Metagenome Family F084892

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084892
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	41 residues
Representative Sequence	VKKIRTVGEVSLSALEDQWQRDATAAAIAGARGVVQMDGPIP
Number of Associated Samples	63
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.89 %
% of genes near scaffold ends (potentially truncated)	99.11 %
% of genes from short scaffolds (< 2000 bps)	91.96 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.679 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.071 % of family members)
Environment Ontology (ENVO)	Unclassified (79.464 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.714 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.71% β-sheet: 0.00% Coil/Unstructured: 64.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13479	AAA_24	25.89
PF12728	HTH_17	2.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	26.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	6.25 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	6.25 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	1.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02IOWWJ	Not Available	508	Open in IMG/M
3300005332\|Ga0066388_101054172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1370	Open in IMG/M
3300005332\|Ga0066388_103216091	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300005332\|Ga0066388_107166656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300005713\|Ga0066905_102183308	Not Available	516	Open in IMG/M
3300005764\|Ga0066903_100155021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3302	Open in IMG/M
3300005764\|Ga0066903_100855399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1637	Open in IMG/M
3300005764\|Ga0066903_101447513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1294	Open in IMG/M
3300005764\|Ga0066903_105463083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	670	Open in IMG/M
3300010043\|Ga0126380_10797460	Not Available	772	Open in IMG/M
3300010046\|Ga0126384_10139414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	1853	Open in IMG/M
3300010046\|Ga0126384_11389736	Not Available	654	Open in IMG/M
3300010047\|Ga0126382_10507027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	971	Open in IMG/M
3300010360\|Ga0126372_11985423	Not Available	628	Open in IMG/M
3300010361\|Ga0126378_12604787	Not Available	578	Open in IMG/M
3300010362\|Ga0126377_11024382	Not Available	892	Open in IMG/M
3300010376\|Ga0126381_102485785	Not Available	742	Open in IMG/M
3300010376\|Ga0126381_104484277	Not Available	539	Open in IMG/M
3300012923\|Ga0137359_11712956	Not Available	516	Open in IMG/M
3300016270\|Ga0182036_10437723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1026	Open in IMG/M
3300016270\|Ga0182036_10833195	Not Available	753	Open in IMG/M
3300016270\|Ga0182036_11817022	Not Available	516	Open in IMG/M
3300016294\|Ga0182041_10248562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1446	Open in IMG/M
3300016294\|Ga0182041_11268117	Not Available	674	Open in IMG/M
3300016319\|Ga0182033_10044924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2946	Open in IMG/M
3300016319\|Ga0182033_10581971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	971	Open in IMG/M
3300016319\|Ga0182033_11117330	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300016319\|Ga0182033_11350385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	641	Open in IMG/M
3300016341\|Ga0182035_10653899	Not Available	912	Open in IMG/M
3300016357\|Ga0182032_10782635	Not Available	805	Open in IMG/M
3300016371\|Ga0182034_10003594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8032	Open in IMG/M
3300016371\|Ga0182034_10143608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1782	Open in IMG/M
3300016371\|Ga0182034_10404746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1120	Open in IMG/M
3300016371\|Ga0182034_12056649	Not Available	504	Open in IMG/M
3300016387\|Ga0182040_11002132	Not Available	696	Open in IMG/M
3300016387\|Ga0182040_11469356	Not Available	578	Open in IMG/M
3300016404\|Ga0182037_10077534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2322	Open in IMG/M
3300016404\|Ga0182037_10107162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2025	Open in IMG/M
3300016422\|Ga0182039_10913834	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300016422\|Ga0182039_11004468	Not Available	748	Open in IMG/M
3300016422\|Ga0182039_11372055	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300016445\|Ga0182038_10952597	Not Available	758	Open in IMG/M
3300021560\|Ga0126371_11236323	All Organisms → cellular organisms → Bacteria → Proteobacteria	882	Open in IMG/M
3300021560\|Ga0126371_11868372	Not Available	721	Open in IMG/M
3300021560\|Ga0126371_13061799	Not Available	566	Open in IMG/M
3300021560\|Ga0126371_13333614	Not Available	543	Open in IMG/M
3300031561\|Ga0318528_10121941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1378	Open in IMG/M
3300031573\|Ga0310915_10183356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1459	Open in IMG/M
3300031573\|Ga0310915_10582477	Not Available	793	Open in IMG/M
3300031713\|Ga0318496_10389373	Not Available	770	Open in IMG/M
3300031719\|Ga0306917_10378525	Not Available	1103	Open in IMG/M
3300031719\|Ga0306917_10922341	Not Available	683	Open in IMG/M
3300031719\|Ga0306917_11254566	Not Available	574	Open in IMG/M
3300031724\|Ga0318500_10005052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4177	Open in IMG/M
3300031724\|Ga0318500_10344108	Not Available	736	Open in IMG/M
3300031744\|Ga0306918_10324056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1191	Open in IMG/M
3300031744\|Ga0306918_10357217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1134	Open in IMG/M
3300031744\|Ga0306918_10358472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1132	Open in IMG/M
3300031744\|Ga0306918_11210144	Not Available	583	Open in IMG/M
3300031763\|Ga0318537_10015599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2606	Open in IMG/M
3300031765\|Ga0318554_10231570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1052	Open in IMG/M
3300031771\|Ga0318546_10152195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1560	Open in IMG/M
3300031777\|Ga0318543_10507337	Not Available	540	Open in IMG/M
3300031792\|Ga0318529_10149946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1072	Open in IMG/M
3300031792\|Ga0318529_10330317	Not Available	710	Open in IMG/M
3300031796\|Ga0318576_10016505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2851	Open in IMG/M
3300031797\|Ga0318550_10305383	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300031799\|Ga0318565_10416708	Not Available	651	Open in IMG/M
3300031819\|Ga0318568_11061603	Not Available	500	Open in IMG/M
3300031860\|Ga0318495_10200593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	898	Open in IMG/M
3300031890\|Ga0306925_11443038	Not Available	676	Open in IMG/M
3300031894\|Ga0318522_10206039	Not Available	745	Open in IMG/M
3300031896\|Ga0318551_10868829	Not Available	526	Open in IMG/M
3300031910\|Ga0306923_10293143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1859	Open in IMG/M
3300031910\|Ga0306923_10525302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1336	Open in IMG/M
3300031910\|Ga0306923_11281183	All Organisms → cellular organisms → Bacteria → Proteobacteria	778	Open in IMG/M
3300031910\|Ga0306923_11345404	All Organisms → cellular organisms → Bacteria → Proteobacteria	755	Open in IMG/M
3300031910\|Ga0306923_11425657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	728	Open in IMG/M
3300031912\|Ga0306921_11485628	Not Available	741	Open in IMG/M
3300031941\|Ga0310912_10947842	Not Available	661	Open in IMG/M
3300031942\|Ga0310916_10190664	Not Available	1711	Open in IMG/M
3300031942\|Ga0310916_10945019	Not Available	721	Open in IMG/M
3300031945\|Ga0310913_10479031	Not Available	884	Open in IMG/M
3300031945\|Ga0310913_11247621	Not Available	516	Open in IMG/M
3300031947\|Ga0310909_11334616	Not Available	576	Open in IMG/M
3300031954\|Ga0306926_10139572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2999	Open in IMG/M
3300031954\|Ga0306926_10648878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1285	Open in IMG/M
3300031954\|Ga0306926_10835445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1108	Open in IMG/M
3300032001\|Ga0306922_11956054	Not Available	572	Open in IMG/M
3300032001\|Ga0306922_12304228	Not Available	516	Open in IMG/M
3300032025\|Ga0318507_10117276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1121	Open in IMG/M
3300032025\|Ga0318507_10296199	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300032035\|Ga0310911_10400043	Not Available	794	Open in IMG/M
3300032035\|Ga0310911_10429803	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M
3300032042\|Ga0318545_10061373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1284	Open in IMG/M
3300032042\|Ga0318545_10076689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	1154	Open in IMG/M
3300032043\|Ga0318556_10557782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300032054\|Ga0318570_10062038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1575	Open in IMG/M
3300032060\|Ga0318505_10351909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	696	Open in IMG/M
3300032076\|Ga0306924_11443116	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300032076\|Ga0306924_11838241	Not Available	630	Open in IMG/M
3300032089\|Ga0318525_10390691	Not Available	713	Open in IMG/M
3300032090\|Ga0318518_10234760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	941	Open in IMG/M
3300032094\|Ga0318540_10138297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1163	Open in IMG/M
3300032094\|Ga0318540_10371699	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300032261\|Ga0306920_101095488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1155	Open in IMG/M
3300032261\|Ga0306920_102567692	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300033289\|Ga0310914_10799584	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300033289\|Ga0310914_10885502	Not Available	792	Open in IMG/M
3300033289\|Ga0310914_11063619	Not Available	710	Open in IMG/M
3300033289\|Ga0310914_11516209	Not Available	574	Open in IMG/M
3300033290\|Ga0318519_11046593	Not Available	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.86%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	79.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_04578180	2170459005	Grass Soil	MGAMMKKPRTIGEVSLSALEGQWQRDATAAAIAGARGVIRDG
Ga0066388_1010541721	3300005332	Tropical Forest Soil	MGVMKKARAIGQVSLSAIEDQWQRDATAAAIAGARGVVQMDGPI
Ga0066388_1032160911	3300005332	Tropical Forest Soil	VKKIRTVGEVSLSALEDQWQRDATAAAIAGARGVVQMDGPIP
Ga0066388_1071666561	3300005332	Tropical Forest Soil	MKRASCTIGQVSLSALEDEWQRRATAAAIAGARGVVQKDGP
Ga0066905_1021833082	3300005713	Tropical Forest Soil	MMKRKTRTIGEVSFSALEDQWRRDATAAAIAGARGVVQMDGPIPPGTP
Ga0066903_1001550211	3300005764	Tropical Forest Soil	MKKIRTIGEISLSALEDQWQRDATTAAIAAGRGVIQMDGPIPPGTP
Ga0066903_1008553991	3300005764	Tropical Forest Soil	MKKASRTIGRVSLSALEDEWQRRATAAAIAGARGVVQKDGPI
Ga0066903_1014475131	3300005764	Tropical Forest Soil	MKKIRHVGQVSLSAIEDQWQRDATAAAIAAARGVIR
Ga0066903_1054630831	3300005764	Tropical Forest Soil	MRKTRAIGEVSISKVEDIWQHKATDAAIAAARGVVQMDGPIP
Ga0126380_107974601	3300010043	Tropical Forest Soil	VGIVKKKIHTVGEVSLSNLEDQWQRDATAAAIAAAR
Ga0126384_101394141	3300010046	Tropical Forest Soil	MGVMKVTIGQVSLCVLEKDWQRRATAAAIAGARGVIQADGPIPP
Ga0126384_113897362	3300010046	Tropical Forest Soil	MKKSRTIGEVSLGAIEDAWQRRATAAAIAAARGVVKA
Ga0126382_105070271	3300010047	Tropical Forest Soil	MRTIGIPTASALEDHWQRRSTAAAIEAARKVVRVDCVIPPG
Ga0126372_119854232	3300010360	Tropical Forest Soil	VKRPRAIGEVSLSALEDQWQRDSTVAAIAGARGVV
Ga0126378_126047872	3300010361	Tropical Forest Soil	VGVVRKARAIGEVSLSVLEDRWQRDATAAAIAAARGVVQMDGPV
Ga0126377_110243822	3300010362	Tropical Forest Soil	MSKIRNPIGQVSLSAIEDWWQRAATAAAIAAARGVVQMDGPIPPAT
Ga0126381_1024857851	3300010376	Tropical Forest Soil	VGVVKKMRSVGEVSPSAIEDIWQRDATSAAIAGARGVVQVGGPI
Ga0126381_1044842771	3300010376	Tropical Forest Soil	MKKARAIGEVSLSVLEDQWQRDATAAAIAGARGVVQMDGPI
Ga0137359_117129561	3300012923	Vadose Zone Soil	MRKPRTIGQVSLSALEDQWQRDATAAAIAAARGVVQMDGPIPP
Ga0182036_104377233	3300016270	Soil	MGVVRKIRAVGEISLSAMEDQWQRDATAAAIAGARGVVQMD
Ga0182036_108331952	3300016270	Soil	MRKVRTIGVISETAIEDEWQRRATAAAIAAARDVVR
Ga0182036_118170222	3300016270	Soil	MGVVKKKIHTIGEASLSALEDQWQHDATAAAIAAARGV
Ga0182041_102485623	3300016294	Soil	MGALMKKLRTVSEVSLSALEDQWQRQATAAAIEAARGIV
Ga0182041_112681173	3300016294	Soil	MKRASHIGQVSLSALENDWQRRATAAAITGARGVIRVDGPI
Ga0182033_100449245	3300016319	Soil	MKKMRTVGEVSLSAIEDQWQRDATAAAIAGARGVV
Ga0182033_105819711	3300016319	Soil	VKKIRAVGQVSLSALEDQWQRDGVSAALAAMRRVVQ
Ga0182033_111173301	3300016319	Soil	MGTLMRKIRTIGIVSETALEDEWQRRATAAAIEAARGVVQMDGPIP
Ga0182033_113503852	3300016319	Soil	MMKRKTRTMGEVSLSALEDRWRRDATAAAIAGARGVVQMDGPIPPGT
Ga0182035_106538991	3300016341	Soil	VGAVSRIRNPIGQVSLSVIEDQWQRDATAAAIAAARG
Ga0182032_107826352	3300016357	Soil	MTMGRKIKTVGEVSLSALEDQWQQNATAAAIAGARGV
Ga0182034_1000359413	3300016371	Soil	VKKKINKIGEVSLSALEDQWQRDATAAAIAAARGVVQMDGP
Ga0182034_101436081	3300016371	Soil	MKKMRTVGQISPSAIEDQWQRDATAAAIEAARGVVKLDG
Ga0182034_104047463	3300016371	Soil	VKKMRSVAEVSLSAIEDQWQRDATAAAIAGARGVVQMGGPI
Ga0182034_120566492	3300016371	Soil	MGTLMKKARTIGMVSETALEDEWQRRATAAAIEAARG
Ga0182040_110021321	3300016387	Soil	VKKKTHTIGEVSLSALADQWQRDATAAAITAMRGVVQMDGPIP
Ga0182040_114693562	3300016387	Soil	MKKARTIGMVSETALEDEWQRRATAAAIEAARGVVKLDGPIP
Ga0182037_100775345	3300016404	Soil	VGVVKKKKTRTVGEVSLSALEDQWQRDATASAIAAIRGV
Ga0182037_101071621	3300016404	Soil	MKKARTVGEVSLSVLEDQWQRRATAAAIEAARGVVKLDGP
Ga0182039_109138341	3300016422	Soil	MRTTRIVGAVSGTALEDEWLRRATAAAIEAARGVITLDGPIPP
Ga0182039_110044681	3300016422	Soil	VKKIRAIGQVSLSALEDQWQRDATATAITAMRGVVQM
Ga0182039_113720552	3300016422	Soil	VKKKKTRTIGEVSLSVLEDQWQRNSTAAAIEAARSVIQMDGPIPP
Ga0182038_109525971	3300016445	Soil	VGVVKKVRAIGEVSLSVLEDQWQRNSTAAAIEAARSVIQMDGPIP
Ga0126371_112363233	3300021560	Tropical Forest Soil	VGVVKKNHTVGEASSSAIEDIWQRQATAAAIAAARGVVQM
Ga0126371_118683721	3300021560	Tropical Forest Soil	VKKKARTIGEVSLSALEDQWQRDATAAAITAMRGVVQMDGPIPPGTP
Ga0126371_130617991	3300021560	Tropical Forest Soil	MRKIRTIGEVTISALEDQWQRDATTAAIAAARGVVQIDGPI
Ga0126371_133336141	3300021560	Tropical Forest Soil	MKKIRNPIGRVSLSALEDQWQRDATAAAIAAARGVVQMDGPIPPVRPSVG
Ga0318528_101219413	3300031561	Soil	MKKARTVGEVSLSVLEDQWQRRATAAAIEAARGVVKLDGPIPP
Ga0310915_101833561	3300031573	Soil	MKKMRTVGQISPSAIEDQWQRDATAAAIEAARGVVKLDGPIPP
Ga0310915_105824773	3300031573	Soil	MVALMKKLRTVGQVSPSALEDEWQRRATAAAIEAARG
Ga0318496_103893732	3300031713	Soil	MRTTRIVGMVSETALEDEWLRRATAAAIAAARDVIKLDGPI
Ga0306917_103785254	3300031719	Soil	MSNKKIKAVGEVSLSALDDVWQRDATAAAIAGARGVVQIGGPVPPGT
Ga0306917_109223412	3300031719	Soil	MRKIRTIGVISETALEDEWQRRATAAAIEAARGVVKLD
Ga0306917_112545661	3300031719	Soil	MGTLMKKARTIGMVSETALEDEWQRRATAAAIEAARGVVQMG
Ga0318500_100050521	3300031724	Soil	VKKKINKIGEVSLSALEDQWQRDATAAAIAAARGVVQ
Ga0318500_103441082	3300031724	Soil	VGAVSRIRNPIGQVSLSVIEDQWQRDATAAAIAAARGVVHMDGPI
Ga0306918_103240561	3300031744	Soil	MKKMRTVGQISPSAIEDQWQRDATAAAIEAARGVVKL
Ga0306918_103572173	3300031744	Soil	MGVVRKKTHTIGEVSLSALADQWQRDATAAAITAMRGVVQMDGP
Ga0306918_103584721	3300031744	Soil	MKKTRTIGEASLSVLEDQWQRDATAAAIAGMRGVVQMDGPI
Ga0306918_112101442	3300031744	Soil	MKKMRTVGVVSETTIEDIWQRRATAAAIEAARNVVTLGGAVP
Ga0318537_100155995	3300031763	Soil	VKKKTHTIGEVSLSALADQWQRDATAAAITAMRGVVQMDGPI
Ga0318554_102315703	3300031765	Soil	MKKARTVGEVSLSVLEDQWQRRATAAAIEAARGVV
Ga0318546_101521951	3300031771	Soil	MRKVRTVGMVSEAALEDEWQRRATAAAIEAARGVN
Ga0318543_105073372	3300031777	Soil	VKKKTHTIGEVSLSALADQWQRDATAAAITAMRGVVQ
Ga0318529_101499461	3300031792	Soil	VKKKTHTIGEVSLSALADQWQRDATAAAITAMRGVVQMDGPIPP
Ga0318529_103303172	3300031792	Soil	VGIVKKKVRTIGEVSISALEDQWQRDATAAAIAAARGVVQMDGPI
Ga0318576_100165056	3300031796	Soil	MKKMRTVGEVSLSAIEDQWQRDATAAAIAAARGVVQMGGPIPPG
Ga0318550_103053832	3300031797	Soil	MGAVMKRSRVIGQASPSAIEDAWQRRATAAAIEAARDVIKLDGPIPPDTAVG
Ga0318565_104167081	3300031799	Soil	MGTLMKKARTIGMVSETALEDEWQRRATAAAIEAAR
Ga0318568_110616031	3300031819	Soil	MKKLRTVGQVSLSALEDDWQRRATAAAIEAARGVI
Ga0318495_102005931	3300031860	Soil	MGTLMRKIRTIGIVSETALEDEWQRRATAAAIEAARGVVQMDGP
Ga0306925_114430382	3300031890	Soil	MKRMARTIGQVSLSALEDEWQRRATAAAIDGARGVVQVGGP
Ga0318522_102060392	3300031894	Soil	MGVVKKKTHTIGEVSLSALGDQWQRDATAAAITAMR
Ga0318551_108688292	3300031896	Soil	VTMSNKKIKAVGEVSLSALDDVWQRDATAAAIAGARGVV
Ga0306923_102931434	3300031910	Soil	VGVVKKKTHTIGEVSLSALADQWQRDATAAAITAM
Ga0306923_105253021	3300031910	Soil	VGVVKKVRAVGEVSLAALEDQRQRDATAAAIAAARGVVQLD
Ga0306923_112811831	3300031910	Soil	MRTTRIVGAVSGTAHEDERVRRATAAAHAAARGGNTL
Ga0306923_113454041	3300031910	Soil	MRTIRTVGMVSETALEDEWQRRATAAAIEAARGVITL
Ga0306923_114256572	3300031910	Soil	MKKARTIGMVSETALEDEWQRRATAAAIEAARGVVKFDGP
Ga0306921_114856282	3300031912	Soil	MTMAKLRTIGTVSLATLEDQWQRDATAAAIAGARGVIRNGGP
Ga0310912_109478421	3300031941	Soil	MKKLRTVGQVSLSALEDDWQRRATAAAIEAARGVIKLDAPIPPGTP
Ga0310916_101906641	3300031942	Soil	VKKKTHTIGEASLSALEDQWQHDATAAAIAAARGVVQMDGPIPPGTP
Ga0310916_109450191	3300031942	Soil	MTRKIKRIGEVSLSALEDQWQRDATAAAVAGARGVVQVSGPVPPGT
Ga0310913_104790313	3300031945	Soil	MKKPRAIGEVSLSAIEDIWQRQATAAAIEGARSIVGGPIPAGT
Ga0310913_112476212	3300031945	Soil	MKKARTVGEVSLSVLEDQWQRRATAAAIEAARGVVKLDGPIPPAV
Ga0310909_113346161	3300031947	Soil	MKKMRTVGVVSETTIEDIWQRRATAAAIEAARNVVTLGGAVPPAT
Ga0306926_101395721	3300031954	Soil	MKKKVRTIGEVSLSALEDQWQRDATAAAIAGARGVIQLDG
Ga0306926_106488783	3300031954	Soil	MRTTRTVGMVSETALEDEWLRRATAAAIEAARGVITLGGPI
Ga0306926_108354451	3300031954	Soil	MKKLRTIGQVSQSALEDVRQWQATAAAVAAARGVIRDGVIPPNT
Ga0306922_119560541	3300032001	Soil	VKKKKTHTIGEVSLSALGDQWQRDATAAAITAMRGVVQMDGPIPPG
Ga0306922_123042281	3300032001	Soil	MGTLMRKIRTIGVISETALEDEWQRRATAAAIEAARGVVQMDGPIPPG
Ga0318507_101172761	3300032025	Soil	VGVVKKMRNVGEVSPSAIEDQWQRDATAAAIAGARGVVQ
Ga0318507_102961991	3300032025	Soil	MVALMKKTPTIGQVSLSALEDEWQRRATAAAIEAAR
Ga0310911_104000433	3300032035	Soil	VGVVKKMRSVAEVSLSAIEDQWQRDATAAAIAGARG
Ga0310911_104298032	3300032035	Soil	MGTLMRKIRTIGIVSETALEDEWQRRATAAAIEAARGVVQ
Ga0318545_100613733	3300032042	Soil	VGVVKKMRSVAEVSLSAIEDQWQRDATAAAIAGARGVVQMGGPIPP
Ga0318545_100766894	3300032042	Soil	MSNKKIKAVGEVSLSALEDVWQRDATAAAIAGARGVVQIGGPV
Ga0318556_105577822	3300032043	Soil	MRTIRTVGMVSETALEDEWQRRATAAAIEAARGVITLGGPIP
Ga0318570_100620383	3300032054	Soil	VGVVKKKKTRTVGEVSLSALEDQWQRDATASAIAAIRG
Ga0318505_103519092	3300032060	Soil	MKKMRTVGQISPSAIEDQWQRDATAAAIAGARGVVQMDGPIPPGTP
Ga0306924_114431161	3300032076	Soil	MRKARTIGMVSETALEDEWQRRATAAAIEAARGVVQ
Ga0306924_118382411	3300032076	Soil	MRKKARAIGQVSMSALEDVWQRDATAATIAAAREVVQ
Ga0318525_103906911	3300032089	Soil	MKKVRAIGEVSLSALEDQWQRDATAAAIAGAKGVVQIGG
Ga0318518_102347601	3300032090	Soil	VKKKKTHTIGEVSLSALGDQWQRDATAAAITAMRG
Ga0318540_101382973	3300032094	Soil	VGVVKKMRSVAEVSLSAIEDQWQRDATAAAIAGARGVVQM
Ga0318540_103716991	3300032094	Soil	VGVVKKVRAIGEVSLSVLEDRWQRNSTAAAIEAARSVIQ
Ga0306920_1010954883	3300032261	Soil	VGVVKKKTHTIGEVSLSALADQWQRDATAAAITAMRGV
Ga0306920_1025676921	3300032261	Soil	MKKIRTVGRVSLSVLEDQWQRDATAATITAARGVIRDGGPI
Ga0310914_107995842	3300033289	Soil	MKKTRTIGEASLSVLEDQWQRDATAAAIAGMRGVVQMDGPIP
Ga0310914_108855021	3300033289	Soil	VRKPRAIGEVSLAALEDQRQRDATAAAIAAARGVVQLDGPIPPGTP
Ga0310914_110636191	3300033289	Soil	MKKMRTVGQASLSAIEDQWQRDATTAAIAGARGIVQ
Ga0310914_115162092	3300033289	Soil	MRKIRTIGVISETALEDEWQRRATAAAIEAARGVVQMDGPI
Ga0318519_110465932	3300033290	Soil	MKKVRTIGEVSLSAIEDQWQRDATAAAIAGARGVIQLGGP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084892

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences