Metagenome / Metatranscriptome Family F084891

Basic Information
Family ID	F084891
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	79 residues
Representative Sequence	MPKLLPGIVGCTGAVVIASENSSPEAALVLKLRTESGQEVFLPISEMGARQVQKVIGEFNRRRDFLFVEERPAAEATLQ
Number of Associated Samples	68
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	31.25 %
% of genes from short scaffolds (< 2000 bps)	98.21 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Unclassified (79.464 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.821 % of family members)
Environment Ontology (ENVO)	Unclassified (46.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.107 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 22.43% β-sheet: 19.63% Coil/Unstructured: 57.94%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00216	Bac_DNA_binding	3.57
PF04392	ABC_sub_bind	1.79
PF02796	HTH_7	1.79
PF13419	HAD_2	0.89
PF12844	HTH_19	0.89
PF04986	Y2_Tnp	0.89
PF12762	DDE_Tnp_IS1595	0.89
PF00300	His_Phos_1	0.89
PF02481	DNA_processg_A	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	3.57
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	1.79
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
All Organisms	root	All Organisms	20.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
cellular organisms	root	All Organisms → cellular organisms	20.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ02JTCGD	Not Available	536	Open in IMG/M
3300004091\|Ga0062387_100509994	Not Available	842	Open in IMG/M
3300004091\|Ga0062387_100615436	Not Available	781	Open in IMG/M
3300004092\|Ga0062389_100570334	Not Available	1291	Open in IMG/M
3300004092\|Ga0062389_100578436	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300004092\|Ga0062389_104719500	Not Available	513	Open in IMG/M
3300004631\|Ga0058899_11496298	Not Available	526	Open in IMG/M
3300004635\|Ga0062388_101986357	Not Available	601	Open in IMG/M
3300005332\|Ga0066388_104085089	Not Available	744	Open in IMG/M
3300005332\|Ga0066388_105804940	Not Available	624	Open in IMG/M
3300005332\|Ga0066388_106572031	Not Available	586	Open in IMG/M
3300005434\|Ga0070709_11105576	Not Available	634	Open in IMG/M
3300005434\|Ga0070709_11658135	Not Available	521	Open in IMG/M
3300005764\|Ga0066903_101019575	Not Available	1516	Open in IMG/M
3300005764\|Ga0066903_103366799	Not Available	863	Open in IMG/M
3300005764\|Ga0066903_103683721	Not Available	824	Open in IMG/M
3300005764\|Ga0066903_104614552	Not Available	734	Open in IMG/M
3300005764\|Ga0066903_109044653	Not Available	504	Open in IMG/M
3300005921\|Ga0070766_10369595	Not Available	934	Open in IMG/M
3300005921\|Ga0070766_10929925	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300005994\|Ga0066789_10273513	Not Available	708	Open in IMG/M
3300006028\|Ga0070717_11989980	Not Available	524	Open in IMG/M
3300010046\|Ga0126384_12170986	Not Available	534	Open in IMG/M
3300010360\|Ga0126372_11479144	Not Available	714	Open in IMG/M
3300010366\|Ga0126379_12387942	Not Available	628	Open in IMG/M
3300010379\|Ga0136449_100529351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2035	Open in IMG/M
3300010379\|Ga0136449_104187320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300010401\|Ga0134121_12639641	Not Available	546	Open in IMG/M
3300012984\|Ga0164309_10251477	Not Available	1247	Open in IMG/M
3300014489\|Ga0182018_10490061	Not Available	651	Open in IMG/M
3300014493\|Ga0182016_10317102	Not Available	948	Open in IMG/M
3300014501\|Ga0182024_10199911	All Organisms → cellular organisms → Bacteria → Proteobacteria	2734	Open in IMG/M
3300014501\|Ga0182024_10953383	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300014969\|Ga0157376_12743799	Not Available	532	Open in IMG/M
3300015372\|Ga0132256_103082780	Not Available	560	Open in IMG/M
3300016294\|Ga0182041_11179220	Not Available	698	Open in IMG/M
3300016341\|Ga0182035_10187253	Not Available	1626	Open in IMG/M
3300016341\|Ga0182035_10945187	Not Available	762	Open in IMG/M
3300016341\|Ga0182035_11823386	Not Available	551	Open in IMG/M
3300016357\|Ga0182032_11731915	Not Available	545	Open in IMG/M
3300016371\|Ga0182034_10692739	Not Available	866	Open in IMG/M
3300016371\|Ga0182034_11296526	Not Available	635	Open in IMG/M
3300016371\|Ga0182034_11678927	Not Available	558	Open in IMG/M
3300016387\|Ga0182040_10777336	Not Available	788	Open in IMG/M
3300016387\|Ga0182040_10829571	Not Available	763	Open in IMG/M
3300016404\|Ga0182037_10534826	Not Available	987	Open in IMG/M
3300016404\|Ga0182037_11890621	Not Available	534	Open in IMG/M
3300016422\|Ga0182039_11473272	Not Available	619	Open in IMG/M
3300016422\|Ga0182039_12018823	Not Available	531	Open in IMG/M
3300016445\|Ga0182038_10184680	Not Available	1626	Open in IMG/M
3300016445\|Ga0182038_10456907	Not Available	1082	Open in IMG/M
3300016445\|Ga0182038_10714945	Not Available	873	Open in IMG/M
3300018060\|Ga0187765_11225967	Not Available	527	Open in IMG/M
3300021405\|Ga0210387_11260857	Not Available	640	Open in IMG/M
3300021407\|Ga0210383_10879712	Not Available	764	Open in IMG/M
3300021477\|Ga0210398_10411515	All Organisms → cellular organisms → Bacteria → Proteobacteria	1103	Open in IMG/M
3300021478\|Ga0210402_10678870	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300021478\|Ga0210402_10730537	Not Available	914	Open in IMG/M
3300021478\|Ga0210402_10758330	Not Available	895	Open in IMG/M
3300021478\|Ga0210402_11507777	Not Available	600	Open in IMG/M
3300021478\|Ga0210402_11814282	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300022531\|Ga0242660_1253227	Not Available	503	Open in IMG/M
3300022720\|Ga0242672_1146426	Not Available	505	Open in IMG/M
3300025906\|Ga0207699_11337228	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300026291\|Ga0209890_10229796	Not Available	584	Open in IMG/M
3300029999\|Ga0311339_10706333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	985	Open in IMG/M
3300030007\|Ga0311338_11664575	Not Available	581	Open in IMG/M
3300031028\|Ga0302180_10474442	Not Available	616	Open in IMG/M
3300031231\|Ga0170824_105706336	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300031236\|Ga0302324_103161830	Not Available	543	Open in IMG/M
3300031469\|Ga0170819_17179307	Not Available	500	Open in IMG/M
3300031474\|Ga0170818_101701112	Not Available	800	Open in IMG/M
3300031573\|Ga0310915_10426844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	942	Open in IMG/M
3300031573\|Ga0310915_10894940	Not Available	622	Open in IMG/M
3300031719\|Ga0306917_10591349	Not Available	873	Open in IMG/M
3300031719\|Ga0306917_11460239	Not Available	527	Open in IMG/M
3300031744\|Ga0306918_11095782	Not Available	617	Open in IMG/M
3300031833\|Ga0310917_10209276	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300031879\|Ga0306919_10749004	Not Available	752	Open in IMG/M
3300031879\|Ga0306919_11231768	Not Available	568	Open in IMG/M
3300031890\|Ga0306925_10476394	Not Available	1332	Open in IMG/M
3300031890\|Ga0306925_10774567	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300031890\|Ga0306925_11065171	Not Available	820	Open in IMG/M
3300031890\|Ga0306925_12173170	Not Available	517	Open in IMG/M
3300031897\|Ga0318520_10244219	Not Available	1070	Open in IMG/M
3300031910\|Ga0306923_10370279	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300031910\|Ga0306923_10632257	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300031910\|Ga0306923_10969366	Not Available	926	Open in IMG/M
3300031910\|Ga0306923_12060093	Not Available	577	Open in IMG/M
3300031912\|Ga0306921_11555622	Not Available	721	Open in IMG/M
3300031912\|Ga0306921_12506610	Not Available	535	Open in IMG/M
3300031942\|Ga0310916_10433656	Not Available	1119	Open in IMG/M
3300031942\|Ga0310916_10547900	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300031942\|Ga0310916_11266842	Not Available	608	Open in IMG/M
3300031945\|Ga0310913_10721091	Not Available	705	Open in IMG/M
3300031946\|Ga0310910_10781482	Not Available	753	Open in IMG/M
3300031947\|Ga0310909_11155113	Not Available	628	Open in IMG/M
3300031947\|Ga0310909_11441098	Not Available	550	Open in IMG/M
3300031954\|Ga0306926_10602152	Not Available	1342	Open in IMG/M
3300031954\|Ga0306926_10769628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1163	Open in IMG/M
3300032001\|Ga0306922_11520292	Not Available	669	Open in IMG/M
3300032076\|Ga0306924_11652733	Not Available	673	Open in IMG/M
3300032076\|Ga0306924_12119355	Not Available	576	Open in IMG/M
3300032090\|Ga0318518_10661228	Not Available	532	Open in IMG/M
3300032160\|Ga0311301_11491506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300032261\|Ga0306920_100815339	Not Available	1369	Open in IMG/M
3300032261\|Ga0306920_101501580	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300032515\|Ga0348332_10106741	Not Available	505	Open in IMG/M
3300032892\|Ga0335081_10381526	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300032892\|Ga0335081_10671047	Not Available	1264	Open in IMG/M
3300032892\|Ga0335081_11225729	Not Available	853	Open in IMG/M
3300033289\|Ga0310914_10501859	All Organisms → cellular organisms → Bacteria → Proteobacteria	1098	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.21%
Host-Associated	Host-Associated	1.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.86%
Aquatic	Environmental → Aquatic	5.36%
Plants	Host-Associated → Plants	1.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.39%
Freshwater	Environmental → Aquatic → Freshwater	5.36%
Peat	Environmental → Terrestrial → Peat	3.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.79%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.07%
Loam	Environmental → Terrestrial → Soil → Loam	13.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.57%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.14%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.89%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_10065470	2170459024	Grass Soil	MPKLLPGIVGCAGAVVIASENSSPEAVLVLKLRTESGQEVFLPISEVGARQVQKVIGEFNRGRDFLFVEEKPAAEVTLQ
Ga0062387_1005099942	3300004091	Bog Forest Soil	MPVTRIPGMVACTGAVVVASESSNLEALLTLTLRTEGGDQYLVPLSEQTTRQLQKMISEFNRARDLAVLEERLAANGTPQ*
Ga0062387_1006154363	3300004091	Bog Forest Soil	MSKLLPGIVACTGAVVIASENSDPEAALVLKLRTEAGQEVLLPLSERGAKQVQMVIGEFNRSRDLLFVEERPAAAATLQ*
Ga0062389_1005703343	3300004092	Bog Forest Soil	MPVTKLPRIVACTGAIVVASENSNPEALLTLKLTTEAGGQVLLPLSERTTRHLQLVISEFNRTRDLLFVEERPAATATLQ*
Ga0062389_1005784362	3300004092	Bog Forest Soil	MSVTKMPGMVACTGACVVASENSSPEALLTLRLKTEAGDHYLLPLSERTTRQLQLVISEFNRTRDLLFVEERPPASATLQ*
Ga0062389_1047195002	3300004092	Bog Forest Soil	VAIRKLPGIVACTGAAVVASESSNPEAILTLKLKTESGDQVLLPLSERTTRQLQHVISEFNRTRDLLFVE
Ga0058899_114962982	3300004631	Forest Soil	AKGDRPVAITKLPGIVACNGALVVASESSNPEAILTLKLKTESGDQVLLPLSERTTRQLQHVISEFNRTRDLLFMEGRPSASATLQ*
Ga0062388_1019863571	3300004635	Bog Forest Soil	VAIRKLPGIVACTGAAVVASESSNPEAILTLKLKTESGDQVLLPLSERTTRQLQHVISEFNRTRDLLFVEQRPAASARLQ*
Ga0066388_1040850891	3300005332	Tropical Forest Soil	MSKVLPGIVACTGAIVITSENSSPEAALVLKLQTEGGLEVLLPLSERSARQVQKVIGEFNRSRDFLFNEDRPATQASLQ*
Ga0066388_1058049402	3300005332	Tropical Forest Soil	MPVTRMPGMVACTGAVVVASESSNPEALLTLTLRTEAGAQYLLPLSERTARQLQKVLAEFSRTRDLLWQDERTVGTLQ*
Ga0066388_1065720311	3300005332	Tropical Forest Soil	MPKLLPGIVGCLGAVVVASENSSPEVALVLKLRTESGQEVLLPLSERSARQVQKVLGEFNRSRDFLFGEDRPAAAATIQ*
Ga0070709_111055761	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPKLLPGIVGCTGAVVIASENSSPDAALVLKLRTEVGQEVLLPLSVQGAKQVQKVIGEFNRSRDFLVVEDRQAAEATLQ*
Ga0070709_116581352	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSVTRMPGMVACTGAIVVASESSNPEALLTLTLRTEAGAHYLLPLSERTARQLQKVLAEFSRTRDLLWQEQRTAGTLQ*
Ga0066903_1010195751	3300005764	Tropical Forest Soil	GIVGCTGAVVVASENSSPEADLVLKLRTAAGQEVLLPLSERAAKQVQKVIFEFNRSRDFLFAEERAAAQATLQ*
Ga0066903_1033667993	3300005764	Tropical Forest Soil	MPKLLPGIVACTGAVVIASENSSPEAALVLKLRTEAGEEVLLPLSVQGAKQVQKVISEFNRSRDFLFVEDKPDAVATLQ*
Ga0066903_1036837211	3300005764	Tropical Forest Soil	MPKLLPGIVGCTGAVVIASENSSPEAALVLKLRTEGGQEVFLPVSEVGARQVQKIIGEFNRSRDFLFVEDKPAARATLQ*
Ga0066903_1046145521	3300005764	Tropical Forest Soil	MPKFLPGIVGCTGAVVVASENSSPEAALVLKLRTEAGEEVLLPLSERATKQVQKVISEFNRSRDLLFVEDRPAAAAPLQ*
Ga0066903_1090446532	3300005764	Tropical Forest Soil	MPKLLPGIVGCTGAVVIASENSSPEAALVLKLRTESGQEVFLPISEMGARQVQKVIGEFNRRRDFLFVEERPAAEATLQ*
Ga0070766_103695951	3300005921	Soil	VAITKLPGIVACTGAVVVASESSNPEAILTLKLTTESGDPVLLPLSERTTRQLQQVISEFNRTRDLLFVQERRTASATLQ*
Ga0070766_109299252	3300005921	Soil	VAIRKLPGIVACTGGLVVASENSNPEAILTLKLKTESGDQVLLPLSERTTRQLQQVISEFNRTRDLLFVEERLVATLQ*
Ga0066789_102735132	3300005994	Soil	VPVTKLPGIVACTGAVVVASESSNPEALLTLKLTTESGDQVLLPLSERTTRQLQTVISEFNRTRDLLFVEERLSASATLQ*
Ga0070717_119899801	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPKFLPGIVGCSGAVVVASENSSPEAALVLKLRTEAGEEVLLPLSERATKQVQKVIGEFNRSRDLLVVEKRSAAQATLQ*
Ga0126384_121709861	3300010046	Tropical Forest Soil	RISMSKLLPGIVGCIGAVVIASENSSPEAALVLKLRTESGEEVLLPLSERAASQIEKVIGEFNRSRDFLFVEDRPVAEATLQ*
Ga0126372_114791441	3300010360	Tropical Forest Soil	MPKLLPGIVGCIGAVVFASENSSPEATLVLKLRTESGQEVLLPLSERSARQVQKVIGEFNRSRDFL
Ga0126379_123879421	3300010366	Tropical Forest Soil	MRLGARLPTLVAREQNDQVGRISMPKLLPGIVGCTGAVVIASENSSPEAALVLKLRTESGQEVFLPISEMGARQVQKVIGEFNRRRDFLFVEERPAAEATLQ*
Ga0136449_1005293513	3300010379	Peatlands Soil	MAITKLPGIVACTGAVVVASESSNPEAILTLKLTTESGDPVLLPLSERTTRQLQHVISEFNRTRDLLFVEERPSASATLQ*
Ga0136449_1041873202	3300010379	Peatlands Soil	VAITKLPGIVACSGAVVVASESSNPEAILTLKLTTESGDQVLLPLSERTTRQLQQVISEFNRTRDLLFVEERPSASARLQ*
Ga0134121_126396411	3300010401	Terrestrial Soil	VAITKLPGIVACTGAVVAASESSNPEAVLTLKLKTESGDQVLLPLSERTTRRLQHVISEFNRTRDLLFVAERPSALATLQ*
Ga0164309_102514772	3300012984	Soil	MPKFLPGIVGCSGAVVVASENSSPEAALVLKLTEAGEEVLLPLSERATKQVQKVIGEFNRSRDLLVVEKRSAAQATLQ*
Ga0182018_104900611	3300014489	Palsa	KGDRPVAITKLPGIVACTGAVVVASESSNPEAILTLKLTTESGDPVLLPLSERTTRQLQHVISEFNRTRDLLFVEERPAASARLQ*
Ga0182016_103171023	3300014493	Bog	MIVASENSNPEALLTLRLTTEEGQTVLLPLSERTTRQLAKVISEFNRTRDLLFVQERPSASATLQ*
Ga0182024_101999112	3300014501	Permafrost	VAITKLPAIVACTGAVVVASESSNPEAILTLKLTTESGDPVLLPLSERTTRQLQHVISEFNRTRDLLFVEERPAASARLQ*
Ga0182024_109533832	3300014501	Permafrost	VAITKLPGIVACTGGLVVASENSNPEAILTLKLKTESGDQVLLPLSEPTTRQLQQVISEFNRTRDLLFVEERPSASATLQ*
Ga0157376_127437991	3300014969	Miscanthus Rhizosphere	MPKLLPGIVGCTGAVVVASENSRPEAALVLKLRTEAGEEVLLPLSERGAKQVQKVIGVFNRSRDFLVVEDRQAAEATLQ*
Ga0132256_1030827802	3300015372	Arabidopsis Rhizosphere	MPKLLSGIVGCTGAVVIASENSSPEAALVVKLRTESGQEVFLPISEMGARQVQKVIGEFNRRRDFLFVEERPTAEATLQ*
Ga0182041_111792201	3300016294	Soil	MPKLLPGIVACTGAVVVASENSSPEAALVLKLRTQAGQEVLLPISEKGARQVQTVIAAFSRSRDLLFVEDTPAVAATLQ
Ga0182035_101872534	3300016341	Soil	MPKLLPGIVGCAGAVVIASENSSPEAALVLKLRTESGQEVFLPISEMGARQVQKVIGEFNRSRDFLFVEERPAAEATLQ
Ga0182035_109451871	3300016341	Soil	IVGCTGAVVVASENSSPEADLVLKLRTAAGQEVLLPLSERAAKQVQKVIFEFNRSRDFLFAEERSAAQATLQ
Ga0182035_118233861	3300016341	Soil	MPKLLPGIVGCTGAVVVASENSSPEAALVLKLRTKAGEEVFLPISEKGARQVQTVIAAFSHSRDLLFVEDTPAVAATL
Ga0182032_117319151	3300016357	Soil	MSKLLPGIVGCTGAVVVASENSSPEAALVLKLRTQAGQEVLLPISEKGARQVQTVIAAFSHSRDLLFVEDTPAVAATLQ
Ga0182034_106927392	3300016371	Soil	MSKLLPGIVACNGAVVVASENSSPEAALVLKLRTKAGQEVLLPISEKGARQVQTVIAAFSHSRDLLFVEDTPAVAATLQ
Ga0182034_112965261	3300016371	Soil	MPKLLPGIVGCIGAVVIASENSSPEAALVLKLRTESGKEVFLPISEMGARQVQKVIGEFNRRRDFLFVEERPTAEATLQ
Ga0182034_116789272	3300016371	Soil	FMPKLLPGIVGCTGAVVIASENSSPEAALVLKLQTEGGLEVLLPISELGAKQVQKVISVFARSRDLLFVESRPAAEATLQ
Ga0182040_107773361	3300016387	Soil	EERTFRWGKISMPKLLPGIVGCTGAVVVASENSSPEAALVLKLRTKAGEEVFLPISEKGARQVQTVIAAFSHSRDLLFVEDTPAVTATLQ
Ga0182040_108295711	3300016387	Soil	MSKLLPGIVGCTGAVVVASENSSPEAALVLKLRTQAGQEVLLPISEKGARQVQTVIAAFSRSRDLLFVEDTPAVVATLQ
Ga0182037_105348261	3300016404	Soil	MPKLLPGIVGCTGAVVIASENSSPEAALVLKLRTESGQEVFLPISEMGARQVQKVIGEFNRRRDFLFVERPAAESTLQ
Ga0182037_118906212	3300016404	Soil	MSRLLPGIVACTGAAVVASENSNPEAALVLNLRTEGGVEVLLPISEAGARQVQKVIGVFNRSRDLLFVEERPAAEATLQ
Ga0182039_114732722	3300016422	Soil	MPKLLPGIVGCAGAVVIASENSSPEAALVLKLRTESGQEVFLPISEVGAKQVQKVIGEFNRSRDFLFVEERPAAEATLQ
Ga0182039_120188231	3300016422	Soil	LGTTVRTNKEQQKVDGPVAITKLPGIVACTGAPVVASESSNPEALLTLSLKTESGDQVLLPLSERATRQLQRVISEFNRTRDLLFVEERPCASVSLQ
Ga0182038_101846801	3300016445	Soil	MSKLLPGIVGCTGAVVVASENSSPEAALVLKLRTAAGQEVLLPLSERAAKQVQKVIFEFNRSRDFLFAEERAAAQATLQ
Ga0182038_104569072	3300016445	Soil	MSKLLPGIVGCTGAVVVASENSSPEAALVLKLRTEAGEEVLLPISEKGARQVQMVIGEFNRSRDLLFVEDTPAVAATLQ
Ga0182038_107149451	3300016445	Soil	MPKLLPGIIGCTGAVVVASENSSPEAALVLKLRTKAGQEVLLPISEKGARQVQTVIAAFSHSRDLLFVEDTPVVAA
Ga0187765_112259671	3300018060	Tropical Peatland	GAVVVASENSSPEAALVLKLRTEAGQEVLLPLSEQATKQVQTVIGEFNRSRDLLVVEMQSAAQATLQ
Ga0210387_112608572	3300021405	Soil	QKRNITKGVRPVAITKLPGIVACTGGLVVASENSNPEAILTLKLKTESGDQVLLPLSERTTRQLQQVISEFNRTRDLLFVEERPSASATLQ
Ga0210383_108797121	3300021407	Soil	VAITKLPGIVACTGAVVVASESSNPTLKLTTESGDPVLLPLSERTTRQLQHVISEFNRTRDLLFVEERPAASARLQ
Ga0210398_104115152	3300021477	Soil	VAIRKLPGIVACTGGLVVASENSNPEAILTLKLKTESGDQVLLPLSERTTRQLQQVISEFNRTRDLLFVEERLVATLQ
Ga0210402_106788703	3300021478	Soil	MLPTSVEQKANIHVGKISMPTLLPGIVGCAGAVVIASENSSPEAALVLKLRTEAGLEVLLPISERGAKQVQTVISEFNRSRDMLFLEERPAVAATLQ
Ga0210402_107305372	3300021478	Soil	MPKLLPGIIGCTGAVVIASENASPEAALVLKLRTEGGEEVLLPLSERGAKQVQKVIREFNRSRDLLFVEERQAAEATLQ
Ga0210402_107583301	3300021478	Soil	MPKLLPGIVGCTGAVVIASESASPEAALVLKLRTEGGEEVLLPLSERGAKQVQRVIGEFNRSRDLLFVDERQAAEETLQ
Ga0210402_115077772	3300021478	Soil	ASESSNPEATLTLKLTTESGDQVLLPLSKRTTRQLQQIISEFNRTRDLLFVTERPAASATLQ
Ga0210402_118142822	3300021478	Soil	VPITKLPGIVACTGAVVVASESSNPEAILTLKLKTESGDQVLLPLSERTTRQLQQVICEFNRTRDLLFVAERPSAL
Ga0242660_12532272	3300022531	Soil	EHSVAITKLPGIVACTGAVVLASESSNPEAILTLKLTTESGVQVLLPLSERTTRQLQLVISEFNRTRDLLFVEESPVASATLQ
Ga0242672_11464262	3300022720	Soil	MPKLLPGIVGCAGVVVIASENSSPEAAVVLRLRTEAGEEVLLPISERAAKQFQKVISEFNRSRDLLFVEERPAAAATLQ
Ga0207699_113372282	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSVTRMPGMVACTGAIVVASESSNPEALLTLTLRTEAGAHYLLPLSERTARQLQKVLAEFSRTRDLLWQEQRTAGTLQ
Ga0209890_102297962	3300026291	Soil	VPVTKLPGIVACTGAVVVASESSNPEALLTLKLTTESGDQVLLPLSERTTRQLQTVISEFNRTRDLLFVEERLSASATLQ
Ga0311339_107063331	3300029999	Palsa	TGAVVVASENSNPEAILTLKLKTESGDQILLPLSERTTRQLQQVISEFNRTRDLLFVEERPSASATLQ
Ga0311338_116645751	3300030007	Palsa	VTITKLPGIAACTGAVVVASENSNPEAILTLKLKTESGDQILLPLSERTTRQLQQVISEFNRTRDLLFVEERPSASATLQ
Ga0302180_104744422	3300031028	Palsa	MTVTKLAGIVACTGAVVVASESSSPEALLTLKLKTEGGDQYLLPLSERTTRQLQQVISEFNRTRDLLFVEERPAASATLQ
Ga0170824_1057063361	3300031231	Forest Soil	MPKLLPGIVGCAGAVVIASENSSPEAALVLKLRTESGQEVFLPISEVGARQVQKVIGEFNRGRDFLFVEEKPAAEVTLQ
Ga0302324_1031618301	3300031236	Palsa	LAGIVACTGAVIVASENSSPEALLTLKLKTEGGDQYLLPLSERTTRQLQQVISEFNRTRDLLFVEERPAASATLQ
Ga0170819_171793071	3300031469	Forest Soil	MPKLLPGIVGCAGAVVIASENSSPEAALVLKLRTESGQEVFLPISEVGARQVQKVIGEFNRGRDFLFVEERPAAEATLQ
Ga0170818_1017011121	3300031474	Forest Soil	PGIVGCAGAVVIASENSSPEAALVLKLRTESGQEVFLPISEVGARQVQKVIGEFNRGRDFLFVEERPAAEATLQ
Ga0310915_104268442	3300031573	Soil	MSKLLPSIVGCTGAVVVASENSSPEAALVLKLRTKAGQEVLLPISEKGARQVQTVIAAFSHSRDLLFVEDTPAVAATLQ
Ga0310915_108949403	3300031573	Soil	IVGCTGAVVVASENSSPEAALVLKLRTAAGQEVLLPLSERAAKQVQKVIFEFNRSRDFLFAEERSAAQATLQ
Ga0306917_105913491	3300031719	Soil	MPKLLPGIVGCTGAVVVASENSSPEAALVLKLRTKAGEEVFLPISEKGARQVQTVIAAFSHSRDLLFVEDTPAVAATLQ
Ga0306917_114602391	3300031719	Soil	LPGIVGCIGAVVIASENSSPEAALVLKRRTESGQEVFLPISEMGARQVQKVIGEFNRRRDFLFVEERPAAEATLQ
Ga0306918_110957822	3300031744	Soil	MSKLLPGIVGCTGAVVVASENSSPEAALVLKLRTAAGQEVLLPLSERAAKQVQKVIFEFNRSRDFLFAEERSAAQATLQ
Ga0310917_102092761	3300031833	Soil	ERTFRWGKISMPKLLPGIVGCNGAVVVASENSSPEAALVLKLRTEAGQEVLLPISEKGARQVQTVIAAFSHSRDLLFVEDTPAVAATLQ
Ga0306919_107490042	3300031879	Soil	MSKLLPSIVGCTGAVVVASENSSPEAALVLKLRTKAGQEVLLPISEKGARQVQTVIAAFSRSRDLLFVEDTPAVAATL
Ga0306919_112317682	3300031879	Soil	MPKLLPGIVACTGAVVVASENSSPEAALVLKLRTQAGQEVLLPISEKGARQVQTVIAAFSRSRDLLFVEDTPAVVATLQ
Ga0306925_104763942	3300031890	Soil	MPKLLPGIVGCTGAVVVASENSSPEAALVLKLRTAAGQEVLLPLSERAAKQVQKVIFEFNRSRDFLFAEERSAAQATLQ
Ga0306925_107745672	3300031890	Soil	MPKLLPGIVACTGAVVVASENSSPEAALVLKLRTQAGQEVLLPISEKGARQVQTVIAAFSRSRDLLFVEERPAVAATLQ
Ga0306925_110651712	3300031890	Soil	MPKLLPGIVGCTGAVVIASENSSPEAALVLKLRTESGQEVFLPISEMGARQVQKVIGEFNRRRDFLFVEERSTAEATLQ
Ga0306925_121731701	3300031890	Soil	MPKFLPGIVGCTGAVVVASENSSPEAALVLKLRTEAGEEVLLPLSERATKQVQKVISEFNRSRDLLFVEDRPAAAAPLQ
Ga0318520_102442193	3300031897	Soil	MSKLLPGIVGCTGAVVVASENSSPEADLVLKLRTAAGQEVLLPLSERAAKQVQKVIFEFNRSRDFLFAEERAAAQATLQ
Ga0306923_103702794	3300031910	Soil	MSKLLPGIVGCTGAVVVASENSSPEAALVLKLRTKAGQEVLLPISEKGARQVQTVIAAFSRSRDLLFVEDTPAVAATLQ
Ga0306923_106322571	3300031910	Soil	NEERTFRWGKISMPKLLPGIVGCTGAVVVASENSSPEAALVLKLRTKAGEEVFLPISEKGARQVQTVIAAFSHSRDLLFVEDTPAVAATLQ
Ga0306923_109693663	3300031910	Soil	MPKLLPGIIGCTGAVVVASENSSPEAALVLKLRTAAGQEVLLPLSERAAKQVQKVIFEFNRSRDFLFAEERAAAQATLQ
Ga0306923_120600932	3300031910	Soil	MPKLLPGIVGCTGAVVIASENSSPEAALVLKLRTESGQEVFLPISEMGARQLQKVIGEFNRRRDFLFVEERPTAEATLQ
Ga0306921_115556221	3300031912	Soil	MSKLLPGIVGCTGAVVVASENSSPEADLVLKLRTAAGQEVLLPLSERAAKQVQKVIFEFNRSRDFLFAEERAA
Ga0306921_125066102	3300031912	Soil	MPKLLPGIVGCTGAVVIASENSSPEAALVLKLRTESGQEVFLPISEMGARQIGEFNRRRDFLFVEERPTAEATLQ
Ga0310916_104336562	3300031942	Soil	KAPVSCRTDSEQTLRGISMSKLLPGIVGCTGAVVVASENSSPEAALVLKLRTAAGQEVLLPLSERAAKQVQKVIFEFNRSRDFLFAEERSAAQATLQ
Ga0310916_105479001	3300031942	Soil	SENSSPEAALVLKRRTESGQEVFLPISEMGARQIGEFNRRRDFLFVEERPTAEATLQ
Ga0310916_112668421	3300031942	Soil	MPKLLPGIIGCTGAVVVASENSSPEAALVLKLRTKAGQEVLLPISEKGARQVQAVIAAFSHSRDLLFVE
Ga0310913_107210911	3300031945	Soil	GENLPMRLGARLPTLVAREQNDQVGRISMPKLLPGIVGCTGAVVIASENSSPEAALVLKRRTESGQEVFLPISEMGARQVQKVIGEFNRRRDFLFVEERPAAEATLQ
Ga0310910_107814823	3300031946	Soil	MPKLLPGIVGCTGAVVIASENSSPEAALVLKLRTESGQEVFLPISEMGARQVQKVIGEFNRRRDFLFVEERPAAEATLQ
Ga0310909_111551131	3300031947	Soil	MSKLLPGIVACNGAVVVASENSSPEAALVLKLRTKAGQEVLLPISEKGARQVQTVIAAFSHSRDLLFVEDTPVVAATLQ
Ga0310909_114410981	3300031947	Soil	MSKLLPGIVACTGAIVVASENSSPEAALVLKLRTQAGQEVLLPISEKGARQVQTVIAAFSRSRDLLFVEDTPAVVATLQ
Ga0306926_106021521	3300031954	Soil	MSKLLPGIVACNGAVVVASENSSPEAALVLKLRTKAGQEVLLPISEKGARQVQTVIAAFSRSRDLLFVEDTPAVAATLQ
Ga0306926_107696281	3300031954	Soil	ERTFRWGKISMPKLLPGIVGCTGAVVVASENSSPEAALVLKLRTKAGEEVFLPISEKGARQVQTVIAAFSHSRDLLFVEDTPAVAATLQ
Ga0306922_115202921	3300032001	Soil	TGAVVIASENSSPEAALVLKLRTESGQEVFLPISEMGARQVQKVIGEFNRRRDFLFVEERPAAEATLQ
Ga0306924_116527332	3300032076	Soil	MSKLLPGIAECTGAVVVASENSSPEASLVLKLRTEAGQEVLLPFSERATKQVQKVIGVFNRSRDLLVVENRSAVQATLQ
Ga0306924_121193551	3300032076	Soil	MPKLLPGIVGCTGAVVVASENSSPEAALVLKLRTKAGQEVLLPITEKGRQVQTVIAAFSRSRDLLFVEDTPAVAATLQ
Ga0318518_106612281	3300032090	Soil	MPKLLPGIVGCTGAVVIASENSSPEAALVLKLRTESGQEVFLPISEMGARQVQKVIGEFNRRRDFLFVEE
Ga0311301_114915062	3300032160	Peatlands Soil	VAITKLPGIVACSGAVVVASESSNPEAILTLKLTTESGDQVLLPLSERTTRQLQQVISEFNRTRDLLFVEERPSASARLQ
Ga0306920_1008153391	3300032261	Soil	GENVPMRLGARLPTLVAREQNEQVGRISMPKLLPGIVGCTGAVVIASENSSPEAALVLKLRTESGKEVFLPISEMGARQVQKVIGEFNRRRDFLFVEERPAAEATLQ
Ga0306920_1015015801	3300032261	Soil	MSKLLPGIVGCTGAVVVASENSSPEAALVLKLRTKAGQEVLLPISEKGARQVQTVIAAFSHSRDLLFVEDTPAVAATLQ
Ga0348332_101067411	3300032515	Plant Litter	GGCPVAITKLPGIVACTGAVVVASESSNPEAILTLKLTTESGDPVLLPLSERTTRQLQHVISEFNRTRDLLFVEERPAASARLQ
Ga0335081_103815263	3300032892	Soil	VPITKLHGIVACTGAVVVASENSNPEAILTLKLKTESGDQVLLPLSERTTRQLQKIIAEFNRTRDLLFLEERPAALATLQ
Ga0335081_106710471	3300032892	Soil	MPKLLPGIVGCTGAVVVASENSSPEAALVLKLRTELGQEVLLPLSGRGAKQVQKVIGEFNRSRDFLLVEDRQAAKATLQ
Ga0335081_112257292	3300032892	Soil	MPKLLPGIVGCTGAVVIASENSSPEAALVLKLRTESGQEVLLPISEVGTRQVQKVIGEFNRSRDFLFAEDRSAVEATLQ
Ga0310914_105018592	3300033289	Soil	MSKLLPSIVGCTGAVVVASENSSPEAALVLKLRTKAGQEVLLPISEKGARQVQTVIAAFSQSRDLLFVEDTPAVAATLQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084891

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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