTDTASVRTLRRALAMLGSEERLAAELQVSVIDVASWLSGERIAPGEVFIKALDIVARTRRGAA
Ga0207701_114300752	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNCFLGRQEDMIRTQDTASVRTLRRALATLGSEERLAAELQVSLVELSSWLSGERIAPSEVFIKALDIVARTRRGAG
Ga0207644_108291941	3300025931	Switchgrass Rhizosphere	MKSTDTASVRTLRRALAMLGSEERLAAELQVSVIDVASWLSGERIAPGEVFIKALDIVARTRRGAA
Ga0209238_10954382	3300026301	Grasslands Soil	MGKDTATSRTLRRALATIGSEERLAAALNCSPLELVRWLSGEKPAPSEVFIAALDIVARARHA
Ga0209055_100401413	3300026309	Soil	MGEDTATTRTLRRALATIGSEEHLAAALNCSPLDLACWLSGEKAAPGEVFIAALDIVAGVGHRHRRRR
Ga0209153_10370994	3300026312	Soil	MGKDTATTRTLRRALATIGSEERLAAALNCSPLELVRWLSGEKPAPSEVFIAALDIVASMGSGPRARRA
Ga0209686_11398441	3300026315	Soil	EDTATTRTLRRALATIGSEEHLAAALNCSPLDLACWLSGEKAAPGEVFIAALDIVAGVGHRHRRRR
Ga0209152_102106632	3300026325	Soil	MGKDTATTRTLRRALATIGSEEHLAAALNCSPLDLARWLSGEKAAPGEVFIAALDIVAGVGHRHRRRR
Ga0209057_11644052	3300026342	Soil	MGKDTATTRTLRRALATIGNEEHLAAALNCSPLDLARWLSGEKVAPGEVFIAALDIVAGVGHRHRRRR
Ga0209474_100403373	3300026550	Soil	MGKDTATTRTLRRALATIGSEEHLAAALNCSPLDLACWLSGEKAAPGEVFIAALDIVAGVGHRHRRRR
Ga0310888_101793322	3300031538	Soil	MKSTDTASVRTLRRALATLGSEERLAAELQVSVIDVASWLSGERIAPGEVFIKALDIVARTRRGAA
Ga0307469_106032412	3300031720	Hardwood Forest Soil	MGKETATIRTLRRALATIGSEEHLAAALECSPLELVRWLSGEKPAPGEVFIAALDIVARGGLRHHGS
Ga0310904_113022482	3300031854	Soil	DMNCFLGRQEDMIRTQDTASVRTLRRALATLGSEERLAAELQVSLVELSSWLSGERIAPSEVFIKALDIVARTRRGAA
Ga0310884_105628072	3300031944	Soil	RTLRRALATLGSEERLAAELQVSLVELSSWLSGERIAPSEVFIKALDIVARTRRGAG
Ga0310884_109812011	3300031944	Soil	ILFGICVSSNCFFGRQAEMKSTDTASVRTLRRALAMLGSEERLAAELQVSVIDVASWLSGERIAPGEVFIKALDIVARTRRGAA
Ga0307416_1018849352	3300032002	Rhizosphere	MQQKDTASIRTLRRALATVGSEERLAAALGVSVVDLSSWLSGEQVAPGEVFMAALDIVAKTPRGAA
Ga0307471_1007116393	3300032180	Hardwood Forest Soil	MTRSTASIRTLRRALATLGSEERLAAELGCSLLDLMEWLSGETPAPDAAFIAALDIVAGVPKKRQGAG
Ga0307472_1026046972	3300032205	Hardwood Forest Soil	MGKETATIRTLRRALATIGSEEHLAAALECSPLELVRWLSGEKPAPGEVFVAALDIVARGGLRHHGS
Ga0310810_102565222	3300033412	Soil	MLKMTDTASIRTLRRALATLGSEERLAAELGVSPVDLAAWLAGERVAPGEVFIAALDIVARKPRGAG
Ga0310810_108022452	3300033412	Soil	MKSKDTASLRTLRRALATLGSEERLAAELQVSVLDVSSWLSGERIAPGEVFIKALDIVARTRPGAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084655

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences