NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F084760

Metagenome Family F084760

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084760
Family Type Metagenome
Number of Sequences 112
Average Sequence Length 79 residues
Representative Sequence SAPALTHGFQIAFYALAATAAVGAVIARLLIEPQPSGAEREPEADERQVAVVSQHTPVCRARGVLAGELQAN
Number of Associated Samples 100
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 97.32 %
% of genes from short scaffolds (< 2000 bps) 91.07 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (90.179 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(25.893 % of family members)
Environment Ontology (ENVO) Unclassified
(41.071 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(73.214 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 29.00%    β-sheet: 0.00%    Coil/Unstructured: 71.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF00857Isochorismatase 47.32
PF00753Lactamase_B 8.93
PF00106adh_short 7.14
PF13561adh_short_C2 3.57
PF12680SnoaL_2 3.57
PF00730HhH-GPD 2.68
PF14342DUF4396 1.79
PF00083Sugar_tr 0.89
PF12802MarR_2 0.89
PF13462Thioredoxin_4 0.89
PF03176MMPL 0.89
PF03358FMN_red 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 47.32
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 47.32
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 2.68
COG0177Endonuclease IIIReplication, recombination and repair [L] 2.68
COG1059Thermostable 8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 2.68
COG1194Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairsReplication, recombination and repair [L] 2.68
COG22313-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamilyReplication, recombination and repair [L] 2.68
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 0.89
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 0.89

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.18 %
UnclassifiedrootN/A9.82 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000891|JGI10214J12806_12061618All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300005167|Ga0066672_10910556All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales544Open in IMG/M
3300005181|Ga0066678_10613614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria724Open in IMG/M
3300005294|Ga0065705_10844561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria590Open in IMG/M
3300005330|Ga0070690_101378502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria567Open in IMG/M
3300005336|Ga0070680_101171541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria664Open in IMG/M
3300005337|Ga0070682_100644196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria843Open in IMG/M
3300005356|Ga0070674_101732310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria565Open in IMG/M
3300005366|Ga0070659_101617006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria579Open in IMG/M
3300005406|Ga0070703_10156064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria861Open in IMG/M
3300005435|Ga0070714_102233406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria533Open in IMG/M
3300005436|Ga0070713_100312258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1450Open in IMG/M
3300005436|Ga0070713_101356034All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300005445|Ga0070708_100657175All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300005445|Ga0070708_100962646All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300005467|Ga0070706_101446961All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria629Open in IMG/M
3300005471|Ga0070698_100706390All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria950Open in IMG/M
3300005545|Ga0070695_100635275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria841Open in IMG/M
3300005555|Ga0066692_10706001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria625Open in IMG/M
3300005559|Ga0066700_11100382All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1519Open in IMG/M
3300005618|Ga0068864_102262641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria550Open in IMG/M
3300005844|Ga0068862_100333842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1402Open in IMG/M
3300006163|Ga0070715_10655449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia622Open in IMG/M
3300006173|Ga0070716_100575324All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria844Open in IMG/M
3300006175|Ga0070712_100211879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1528Open in IMG/M
3300006175|Ga0070712_101397951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales611Open in IMG/M
3300006796|Ga0066665_10714336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria793Open in IMG/M
3300006804|Ga0079221_10149436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1220Open in IMG/M
3300006844|Ga0075428_100908920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059933Open in IMG/M
3300006853|Ga0075420_100765896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria831Open in IMG/M
3300006854|Ga0075425_100647454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1214Open in IMG/M
3300006903|Ga0075426_11234847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria567Open in IMG/M
3300006904|Ga0075424_100308256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1685Open in IMG/M
3300006954|Ga0079219_11205146All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300009012|Ga0066710_101068607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1247Open in IMG/M
3300009038|Ga0099829_10432869All Organisms → cellular organisms → Bacteria1089Open in IMG/M
3300009090|Ga0099827_10958102All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300009090|Ga0099827_11998910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1503Open in IMG/M
3300009137|Ga0066709_100148343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2993Open in IMG/M
3300009147|Ga0114129_10417104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1766Open in IMG/M
3300009162|Ga0075423_10631362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1129Open in IMG/M
3300009162|Ga0075423_11973405Not Available631Open in IMG/M
3300009176|Ga0105242_11696070Not Available668Open in IMG/M
3300009176|Ga0105242_12743388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1543Open in IMG/M
3300009840|Ga0126313_10021376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4311Open in IMG/M
3300010042|Ga0126314_11492768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1508Open in IMG/M
3300010333|Ga0134080_10603020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1534Open in IMG/M
3300010335|Ga0134063_10406682All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300010373|Ga0134128_11257726All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300012189|Ga0137388_11222348All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300012200|Ga0137382_10186569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1421Open in IMG/M
3300012200|Ga0137382_11171581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1547Open in IMG/M
3300012201|Ga0137365_10831045All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300012204|Ga0137374_10504910Not Available938Open in IMG/M
3300012205|Ga0137362_11323212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1606Open in IMG/M
3300012208|Ga0137376_11599825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1543Open in IMG/M
3300012208|Ga0137376_11806470All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1502Open in IMG/M
3300012210|Ga0137378_11049373All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300012211|Ga0137377_10089760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2903Open in IMG/M
3300012349|Ga0137387_10700133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium733Open in IMG/M
3300012350|Ga0137372_10349082All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1133Open in IMG/M
3300012353|Ga0137367_10123138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1902Open in IMG/M
3300012354|Ga0137366_10855068Not Available644Open in IMG/M
3300012354|Ga0137366_11010260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1578Open in IMG/M
3300012356|Ga0137371_10179698All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1658Open in IMG/M
3300012357|Ga0137384_10417461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1107Open in IMG/M
3300012360|Ga0137375_10183197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2005Open in IMG/M
3300012495|Ga0157323_1012134Not Available705Open in IMG/M
3300012582|Ga0137358_10075288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2269Open in IMG/M
3300012918|Ga0137396_10782681All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300012922|Ga0137394_10228339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1591Open in IMG/M
3300012930|Ga0137407_11294807All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300012987|Ga0164307_11797383All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1519Open in IMG/M
3300013306|Ga0163162_10064900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3697Open in IMG/M
3300015053|Ga0137405_1027796All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1334Open in IMG/M
3300015371|Ga0132258_13506554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1075Open in IMG/M
3300015372|Ga0132256_101714572All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300015373|Ga0132257_100456280All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1562Open in IMG/M
3300015373|Ga0132257_102180204Not Available717Open in IMG/M
3300018433|Ga0066667_11497748All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300018468|Ga0066662_10552703All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1064Open in IMG/M
3300021344|Ga0193719_10438834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1533Open in IMG/M
3300021363|Ga0193699_10463565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1520Open in IMG/M
3300025918|Ga0207662_10277881All Organisms → cellular organisms → Bacteria1107Open in IMG/M
3300025922|Ga0207646_10456857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1152Open in IMG/M
3300025924|Ga0207694_11790472All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1516Open in IMG/M
3300025929|Ga0207664_11436989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1611Open in IMG/M
3300025931|Ga0207644_10590207All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300025935|Ga0207709_10440509All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300025939|Ga0207665_11525813All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria531Open in IMG/M
3300025941|Ga0207711_10391085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1291Open in IMG/M
3300025942|Ga0207689_10122390All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2140Open in IMG/M
3300026121|Ga0207683_10946615All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria800Open in IMG/M
3300026557|Ga0179587_10663828All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300027655|Ga0209388_1219577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1522Open in IMG/M
3300027846|Ga0209180_10254305All Organisms → cellular organisms → Bacteria1010Open in IMG/M
3300027880|Ga0209481_10518620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1616Open in IMG/M
3300027907|Ga0207428_11095445All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1557Open in IMG/M
3300028381|Ga0268264_10292317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1531Open in IMG/M
3300028768|Ga0307280_10185760All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300028796|Ga0307287_10360612Not Available548Open in IMG/M
3300028828|Ga0307312_11078432Not Available531Open in IMG/M
3300028875|Ga0307289_10243803All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300028885|Ga0307304_10436361All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300031720|Ga0307469_11831620All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300031720|Ga0307469_12203339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1537Open in IMG/M
3300031754|Ga0307475_11317659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1559Open in IMG/M
3300032003|Ga0310897_10364851All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300032174|Ga0307470_11540212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1554Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil25.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere12.50%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.57%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.57%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.68%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.79%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.79%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.79%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.79%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.79%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.89%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.89%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012495Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610Host-AssociatedOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10214J12806_1206161823300000891SoilNHYVHSHAGTTAFSAPALTHGFQIAFYALAATAAVGAVIAALLIEPQPSEAEREPDAGERQVAVVSQYTPVCHETTTRIPALSGGSR*
Ga0063356_10569212923300004463Arabidopsis Thaliana RhizosphereLAATAAVGAVIAVLLIEPQPAEAEREPEADERQVAVVSQHTPVCRTRGVLAGELQTN*
Ga0066672_1091055613300005167SoilALTHGFQIAFYVLAATAAAGAVLAALLIESQPAQAEREPEVGEPQVAVVSQHTPVCRTRRVLGGQLEAN*
Ga0066678_1061361423300005181SoilPALVHGFQIAFYSLAATAAVGAVIARLLIEPQPSGAEREPEADERQVAVVSQHTPVCRAPGVLAGELQAN*
Ga0065705_1084456113300005294Switchgrass RhizosphereVGVAAATTIATTFTNHYVDSHAGISALSGAALTHGFQIAFYVLAATAAVGAVIAGLLLESQPAQAEPAPEFGEPQVAVVSQHTPVCRTRRVLAGHLEAN*
Ga0070690_10137850213300005330Switchgrass RhizosphereVAAATTIATTFTNRYVHSHAGSTPFSGPALTHGFQIAFYALAATAAVGAVIAAVLIEPQRAQAEPEPEADERQVPATSQHTPVCRSRRVLAGELQAN*
Ga0070680_10117154113300005336Corn RhizosphereALTHGFQIAFYALAATAAVGAVIAAVLIEPQRAEAEPEPEADERQVPATSQHTPVCRSRRVLAGELQAN*
Ga0070682_10064419613300005337Corn RhizosphereFQIAFYALAATAAAGAVIAAVLIEPQPAEAEPEPDAGERQVPAASQHTPVCRARRVLAGELHAN*
Ga0070674_10173231023300005356Miscanthus RhizosphereALTHGFQIAFYALAATAALGAVIAAVLIEPQPAQAEPKPEVDERQVAVVSQHTPVCRARGVLAGELQAN*
Ga0070659_10161700613300005366Corn RhizosphereATTIATTFTNHYVHSHAGSTAFSAPALTHGFQIAFYALAATAALGAVIAVLLIEPQPAEAEREPEADDRQVAVVSQHTPVCRTRGVLAGELQTN*
Ga0070703_1015606413300005406Corn, Switchgrass And Miscanthus RhizosphereSTAFSAPALTHGFQIAFYALAVTAALGAVIAVLLIEPQPAEAEREPEADDRQVALVSQHTPVCRTRGVLAGELQTN*
Ga0070714_10223340613300005435Agricultural SoilTFTNHYVRSHAGISAFSGLALVHGFEIAFYALAGAAAVGAVLAALLIESRPAEVEREPEVDKPRAAVVSQYTPVCQEAN*
Ga0070713_10031225833300005436Corn, Switchgrass And Miscanthus RhizosphereALTHGFQIAFYVLAGTAAVGAVLAALLIESQPAQAEREPEVGESQVAVVSQHTPVCRTRRVLAGHLEAN*
Ga0070713_10135603423300005436Corn, Switchgrass And Miscanthus RhizosphereGFQIAFYALAATAAVGAVIAAVLIEPQRAQAEPEPEADERQVPATSQHTPVCRSRRVLAGELQAN*
Ga0070708_10065717523300005445Corn, Switchgrass And Miscanthus RhizosphereHGFQIAFYVLAATAAVGAALAALLIESQPAQVEREPEVGEPQVAVVSQHTPVCRTRRVLGGQLEAN*
Ga0070708_10096264623300005445Corn, Switchgrass And Miscanthus RhizosphereALTHGFQIAFYVLAATAAVGAVLAGLLIESQPAPAAREPEVGEPHVGVVSQHTPVCRTRGVLAGQLEAN*
Ga0070706_10144696113300005467Corn, Switchgrass And Miscanthus RhizosphereALTHGFEIAFYALAATAAAGAVIAAVLIEPQPTQAEPKHEADERQIAVVSQHTPVCRTPSVLAAQLEAN*
Ga0070698_10070639023300005471Corn, Switchgrass And Miscanthus RhizosphereFTNHYVNSHAGTTALSAPALVHGFQIAFYSLAATAAVGAVIARLLIEPQPSGAEREPEADERQVAVGSQHTPVCRARGVLAGELQAN*
Ga0070695_10063527523300005545Corn, Switchgrass And Miscanthus RhizosphereTHGFQIAFYALAATAAVGAVIAVLLIEPQPAEAEREPEADDRQVAVVSQHTPVCRTRGVLAGELQTN*
Ga0066692_1070600113300005555SoilSAPALVHGFQIAFYSLAATAAVGAVIARLLIEPQPSGAEAEPEADEPQVAVASQHTPVCRAGGVLAGELQAN*
Ga0066700_1110038223300005559SoilFQIAFYALAAAAAVGAVIAALLIEPQPSQAEPEPEADERQVAVVSQHTPVCRARGALAGELQAN*
Ga0068864_10226264123300005618Switchgrass RhizosphereTNHYVHSHAGTTAFSAPALVHGFQIAFYSLAATAAVGAVIARLLIEPQPSGAEPEPQADEPQVAVASQHTPVCHARGVLAGELQAN*
Ga0068862_10033384233300005844Switchgrass RhizospherePALTHGFQIAFYALAATAAAGAVIAAVLIEPQPAQAEPEPDAGERQVPAASQHTPVCRARRVLAGELHAN*
Ga0070715_1065544923300006163Corn, Switchgrass And Miscanthus RhizosphereATTIATTFTSRYVSSHAGTTAFSAPALTHGFQISFYVLAATAAVGAVVARLLIEPQPAKAEREPEADELQVAAVSQYTPVCHETGTGVPAL*
Ga0070716_10057532413300006173Corn, Switchgrass And Miscanthus RhizosphereATTIATTFTNHYVHSHAGTTAFSAPALVHGFQIAFYSLAATAAVGAVIARLLIEPQPSGAEPEPEADEPQVAVASQHTPVCHARGVLAGELQAN*
Ga0070712_10021187913300006175Corn, Switchgrass And Miscanthus RhizosphereAATTIATTFTNHYVHSHAGSTAFSAPALTHGFQIAFYALAVTAALGAVIAVLLIEPQPAEAEREPEADDRQVAVVSQHTPVCRTRGVLAGELQTN*
Ga0070712_10139795113300006175Corn, Switchgrass And Miscanthus RhizosphereGAALTHGFQIAFYALAGTAALGALIAGLLIESQPAQAEQAPDVGESQVAVVSQHTPVCRTRRVLAGHLEAN*
Ga0066665_1071433623300006796SoilYVNSHAGITPLSGAALTHGFQIAFYVLAATAAVGAVIARLLIEPQSSEAEREPQVGEAQVAVVSQHTPVCRARGALAGELQAN*
Ga0079221_1014943623300006804Agricultural SoilGAALTHGFEIAFYVLAATAAVGAVVAALLIEPQSSEAEAEQEVGEPQVAVVSQHTPVCGARHVIAGELEAN*
Ga0075428_10090892023300006844Populus RhizosphereTAFSAPALTHGFQIAFYALAATAAVGALIAAVLIEPQPAQAEPEPEGDDERQVAAASQHTPVCRSRRPLAGELQAN*
Ga0075420_10076589613300006853Populus RhizosphereALTHGFQIAFYVLAATAAVGAALAALLIESQPAQAESEPEVGEPQVAVASQHTPVCRTPDVLAGHLEAN*
Ga0075425_10064745413300006854Populus RhizosphereFQIAFYALAATAAVGAVVAALLIEPRPAEAEREPEAGERQVAVVSQHTPVCRARGVVASQLQAS*
Ga0075425_10224977533300006854Populus RhizosphereATAAVGAVIAALLLESQPAQAEPAPEFGEPQVAVVSQHTPVCRIRGALSSHLEAI*
Ga0075426_1123484713300006903Populus RhizosphereSGPALTHGFQIAFYALAATAAAGAALAALLIEPQPAQAEPEPEVGESQVAVVSQHTPVCRTRGVSVGELEVQAN*
Ga0075424_10030825643300006904Populus RhizosphereVDSHTGISALSGAALTHGFQIAFYVLAATAAVGAVLAALLIESQPAQSEDQPEVGERQVPAVSQHTPVCRTPVAAAARFEAN*
Ga0079219_1120514623300006954Agricultural SoilIAFYALAATAAVGAVIAAVLIEPQPAEAKREPEADERQVPVVSQHTPVCRERGVLAGELQAN*
Ga0066710_10106860713300009012Grasslands SoilSGAALTHGFQIAFYVLAATAAVGAVIARLLIEPQSSEAEREPQVGEAQVAVVSQHTPVCRAPGVLAGELQAN
Ga0099829_1043286923300009038Vadose Zone SoilAATTIATTFTSHYVHSHAGTTAFGGPALTHGFQIAFYVLAATAAAGAVLAALLIESQPAQTEREPEVGEPQVAVVSQHTPVCRTRRVMAGQLEVN*
Ga0099827_1095810213300009090Vadose Zone SoilRHHDRDHLHQPLRALHAGTTAFGGPALTHGFQIAFYVLAAAAAAGAVLASLLIESQPAQAEREPEVGEPQVAVVSQHTPVCRTRRVLAGQLEAN*
Ga0099827_1199891013300009090Vadose Zone SoilHYVHSHAGISAFSGAALTHGFQIAFYVLAATAAVGAALAVLLIESQPAQAEREPEVGEPQVAVVSQHTPVCRTRRVLAGQLEAN*
Ga0066709_10014834353300009137Grasslands SoilFQIAFYVLAATAAVGAVLAAVLIEPQSSEAEREPQVGEAQVAVVSQHTPVCRAPGVLAGELQAN*
Ga0114129_1041710413300009147Populus RhizosphereHYVHSHVGTTAFSGPALTYGFQIAFYALAATAAVGAVIAALLIEPRPAEAEGEPEAGERRVAVVSQHTPVCRTPRVLAGRLEAN*
Ga0075423_1063136233300009162Populus RhizosphereALTHGFQIAFYVLAATAAVGAGLAALLIESQPAQTEDQPEVGERQVPAVSQHTPVCRTPVAAAARFEAN*
Ga0075423_1197340513300009162Populus RhizosphereIGGAVGVAAATTIATTFTNHYMDSHSGISAFSGAALTHGFQIAFYVLAATSAVGAVLAAVLIEPQASEAEHEPDVGESQVAVASQYTPLCHETTTTIPSI*
Ga0105242_1169607023300009176Miscanthus RhizosphereGVAAATTIATTFTSHYVNSHAGATPFSGSALVHGFQIAFYVLAASAAVGAVLAALLIEPQQSRAENEPEVEEQQVAVASQYTPLCPETTVGSAV*
Ga0105242_1274338823300009176Miscanthus RhizosphereSAPALTHGFQIAFYALAATAAVGALIAAVLIEPQRAQAEPDPEAGERQVAAASQHTPVCRTRRVLAAEPQGS*
Ga0126313_1002137613300009840Serpentine SoilTIATTFTNRYVDSHAGISSLSGPALTRGFQIAFYVLAATAAVGAALAALLIESQPAQAEPAPEFGEPQVAVVSQHTPVCRTRGALASHLEAN*
Ga0126314_1149276813300010042Serpentine SoilISALSGPALTHGFQIAFYVLAATAAVGAVLAALLIEPQPAQAAREPEVGEPQVAVVSQHTPVCRTRRVLAGQLEAN*
Ga0134080_1060302013300010333Grasslands SoilNHYVNSHAGTTAFSAPALVHGFQIAFYSLAATAAVGAVIARLLIEPQPAQAAREPEVGEPQVAVVSQHTPVCRTRGVSAGQLEAT*
Ga0134063_1040668223300010335Grasslands SoilVHGFQIAFYSLAATAAVGAVIARLLIEPQPSGAEREPEADERQVAVVSQHTPVCRAPGVLAGELQAN*
Ga0134128_1125772613300010373Terrestrial SoilQIAFYALAATAAVGAVIAAVLIEPQRAEAEPEPEADERQVPATSQHTPVCRSRRVLAGELQAN*
Ga0137388_1122234813300012189Vadose Zone SoilTIATTFTAHYVHSHAGISAFSGAALTHGFQIAFYVLAATAAVGAALAVLLIESQPAQAEREPEVGEPQVAVVSQHTPVCRTRRVFAGHLEAN*
Ga0137382_1018656913300012200Vadose Zone SoilTNHYVHSHAGTSAFSAPALTHGFQIAFYALAATAAVGAVIAAVLIEPQRAQPEPEPEVGERQVAAASQHTPVCRTRRVLAGELQAN*
Ga0137382_1117158113300012200Vadose Zone SoilTAFGAPALTHGFQIAFYALAATAAVGAVVAAVLIEPQRAQAEPQPEADERQVAVVSQHTPVCRAPGVLAGQLEAN*
Ga0137365_1083104523300012201Vadose Zone SoilTTIAITFTNHYVDSHAGTTALSAPALVHGFQVAFYSLAATAAVGAVIARLLIEPQPSGAEREPEADERQVAVVSQHTPVCRARGVLAGELQAN*
Ga0137374_1050491013300012204Vadose Zone SoilQIAFYVLAATAAVGAALAALLIESQPAQAEREPEVGEPQVAVVSQHTPVCRTRRILAGHLEAN*
Ga0137362_1132321223300012205Vadose Zone SoilATTIATTFTNHYVHSHAGIGAFSGPALTHGFQIAFYVLAATAAAGAVLAALLIESQPAQAEREPEVGEPRIAVVSQLTPVCRTSDVSAGLLEAN*
Ga0137376_1159982523300012208Vadose Zone SoilSAPALTHGFQIAFYALAATAAVGAVIARLLIEPQPSGAEREPEADERQVAVVSQHTPVCRARGVLAGELQAN*
Ga0137376_1180647013300012208Vadose Zone SoilHAGTTAFGAPALTHGFQIAFYALAATAAVGAVVAAVLIEPQPAQTEPQPEADERQVAVVSQHTPVCRTRRVLAGDLQAN*
Ga0137378_1104937323300012210Vadose Zone SoilIAFYVLAATAAVGAALAALLIESQPAQADREPEVGEPQVAAVSQHTPVCRPRRVLGGQLEAN*
Ga0137377_1008976013300012211Vadose Zone SoilTTALSAQALVHGFQVAFYSLAATATVGAVIARLLIEPQPSGAERAPEADERQVAVVSQHTPVCRTRRVLAGELEAN*
Ga0137387_1070013313300012349Vadose Zone SoilTTIATTYTSHYLHGHPGVGPLDAAALTHGFQIAFYALAATAAVGAVIAAVLIEPQRAQPEPEPEVGERQVAAASQHTPVCRTRRVLAGELQAN*
Ga0137372_1034908213300012350Vadose Zone SoilVDSHAGIIAFSGAALTHGFQIAFYVLAATAAVGAVLAALLIESQPAQAEREPEVGEPQVAVVSQHTPVCRTRGVSAGQLEAT*
Ga0137367_1012313843300012353Vadose Zone SoilGGAIGVALATTIATTFTLHYVNAHAGETTFSPGALTHGFQIAFYVLAATAAVGAVRAALLIEPQPAQAAREPEVGEPQVAVVSQHTPVCRTRGVSAGQLEAT*
Ga0137366_1085506823300012354Vadose Zone SoilLTHGFEIAFYVLAATAAVGAALAALLIESQPAQAEREPEVGEPQVAVVSQHTPVCRTRRVLAGHLEAN*
Ga0137366_1101026013300012354Vadose Zone SoilDSHAGITAFSGAALTHGFQIAFYVLAATAAVGAVLAALLIESQPAQAEREPEVGEPQVAVVSQHTPVCRTRGVSAGQLEAT*
Ga0137371_1017969813300012356Vadose Zone SoilNHYVHSHAGTSAFSAPALTHGFQIAFYALAATAAVGAVIARLLIEPQPSGAEREPEADERQVAVVSQHTPVCRARGVLAGELQAN*
Ga0137384_1041746113300012357Vadose Zone SoilFQIAFYALVATAAVGAVIAAVLIEPQRAQTEPEPEVGERQVAAASQHTPVCRTRRVLAGELQAN*
Ga0137375_1018319743300012360Vadose Zone SoilGISAFSGAALTHGFQIAFYVLAATAAVGAALAALLIESQPAQAEREPEVGEPRVAVVSQHTPVCRTRRVLAAQLEAN*
Ga0157323_101213413300012495Arabidopsis RhizosphereIATTFTSHYVNSHAGATPFSGSALVHGFQIAFYVLAASAAVGAVLAALLIEPQQSRAENEPEVEEQQVAVASQYTPLCPETTPVGSAA*
Ga0137358_1007528813300012582Vadose Zone SoilATTIAITFTNHYVNSHAGTTAFSAPALVHGFQIAFYSLAATAAVGAVIARLLIEPQPSGAEPEPEADEPQVAVASQHTPVCRAGGVLAGELRAN*
Ga0137396_1078268113300012918Vadose Zone SoilIATTIATTYTSHYLHGHPGVGSLDGAALTHGFQIAFYALAATAAAGAVLAALLIEPQPAEAERQPEVGQPRVAVVSQHTPVCRTPRVLGGQLEAN*
Ga0137394_1022833913300012922Vadose Zone SoilIATTFTNHYVHSHSGISALGGPALTHGFQIAFYALAATAAAGAVLAALLIEPQPAEAERQPEVGQPRVAVVSQHTPVCRTRDVSAGLLEAN*
Ga0137407_1129480713300012930Vadose Zone SoilHAGTSAFSAPALTHGFQIAFYALAATAAVGAVIAAVLIEPQRAQPEPEPEVGERQVAAASQHTPVCRTRRVLAGELQAN*
Ga0164307_1179738323300012987SoilFTNRYVHSHAGSTAFSGPALTHGFQIAFYALAATAAVGAVIAAVLIEPQRAQAEPEPEADERQVPATSQHTPVCRSRRVLAGELQAN*
Ga0163162_1006490013300013306Switchgrass RhizosphereATTFTSHYVHSHAGTTAFSAPALTHGFQIAFYALAATAALGAVIAAVLIEPQTAQAEPKPEVDERQVAVVTQHAPVCRARGVLAGELQAN*
Ga0137405_102779633300015053Vadose Zone SoilFTNHYVHSHAGTSAFSAPALTHGFQIAFYALAATAAVGAVIARLLIEPQPSGAEREPEADERQVAVVSQHTPVCRARGVLAGELQAN*
Ga0132258_1350655413300015371Arabidopsis RhizosphereTMATTFTSRYVSSHAGTTAFSAPALTHGFQISFYVLAATAAVGAVVARLLIQPQPAKAEREPEADELQVAAVSQYTPVCHETGTGVPAL*
Ga0132256_10171457223300015372Arabidopsis RhizosphereYVHSHAGVTAFSAPALTHGFQIAFYALAATAAVGAVIAAVLIEPQPAQPEPEPEADEGQIAVVSQHTPVCRTPGVLV*
Ga0132257_10045628013300015373Arabidopsis RhizosphereATTIATTFTNHYVSSHAGATPFSGPALVHGFQIAFYVLAATAALGAVVAALLIEPQPSVAEAEPKGHEPQVAVASQYTPLCPETTTAGSAA*
Ga0132257_10218020413300015373Arabidopsis RhizosphereYVNSHSGATPFSGPALVHGFQIAFYVLAASAAVGAVLAALLIEPQQSRAENEPEVEEQQVAVASQYTPLCPETTPVGSAA*
Ga0066667_1149774823300018433Grasslands SoilALAATAAVGAALAALLIEPQPAQVEHEPEAGEPQVAVVSQHTPVCRTGGASAAQLEAN
Ga0066662_1055270333300018468Grasslands SoilAITFTDHYVNSHPGTTALSAPALVHGFQIAFYSLAATAAVGAVIARLLLEPHPSGAEREPEADERQVAVVSQHTPVCRARGVLAGELQAN
Ga0193719_1043883413300021344SoilSGAALTHGFQIAFYVLAATAAAGAVLAALLIESQPAQAEREPEVGEPQVAVVSQHTPVCRTRRVLAGHLEAN
Ga0193699_1046356523300021363SoilATTFTAHYVDSHAGVSAFSGAALTHGFQIAFYFLAATAAVGAALAALLIESQPAQAEREPEVGERQVAVSSQHTPVCRTRRVLAGQFEAN
Ga0207662_1027788133300025918Switchgrass RhizosphereAFSGPALTHGFQIAFYALAATAAAGAVIAAVLIEPQPAQAEPEPDAGERQVPAASQHTPVCRARRVLAGELHAN
Ga0207646_1045685733300025922Corn, Switchgrass And Miscanthus RhizosphereLTHGFGIAFYVLAATAAVGAVLAALLIESQPAQAEREPEVGEPQVGVVSQHTPVCRPRSVLAGHLEAN
Ga0207694_1179047223300025924Corn RhizosphereQIAFYALAATAAAGAVIAAVLIEPQPAQAEPEPDAGERQVPAASQHTPVCRARRVLAGELHAN
Ga0207687_1093757623300025927Miscanthus RhizosphereVLAGTAAVGAVLAALLIESQPAQAEREPEVGESQVAVVSQHTPVCRTRRVLAGHLEAN
Ga0207664_1143698923300025929Agricultural SoilAAATTIATTFTNHYVRSHAGISAFSGLALVHGFEIAFYALAGAAAVGAVLAALLIESRPAEVEREPEVDKPRAAVVSQYTPVCQEAN
Ga0207644_1059020713300025931Switchgrass RhizosphereYVHSHAGSTPFSGPALTHGFQIAFYALAATAAVGAVIAAVLIEPQRAEAEPEPEADERQVPATSQHTPVCRSRRVLAGELQAN
Ga0207709_1044050913300025935Miscanthus RhizosphereIGVAAATTIATTFTSHYVNSHAGATPFSGSALVHGFQIAFYVLAASAAVGAVLAALLIEPQQSRAENEPEVEEQQVAVASQYTPLCPETTPVGSAA
Ga0207665_1152581323300025939Corn, Switchgrass And Miscanthus RhizosphereTHGFQIAFYVLAGTAAVGAVLAALLIESQPAQAEREPEVGESQVAVVSQHTPVCRTRRVLAGHLEAN
Ga0207711_1039108513300025941Switchgrass RhizosphereALTHGFQIAFYALAATAAAGAVIAAVLIEPQPAQAEPEPDAGERQVPAASQHTPVCRARRVLAGELHAN
Ga0207689_1012239043300025942Miscanthus RhizosphereGPALTHGFQIAFYALAATAAAGAVIAAVLIEPQPAEAEPEPDAGERQVPAASQHTPVCRARRVLAGELHAN
Ga0207683_1094661513300026121Miscanthus RhizosphereGVALATTIATTYTSHYVVGHPGVAPLDGAALNHGFQIAFYVLAATAAVGAVLAALLIEPQPAQAEREPEIADPQVAVVSQHTPVCRSRAVLASHLEVR
Ga0179587_1066382823300026557Vadose Zone SoilSGPALTHGFQIAFYVLAATAAAGAVLAALLIESQPAQAEREPEVGKPRVAVVSQHTPVCRTSDVSAALLEAN
Ga0209388_121957723300027655Vadose Zone SoilALTHGFQIAFYVLAATAAAGAVLAALLIESQPAQAEREPEVGEPQVAVVSQHTPVCRTRRVLGGQLEAN
Ga0209180_1025430523300027846Vadose Zone SoilLAATAAAGAVLAALLIESQPAQTEREPEVGEPQVAVVSQHTPVCRTRRVMAGQLEVN
Ga0209481_1051862023300027880Populus RhizosphereAIGVAAATTIATTFTNHYVDSHDGTTAFSPPALVHGFQIAFYCLAATAAVGAVIARLLIRPQPSVAEPEPEADEPQVAVASQHTPVCHGRGVLAGELQPN
Ga0207428_1109544513300027907Populus RhizosphereTNHYVDSHAGTSAFSPPALTHGFQIAFYALAATAAVGAVIAAVLIEPQRAQTEPEPEAGERQVAAASQHTPVCRTRPVLAGELQAN
Ga0268264_1029231733300028381Switchgrass RhizosphereIATTFTNRYVHSHPGATAFSGPALTHGFQIAFYALAATAAAGAVIAAVLIEPQPTQAEPEPDAGERQVPAASQHTPVCRARRVLAGELHAN
Ga0307280_1018576023300028768SoilATTIATTFTNRYVHSHAGSTAFSAPALTHGFQIAFYALAATAAVGAVIAVLLIEPQPAEAEREPEADDRQVAVVSQHTPVCRTRGVLAGELQTN
Ga0307287_1036061213300028796SoilIATTFTNHYVHSHAGSTAFSAPALTHGFQIAFYALAATAAVGAVIAVLLIEPQPAEAEREPEADDRQVAVVSQHTPVCRTRGVLAGELQTN
Ga0307312_1107843213300028828SoilGTTAFSAPALTHGFQIAFYALAGTAAVGAVIAAVLIEPQRAEAEPEPEAGERQVAAASQHTPVCRTRRVLAGELQAN
Ga0307289_1024380323300028875SoilFYALAATAAVGAAIAAVLIEPQRAQAEPEPEAGERQVAVVSQHTPVCRTRGVLAGELQAN
Ga0307304_1043636113300028885SoilIAFYSLAATAAVGAVIARLLIEPQPSGAEREPEADERQVAVVSQHTPVCRAPGVLAGELQAN
Ga0307469_1183162013300031720Hardwood Forest SoilTTFTNHYVRAHAGSTPFSGPALTHGFEIAFYALAATAAVGAVLAPLLIESQPAQPAREPEVGDSQVAVVSQHTPLCRIRPVLAGQTEAH
Ga0307469_1220333913300031720Hardwood Forest SoilHAGTTAFSAPALTHGFEIAFYALAATAAVGAVIAAVLIEPQPAQVEPKPEADERQVPATSQHTPVCRTRRALAGELQAN
Ga0307475_1131765923300031754Hardwood Forest SoilIATTFTNHYVHSHIGTNAFSGPALTHGFQFAFYVLAGTAAVGAVLAALLIESQPAQAEREPGLGERKVAVVSQHTPVCRRGDVSAALLEAN
Ga0310897_1036485113300032003SoilFSAPALTHGFQIAFYALAATAAVGAVIAAVLIEPQPAQAEPEPEGDDERQVAAASQHTPVCRSRRPLAGELQAN
Ga0307470_1154021213300032174Hardwood Forest SoilTNHYVHSHAGTSAFSAPALTHGFQIAFYALAATAAVGAVIAALLIEPQPSEAEREPDAGERQVAVVSQYTPVCHETTTRIPALSGGSR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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