NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F084822

Metagenome Family F084822

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084822
Family Type Metagenome
Number of Sequences 112
Average Sequence Length 48 residues
Representative Sequence MARYDENAYNWLKRKGLADKYEHAGIYCIKIDNKIVYIGKSHNMLKRVA
Number of Associated Samples 31
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.57 %
% of genes near scaffold ends (potentially truncated) 40.18 %
% of genes from short scaffolds (< 2000 bps) 72.32 %
Associated GOLD sequencing projects 18
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (83.929 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Goat Feces
(84.821 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal distal gut
(97.321 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.57%    β-sheet: 12.99%    Coil/Unstructured: 58.44%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF00589Phage_integrase 10.71
PF13443HTH_26 6.25
PF02899Phage_int_SAM_1 4.46
PF14659Phage_int_SAM_3 3.57
PF13495Phage_int_SAM_4 3.57
PF00239Resolvase 2.68
PF01336tRNA_anti-codon 0.89
PF01381HTH_3 0.89
PF07690MFS_1 0.89
PF07833Cu_amine_oxidN1 0.89
PF12696TraG-D_C 0.89
PF02275CBAH 0.89
PF08274YjdM_Zn_Ribbon 0.89
PF13560HTH_31 0.89
PF03951Gln-synt_N 0.89
PF02978SRP_SPB 0.89
PF13936HTH_38 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG4973Site-specific recombinase XerCReplication, recombination and repair [L] 4.46
COG4974Site-specific recombinase XerDReplication, recombination and repair [L] 4.46
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 2.68
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 2.68
COG0174Glutamine synthetaseAmino acid transport and metabolism [E] 0.89
COG0541Signal recognition particle GTPaseIntracellular trafficking, secretion, and vesicular transport [U] 0.89
COG2824Uncharacterized Zn-ribbon-containing proteinGeneral function prediction only [R] 0.89
COG3049Penicillin V acylase or related amidase, Ntn superfamilyCell wall/membrane/envelope biogenesis [M] 0.89
COG4927Predicted choloylglycine hydrolaseGeneral function prediction only [R] 0.89

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.61 %
UnclassifiedrootN/A13.39 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001528|chfe1id_10025691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2353Open in IMG/M
3300010163|Ga0136175_10050768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes5217Open in IMG/M
3300012979|Ga0123348_10080100All Organisms → Viruses → Predicted Viral1789Open in IMG/M
3300012979|Ga0123348_10128070All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales1385Open in IMG/M
3300012979|Ga0123348_10350496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae807Open in IMG/M
3300012979|Ga0123348_10492447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae677Open in IMG/M
3300012979|Ga0123348_10716771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae561Open in IMG/M
3300012983|Ga0123349_10333528All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum1047Open in IMG/M
3300012983|Ga0123349_10456964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae888Open in IMG/M
3300012983|Ga0123349_10549160All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum807Open in IMG/M
3300012983|Ga0123349_10594788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum775Open in IMG/M
3300012983|Ga0123349_10643417All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae744Open in IMG/M
3300012983|Ga0123349_10657201Not Available736Open in IMG/M
3300012983|Ga0123349_10705789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae710Open in IMG/M
3300012983|Ga0123349_10989920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae599Open in IMG/M
3300018427|Ga0187903_10073125All Organisms → Viruses → Predicted Viral3333Open in IMG/M
3300018427|Ga0187903_10150149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales2138Open in IMG/M
3300018427|Ga0187903_10391432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales1144Open in IMG/M
3300018427|Ga0187903_10399343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum1128Open in IMG/M
3300018427|Ga0187903_10524706Not Available938Open in IMG/M
3300018427|Ga0187903_10646586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae815Open in IMG/M
3300018427|Ga0187903_10817442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum696Open in IMG/M
3300018427|Ga0187903_11140359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae560Open in IMG/M
3300018427|Ga0187903_11188674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae545Open in IMG/M
3300018430|Ga0187902_10163564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2120Open in IMG/M
3300018430|Ga0187902_10396785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum1201Open in IMG/M
3300018475|Ga0187907_10048922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales7373Open in IMG/M
3300018475|Ga0187907_10065697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes5895Open in IMG/M
3300018475|Ga0187907_10083131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales4951Open in IMG/M
3300018475|Ga0187907_10119766All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales3800Open in IMG/M
3300018475|Ga0187907_10129392All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes3599Open in IMG/M
3300018475|Ga0187907_10146302All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum3298Open in IMG/M
3300018475|Ga0187907_10253906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales2242Open in IMG/M
3300018475|Ga0187907_10349860Not Available1797Open in IMG/M
3300018475|Ga0187907_10371179Not Available1726Open in IMG/M
3300018475|Ga0187907_10597846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum1246Open in IMG/M
3300018475|Ga0187907_10623794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum1210Open in IMG/M
3300018475|Ga0187907_10751596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1066Open in IMG/M
3300018475|Ga0187907_11332497All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae720Open in IMG/M
3300018475|Ga0187907_11618710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum630Open in IMG/M
3300018475|Ga0187907_11641804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae624Open in IMG/M
3300018475|Ga0187907_11691414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae612Open in IMG/M
3300018475|Ga0187907_12088118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae531Open in IMG/M
3300018493|Ga0187909_10426762All Organisms → cellular organisms → Bacteria1429Open in IMG/M
3300018493|Ga0187909_10511772All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum1266Open in IMG/M
3300018493|Ga0187909_10512637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae1264Open in IMG/M
3300018493|Ga0187909_10818979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes925Open in IMG/M
3300018493|Ga0187909_10976438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum822Open in IMG/M
3300018493|Ga0187909_11485597Not Available621Open in IMG/M
3300018494|Ga0187911_10168096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum2857Open in IMG/M
3300018494|Ga0187911_11048623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum851Open in IMG/M
3300018494|Ga0187911_11766416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae601Open in IMG/M
3300018495|Ga0187908_10378303All Organisms → Viruses → Predicted Viral1646Open in IMG/M
3300018495|Ga0187908_10747529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium CAG:110_56_81038Open in IMG/M
3300018495|Ga0187908_11035770Not Available833Open in IMG/M
3300018495|Ga0187908_11759059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum582Open in IMG/M
3300018878|Ga0187910_11596017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae694Open in IMG/M
3300018878|Ga0187910_12558037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae507Open in IMG/M
3300019376|Ga0187899_10491090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae589Open in IMG/M
3300019376|Ga0187899_10510035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum575Open in IMG/M
3300022654|Ga0216347_10342060All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum876Open in IMG/M
3300022660|Ga0216342_10351420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1337Open in IMG/M
3300022660|Ga0216342_10642815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae873Open in IMG/M
3300022661|Ga0216339_10132268All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2626Open in IMG/M
3300022661|Ga0216339_10235247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1757Open in IMG/M
3300022753|Ga0216341_10786881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium CAG:110_56_8709Open in IMG/M
3300022753|Ga0216341_11137369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae546Open in IMG/M
3300022753|Ga0216341_11265519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae505Open in IMG/M
3300023371|Ga0216340_10161466All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2564Open in IMG/M
3300023371|Ga0216340_10353822All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum1488Open in IMG/M
3300023371|Ga0216340_11185761Not Available644Open in IMG/M
3300023371|Ga0216340_11583133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae523Open in IMG/M
3300023713|Ga0257074_1032382All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum790Open in IMG/M
3300023714|Ga0257073_1049444Not Available728Open in IMG/M
3300024268|Ga0257090_10310501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales1872Open in IMG/M
3300024268|Ga0257090_10453684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1458Open in IMG/M
3300024268|Ga0257090_11062587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes837Open in IMG/M
3300024269|Ga0257076_10167883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2761Open in IMG/M
3300024269|Ga0257076_11268274Not Available769Open in IMG/M
3300024269|Ga0257076_11914230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum588Open in IMG/M
3300024269|Ga0257076_12044269Not Available562Open in IMG/M
3300024270|Ga0257091_10993653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae891Open in IMG/M
3300024272|Ga0257077_11435680Not Available754Open in IMG/M
3300024272|Ga0257077_11811610Not Available645Open in IMG/M
3300024303|Ga0257089_10046135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales6457Open in IMG/M
3300028454|Ga0307245_1007790All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum994Open in IMG/M
3300028833|Ga0247610_10164740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2262Open in IMG/M
3300029305|Ga0307249_10012397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales59080Open in IMG/M
3300029305|Ga0307249_10099244All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes10772Open in IMG/M
3300029305|Ga0307249_10109221All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales9873Open in IMG/M
3300029305|Ga0307249_10120944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes8998Open in IMG/M
3300029305|Ga0307249_10145409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes7626Open in IMG/M
3300029305|Ga0307249_10202548All Organisms → cellular organisms → Bacteria5690Open in IMG/M
3300029305|Ga0307249_10231939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales5061Open in IMG/M
3300029305|Ga0307249_10308586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales3971Open in IMG/M
3300029305|Ga0307249_10400072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales3202Open in IMG/M
3300029305|Ga0307249_10546092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia2484Open in IMG/M
3300029305|Ga0307249_10701940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales2027Open in IMG/M
3300029305|Ga0307249_10924318All Organisms → cellular organisms → Bacteria1625Open in IMG/M
3300029305|Ga0307249_11572108All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum1057Open in IMG/M
3300029305|Ga0307249_12194114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum809Open in IMG/M
3300029705|Ga0224414_10392036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2012Open in IMG/M
3300029705|Ga0224414_11403987Not Available781Open in IMG/M
3300029705|Ga0224414_12262214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum543Open in IMG/M
3300031555|Ga0318466_10383676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales3101Open in IMG/M
3300031555|Ga0318466_10853975All Organisms → cellular organisms → Bacteria1620Open in IMG/M
3300031555|Ga0318466_11694437All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes924Open in IMG/M
3300031555|Ga0318466_12469799All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae668Open in IMG/M
3300032030|Ga0310697_11722311Not Available576Open in IMG/M
3300032167|Ga0224413_11215306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Butyricicoccus → Butyricicoccus pullicaecorum922Open in IMG/M
3300032167|Ga0224413_11816026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae670Open in IMG/M
3300032167|Ga0224413_12338538Not Available545Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Goat FecesHost-Associated → Mammals → Digestive System → Large Intestine → Fecal → Goat Feces84.82%
FecalHost-Associated → Mammals → Digestive System → Large Intestine → Fecal → Fecal11.61%
RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen1.79%
Primate FecalHost-Associated → Mammals → Digestive System → Large Intestine → Fecal → Primate Fecal0.89%
Ictidomys Tridecemlineatus CecumHost-Associated → Mammals → Digestive System → Large Intestine → Cecum → Ictidomys Tridecemlineatus Cecum0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001528Virome of Chimps sample 1Host-AssociatedOpen in IMG/M
3300010163Cecal microbial community of the 13 lined ground squirrel in Duluth, Minnesota, USA. Combined Assembly of 10 SPsHost-AssociatedOpen in IMG/M
3300012979Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung B1 Day 1 MetagenomeHost-AssociatedOpen in IMG/M
3300012983Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung C2 Day 2 MetagenomeHost-AssociatedOpen in IMG/M
3300018427Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Reed Canary Grass, Gen0, Rep 2, ChloramphenicolHost-AssociatedOpen in IMG/M
3300018430Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Bagasse, Gen0, Rep 2, ChloramphenicolHost-AssociatedOpen in IMG/M
3300018475Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 1Host-AssociatedOpen in IMG/M
3300018493Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 3Host-AssociatedOpen in IMG/M
3300018494Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 2Host-AssociatedOpen in IMG/M
3300018495Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 2Host-AssociatedOpen in IMG/M
3300018878Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 1Host-AssociatedOpen in IMG/M
3300019376Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Bagasse, Gen0, Rep 3, Penicillin and StreptomycinHost-AssociatedOpen in IMG/M
3300022654Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Alfalfa, Gen0, Rep 2, Chloramphenicol (v2)Host-AssociatedOpen in IMG/M
3300022660Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 2 (v2)Host-AssociatedOpen in IMG/M
3300022661Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 2 (v2)Host-AssociatedOpen in IMG/M
3300022753Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 3 (v2)Host-AssociatedOpen in IMG/M
3300023371Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 1 (v2)Host-AssociatedOpen in IMG/M
3300023713Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Xylan, Gen0, Rep 2 Spades (v3)Host-AssociatedOpen in IMG/M
3300023714Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Xylan, Gen0, Rep 1 Spades (v2)Host-AssociatedOpen in IMG/M
3300024268Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 2 Spades (v3)Host-AssociatedOpen in IMG/M
3300024269Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 2 Spades (v3)Host-AssociatedOpen in IMG/M
3300024270Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 1 Spades (v3)Host-AssociatedOpen in IMG/M
3300024272Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 1 Spades (v3)Host-AssociatedOpen in IMG/M
3300024303Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 3 Spades (v3)Host-AssociatedOpen in IMG/M
3300028454Goat Fecal Pellet Co-assembly of all samples untreated with antibioticsHost-AssociatedOpen in IMG/M
3300028833Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2Host-AssociatedOpen in IMG/M
3300029305Goal Fecal Pellet Co-assembly of all three pellet samples and three diluted pellet samples.Host-AssociatedOpen in IMG/M
3300029705Goat Fecal Pellets diluted in mediaHost-AssociatedOpen in IMG/M
3300031555Goal Fecal Pellet Co-assembly of all three pellet samples and three diluted pellet samples.(v2)Host-AssociatedOpen in IMG/M
3300032030Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 (v2)Host-AssociatedOpen in IMG/M
3300032167Three Goat Fecal PelletsHost-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
chfe1id_1002569123300001528Primate FecalMANYEENMYNWLKRKGFAEKYEHAGIYCIKIDQKIVYIGKSTNMLRRVS*
Ga0136175_1005076843300010163Ictidomys Tridecemlineatus CecumMPKGSYEENAYKWFKRKGYASKYEYPGIYCIKIDNDIVYIGKSHNMLKRVA*
Ga0123348_1008010053300012979FecalMGSYADNAYEWLKRKGLADKYEHAGIYCIKIDDDIVYIGKSTNMLRRVA*
Ga0123348_1012807033300012979FecalMARYEENAYNWLKRNGLSDKYEHAGIYCIKIDESVVYIGKSYNMLKRVA*
Ga0123348_1035049633300012979FecalMASYADNAYEWLKRKGLAEKYEHAGIYCIKIDAEIVYIGKSTNMLRRVA*
Ga0123348_1049244723300012979FecalMANYSENMYNWLKKKGLAAKYEYAGIYCIKIDLNIVYIGKSTNMLRRVA*
Ga0123348_1071677123300012979FecalMPNYVENMMNYLKRKGLADKYEKAGIYCIKIDNDIVYVGKSHNMLKRVA*
Ga0123349_1033352813300012983FecalMGNYVENTVAWMERRGLANKYRHAGIYCIKIDAEIVYIGKSANMLRR
Ga0123349_1045696413300012983FecalMPNYVENMMNYLKRKGLADKYEKAGIYCIKIDNDIVYIGKSHNMLKRVA*
Ga0123349_1054916013300012983FecalMGSYSDNAYEWLKRKGLADKYEHAGIYCIKIDADIVYIGKSMNMLRRVA*
Ga0123349_1059478813300012983FecalMATYEQNTYEWMKRQGLEDKFGHAGIYCIKIDENIVYIGKSMDMLWRMA*
Ga0123349_1064341713300012983FecalMASYADNAYEWLKRKGLADKYEHAGVYCIKIDADIVYIGKSMNMLRRVA*
Ga0123349_1065720113300012983FecalMANYAENMYNWLKRRGLAAKYEFAGIYCIKVDDKIVYIGKSGNMLQRIV*
Ga0123349_1070578923300012983FecalMGSYADNAYEWLKRKGLAEKYEHAGIYCIKIDAEIVYIGKSTNMLRRVA*
Ga0123349_1098992033300012983FecalMGYAENMYEWLKRKGYAEKYDHAGIYCIKIDDTIVYIGKSHNMLKRVSQHYAAIMG*
Ga0187903_1007312533300018427Goat FecesMGSYADNAYEWLKRKGLADKYEHAGIYCIKIDDDIVYIGKSMNMLRRVA
Ga0187903_1015014923300018427Goat FecesMSNYAKNMYSWLKRRGFADKYEFAGIYCIKIDENIVYIGKSSNMFRRISEHYTGI
Ga0187903_1039143233300018427Goat FecesMPSRYETNAYGWLKRKGLAHKYEHAGIYCIKIDDDIVYIGKSHNMLMRVA
Ga0187903_1039934333300018427Goat FecesMPSRYEANAYGWLKRKGLAPKYEHAGIYCIKIDDDIVYIGKSHNMLMRIA
Ga0187903_1052470623300018427Goat FecesMARYEENAYNWLKRNGLADKYEHAGIYCIKIDETVVYIGKSYNMLKRVA
Ga0187903_1064658623300018427Goat FecesMASYADNAYEWLKRKGLADKYEHAGIYCIKIDADIVYIGKSMNMLRRVA
Ga0187903_1081744213300018427Goat FecesLNYAENVYNWLKRKGFAAKYEHAGIYCIKVDETIVYIGKSTNMLRRVS
Ga0187903_1114035923300018427Goat FecesMGHRYVDNTYAWLKRKGLAEKYEHAGIYCIKIDNDIAYIGKSTNMLLRIA
Ga0187903_1118867423300018427Goat FecesLNYAENVYNWLKRKGLAAKYEHAGIYCIKVDETIVYVGKSTNMLRRVS
Ga0187902_1016356413300018430Goat FecesMARYDENAYNWLKRKGLADKYEHAGIYCIKIDNKIVYIGKSHNMLKRVAQHYVGIKL
Ga0187902_1039678543300018430Goat FecesLMGHRYVDNTYAWLKRKGLAEKYEHAGIYCIKIDNDIAYIGKSTNMLLRIA
Ga0187907_1004892233300018475Goat FecesMPNYETNMINYLKRNGLDKKYNFAGIYCIKIDDEIVYIGKSYNMLKRVV
Ga0187907_1006569723300018475Goat FecesMATYVENAYNWLKRKGLAEKYEHAGIYCIKLDNDIVYIGKSGNMLRRIAWHYVGI
Ga0187907_1008313173300018475Goat FecesMTKYEENAYNWLKRKGLADKYEHAGIYCIKIDETVVYIGKSYNMLKRVA
Ga0187907_1011976683300018475Goat FecesMATYEDNAYNWLKRKGLATKYEHAGIYCIKIDDKIVYIGKSANMLRRIA
Ga0187907_1012939233300018475Goat FecesMGYAENMYEWLKRKGYAEKYDHAGIYCIKIDDTIVYIGKSHNMLKRVSQHYAAIMG
Ga0187907_1014630253300018475Goat FecesMATYEQNTYEWMKRQGYEDKFGHAGIYCIRIDESIVYIGKSMDMLRRMA
Ga0187907_1025390643300018475Goat FecesMPNYVDNMINFLKRKGLADKYEFAGIYCIKIDDDIVYIGKSHNMLKRVA
Ga0187907_1034986033300018475Goat FecesMANYAENMYNWLKRRGLAAKYEFAGIYCIKVDETIVYIGKSGNMLRRIA
Ga0187907_1037117933300018475Goat FecesMARNYVENMIAWLTRKGYSEKYKGAGIYCIKIDDQIVYIGKSTNMLKRVA
Ga0187907_1059784633300018475Goat FecesMGNRYVDNMYNWLKKKGYAEKYEHAGIYCIKVDNEIVYIGKSHNMLKRVA
Ga0187907_1062379423300018475Goat FecesMPSRYEVNAYGWLKRKGLANKYEHAGIYCIKIDDDIVYIGKSHNMLMRVA
Ga0187907_1075159633300018475Goat FecesLNYAENVYNWLKRKGLAAKYEHAGIYCIKVDETIVYVGKSTNMLRRVA
Ga0187907_1133249723300018475Goat FecesMPNYVENMMNYLKRKGLADKYEKAGIYCIKIDNDIVYIGKSHNMLKRVA
Ga0187907_1161871023300018475Goat FecesMATYEENMYNYLKRKGLENKFDHAGIYCIKVDGHIVYIGKSRNMLRRMA
Ga0187907_1164180413300018475Goat FecesMGYAENMYEWLKRKGYAEKYDHAGIYCIKIDDTIVYIGKSHNMLKRVSQHYAAIM
Ga0187907_1169141423300018475Goat FecesMPNYETNMYNFLKRKGLADKYEKAGIYCIKIDDDIIYIGKSHNMLKRVA
Ga0187907_1208811823300018475Goat FecesMATYEENAYQWLKRKGLSAKYEHAGIYCIKISDRIVYIGKSANMLRRIA
Ga0187909_1042676233300018493Goat FecesMTRYEENMYNWLKRKGYADKYEHAGIYCIKIDDTIVYIGKSSNMLKRVA
Ga0187909_1051177223300018493Goat FecesMPSRYEVNAYGWLERKGLANKYEHAGIYCIKIDDDIVYIGKSHNMLMRVA
Ga0187909_1051263723300018493Goat FecesMANYVDNMCAWLRRKGYTDKYDHAGIYCIKIDDEIVYIGKSHNILKRVA
Ga0187909_1081897913300018493Goat FecesEWMKRQGYEDKFGHAGIYCIRIDESIVYIGKSMDMLRRMA
Ga0187909_1097643813300018493Goat FecesMANYAENMYNWLKQRGLAAKYEFAGIYCIKVNEKIVYIGKSGNMLRRIA
Ga0187909_1148559723300018493Goat FecesMATYEDNAYNWLKSKGLAAKYEHAGIYCIKIDGKIVYIG
Ga0187911_1016809643300018494Goat FecesMANYEENAYHWMKHNGLAEKYEHAGIYCIKIDKEIVYIGKSANILRRIA
Ga0187911_1104862323300018494Goat FecesMAKKYEENVYNWLKRKGLAAKYEHAGIYCIKIDRHIVYIGKSFNMLKRIS
Ga0187911_1176641613300018494Goat FecesLKRNGLADKYEHAGIYCIKIDETVVYIGKSYNMLKRVA
Ga0187908_1037830313300018495Goat FecesMPNYVENMMNYLKRKGLADKYEKAGIYCIKIDNDIVYIGKSHNMLKRVT
Ga0187908_1074752913300018495Goat FecesEANRKEVCILMPSRYEANAYGWLKRKGLAPKYEHAGIYCIKIDDDIVYIGKSHNMLMRIA
Ga0187908_1103577023300018495Goat FecesMPNYVDNMTNYLKRKGLADKYEKAGIYCIKINDDIVYIGKSHNMLKRVA
Ga0187908_1175905913300018495Goat FecesMATYEDNAYNWLKRKGLAEKYEHAGIYCIKIDDKIVYIGKSANMLRRIA
Ga0187910_1159601733300018878Goat FecesMGNSYVDNMYNWLKEKGYAEKYEHAGIYCIKVDNEIVYIGKSHNMLKRVA
Ga0187910_1255803733300018878Goat FecesWLKRNGLADKYEHAGIYCIKIDETVVYIGKSYNMLKRVA
Ga0187899_1049109013300019376Goat FecesDNAYEWLKRKGLADKYEHAGIYCIKIDDDIVYIGKSMNMLRRVA
Ga0187899_1051003523300019376Goat FecesMPSRYEANAYGWLKRKGLAPKYEHAGIYCIKIDDDIVYIGKS
Ga0216347_1034206013300022654Goat FecesMATYEDNVYNWLKRKGLAEKYEHAGIYCIKIDDKIVYIGKSGNMLRRIAQHYAG
Ga0216342_1035142043300022660Goat FecesTYEENMYNYLKRKGLENKFDHAGIYCIKVDGHIVYIGKSRNMLRRMA
Ga0216342_1064281513300022660Goat FecesMARYDENAYNWLKRKGLADKYEHAGIYCIKIDNKIVYIGKSHNMLKRVA
Ga0216339_1013226873300022661Goat FecesLNYAENVYNWLKRKGLAAKYEHAGIYCIKVDETIVYIGKSTNMLRRVS
Ga0216339_1023524733300022661Goat FecesVYNWLKRKGFAAKYEHAGIYCIKVDETIVYIGKSTNMLRRVS
Ga0216341_1078688113300022753Goat FecesKGVYILMPNYVENMMNYLKRKGLADKYEKAGIYCIKIDNDIVYIGKSHNMLKRVA
Ga0216341_1113736923300022753Goat FecesMATYEDNAYNWLKSKGLAAKYEHAGIYCIKIDGKIVYIGKSAN
Ga0216341_1126551923300022753Goat FecesNAYNWLKRNGLADKYEHAGIYCIKIDETVVYIGKSYNMLKRVA
Ga0216340_1016146613300023371Goat FecesLKRKGLAAKYEHAGIYCIKVDETIVYIGKSTNMLRRVS
Ga0216340_1035382233300023371Goat FecesMTKYEENAYNWLKRKGLADKYEHAGIYCIKIDETVVYIGKSYNM
Ga0216340_1118576113300023371Goat FecesMATYEENMYNYLKRKGLENKFDHAGIYCIKVDGHIVYIGK
Ga0216340_1158313323300023371Goat FecesMGTYTENAYNWLKGKGLENKYKFAGIYCIKIDRDIVYIGKSANMLRRIAEHYV
Ga0257074_103238223300023713Goat FecesMATYEDNAYNWLKRKGLADKYEHAGIYCIKIDDKIVYIGKSAN
Ga0257073_104944413300023714Goat FecesMARYDENAYNWLKRKGLAEKYEHAGIYCIKIDEKIVYIGKSHNMLKRVAQHYAGI
Ga0257090_1031050113300024268Goat FecesMGYAENMYEWLKRKGYADKYEHAGIYCIKIDATIVYIGKSHNMLKRVA
Ga0257090_1045368413300024268Goat FecesMGYAENMYEWLKRKGYAPKYDHAGIYCIKIDDTIVYIGKSHNMLKRVSQHYAAI
Ga0257090_1106258733300024268Goat FecesMATYSENVYDMLKRKGLDKKYEFAGIYCIKLNNKIVYIGKSANMLRRI
Ga0257076_1016788313300024269Goat FecesMARYDENAYNWLKRKGLADKYEHAGIYCIKIDNTTVYIGKSHNMLKRVA
Ga0257076_1126827413300024269Goat FecesMARYDENAYNWLKRKGLADKYEHAGIYCIKIDNKIVYIGKSHNMLKRVAQHY
Ga0257076_1191423023300024269Goat FecesMAKKYEENVYNWLKRKGLAAKYEHAGIYCIKIDRHIVY
Ga0257076_1204426923300024269Goat FecesKRGVYILMATYSENVYDMLKRKGLDKKYEFAGIYCIKLNNKIVYIGKSANMLRRIA
Ga0257091_1099365333300024270Goat FecesMPNYVENMMNYLKRKGLADKYEKAGIYCIKIDNDIVYIGKSHNMLMRVA
Ga0257077_1143568023300024272Goat FecesMGYAENMYEWLKRKGYAPKYDHAGIYCIKIDDTIVYIGKSYNMLKRVSQHYAAIVG
Ga0257077_1181161013300024272Goat FecesRKGLDKKYEFAGIYCIKLNNKIVYIGKSANMLRRIA
Ga0257089_1004613583300024303Goat FecesMASYADNAYEWLKRKGLADKYEHAGIYCIKIDDDIVYIGKSMNMLRRVA
Ga0307245_100779013300028454Goat FecesMATYEDNAYNWMKRKGLASKYEHAGIYCIKIDNDIVYIGKSGNM
Ga0247610_1016474013300028833RumenMATYEDNVYNLLKRKGLAPKYERAGIYCIKQNGKIIYIGKSVNMLRRIA
Ga0307249_10012397273300029305Goat FecesMANKKNTYEENMYNKLKQKGLADKYEHAGIYCIKIDDDIVYIGKSHNMLRRVS
Ga0307249_10099244103300029305Goat FecesMATYSENVYDMLKRKGLDKKYEFAGIYCIKLNNKIVYIGKSANMLRRIA
Ga0307249_1010922133300029305Goat FecesMAKKYEENVYNWLKRKGLAAKYEHAGIYCIKIDSHIVYIGKSFNMLKRIS
Ga0307249_1012094473300029305Goat FecesLSMKKNYVDNMYAWLTRKGLAGKYEHAGIYCIKLDNRIVYIGKSTNMLKRIA
Ga0307249_10145409103300029305Goat FecesMATYVDNAYNWLKRKGLAAKYEHAGIYCIKIDGKIVYIGKSANMLRRIA
Ga0307249_1020254843300029305Goat FecesMANYAENMYNWLKQRGLAAKYEFAGIYCIKVDEKIVYIGKSGNMLRRIA
Ga0307249_1023193973300029305Goat FecesMATYEDNAYNWLKSKGLAAKYEHAGIYCIKIDGKIVYIGKSANMLRRIA
Ga0307249_1030858683300029305Goat FecesMGKYEENMYNSLNKKWLEKKFDHAGIYCITVDGHIVYVGKSHNMLRRMA
Ga0307249_1040007213300029305Goat FecesMPSRYEVNAYGWLKRKGLANKYEHAGIYCIKIDDDIVYIGK
Ga0307249_1054609263300029305Goat FecesMPNYVENMMNYLKRKGLADKYEKAGIYCIKIDNDIVYIGKSHNM
Ga0307249_1070194023300029305Goat FecesMPSRYETNAYGWLKRKGLAPKYEHAGIYCIKIDDDIVYIGKSHNMLMRVA
Ga0307249_1092431833300029305Goat FecesNYVENMMNYLKRKGLADKYEKAGIYCIKIDNDIVYIGKSHNMLKRVA
Ga0307249_1157210813300029305Goat FecesMGYAENMYEWLKRKGYAPKYDHAGIYCIKIDDTIVYIGKSHNMLKRVSQHYAAIMG
Ga0307249_1219411423300029305Goat FecesMAKKYEENVYNWLKRKGLADKYEHAGIYCIKIDRHIVYIGKSFNMLKRIS
Ga0224414_1039203643300029705Goat FecesCILNYAENVYNWLKRKGLAAKYEHAGIYCIKVDETIVYVGKSTNMLRRVA
Ga0224414_1140398713300029705Goat FecesILMATYSENVYDMLKRKGLDKKYEFAGIYCIKLNNKIVYIGKSANMLRRIA
Ga0224414_1226221423300029705Goat FecesMTRYEENMYNWLKRKGYADKYEHAGIYCIKIDDTIVYIGKSSN
Ga0318466_1038367613300031555Goat FecesNYAENMYNWLKRRGLAAKYEFAGIYCIKVDDKIVYIGKSGNMLRRIA
Ga0318466_1085397533300031555Goat FecesVENMMNYLKRKGLADKHEKAGIYCIKIDNDIVYIGKSHNMLKRVA
Ga0318466_1169443733300031555Goat FecesWLKRKGLAAKYEHAGIYCIKVDETIVYIGKSTNMLRRVS
Ga0318466_1246979923300031555Goat FecesSRYEVNAYGWLKRKGLANKYEHAGIYCIKIDDDIVYIGKSHNMLMRVA
Ga0310697_1172231123300032030RumenMSTYEDNVVRMLKRRGYADKYEHAGIYCIRQNNKIVYVGKSVNMLRRIA
Ga0224413_1121530633300032167Goat FecesMATYEENAYQWLKRKGLSAKYEHAGIYCIKISDRIVYIGKS
Ga0224413_1181602613300032167Goat FecesKGEKGVYILMPSRYEVNAYGWLKRKGLANKYEHAGIYCIKIDDDIVYIGKSHNMLMRVA
Ga0224413_1233853823300032167Goat FecesMPNYVDNMTNYLKRKGLADKYEKAGIYCIKIDDDIVYIGKSHN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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