NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F084697

Metagenome Family F084697

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084697
Family Type Metagenome
Number of Sequences 112
Average Sequence Length 74 residues
Representative Sequence REPNLTRLNGGFSSLIEHLQSADMAPTVPMVTAATELQKVLTKLMADWNQFKTKDVAAINEQLRAANKPVLNP
Number of Associated Samples 79
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.11 %
% of genes from short scaffolds (< 2000 bps) 97.32 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (85.714 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere
(15.179 % of family members)
Environment Ontology (ENVO) Unclassified
(64.286 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(68.750 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 57.43%    β-sheet: 0.00%    Coil/Unstructured: 42.57%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF04134DCC1-like 90.18
PF13594Obsolete Pfam Family 4.46
PF00449Urease_alpha 1.79
PF07969Amidohydro_3 1.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG3011Predicted thiol-disulfide oxidoreductase YuxK, DCC familyGeneral function prediction only [R] 90.18
COG0804Urease alpha subunitAmino acid transport and metabolism [E] 1.79

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.71 %
UnclassifiedrootN/A14.29 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000532|CNAas_1002125All Organisms → cellular organisms → Bacteria1470Open in IMG/M
3300000891|JGI10214J12806_10414892All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300000953|JGI11615J12901_10025751All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300000953|JGI11615J12901_10347694All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300002896|JGI24802J43972_1021494All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300004114|Ga0062593_101477255All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300004114|Ga0062593_103310706All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium517Open in IMG/M
3300004156|Ga0062589_100553518All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae985Open in IMG/M
3300004156|Ga0062589_101876490All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300004643|Ga0062591_100660565All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300005293|Ga0065715_10033443All Organisms → cellular organisms → Bacteria1291Open in IMG/M
3300005293|Ga0065715_10452771All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300005293|Ga0065715_10843057All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300005294|Ga0065705_10035606All Organisms → cellular organisms → Bacteria993Open in IMG/M
3300005294|Ga0065705_10149722All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1969Open in IMG/M
3300005294|Ga0065705_10583893All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300005294|Ga0065705_10913633All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005295|Ga0065707_11128985All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300005330|Ga0070690_100811995All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300005334|Ga0068869_101173808All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300005338|Ga0068868_102388558All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005341|Ga0070691_10450972All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300005345|Ga0070692_10309542All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300005345|Ga0070692_10669041All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300005354|Ga0070675_102139059All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300005364|Ga0070673_101220171All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300005543|Ga0070672_101233062All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300005564|Ga0070664_102203249All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005564|Ga0070664_102220163All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium521Open in IMG/M
3300005577|Ga0068857_102481863All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300005617|Ga0068859_101651923Not Available708Open in IMG/M
3300005618|Ga0068864_101351593All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300005841|Ga0068863_101948202All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300005842|Ga0068858_100765645All Organisms → cellular organisms → Bacteria941Open in IMG/M
3300005844|Ga0068862_100285561All Organisms → cellular organisms → Bacteria1514Open in IMG/M
3300005844|Ga0068862_102674850All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300006058|Ga0075432_10086058All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300006169|Ga0082029_1254071All Organisms → cellular organisms → Bacteria1798Open in IMG/M
3300006169|Ga0082029_1295958All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300006169|Ga0082029_1408839All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300006804|Ga0079221_10567356All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300006914|Ga0075436_101138788All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300006954|Ga0079219_11814623All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300009098|Ga0105245_13093802All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300009148|Ga0105243_10569734All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300009162|Ga0075423_10783424All Organisms → cellular organisms → Bacteria1008Open in IMG/M
3300009162|Ga0075423_12602132All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium553Open in IMG/M
3300009174|Ga0105241_10988621All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300009174|Ga0105241_12544858All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300009177|Ga0105248_11051944All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300009177|Ga0105248_11896572All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300009553|Ga0105249_10819220All Organisms → cellular organisms → Bacteria995Open in IMG/M
3300009789|Ga0126307_11547579All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300009840|Ga0126313_11330831All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300010036|Ga0126305_10113419All Organisms → cellular organisms → Bacteria1645Open in IMG/M
3300010042|Ga0126314_10382672All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300010047|Ga0126382_12080505All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium543Open in IMG/M
3300010166|Ga0126306_10588833All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300010373|Ga0134128_11545765Not Available730Open in IMG/M
3300010375|Ga0105239_11264437All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes851Open in IMG/M
3300010399|Ga0134127_10890683All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300010399|Ga0134127_11374659Not Available776Open in IMG/M
3300010399|Ga0134127_11990150Not Available659Open in IMG/M
3300010399|Ga0134127_13547254All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium511Open in IMG/M
3300010400|Ga0134122_11318311Not Available731Open in IMG/M
3300012899|Ga0157299_10095533Not Available760Open in IMG/M
3300013297|Ga0157378_12661057All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium553Open in IMG/M
3300013307|Ga0157372_11767298All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium711Open in IMG/M
3300014325|Ga0163163_10673182All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300014325|Ga0163163_11573698Not Available718Open in IMG/M
3300014326|Ga0157380_12088786Not Available629Open in IMG/M
3300014326|Ga0157380_12912386All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium545Open in IMG/M
3300014745|Ga0157377_10617518All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria776Open in IMG/M
3300014745|Ga0157377_10666110Not Available751Open in IMG/M
3300014968|Ga0157379_10570940All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300015262|Ga0182007_10092682All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300018476|Ga0190274_11360474All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium798Open in IMG/M
3300025900|Ga0207710_10579691All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium585Open in IMG/M
3300025904|Ga0207647_10808616All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium504Open in IMG/M
3300025908|Ga0207643_11117150All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium508Open in IMG/M
3300025911|Ga0207654_11232255All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium545Open in IMG/M
3300025912|Ga0207707_10144937All Organisms → cellular organisms → Bacteria2076Open in IMG/M
3300025913|Ga0207695_11709194All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium510Open in IMG/M
3300025920|Ga0207649_10732312Not Available768Open in IMG/M
3300025931|Ga0207644_11068995Not Available678Open in IMG/M
3300025940|Ga0207691_10412994All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300025945|Ga0207679_10121340All Organisms → cellular organisms → Bacteria2081Open in IMG/M
3300025945|Ga0207679_10772717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes875Open in IMG/M
3300025960|Ga0207651_10783026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes845Open in IMG/M
3300025960|Ga0207651_11839718All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300026035|Ga0207703_10271988All Organisms → cellular organisms → Bacteria1535Open in IMG/M
3300026035|Ga0207703_10463984All Organisms → cellular organisms → Bacteria1185Open in IMG/M
3300026035|Ga0207703_10578681All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300026035|Ga0207703_10638699All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300026088|Ga0207641_10550183All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300026088|Ga0207641_11794404All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300026089|Ga0207648_10294358All Organisms → cellular organisms → Bacteria1454Open in IMG/M
3300026095|Ga0207676_11386780Not Available699Open in IMG/M
3300026142|Ga0207698_11446611Not Available702Open in IMG/M
3300028380|Ga0268265_10876437Not Available880Open in IMG/M
3300028380|Ga0268265_12053612All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium579Open in IMG/M
3300028381|Ga0268264_10508361All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300028381|Ga0268264_11932496All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium599Open in IMG/M
3300031548|Ga0307408_100671294All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300031548|Ga0307408_101198424All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300031716|Ga0310813_10869133All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300031716|Ga0310813_12296642All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium511Open in IMG/M
3300031720|Ga0307469_10875627All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300031852|Ga0307410_10992324Not Available724Open in IMG/M
3300032421|Ga0310812_10201441All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300033412|Ga0310810_10404681All Organisms → cellular organisms → Bacteria1406Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere15.18%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.36%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil5.36%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.36%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.46%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere4.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.46%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.46%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.57%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.57%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest2.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere2.68%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.68%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.79%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.89%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.89%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.89%
Quercus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000532Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_AssembledHost-AssociatedOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300002896Soil microbial communities from Manhattan, Kansas, USA - Sample 300um NexteraEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
CNAas_100212513300000532Quercus RhizosphereGLPSGTIDMRDPNLTRLNGGFSSLIEHLQSADLPPTVPMVTAATELQKILTKLLANWEQFQTKDVAAINEQLRAANQPALVP*
JGI10214J12806_1041489213300000891SoilLNNGFSAMLDHLQDADLAPTEPMVTAATELQKVLTKLMADWDQFKTKDVATINEQLRAANQPVLNP*
JGI11615J12901_1002575123300000953SoilEPNLTRLNGGFSSLLEHLQSADLAPTEPTVTAATELQKVLKMLLADWETFKKTDVTAINQQLRAANQALLNP*
JGI11615J12901_1034769413300000953SoilALAGEGRGDGPGGGTIDVREPNLTKLNNGFSSLLEHLQSADLAPTQPMVNASFELQKVLTKLLADWEQLKRDVVPINEQLIRANQAPLIVK*
JGI24802J43972_102149413300002896SoilSSPGLPGGTIDMREPNLTRLNNGFSSLIEHLQTADLAPTVPMVTAATELQKVLTKLMGDWDQLKTKDVTAINVQLRAANQPPLNP*
Ga0062593_10147725513300004114SoilTRLNNGFSAMLDHLQDADLAPTEPMVTAATELQKVLTKLMADWDQFKTKDVATINEQLRAANQPVLNP*
Ga0062593_10331070613300004114SoilAIGGEGRGDASSPGLPGGTIDMREPNLTRLNNGYSSLIEHLQTADLAPTVPMVTAATELQKTLTKLMSDWDQLKTKDVATINEQLRAANQPVLNP*
Ga0062589_10055351833300004156SoilDKKAATIGGEGRGEGSSPGLPGGTIDVRDPNLTRLNGGFSSLLEHLQSADMAPTEPMVTAASELQKVLKKLLADWETFKTMDVAAINQQLRAANQPLLKP*
Ga0062589_10187649023300004156SoilNNGFSAMLDHLQDADLAPTEPMVTAATELQKVLTKLMADWDQFKTKDVAAINEQLRAANQPVLNP*
Ga0062591_10066056513300004643SoilKAATIGGEGRGEGTSPGLPGGTIDVRDPNLTRLNGGFSSLLEHLQSADMAPTEPMVTAASELQKVLKKLLADWETFKTMDVAAINQQLRAANQPLLKP*
Ga0065715_1003344333300005293Miscanthus RhizosphereLLDHLQSADLAPTVPTVTAATELQKVLTKLMADWSQFKTKDVAAINEQLRAANQPVLNP*
Ga0065715_1045277113300005293Miscanthus RhizosphereFSSLLEDLQNADLAPTQPMVSAATEMQKTLTKLLADWDTFKTKDVSAINEQLRAANQPVLNP*
Ga0065715_1084305723300005293Miscanthus RhizosphereTSPGLPGGTIDVRDPNLTRLNGGISSLLEHLQSADMAPTEPMITAATELQKALKKLLADWQTFKTTDVAAINQRLRAANQPLLNP*
Ga0065705_1003560613300005294Switchgrass RhizosphereGRGDGGSPGLPGGTIDMREPNLTRLNGGFSSLIEHLQSADVAPTVPMVTAATEXQKVLTKLMADWNQLKTKDVAAINXXLRAANKPSLNP*
Ga0065705_1014972213300005294Switchgrass RhizosphereGLPGGTIDVREPNLTRLNGGFSSLLEHLQSADLAPTVPTVTAATELQKVLKKLLSDWETFKKTDVAAINQQLRAANQRLLNP*
Ga0065705_1058389323300005294Switchgrass RhizosphereRLNGGYSSLLEHLQSADIAPTQPMLTASSELQKVLKKLLSDWEALKTTEVAAMNQQLRAANQPLLNP*
Ga0065705_1091363323300005294Switchgrass RhizospherePGGTIDMREPNLTRLNNGFSSLLEHLQNADLAPTQPTVTAATELQKILAKLMADWNEFKTKDVAAMNEQLRAANQPVLNP*
Ga0065707_1112898523300005295Switchgrass RhizosphereSLLEHLQSADLAPTVPTVTAATELQKVLKKLLSDWETFKKTDVAAINQQLRAANQRLLNP
Ga0070690_10081199513300005330Switchgrass RhizosphereIEHLQTADLAPTQPMVTAAAELQKVLTKLMADWDQLKTKDIAAINEQLRVANQPPVNP*
Ga0068869_10117380813300005334Miscanthus RhizosphereIAGEGRGDGPGGGTIDVREPNLTRLNNGFSSLLEDLQSADLAPTQPMVNASSELQKVLTKLLADWEQLKRDMVPINEQLQRANQSPLVVK*
Ga0068868_10238855813300005338Miscanthus RhizosphereFSALLDHLQDPDLAPTEPMVVAATELQKTLTKLMADWNQLKTKDVAAMNEQLRAANQPLLNP*
Ga0070691_1045097233300005341Corn, Switchgrass And Miscanthus RhizosphereADMAPTQPMLTAASELQKTLTKLLADWEALKTTDVQAMNAQLRAANQPVLNP*
Ga0070692_1030954233300005345Corn, Switchgrass And Miscanthus RhizosphereREPNLTRLNGGFSSLIEHLQSADMAPTVPMVTAATELQKVLTKLMADWNQFKTKDVAAINEQLRAANKPVLNP*
Ga0070692_1066904123300005345Corn, Switchgrass And Miscanthus RhizosphereGEGRGDGPGGGTIDVREPNLTKLNNGFSSLLEHLQSADLAPTQPMVNASFELQKVLTKLLADWEQLKRDVVPINEQLQRSNQAPLIVK*
Ga0070675_10213905923300005354Miscanthus RhizosphereEHLQTADLAPTQPMVTAAAELQKTLAKLTADWNELKTKDVAAINQQLRAANQPVLNP*
Ga0070673_10122017123300005364Switchgrass RhizosphereKKAAAIGGEGRGEGTSPGLPGGTIDVRDPNLTRLNGGISSLLEHLQSADMAPTDPMVTAATELQKALKKLLADWQTFKTTDVAAINQRLRAANQPLLNP*
Ga0070672_10123306213300005543Miscanthus RhizosphereSPGLPGGTIDMREPNLTRLNNGFSSLIEHLQTADLAPTQPMVTAATELQKTLTKLMSDWDQLKTKDIAAINEQLRAANKPVLNP*
Ga0070664_10220324913300005564Corn RhizosphereSLIEHLQTADLAPTQPMVIAATELQKTLAKLMADWDQLKTKDVAAINQQLRAANQPPLNP
Ga0070664_10222016323300005564Corn RhizospherePNLTRLNGGFSSLIEHLQSADMAPTMPMVNAATELQKVLTKLMMDWNQFKTKDVAAINEQLRAANKPVLNP*
Ga0068857_10248186313300005577Corn RhizosphereGLPGGTIDMREPNLTRLNNGFSAMLDHLQDADLAPTEPMVTAATELQKVLTKLMADWDQFKTKDVAAINEQLRAANQPVLNP*
Ga0068859_10165192313300005617Switchgrass RhizosphereKAAAIAGEGRGDGPGGGTIDVREPNLTRLNGGFSSLLEQLQSADLAPTQPMVSASFELQKVLLKLLVDWENLKSNEITAINGQLRAANQPPLTF*
Ga0068864_10135159323300005618Switchgrass RhizosphereKKAAAIGGEGRSDASSPGLPGGTIDMREPNLTRLNNGFSAMLDHLQDADLAPTEPMVTAATELQKVLTKLMADWDQFKTKDVATINEQLRAANQPVLNP*
Ga0068863_10194820223300005841Switchgrass RhizosphereLLEHLQSADMAPTEPMITAATELQKALKKLLADWQTFKTTDVAAINQRLRAANQPLLNP*
Ga0068858_10076564533300005842Switchgrass RhizosphereEGRGDGPGGGTIDVREPNLTKLNNGFSSLLEHLQSADLAPTQPMVNASSELQKVLTKLLADWEQLKRDMVPINEQLQRANQSPLVVNE*
Ga0068862_10028556113300005844Switchgrass RhizosphereRDPNLTRLNGGFSSLLEHLQSADMAPTEPMVTAASELQKVLKKLLPDWETFKTMDVAAINQQLRAANQPLLKP*
Ga0068862_10267485023300005844Switchgrass RhizosphereRDPNLTRLNGGFSSLLEHLQSADIAPTEPMVTAATELQKVLKKLLADWQTFKTTDVAAINQRLRAANQPLLNP*
Ga0075432_1008605813300006058Populus RhizosphereQSADMAPTQPTLTAASELQKTLQKLLADWEALKTTDVATINQQLRAANQPVLNP*
Ga0082029_125407133300006169Termite NestGFSSLIEHLQSADVAPTVPMVTAAPELQKVLTKLLADWNQFETKDVAAINEQLRAANKPVLKP*
Ga0082029_129595823300006169Termite NestGGTIDVRDPNLRRLNNGFSSLLEHLQNADLAPTVPMVTAASELQKVLAKLLADWDQFKTKDVAAINERLRAANQPLLTP*
Ga0082029_140883923300006169Termite NestLDKKLAALAGEGRGDGPGGGTIDVREPNLTRLNGGFSSLLEHLQSADLAPTQPMVQASFELQKVLAKLLADWENLKHTDIKAINAQLPKPNQPQLIFR*
Ga0079221_1056735633300006804Agricultural SoilGGVDVRDPNFTRLNGGFSSLLGDLDSADLAPTQPMITAATEMQQALTKLLADWETFKTTNVAAVNAQLRVANQPVLNP*
Ga0075436_10113878823300006914Populus RhizosphereLMEHLQNADLAPTIPMTTAARELQQTLTKLMTAWTDLRTRDIAAINEQLRAANQPALNP*
Ga0079219_1181462313300006954Agricultural SoilAVAIGGEGRSDASSPGLPGGTIDVREPNLTRLNNGFSALLDTLQDADLAPTQPMVAAASELQKTLAKLMADWDQLKAKDVAAMNEQLRAANQPVLNP*
Ga0105245_1309380223300009098Miscanthus RhizosphereEGTSPGLPGGTIDVRDPNLTRLNGGFSSLLEHLQSADMAPTDPMVTAATELQKALKKLLADWQTFKTTDVAAINQRLRAANQPLLNP*
Ga0105243_1056973433300009148Miscanthus RhizosphereEGRSDASSPGLPGGTIDMREPNLTRLNNGFSAMLDHLQDADLAPTEPMVTAATELQKVLTKLMADWDQFKTKDVAAINEQLRAANQPVLNP*
Ga0075423_1078342433300009162Populus RhizosphereAGEGRGEGPGGGTIDVREPNLTKLNNGFSSLLEHLQSADLAPTQPMVSASFELQKVLTKLLADWEQLKRDVVPINEQLQRSNKAPLIVK*
Ga0075423_1260213223300009162Populus RhizosphereETNLTRLNGGFSSLIEQLQNADLAPTMPMITAATESQKTLTRLLASWNELKTKDVAAINEQLRAANQPPLNP*
Ga0105241_1098862113300009174Corn RhizosphereHLQSADMAPTQPMLTAASELQKNLQKLLMDWETFKTTDVAAINQQLRAANQPILNP*
Ga0105241_1222323713300009174Corn RhizospherePNLTRLNGGFSSLLEQLQSADLAPTQPMVSASFELQKVLLKLLVDWENLKSNEITAINGQLRAANQPPLTF*
Ga0105241_1254485823300009174Corn RhizosphereLLDDLQSADVAPTQAMLTASSELQKTLKKLLADWENLKTTEVAAINERLRAANKPVLNP*
Ga0105248_1105194433300009177Switchgrass RhizosphereQSADMAPTQPMLTAASELQKNLQKLLMDWETFKTTDVAAINQQLRAANQPVLKP*
Ga0105248_1189657223300009177Switchgrass RhizosphereLTRLNNGFSSLIEHIQTADLAPTVPMVTAATELQKVLTKLMEDWDQLKTKDVAAINEQLRAANQPPLNP*
Ga0105249_1081922033300009553Switchgrass RhizosphereGEGRGDASSPGLPGGTIDMREPNLTRLNNGFSSLIEHLQTADLAPTVPMVTAATELQKVLTKLMADWDQLKTKDVAAINVQLRAANQPPLNP*
Ga0126307_1154757913300009789Serpentine SoilRLNDGFSSLIEHLQNADLAPTAPMVSAGSELQKVLARLLEDWNTLKAKDVTAINEQLRAANQPVLKL*
Ga0126313_1133083123300009840Serpentine SoilADVAPTVPMVTAATELQRILSKLLGDWDQFKTKDVVAINEQLRAANQPALNP*
Ga0126305_1011341933300010036Serpentine SoilGFTSLIDHLQNADDAPTLPMVTAATELQKVLTKLLGDWEQLKAKDVAAINVELRAANQPPLTP*
Ga0126314_1038267233300010042Serpentine SoilDVREPNLTRLNNGFSSLLEHLQSADLAPTQQMVSASFELQGVLMKLLADWENLKSTEIAAINRQLRAANQPALTF*
Ga0126382_1208050513300010047Tropical Forest SoilNNGFSSLLEHLQTADLAPTVPMTTAASELQKVQTRLLADWSQLKTKDVAAINEQLRAANQPPLNP*
Ga0126306_1058883333300010166Serpentine SoilSSLIEHLQSADVAPALPIVTAATELQKTLATLMGEWNQLKTKDVAAINEQLRAANQPVLNP*
Ga0134128_1154576513300010373Terrestrial SoilTRLNGGFSSLLEHLQSADMAPTQPMLTAASELQKNLQKLLMDWETFKTTDVAAINQQLRAANQPVLNP*
Ga0105239_1126443713300010375Corn RhizosphereEGRGDGPGGGTIDVREPNLTRLNGGFSSLLEDLQSADLAPTQPMVNASFELQKVLLKLMADWENLKANEIAAINGQLRAANQPPLTF*
Ga0134127_1089068333300010399Terrestrial SoilGEGRGDASSPGLPGGAIDMREPNLTRLNNGYSSLIEHLQTADLAPTQPMVTAATELQKTLAKLMADWDQLKTKDVAAINQQLRAANQPLLNP*
Ga0134127_1137465913300010399Terrestrial SoilSADMAPTEPMVTAATELQKALKKLLADWQTFKTTDVAAINRQLRAANQPLLNP*
Ga0134127_1199015013300010399Terrestrial SoilIDTRDPNLTRLNGGFSSLLEHLQSADMAPTQPMLTASSELQRTLKKLLSDWETFKTTDVAAMNQQLRAANQPVLNP*
Ga0134127_1354725423300010399Terrestrial SoilIEHLQSADRAPTQPMLTAASELQKTLKKLLSDWETFKTTDVAAINEQLRAANKPVLNP*
Ga0134122_1131831113300010400Terrestrial SoilGGGGRSDASSPGLPGGTIDMREPNLTRLNNGFSAMLDHLQDADLAPTEPMVVAATELQKTLVKLMEDWNQFKSKDVAAINEQLRAANQPVLNP*
Ga0157299_1009553323300012899SoilEGRGEGTSPGLPGGTIDVRDPNLTRLNGGFSSLLEHLQSADMAPTEPMVTAATELQKVLKKLLADWQTFKTTDVVAINQQLRAANQPLLNP*
Ga0157378_1266105723300013297Miscanthus RhizosphereDGPGGGTIDVREPNLTKLNNGFSSLLEHLQSADLAPTQPMVNASFELQKVLTKLLADWEQLKREVVPINEQLLRSNQAPLIVK*
Ga0157372_1176729813300013307Corn RhizosphereIHGPGPLPDALAALDKKLTALGGKGRCDGPGGSTIDVREPNLTKLNNGFSSLLEHLQSADLAPTQPMVNASFELQNVLTKLLADWEQLKRDVVPINEQLQRSNQAPLIVK*
Ga0163163_1067318213300014325Switchgrass RhizosphereAAAIGGEGRGDASSPGLPGGTIDMREPNLTRLNNGYSSLIEHLQTADLAPTVPMVTAATELQKVLTKLMSDWDQLKTKDVAAINQQLRAANQPVLKP*
Ga0163163_1157369813300014325Switchgrass RhizosphereNLTRLNGGFASLLENLQSADLAPTQPTVVAATELQKALTKLLADWETFKTKDLTAINQQLRAANQPVLNP*
Ga0157380_1208878613300014326Switchgrass RhizosphereDLSPTVPMVTAATELQKVLTKLMSDWDQLKTKDIATINEQLRAANQPVLNP*
Ga0157380_1291238613300014326Switchgrass RhizosphereIDTRDPNLTRLNGGFSSLLEHLKSADMAPTQPILTAASELQKTMQKLLADWETLKTTDVAAINVQMRAANQPVLNP*
Ga0157377_1061751813300014745Miscanthus RhizosphereSSLLDNLQDADLAPTVPMVTASAELRKVLTQLLSDWNQLKSKDVAAINEQLRAANQPVLNP*
Ga0157377_1066611013300014745Miscanthus RhizosphereLQSADAAPTQPMLTAGGELQRTLKRLLSDWEALKKTDVAAINEQLRAANQPVVNP*
Ga0157379_1057094013300014968Switchgrass RhizosphereGFSSLLEHLQSADMAPTEPMVTAASELQKVLKKLLADWETFKTMDVAAINQQLRAANQPLLKP*
Ga0182007_1009268233300015262RhizosphereGDGGGPGGPIDVRDPNLTRLNGGFSSLLEDLQSADLAPTQPTITGATELQKALTKLLADWETLKTTDVTAINQQLRAANQPVLNP*
Ga0190274_1136047433300018476SoilLNALDKKAAAIAGEGRGEGGPGGAIDVRDPNLTRLNGGFSSLLDHLQNADLAPTQPMVTAATELQKTLTTLLDAWRAFHTVDVTTINLQLKAANKPLLTP
Ga0207710_1057969113300025900Switchgrass RhizosphereDTRDSNLTRLNGGFSSLLEHLQSADMAPTQPMLTAASELQKNLQKLLMDWETFKTTDVAAINQQLRAANQPVLKP
Ga0207647_1080861623300025904Corn RhizosphereEPRKRLPAHARVDQAPTEPMVTAATELQKILTKLLADWNQLKTKDLAAINEQLRAANQPVLNP
Ga0207643_1111715023300025908Miscanthus RhizosphereNNGFSAMLDHLQDADLAPTEPMVTAATELQKVLTKLMADWDQFKTKDVATINEQLRAANQPVLNP
Ga0207654_1123225513300025911Corn RhizosphereLLDDLQSADVAPTQAMLTASSELQKTLKKLLADWENLKTTEVAAINERLRAANKPVLNP
Ga0207707_1014493713300025912Corn RhizosphereQSADLAPTQPTITAATELQKALTKLLADWETLKTTDVTAINQQLRAANQPVLNP
Ga0207695_1170919413300025913Corn RhizospherePAFDKRALALAGEGRGDGPGGGIIDVREPNLTKLNNGFSSLLEHLQSADLAPTQPMVNASFELQKVLTKLLADWEQLKRDVVPINEQLLRSNQAPLIVK
Ga0207649_1073231233300025920Corn RhizosphereSSLLEHLQTADLAPTEPMVTAAAELQKIRQKLMTDWNQLKSKDVATINEQLRTANQPVLN
Ga0207644_1106899523300025931Switchgrass RhizosphereRGDGGAPGGSIDTRDPNLTRMNGGFSSLLEHLQSADMAPTQPMLTAASELQKTVQKLLADWETFKTTDVAAINQQLRAANQPILNP
Ga0207691_1041299433300025940Miscanthus RhizosphereLNNGFSSLLEHLQTADLPPTVPMTTAAAELQKTLTKLLADWNQFKTKDVVAINEQLRAANQPPLNP
Ga0207679_1012134033300025945Corn RhizosphereEHLQSADMAPTQPMLTAASELQKNLQKLLMDWETFKTTDVAAINQQLRAANQPVLKP
Ga0207679_1077271733300025945Corn RhizosphereDKKAAAIAGEGRGDGPGGGTIDVREPNLTRLNGGLSSLLDDLQSADLAPTQPMVNASFELQKVLLKLLADWENLKSNEITAINGQLRASNQPPLTF
Ga0207651_1078302613300025960Switchgrass RhizosphereNLTRLNNGFSALLDHLQEPDLAPTEPMVVAATELQKTLTKLMADWNQLKTKDVAAINEQLRAANQTVLNP
Ga0207651_1183971823300025960Switchgrass RhizosphereADLAPTVPMVTAATELQKVLTKLMADWDQLKTKDVAAINVQLRAANQPPLNP
Ga0207703_1027198813300026035Switchgrass RhizosphereGRGEGTSPGLPGGTIDVRDPNLTRLNGGFSSLLEHLQSADMAPTDPMVTAATELQKALKKLLADWQTFKTTDVGAINRQLRAANQPLLNP
Ga0207703_1046398433300026035Switchgrass RhizosphereGFSSLIEHLQTADLAPTQPMVTAAAELQKVLTKLMADWDQLKTKDVAAINVQLRAANQPPLNP
Ga0207703_1057868113300026035Switchgrass RhizosphereRAAAIGGEGRGDASSPGLPGGTIDMREPNLTRLNNGFSSLIEHLQTADLAPTVPMTTAAAELQKVLTKLMADWSQFKTKDVAAINEQLRAANQPVLNP
Ga0207703_1063869933300026035Switchgrass RhizosphereGTIDMREPNLTRLNNGFSALLDHLQDPDLAPTEPMVVAATELEKTLTKLMADWNQLKTKDVAAINEQLRAANQTVLNP
Ga0207641_1055018313300026088Switchgrass RhizospherePNLTRLNGSFSSLLEHLQSADMAPTRSMQEASIELQKALKKLLADWEQLQTIDVTAINQQLRAANKPVLKL
Ga0207641_1179440423300026088Switchgrass RhizosphereSSLIEHLQTADLAPTVPMVTAATELQKVLTKLMSDWDQLKTKDVAAINEQLRAANKPVLN
Ga0207648_1029435813300026089Miscanthus RhizosphereSPGLPGGTIDMREPNLTRLNNGFSAMLDHLQDADLAPTEPMITAASELQKTLEKLMADWNQLKAKDVAAMNEQLRAANQPVLNP
Ga0207676_1138678013300026095Switchgrass RhizosphereRMNNGFSAMLDHLQDADLAPTEPMVAAATELQKTLAKLLADWDQFKTKDVAAINEQLRAANQPVLNP
Ga0207698_1144661113300026142Corn RhizosphereTIDMREPNLTRLNNGYSSLIEHLQTADMAPTEPMVTAATELQKILTKLLADWNQLKTKDLAAINEQLRAANQPVLNP
Ga0268265_1087643713300028380Switchgrass RhizosphereGTIDMREPNLTRLNNGFSSLIEHLQTADLAPTQPMVIAATELQKTLAKLMSDWDQLKTKDIAAINQQLRAANQPPLNP
Ga0268265_1205361213300028380Switchgrass RhizospherePGGTIDLRDPNFTRLNGSFSSQLEHLQSADLPPTVPMVTASTELNKALTKLLADWETFKKKDVAAMNEQLRAANQPALNP
Ga0268264_1050836133300028381Switchgrass RhizosphereGLPGGTIDVRDPNLTRLNGGFSSLLEHLQSADMAPTDPMVTAATELQKALKKLLADWQTFKTTDVAAINQRLRAANQPLLNP
Ga0268264_1193249613300028381Switchgrass RhizosphereRLNNGYSSLIEHLQTADLAPTQPMVTAATELQKTLAKLMADWDQLKTKDVAAINQQLRAANQPLLNP
Ga0307408_10067129433300031548RhizosphereSLMEHLQNADLAPTVPMTTAAAELQKVQARLLADWNQLKTRDVAAINEQLRAANQPPLNP
Ga0307408_10119842423300031548RhizospherePNLTRLNGGFSSLIEHLQSADLPPTLPMVTAATELQKTLAKLMGDWNELKTKDVTAINEQLRTANQPVLNP
Ga0310813_1086913313300031716SoilAPTEPMVTAATGLQQALTKLLADWDVLKKTNVTAINEQLKAANKPVLNP
Ga0310813_1229664223300031716SoilPGGTIDMREPNLTRLNNGYSSLIEHLQTADLAPTVPMITAATELQKTLTKLMSDWDQLKTKDVATINEQLRAANQPVLNP
Ga0307469_1087562713300031720Hardwood Forest SoilPNLTRLNGGFSSLLEHLQSADLAPTQPTLTASSELQKTLKKLLADWEALKTTDVAAINEQLRAANQPVLNP
Ga0307410_1099232413300031852RhizosphereMEHLQNADLAPTVPMTTAAAELQKVQARLFADWNQLKTRDVAAINEQLRAANQPPLNP
Ga0310812_1020144133300032421SoilLQNADLAPTQPMVTASTEMQKALTKLLADWETFKTKDIPAINEQLRAANQPVLNP
Ga0310810_1040468113300033412SoilEGRGDGGGPGGPIDVRDPNLTRLNGGFSSLLEDLQSADLAPTQPTITAATELQKALTKLLADWETLKTTDVTAINQQLRAANQPVLNP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.