Metagenome / Metatranscriptome Family F084789

Basic Information
Family ID	F084789
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	69 residues
Representative Sequence	MSEGHQPRICRQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWRKAAQRPD
Number of Associated Samples	74
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	8.18 %
% of genes near scaffold ends (potentially truncated)	45.54 %
% of genes from short scaffolds (< 2000 bps)	94.64 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Unclassified (71.429 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.214 % of family members)
Environment Ontology (ENVO)	Unclassified (32.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.857 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.39% β-sheet: 19.39% Coil/Unstructured: 61.22%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF07043	DUF1328	4.46
PF01381	HTH_3	2.68
PF00571	CBS	1.79
PF03734	YkuD	1.79
PF04519	Bactofilin	1.79
PF04226	Transgly_assoc	0.89
PF13519	VWA_2	0.89
PF05368	NmrA	0.89
PF04828	GFA	0.89
PF00578	AhpC-TSA	0.89
PF13405	EF-hand_6	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	4.46
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.79
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.79
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.79
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.89
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
All Organisms	root	All Organisms	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
cellular organisms	root	All Organisms → cellular organisms	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.82 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.68 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.68 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1008478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1717	Open in IMG/M
3300000787\|JGI11643J11755_11781524	Not Available	554	Open in IMG/M
3300000891\|JGI10214J12806_10591615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	898	Open in IMG/M
3300000956\|JGI10216J12902_113629255	Not Available	631	Open in IMG/M
3300002099\|JGI24808J26613_1028533	Not Available	818	Open in IMG/M
3300004114\|Ga0062593_101034260	Not Available	846	Open in IMG/M
3300004114\|Ga0062593_103443013	Not Available	508	Open in IMG/M
3300004114\|Ga0062593_103569406	Not Available	500	Open in IMG/M
3300004157\|Ga0062590_101884708	Not Available	616	Open in IMG/M
3300004479\|Ga0062595_100487734	Not Available	920	Open in IMG/M
3300004480\|Ga0062592_100951310	Not Available	780	Open in IMG/M
3300004633\|Ga0066395_10534565	Not Available	680	Open in IMG/M
3300005330\|Ga0070690_100304541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1143	Open in IMG/M
3300005332\|Ga0066388_100537588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1800	Open in IMG/M
3300005332\|Ga0066388_100921730	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300005332\|Ga0066388_101283687	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300005332\|Ga0066388_101764635	Not Available	1098	Open in IMG/M
3300005332\|Ga0066388_102021628	Not Available	1034	Open in IMG/M
3300005332\|Ga0066388_104036982	Not Available	748	Open in IMG/M
3300005332\|Ga0066388_104918150	Not Available	679	Open in IMG/M
3300005332\|Ga0066388_106364432	Not Available	596	Open in IMG/M
3300005332\|Ga0066388_106582591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	585	Open in IMG/M
3300005335\|Ga0070666_10631304	Not Available	783	Open in IMG/M
3300005347\|Ga0070668_100113095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2162	Open in IMG/M
3300005355\|Ga0070671_101939343	Not Available	524	Open in IMG/M
3300005356\|Ga0070674_101862816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	546	Open in IMG/M
3300005536\|Ga0070697_100737500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	870	Open in IMG/M
3300005563\|Ga0068855_100120890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2997	Open in IMG/M
3300005713\|Ga0066905_100467963	Not Available	1040	Open in IMG/M
3300005764\|Ga0066903_102096186	Not Available	1088	Open in IMG/M
3300005764\|Ga0066903_102108779	Not Available	1085	Open in IMG/M
3300005764\|Ga0066903_102187400	Not Available	1066	Open in IMG/M
3300005764\|Ga0066903_102257482	Not Available	1050	Open in IMG/M
3300005764\|Ga0066903_103827487	Not Available	808	Open in IMG/M
3300005764\|Ga0066903_104644691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300005764\|Ga0066903_104946201	Not Available	707	Open in IMG/M
3300005764\|Ga0066903_105012100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	702	Open in IMG/M
3300005764\|Ga0066903_105343879	Not Available	678	Open in IMG/M
3300005764\|Ga0066903_105385412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	676	Open in IMG/M
3300005764\|Ga0066903_106302688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	619	Open in IMG/M
3300005764\|Ga0066903_106493385	Not Available	609	Open in IMG/M
3300005764\|Ga0066903_106528504	Not Available	608	Open in IMG/M
3300005983\|Ga0081540_1059758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1828	Open in IMG/M
3300006163\|Ga0070715_10217157	Not Available	981	Open in IMG/M
3300006175\|Ga0070712_100488445	Not Available	1031	Open in IMG/M
3300006196\|Ga0075422_10502272	Not Available	550	Open in IMG/M
3300006852\|Ga0075433_10392440	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300006852\|Ga0075433_11209062	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300006854\|Ga0075425_100168686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2512	Open in IMG/M
3300006903\|Ga0075426_11462335	Not Available	519	Open in IMG/M
3300006914\|Ga0075436_101262988	Not Available	558	Open in IMG/M
3300006954\|Ga0079219_10121396	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300009094\|Ga0111539_10036291	All Organisms → cellular organisms → Bacteria	5962	Open in IMG/M
3300009094\|Ga0111539_10919561	Not Available	1017	Open in IMG/M
3300009147\|Ga0114129_11637564	Not Available	787	Open in IMG/M
3300009156\|Ga0111538_12024556	Not Available	724	Open in IMG/M
3300009792\|Ga0126374_11777407	Not Available	515	Open in IMG/M
3300010358\|Ga0126370_10294281	Not Available	1284	Open in IMG/M
3300010358\|Ga0126370_11236001	Not Available	696	Open in IMG/M
3300010361\|Ga0126378_13213644	Not Available	520	Open in IMG/M
3300010362\|Ga0126377_11459111	Not Available	757	Open in IMG/M
3300010373\|Ga0134128_12181770	Not Available	610	Open in IMG/M
3300010376\|Ga0126381_102192477	Not Available	795	Open in IMG/M
3300010376\|Ga0126381_103087474	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300010398\|Ga0126383_12937202	Not Available	557	Open in IMG/M
3300010403\|Ga0134123_10493920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1150	Open in IMG/M
3300014969\|Ga0157376_11179599	Not Available	793	Open in IMG/M
3300015373\|Ga0132257_103145487	Not Available	601	Open in IMG/M
3300015374\|Ga0132255_101819539	Not Available	925	Open in IMG/M
3300016294\|Ga0182041_10771558	Not Available	857	Open in IMG/M
3300016319\|Ga0182033_11079049	Not Available	716	Open in IMG/M
3300016341\|Ga0182035_10900448	Not Available	780	Open in IMG/M
3300016341\|Ga0182035_11813272	Not Available	552	Open in IMG/M
3300016357\|Ga0182032_11387931	Not Available	608	Open in IMG/M
3300016371\|Ga0182034_11796389	Not Available	540	Open in IMG/M
3300016387\|Ga0182040_10218227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1414	Open in IMG/M
3300016387\|Ga0182040_10417657	Not Available	1056	Open in IMG/M
3300016404\|Ga0182037_10614593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	923	Open in IMG/M
3300016422\|Ga0182039_11047523	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300016422\|Ga0182039_11199292	Not Available	686	Open in IMG/M
3300020080\|Ga0206350_10991809	Not Available	862	Open in IMG/M
3300021560\|Ga0126371_13807118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300021560\|Ga0126371_13902709	Not Available	502	Open in IMG/M
3300022915\|Ga0247790_10226647	Not Available	503	Open in IMG/M
3300025945\|Ga0207679_11873601	Not Available	547	Open in IMG/M
3300025949\|Ga0207667_11889668	Not Available	559	Open in IMG/M
3300031543\|Ga0318516_10374541	Not Available	821	Open in IMG/M
3300031545\|Ga0318541_10826906	Not Available	517	Open in IMG/M
3300031736\|Ga0318501_10799800	Not Available	522	Open in IMG/M
3300031879\|Ga0306919_10680396	Not Available	793	Open in IMG/M
3300031879\|Ga0306919_10825739	Not Available	712	Open in IMG/M
3300031890\|Ga0306925_11853197	Not Available	575	Open in IMG/M
3300031910\|Ga0306923_11079391	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300031910\|Ga0306923_12069483	Not Available	575	Open in IMG/M
3300031912\|Ga0306921_11371674	Not Available	779	Open in IMG/M
3300031945\|Ga0310913_10159023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1565	Open in IMG/M
3300031946\|Ga0310910_10360604	Not Available	1149	Open in IMG/M
3300031946\|Ga0310910_11353604	Not Available	549	Open in IMG/M
3300031947\|Ga0310909_10285060	Not Available	1383	Open in IMG/M
3300031954\|Ga0306926_10320400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1918	Open in IMG/M
3300031959\|Ga0318530_10441164	Not Available	540	Open in IMG/M
3300032001\|Ga0306922_11187954	Not Available	777	Open in IMG/M
3300032001\|Ga0306922_11419095	Not Available	697	Open in IMG/M
3300032035\|Ga0310911_10738381	Not Available	570	Open in IMG/M
3300032076\|Ga0306924_10841124	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300032076\|Ga0306924_12417464	Not Available	529	Open in IMG/M
3300032261\|Ga0306920_100573192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1671	Open in IMG/M
3300032261\|Ga0306920_102078026	Not Available	793	Open in IMG/M
3300032261\|Ga0306920_103530589	Not Available	577	Open in IMG/M
3300033289\|Ga0310914_10852122	Not Available	810	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.25%
Host-Associated	Host-Associated	18.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.25%
Plants	Host-Associated → Plants	18.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.25%
Loam	Environmental → Terrestrial → Soil → Loam	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	21.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10084781	3300000579	Forest Soil	IENLLSVELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSEDDIAALKGMVTRWTKAAQRRER*
JGI11643J11755_117815242	3300000787	Soil	MSDACQPGICSQCDLPLIELDAYGERLCGCVGCNNWQSLESGQWLQLPDEDITALKGMVGRWTKAAQQG*
JGI10214J12806_105916153	3300000891	Soil	QPGICCQCDLPLIELDACGERLYGCVGCNTWQALDSGEWRHLPDADIAALSGMVARWTKEAQR*
JGI10216J12902_1136292551	3300000956	Soil	MSEERQPRICRHCNLPLIELDAYGERLCECVGCNNWQSLESGQWLQLPDEDITALKGMVGRWTKAAAK*
JGI24808J26613_10285332	3300002099	Soil	MSEERQTRICSKCDLPLIELEAYGERLRGCVGCNNWQALESGEWCHLSQADITALSDMVARWTEAAQQRER*
Ga0062593_1010342602	3300004114	Soil	MSEQHQSRTCFQCELPLIELDAYGERLCGCVGCNNWQALESGEWCHLSDDDITALKGMVGRWTKAAQTGMKSQT*
Ga0062593_1034430131	3300004114	Soil	MSEEHQPRICSHCNLPLIELDAYGERLCGCVGCNIWQSLDSRGWRHLPDDDIAALSGMDAMDRSGAED*
Ga0062593_1035694062	3300004114	Soil	MSEERQPRICSHCNLPLIELEAYGERLCGCVGCNNWQALDSGGRRHLPDDDIAALTGMVTRWTKAARRGLGGASGQGSS*
Ga0062590_1018847081	3300004157	Soil	MSEEPQPRICSHCNLPLIELDAYGERLCGCVGCNNWQSLESGEWRQLPDEDIVALKGMVGRWTKAAAK*
Ga0062595_1004877341	3300004479	Soil	MSEERQPKICCQCDSVLIELDAYGERLCGCAGCNIWQSLESGEWRHLSDDDIAALRGMV
Ga0062592_1009513101	3300004480	Soil	MSEEPQPRICSHCNLPLIELDAYGERLCGCVGCNNWQSLESGEWRQLPDEDIIALKGMVGRWIKEAQRN*
Ga0066395_105345651	3300004633	Tropical Forest Soil	MSEGQQPKICRQCELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVMRWRKAAQRPAP*
Ga0070690_1003045414	3300005330	Switchgrass Rhizosphere	MSEQHQSRTCFQCELPLIELDAYGERLCGCVGCNNWQALESGEWCHLSDDDITALKGMVGRWTKAAQTGMNSQT*
Ga0066388_1005375882	3300005332	Tropical Forest Soil	MSEAHQPRICFECELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDIAALKGMVTRWREAAQRPDP*
Ga0066388_1009217303	3300005332	Tropical Forest Soil	VKVSVEHQPSICSQCDSALIELEAYGERLCGCVECNNWQSFNSGEWRHLPNDDIDALRGMVRRWMEAAMRPNR*
Ga0066388_1012836874	3300005332	Tropical Forest Soil	VVVRSHAARGLCSEFVEMSEGHQPRICCECELPLIELDACGERLCGCVGCNNWQALDSGEWLHLSEDDIAALKGMVTRWTKAAQRSDP*
Ga0066388_1017646352	3300005332	Tropical Forest Soil	LQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITVLKGMVTRWTKKAKRDDP*
Ga0066388_1020216285	3300005332	Tropical Forest Soil	MSEERQPRICSHCNLPLIELGAYGERLCGCVGCNNWQSLESKEWRQLPGKDIIALKGMVGRWTK
Ga0066388_1040369821	3300005332	Tropical Forest Soil	MSEAQQPRICCQCDLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDIAALKGMVTRWRKAAQRPDP*
Ga0066388_1049181501	3300005332	Tropical Forest Soil	MSEERQPTICYQCDLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLPDDDITALRGMAARWTQEADRTAVKR*
Ga0066388_1063644322	3300005332	Tropical Forest Soil	MGYFVMSEAQQPRICCQCDLPLIELDAYGERLCGCVGCNNWQVLDSGEWRHLTDDDLTALKGMVTRWTQEADRTTLKR*
Ga0066388_1065825911	3300005332	Tropical Forest Soil	MSEQPKICRQCKLSLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDLTALKGMVTRWRKAAQRPDP*
Ga0070666_106313043	3300005335	Switchgrass Rhizosphere	MSEQHQSRTCFQCELPLIELDAYGERLCGCVGCNNWQALESGEWCHLSDDDITELKGMVGRWTKAAQTGMNSQT*
Ga0070668_1001130955	3300005347	Switchgrass Rhizosphere	MSDACQPGICSQCDLPLIELDAYGERLCGCVGCNNWQALESGEWHHLSDDDIIALKG
Ga0070671_1019393432	3300005355	Switchgrass Rhizosphere	MSEQHQSRACFQCELPLIELDAYGERLCGCVGCNNWQALESGEWCHLSDDDITALKGMVGRWTKAAQTGMKSQT*
Ga0070674_1018628162	3300005356	Miscanthus Rhizosphere	CSQCDLPLIELDAYGERLCGCVGCNNWQALESGEWHHLSDDDIIALKGMVRRWTEAARPKR*
Ga0070697_1007375002	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSDACQPGICSQCDLPLIELDAYGERLCGCVGCNNWQALESGEWHHLSDDDIIALKGMVRRWTEAAERPKR*
Ga0068855_1001208905	3300005563	Corn Rhizosphere	MSDACQPGICSQCDLPLIELDAYGERLCGCVGCNNWQALESGEWHHLSDDDIIALKGMVRRWTEAARPKR*
Ga0066905_1004679632	3300005713	Tropical Forest Soil	MSEAQQPRICCQCDLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDIAALKGMVTRWRKAAQPPEP*
Ga0066903_1020961862	3300005764	Tropical Forest Soil	MSEECQPKICRQCKLPLIELDAYGERLCGCVGCNNWQALVSGEWRHLSDDDITALKGMVTRWTKKAKRNDP*
Ga0066903_1021087794	3300005764	Tropical Forest Soil	MSEGTQPKICLQCELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDIIALKGMVTRWTQEADRTAVKR*
Ga0066903_1021874001	3300005764	Tropical Forest Soil	MNEEHEPRICSQCDLPLIELDAYGERLCGCVGCNNWHALDSGEWRHLPKHDIAALRGMVGRWTEAARRKANSEQEK*
Ga0066903_1022574823	3300005764	Tropical Forest Soil	MSEGHQPRICRQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWTKVAKRDDP*
Ga0066903_1038274873	3300005764	Tropical Forest Soil	MSEGHQPRICCECELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWRKAAQR
Ga0066903_1046446912	3300005764	Tropical Forest Soil	VKMSEAQQPRICSECELPLIELDAYGERLCGCVGCNNWQAIGSGEWRHLSDDDITALKGMVTRWRKAAQRGDP*
Ga0066903_1049462011	3300005764	Tropical Forest Soil	MSEGQQPKICRQCELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVMRWRKAAQRPDP*
Ga0066903_1050121002	3300005764	Tropical Forest Soil	MSEQPKICRQCELPLIELDAYGERLCGCVGCNNWQVLDSGEWRHLSDDDIAALKGMVTRWRKAAQRHDP*
Ga0066903_1053438792	3300005764	Tropical Forest Soil	MSEQPKICRQCELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWRKAAKRPDP*
Ga0066903_1053854121	3300005764	Tropical Forest Soil	MSEERQPGFCSQCELPLIELDAYGERLCGCVGCNNWQALDSGEWRRLSDDDLTALKGMVTRWT
Ga0066903_1063026882	3300005764	Tropical Forest Soil	MSEEHQPRICLQCELPLIELDAYGERLCGCVGCNNWQALVSGEWRHLSDDDITALKGMVRRWTQEAERTAVKR*
Ga0066903_1064933852	3300005764	Tropical Forest Soil	MSEAQQPRICCQCDLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLPDDDITALRGMAARWTQEADRTAVKR*
Ga0066903_1065285041	3300005764	Tropical Forest Soil	MSEEHQPRICCQCDLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDLTALRGMAARWTQEADRTAVSDD
Ga0081540_10597584	3300005983	Tabebuia Heterophylla Rhizosphere	MSEERQSRICCQCDLPLIELDAYRERLCGCVGCNNWQALDSGEWRHLPDDDITALRGMAARWRKVAQRPDP*
Ga0070715_102171572	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSEERQSRTCCQCELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDVAALCGMVTRWTKA
Ga0070712_1004884452	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VKTDNRELGQCELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSEDDIAALKGMVTRWTKAAQGRER*
Ga0075422_105022721	3300006196	Populus Rhizosphere	MSEEHQPKICCQCELPLIELDAYGEPVRLSGCNNWQALDSGEWRHLPEADIAALSGMVTRWTKEAQRRDQ*
Ga0075433_103924403	3300006852	Populus Rhizosphere	VEMSVGPRICSHCNLPLIELDAYGERLCGCVDCNNWQALDSGEWHHLSDDDIIALKAMVRRWTEAAERPK*
Ga0075433_112090621	3300006852	Populus Rhizosphere	MSEERQPKICCQCDSVLIELDAYGERLCGCAGCNIWQSLESGEWRHLSDDDIAALRGMVMRWTEAAKRHER*
Ga0075425_1001686862	3300006854	Populus Rhizosphere	MTEEHQPRICCQCELPLIELDAHGERLCGCVGCNNWQALDSGEWHHLPDDDIWVLRDMVARWTKAAQRRER*
Ga0075426_114623352	3300006903	Populus Rhizosphere	MSEERQPKICCQCDSVLIELDAYGERLCGCAGCNIWQSLESGEWRHLSDDDIAALRGMVMRWT*
Ga0075436_1012629882	3300006914	Populus Rhizosphere	MSEQPQPRICRLCDFPLIELDAYGERLCGCVACNNWQSLHHLSDDDIIALKGMVKRWTEAAERHNH*
Ga0079219_101213962	3300006954	Agricultural Soil	MSEERQPKICCQCDSVLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDIAALKGMVTRWRKAAQPPEP*
Ga0111539_100362913	3300009094	Populus Rhizosphere	MSEERQPKICCQCDSVLIELDAYGERLCGCAGCNIWQSLESGEWRHLSDDDIAALRGMVMRRTEAAKRHER*
Ga0111539_109195611	3300009094	Populus Rhizosphere	MSEEPQPRICSHCNLPLIELDAYGERLCGCVGCNNWQSLESGEWRQLPDEDIIALKGMVRRWTKAAQTG
Ga0114129_116375642	3300009147	Populus Rhizosphere	MSEQPQPRICRLCDFPLIELDAYGERLCGCVACNNWQSLEPGEWHHLSDDDIIALKGMVKRWTEAAERHNH*
Ga0111538_120245561	3300009156	Populus Rhizosphere	MSEERQQRICSHCNLPLIELEAYGERLCGCVGCNNWQALDSGERRHLPDEDITALKGMVGRWTKAAQG*
Ga0126374_117774071	3300009792	Tropical Forest Soil	MSEERQSRTCCQCELPLIELDAYGERLCGCVGCNNWQALESGEWRHLSEDDIAALKGMVTRWTKAAQ
Ga0126370_102942811	3300010358	Tropical Forest Soil	MSEAQQPRICCQRDLPLIELDAYGERLCGCVGCNNWQALASGEWRHLPDDDITALRGMAARWRKAAQRPDP*
Ga0126370_112360011	3300010358	Tropical Forest Soil	MSEAQQPRICSECELPLIELDAYGERLRGCVGRNNWQAIGSGEWRHLSDDDITALKGMVTRWRKAAQRGDP*
Ga0126378_132136441	3300010361	Tropical Forest Soil	EAQQPRICLECELSLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDLTALKGMVTRWTQEADRTAVK*
Ga0126377_114591111	3300010362	Tropical Forest Soil	MNEEHQPRICSQCDLPLIELDAYGGRLCGCVGCNNWQALDSGEWRHLSDEDIAALKGMVTRWRKAA
Ga0134128_121817701	3300010373	Terrestrial Soil	MSEERQPKICCQCDSVLIELDAYGERLCGCVGCNNWQALDSGEWRHLPDDDITALRGMVTRWTKAAQRRER*
Ga0126381_1021924772	3300010376	Tropical Forest Soil	MSEAQQPRICCECELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDIAALKGMVTRWRKAA
Ga0126381_1030874742	3300010376	Tropical Forest Soil	MSEAQQPRICSECELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWRKAAQRGDP*
Ga0134124_111840001	3300010397	Terrestrial Soil	NLPLIELEAYGERLCGCVGCNNWQSLDSGEWRQLPDEDIIALKGMVRRWTKAAQTGMKSQT*
Ga0126383_129372021	3300010398	Tropical Forest Soil	MSEDPQPRICCECELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWTKQVKRDDP*
Ga0134123_104939203	3300010403	Terrestrial Soil	ACQPGICSQCDLPLIELDAYGERLCGCVGCNNWQALESGEWHHLSDDDIIALKGMVRRWTEAARPKR*
Ga0157376_111795991	3300014969	Miscanthus Rhizosphere	SGILRLLEIIFGYVVGMSEVRQPRICCQCELSLIELDAYGERLCGCVGCNNWQALESGEWCHLSDDDITALKGMVGRWTKAAQTGMKSQT*
Ga0132257_1031454871	3300015373	Arabidopsis Rhizosphere	QCDLPLIELDAYGERICGCVGCNNWQGLDSGEWRHLSDDDIAALKGMVGRWTEAAQRKANSEQDK*
Ga0132255_1018195392	3300015374	Arabidopsis Rhizosphere	MSEQPQPRICRLCDFPLIELDAYGERLCGCLACNNWQSLEPGEWHHLSDDDIIALKGMVKRWTEAAERHNH*
Ga0182041_107715581	3300016294	Soil	MSEKHQPRICGHCDMPLIELEAYGERLCGCVGCNNWQALDSGEWCHLPDDDIAALKGM
Ga0182033_110790491	3300016319	Soil	VEMSEGHQPRICRQCKLPLIELDAYGERLCGCVGCNNWQALVSGEWRHLSDDDIAALKGMVTRWTKVVKRDDP
Ga0182033_112251921	3300016319	Soil	MGHQPKICRQCKLPLIELDAYGESLCGCVGCNNWQALESGEWRHLSDDDIAALKG
Ga0182035_109004481	3300016341	Soil	MSEGHQPRICRQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWRKAAQRPD
Ga0182035_118132722	3300016341	Soil	MSEGHQPKICRQCKLPLIELDAYGERLCGCVGCNNWQALVSGEWRHLSDDDITALKGMVTRWTNK
Ga0182032_113879311	3300016357	Soil	MSEAQQPRICCQCDLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDLTALKGMVTRWRKAAQ
Ga0182034_117963892	3300016371	Soil	CKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWTNKAKRDDP
Ga0182040_102182274	3300016387	Soil	VSEGHQPKICLQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLPDDDVTALRGMAARWTQEADR
Ga0182040_104176573	3300016387	Soil	MGSQCDLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWTKVVKR
Ga0182037_106145931	3300016404	Soil	MSEGHQPKICRQCKLPLIELDAYGERLCGCVGCNNWQALVSGEWRHLPDDDITALRGMAARWR
Ga0182039_110475231	3300016422	Soil	VRDTSREFVCSVNLPLLELDAYGERLCGCVDCNNWQALDSGEWRHLSDYDITALKGMVTRWTKK
Ga0182039_111992921	3300016422	Soil	CRQCKLPLIELDAYGERLCGCVGCNNWQALNSGEWRHLSDDDLTALKGMVTRWTKEAKRDDP
Ga0206350_109918091	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	LAGMSEQHQSRNCFQCELPLIELDAYGERLCGCVGCNNWQALESGEWCHLSDDDITALKGMVGRWTKAAQTGMNSQT
Ga0126371_138071182	3300021560	Tropical Forest Soil	MSEGHPPKICRQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLTDVDITALKGMVTRWRKAAQ
Ga0126371_139027092	3300021560	Tropical Forest Soil	FVEMSEGTQPKICRQCDLPLIELDAYGERLCGCVGCNNWQAIGSGEWRHLSDDDLTALKGMVTRWTKKAKRDDP
Ga0247790_102266472	3300022915	Soil	QHQSRTCFQCELPLIELDAYGERLCGCVGCNNWQALESGEWCHLSDDDITALKGMVGRWTKAAQTGMKSQT
Ga0207679_118736012	3300025945	Corn Rhizosphere	MSEQHQSRACFQCELPLIELDAYGERLCGCVGCNNWQALESGEWCHLSDDDITALKGMVGRWTKAAQTGMKSQT
Ga0207667_118896681	3300025949	Corn Rhizosphere	MSEQHQSRTCFQCELPLIELDAYGERLCGCVGCNNWQALESGEWCHLSDDDITALKGMVGRW
Ga0318516_103745412	3300031543	Soil	MSEAQKPRICCQCDLPLIELDAYGERLRGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWREAAQRPDP
Ga0318541_108269061	3300031545	Soil	ICRQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDGDITALKGMVTRWTNKAKRDDP
Ga0318501_107998001	3300031736	Soil	MSEERQPRICSQCDLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDIAALKGMVTRWRKAAQRPDP
Ga0306919_106803961	3300031879	Soil	MGEERQPRICRQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDGDITALKGMVTRWTNKA
Ga0306919_108257392	3300031879	Soil	MGSQCDLPLIELDACRERLCGCVGCNNWQALDSGEWRHLSDDDIAALKGMVTRWTKGAK
Ga0306925_118531971	3300031890	Soil	MGEERQPRICRQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDGDITALKGMVTRWTNKAKRDDP
Ga0306923_110793911	3300031910	Soil	MSEAHQPRICLQCKLPLIELDAYGERLSGCVGCNNWQALESGEWRHLSDDDITALKGM
Ga0306923_120694832	3300031910	Soil	MSEGHQPRICRQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWTKVVKRDDP
Ga0306921_113716742	3300031912	Soil	MSEGQQPKICRHCKLPLIELDAYGERLCGCVGCNNWHALESGEWRHLSDDDIIALKGMVTRWTKRAQRDDP
Ga0310913_101590234	3300031945	Soil	MSEEHQPRICSQCDLPLIELDAYGERLCGSVGCNNWQALDSGEWRHLSDDDIAALKGMV
Ga0310910_103606041	3300031946	Soil	MSEAHQPRICLQCKLPLIELDAYGERLSGCVGCNNWQALESGEWRHLSDDDITALKGMVTRWTHEAD
Ga0310910_113536041	3300031946	Soil	RQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWTKVVKRDD
Ga0310909_102850602	3300031947	Soil	MGEGHQPKICLQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDGDITALKGMVTRWTNKAKRDDP
Ga0306926_103204001	3300031954	Soil	MSEGQQPKICRQCKLPLIELDAYGERLCGCVGCNNWQAFESGEWRHLPDDDITALRGMAARW
Ga0318530_104411641	3300031959	Soil	PGLLLVLGYFVGMSEAQQPRICCQCDLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDIAALKGMVTRWRKAAQRPDP
Ga0306922_111879541	3300032001	Soil	CGAGFAGVSEGHQPRICRQCKLPLIELDAYGERLCGCVGCNNWQALNSGEWRHLSDDDLTALKGMVTRWTKEAKRDDP
Ga0306922_114190951	3300032001	Soil	MSERQQPRICCKCELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDIAALKGMV
Ga0310911_107383812	3300032035	Soil	VSEGHQPRICRQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWTKVVKRDDP
Ga0306924_108411243	3300032076	Soil	MSEGQQPKICRQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALRGMVTRWRKAAQQQRDP
Ga0306924_124174641	3300032076	Soil	PKICLQCDLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDGDITALKGMVTRWTNKAKRDDP
Ga0306920_1005731922	3300032261	Soil	VSEGHQPRICRQCKLPLIELDAYGERLCGCVGCNNWQALNSGEWRHLSDDDLTALKGMVTRWTKEAKRDDP
Ga0306920_1020780261	3300032261	Soil	RVEYFVGMGEERQPRICRQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDGDITALKGMVTRWTNKAKRDDP
Ga0306920_1035305891	3300032261	Soil	VSLRSQAATDLCSVSFVRMSEERPSRTCCQCELPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSEDDIAALCGMVTRWRKAAQRPDP
Ga0310914_108521221	3300033289	Soil	EGHQPRICRQCKLPLIELDAYGERLCGCVGCNNWQALDSGEWRHLSDDDITALKGMVTRWREAAQRPDP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084789

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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