Metagenome / Metatranscriptome Family F084900

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084900
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	97 residues
Representative Sequence	MSPELTDDVRASQAFIEALRRTADMVFSKEEIIISEKMKIGDPVVCTIEAHKENGDSSQASGKAYIYPDLIIVCIESVCKALREPIFPHHYEYLSY
Number of Associated Samples	64
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.36 %
% of genes near scaffold ends (potentially truncated)	17.86 %
% of genes from short scaffolds (< 2000 bps)	68.75 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.214 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment (29.464 % of family members)
Environment Ontology (ENVO)	Unclassified (39.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Sediment (non-saline) (34.821 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.35% β-sheet: 33.06% Coil/Unstructured: 47.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.30.5.9: Galactose mutarotase-like	d1txka2	1txk	0.64
d.17.1.2: Cystatin/monellin	d3nx0a_	3nx0	0.64
d.17.1.0: Cystatin/monellin	d6uioa_	6uio	0.63
d.17.1.0: Cystatin/monellin	d4n6ob1	4n6o	0.62
f.4.3.3: Porins	d1po0a_	1po0	0.61

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01451	LMWPc	8.04
PF01258	zf-dskA_traR	6.25
PF09723	Zn-ribbon_8	3.57
PF00072	Response_reg	1.79
PF00027	cNMP_binding	1.79
PF07238	PilZ	1.79
PF08388	GIIM	1.79
PF00313	CSD	1.79
PF08448	PAS_4	1.79
PF00990	GGDEF	1.79
PF00929	RNase_T	0.89
PF13432	TPR_16	0.89
PF13426	PAS_9	0.89
PF00581	Rhodanese	0.89
PF02922	CBM_48	0.89
PF01656	CbiA	0.89
PF13565	HTH_32	0.89
PF04333	MlaA	0.89
PF04191	PEMT	0.89
PF02583	Trns_repr_metal	0.89
PF11839	Alanine_zipper	0.89
PF11249	DUF3047	0.89
PF00005	ABC_tran	0.89
PF02272	DHHA1	0.89
PF14535	AMP-binding_C_2	0.89
PF07478	Dala_Dala_lig_C	0.89
PF06723	MreB_Mbl	0.89
PF03783	CsgG	0.89
PF01256	Carb_kinase	0.89
PF01368	DHH	0.89
PF07883	Cupin_2	0.89
PF03162	Y_phosphatase2	0.89
PF02353	CMAS	0.89
PF01855	POR_N	0.89
PF02769	AIRS_C	0.89
PF00216	Bac_DNA_binding	0.89
PF05494	MlaC	0.89
PF13495	Phage_int_SAM_4	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	6.25
COG0063	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate dehydratase domain	Nucleotide transport and metabolism [F]	0.89
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	0.89
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.89
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.89
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.89
COG1462	Curli biogenesis system outer membrane secretion channel CsgG	Cell wall/membrane/envelope biogenesis [M]	0.89
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	0.89
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.89
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.89
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.89
COG2365	Protein tyrosine/serine phosphatase Oca4	Signal transduction mechanisms [T]	0.89
COG2853	Lipoprotein subunit MlaA of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.89
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.89
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	85.71 %
Unclassified	root	N/A	1.79 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.89 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	80.36 %
Unclassified	root	N/A	1.79 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.89 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	80.36 %
Unclassified	root	N/A	1.79 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.89 %

Name	Rank	Taxonomy	Distribution
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	66.07 %
Unclassified	root	N/A	1.79 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.89 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	66.07 %
Unclassified	root	N/A	1.79 %
Deltaproteobacteria bacterium ADurb.Bin135	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	0.89 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Syntrophaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae	58.93 %
Syntrophus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus	1.79 %
Unclassified	root	N/A	1.79 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.89 %
Deltaproteobacteria bacterium ADurb.Bin135	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Syntrophaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	58.93 %
Syntrophus aciditrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus aciditrophicus	1.79 %
Unclassified	root	N/A	1.79 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.89 %
Deltaproteobacteria bacterium ADurb.Bin135	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908038\|B3_all_c_ConsensusfromContig153129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	715	Open in IMG/M
2140918023\|ConsensusfromContig39234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	606	Open in IMG/M
3300000558\|Draft_10007269	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	75185	Open in IMG/M
3300000558\|Draft_10009117	All Organisms → cellular organisms → Bacteria	60962	Open in IMG/M
3300001213\|JGIcombinedJ13530_100838013	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	659	Open in IMG/M
3300002446\|NAPDCCLC_10081341	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3283	Open in IMG/M
3300002703\|draft_11070154	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3345	Open in IMG/M
3300002821\|Iso3TCLC_10024600	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	15107	Open in IMG/M
3300003858\|Ga0031656_10003462	All Organisms → cellular organisms → Bacteria	6428	Open in IMG/M
3300003858\|Ga0031656_10005525	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5221	Open in IMG/M
3300003858\|Ga0031656_10012952	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	3488	Open in IMG/M
3300003858\|Ga0031656_10072243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	1310	Open in IMG/M
3300003858\|Ga0031656_10077660	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300003859\|Ga0031653_10006521	All Organisms → cellular organisms → Bacteria	3240	Open in IMG/M
3300003859\|Ga0031653_10025584	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300003859\|Ga0031653_10092531	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	793	Open in IMG/M
3300003859\|Ga0031653_10153800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	601	Open in IMG/M
3300003859\|Ga0031653_10158735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	591	Open in IMG/M
3300003860\|Ga0031658_1001374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4400	Open in IMG/M
3300003860\|Ga0031658_1015806	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1272	Open in IMG/M
3300003910\|JGI26437J51864_10085567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	691	Open in IMG/M
3300003910\|JGI26437J51864_10159162	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	525	Open in IMG/M
3300004155\|Ga0066600_10477772	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	604	Open in IMG/M
3300004282\|Ga0066599_100496027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	791	Open in IMG/M
3300004282\|Ga0066599_101634424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	500	Open in IMG/M
3300004481\|Ga0069718_13549321	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300004481\|Ga0069718_14801408	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1990	Open in IMG/M
3300006224\|Ga0079037_100458919	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1217	Open in IMG/M
3300006224\|Ga0079037_100875123	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	885	Open in IMG/M
3300009039\|Ga0105152_10034585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	2002	Open in IMG/M
3300009111\|Ga0115026_10168826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1430	Open in IMG/M
3300009111\|Ga0115026_11649301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	538	Open in IMG/M
3300009118\|Ga0117940_112186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	623	Open in IMG/M
3300009119\|Ga0117938_104428	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	958	Open in IMG/M
3300009167\|Ga0113563_12146800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	670	Open in IMG/M
3300009167\|Ga0113563_13720781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	516	Open in IMG/M
3300009168\|Ga0105104_10033275	All Organisms → cellular organisms → Bacteria	2881	Open in IMG/M
3300009179\|Ga0115028_10654197	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	794	Open in IMG/M
3300009388\|Ga0103809_1021707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	961	Open in IMG/M
3300009634\|Ga0116124_1159868	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	629	Open in IMG/M
3300009646\|Ga0116132_1084215	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	986	Open in IMG/M
3300012152\|Ga0137347_1077432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	586	Open in IMG/M
3300012931\|Ga0153915_10000625	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	32957	Open in IMG/M
3300012931\|Ga0153915_10007618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10227	Open in IMG/M
3300012964\|Ga0153916_10034966	All Organisms → cellular organisms → Bacteria	4410	Open in IMG/M
3300012964\|Ga0153916_10320410	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1592	Open in IMG/M
3300012964\|Ga0153916_10860145	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	987	Open in IMG/M
3300014502\|Ga0182021_12550203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	615	Open in IMG/M
3300017998\|Ga0187870_1121679	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	982	Open in IMG/M
3300017998\|Ga0187870_1167306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	793	Open in IMG/M
3300018005\|Ga0187878_1352610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	519	Open in IMG/M
3300018013\|Ga0187873_1183191	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	789	Open in IMG/M
3300018029\|Ga0187787_10168733	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	754	Open in IMG/M
3300018068\|Ga0184636_1014585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus aciditrophicus	2334	Open in IMG/M
3300018070\|Ga0184631_10009588	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	2986	Open in IMG/M
3300019234\|Ga0172288_1258859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	545	Open in IMG/M
3300019861\|Ga0206388_1092195	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	639	Open in IMG/M
3300025843\|Ga0209182_10048535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1230	Open in IMG/M
3300027885\|Ga0209450_10049581	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	2589	Open in IMG/M
3300027885\|Ga0209450_10057845	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	2427	Open in IMG/M
3300027885\|Ga0209450_10085295	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300027885\|Ga0209450_10726242	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	720	Open in IMG/M
3300027890\|Ga0209496_10269544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	841	Open in IMG/M
3300027896\|Ga0209777_10141516	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1994	Open in IMG/M
3300027896\|Ga0209777_10354601	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1117	Open in IMG/M
3300027897\|Ga0209254_10020422	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	6038	Open in IMG/M
3300027897\|Ga0209254_10056527	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3403	Open in IMG/M
3300027897\|Ga0209254_10107488	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2333	Open in IMG/M
3300027897\|Ga0209254_10396802	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300027897\|Ga0209254_10678235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	714	Open in IMG/M
3300027897\|Ga0209254_10813082	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	631	Open in IMG/M
3300027897\|Ga0209254_11124124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	500	Open in IMG/M
3300027899\|Ga0209668_10019644	Not Available	3319	Open in IMG/M
3300027899\|Ga0209668_10022031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	3162	Open in IMG/M
3300027899\|Ga0209668_10034994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	2606	Open in IMG/M
3300027899\|Ga0209668_10222365	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1184	Open in IMG/M
3300027900\|Ga0209253_10161589	Not Available	1808	Open in IMG/M
3300027902\|Ga0209048_10273086	All Organisms → cellular organisms → Bacteria → Proteobacteria	1195	Open in IMG/M
3300028916\|Ga0310376_1025841	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1404	Open in IMG/M
3300032143\|Ga0315292_11045026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	677	Open in IMG/M
3300032156\|Ga0315295_11828879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	575	Open in IMG/M
3300032163\|Ga0315281_10082097	All Organisms → cellular organisms → Bacteria → Proteobacteria	3785	Open in IMG/M
3300032163\|Ga0315281_10631966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1123	Open in IMG/M
3300032401\|Ga0315275_10419874	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1499	Open in IMG/M
3300032401\|Ga0315275_11471512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	732	Open in IMG/M
3300032783\|Ga0335079_10078678	All Organisms → cellular organisms → Bacteria	3749	Open in IMG/M
3300032892\|Ga0335081_10331977	All Organisms → cellular organisms → Bacteria → Proteobacteria	1993	Open in IMG/M
3300032897\|Ga0335071_10047848	All Organisms → cellular organisms → Bacteria → Proteobacteria	4224	Open in IMG/M
3300032897\|Ga0335071_10051687	All Organisms → cellular organisms → Bacteria	4054	Open in IMG/M
3300032897\|Ga0335071_10266933	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1665	Open in IMG/M
3300033414\|Ga0316619_11409443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	622	Open in IMG/M
3300033418\|Ga0316625_100333455	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus aciditrophicus	1103	Open in IMG/M
3300033419\|Ga0316601_102235251	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	551	Open in IMG/M
3300033433\|Ga0326726_10008593	All Organisms → cellular organisms → Bacteria → Proteobacteria	9062	Open in IMG/M
3300033433\|Ga0326726_10016724	All Organisms → cellular organisms → Bacteria	6383	Open in IMG/M
3300033433\|Ga0326726_10184635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1919	Open in IMG/M
3300033433\|Ga0326726_10191977	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1882	Open in IMG/M
3300033433\|Ga0326726_10276904	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1569	Open in IMG/M
3300033433\|Ga0326726_10355920	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	1382	Open in IMG/M
3300033433\|Ga0326726_11738095	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	607	Open in IMG/M
3300033482\|Ga0316627_102812775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	517	Open in IMG/M
3300033486\|Ga0316624_10021764	All Organisms → cellular organisms → Bacteria	3630	Open in IMG/M
3300033488\|Ga0316621_10622889	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	771	Open in IMG/M
3300033488\|Ga0316621_10768567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	702	Open in IMG/M
3300033513\|Ga0316628_100740101	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1293	Open in IMG/M
3300033521\|Ga0316616_100160304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	2153	Open in IMG/M
3300033521\|Ga0316616_102019520	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	764	Open in IMG/M
3300033557\|Ga0316617_100345517	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1285	Open in IMG/M
3300033557\|Ga0316617_100512739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1092	Open in IMG/M
3300033557\|Ga0316617_101535433	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	673	Open in IMG/M
3300033557\|Ga0316617_102611056	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	525	Open in IMG/M
3300034090\|Ga0326723_0115260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1168	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.86%
Engineered	Engineered	7.14%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	65.18%
Terrestrial	Environmental → Terrestrial	27.68%
Lab Enrichment	Engineered → Lab Enrichment	4.46%
Wastewater	Engineered → Wastewater	2.68%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	59.82%
Soil	Environmental → Terrestrial → Soil	20.54%
Peat	Environmental → Terrestrial → Peat	7.14%
Sediment	Environmental → Aquatic → Sediment	4.46%
Defined Media	Engineered → Lab Enrichment → Defined Media	4.46%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	2.68%
Marine	Environmental → Aquatic → Marine	0.89%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	29.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.39%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.14%
Lake	Environmental → Aquatic → Freshwater → Lake	7.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.46%
Pond	Environmental → Aquatic → Freshwater → Pond	2.68%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	2.68%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	2.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.79%
Unclassified	Engineered → Lab Enrichment → Defined Media → Unclassified	1.79%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	29.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.86%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.14%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.57%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	2.68%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	2.68%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	2.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.79%
Unclassified	Engineered → Lab Enrichment → Defined Media → Unclassified → Unclassified	1.79%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%

Habitat	Taxonomy	Distribution
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	29.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	16.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	7.14%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.36%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	4.46%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	4.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.57%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.57%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	2.68%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	2.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.79%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	1.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.79%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.79%
Hydrocarbon Resource Environments	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments	1.79%
Anaerobic Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Unclassified → Unclassified → Anaerobic Enrichment Culture	1.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.89%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.89%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908038	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2140918023	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
3300000558	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011	Engineered	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002446	Oil sands microbial community from Northern Alberta which degrade Naphthaline	Engineered	Open in IMG/M
3300002703	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Oil sands tailings Tailings Pond 5 - 2012TP5	Engineered	Open in IMG/M
3300002821	Iso-alkanes.Hi.seq-Iso3T	Engineered	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003859	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300003910	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009039	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009118	Lake sediment microbial communities from Pelican Lake, MN	Environmental	Open in IMG/M
3300009119	Lake sediment microbial communities from Leach Lake, MN	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009388	Metatranscriptome sequencing of an Anaerobic Hexadecane-Degrading Microbial Consortia from University of California, San Diego, USA - Hexadecane	Engineered	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300012152	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT590_2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300019234	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019861	Lab enriched sediment microbial communities from oil refinery in Oklahoma, USA - DGG1A 1	Engineered	Open in IMG/M
3300025843	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028916	Lab enriched sediment microbial communities from oil refinery in Oklahoma, USA. Combined Assembly of Gp0220779, Gp0324998	Engineered	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_all_c_00125060	2124908038	Soil	MARKINDDIRASLAFIEALHRTEDMDFSRDDIIISEKKKMGDPVVCTIEARKRNGISSQAKGKAFIYSDLVIVCVESVRKKSRAPIHPHHYEYLSY
B3_GZBA_C_00130130	2140918023	Soil	MARKINDDTRASLAFIEALHRTEDMDFSRDDIIISEKKKMGDPVVCTIEARKRNGISSQAKGKAFIYSDLVIVCVESVRKKSRAPIHPHHYEYLSY
Draft_1000726932	3300000558	Hydrocarbon Resource Environments	MAPELTDDVRAGQAFIEALRRSEKMVFSRDEIIISERMKIGDPVVCTIEAHKENGDSSQATGKAYIYPDLVVICIESVWKALSDPIYPHHYEYLSY*
Draft_1000911753	3300000558	Hydrocarbon Resource Environments	MPTRITDDSRASQAFIESLRRTADMVFSKTEIVISGKKKMGDPVVCTIEARKGNGDSSHAKGQAYIYFDLVIVCVESVSKKSMEPIYPHQYEYHSY*
JGIcombinedJ13530_1008380132	3300001213	Wetland	METGSSLDARAGEAFIEALRRKAGLVFSEEEVVISERMNIGDSVVCSVEARKIRGESSQAIGKAYVYPDLVVVCIESVCRKWREPIFPHHYEYLSY*
NAPDCCLC_100813412	3300002446	Hydrocarbon Resource Environments	MSPELIDDVRVCLAFIGALHRTEDMIFSKEEISISKKMKIGDPVVCTIEAHKENGDSSQASGQAYIYPDLIVVCIESVYKALSEQILPHHYEYFSY*
draft_110701542	3300002703	Hydrocarbon Resource Environments	MSPELIDDVRVCLAFIEALHRTEDMIFSKEEISISKKMKIGDPVVCTIEAHKENGDSSQASGQAYIYPDLIVVCIESVYKALSEQILPHHYEYFSY*
Iso3TCLC_100246003	3300002821	Hydrocarbon Resource Environments	MEPILTDDLRASSAFIEALRRTEDMDFSKDEIKISHKKNIGDPIVCMVEAQKRNGDSRHATGQAYIYPDLIVVCIESVWKTFMDPTHPHHYEYLCF*
Ga0031656_100034623	3300003858	Freshwater Lake Sediment	VTRKINDDMRATLAFIEALRRTEDMIFSRDDISISEKKKMGDPVVCTIEARNGNGDSPQAKGKAFIYPDLVIVCVESVWKTLGDPIHPHHYVYLNY*
Ga0031656_100055254	3300003858	Freshwater Lake Sediment	MAPALIDDVRASQAFIEALRRATDMIFSKEEIIISEKMKIGDPVVCTIEAHRENGDSSQASGKAYIYSDLIVVCVESVCKSLMEPIYLHHYEYLSY*
Ga0031656_100129521	3300003858	Freshwater Lake Sediment	VTRKINDDMRATLAFIEALRRTEDMLFSRDDLIISEKKKMGDPVVCTIEARNGNGDSPQAKGTAFIYPDLVIVCVESVWKTLGDPIHPHHYVYLDY*
Ga0031656_100722432	3300003858	Freshwater Lake Sediment	MMPDISIHERACQAFIEALRRSEDMVFLKDEIXISEKKKIGDPVVCAMGAQKGNGDSSCATGKAYVYGDLVIVCVESVWKRLAEPIYPHHYEYLSY*
Ga0031656_100776602	3300003858	Freshwater Lake Sediment	MDIAIHERASRAFIEALRRSEDMLFSRDEVNISEKKKIGDPVVCAVEAQKGNGDSSYATGKAYVYSDLVIVCVESVWNKFTEPVYPHHYEYLSY*
Ga0031653_100065213	3300003859	Freshwater Lake Sediment	MAPELTDDVRASQAFIEALRRTTDMVFFKEEIIISERMKIGDPVVCTIEAHKENGDSSQASGKAYIYPDLIVVCVESVCKALREPIYPHHYEYLSY*
Ga0031653_100255842	3300003859	Freshwater Lake Sediment	MFSRFNFLTYLLGECIEEGANMAPALIDDVRASQAFIEALRRATDMIFSKEEIIISEKMKIGDPVVCTIEAHRENGDSSQASGKAYIYSDLIVVCVESVCKSLMEPIXLHHYEYLSY*
Ga0031653_100925311	3300003859	Freshwater Lake Sediment	MDIAIHERASRAFIEALRRSEDMLFSRDEVNISEKKKIGDPVVCAVEAQKGNGDSSYATGKAYVYGDLVIVCVESVGKRFTEPVYPHHYEYLSY*
Ga0031653_101538001	3300003859	Freshwater Lake Sediment	VTSKINDDMRATLAFIEALRRTEDMIFSRDDISISEKKKMGDPVVCTIEARNGNGDSPQAKGKAFIYPDLVIVCVESVWKTLGDPIHPHHYVYLNY*
Ga0031653_101587351	3300003859	Freshwater Lake Sediment	MSPELTDDVRASQAFIEALRRTTDMVFFKEEIIISEKMKIGDPVVCTIEAHKENGDSSQASGKAYIYPDLIVVCVESVCKALREPIYPHHYEYLSY*
Ga0031658_10013742	3300003860	Freshwater Lake Sediment	VTHKINDDMRVTLAFIEALRRTEDMIFSRDDISXSEKKKMGDPVVCTIEARNGNGDSPQAKGKAFIYPDLVIVCVESVWKTLGDPIHPHHYVYLNY*
Ga0031658_10158061	3300003860	Freshwater Lake Sediment	MFSRFNFLTYLLGECIEEGANMAPALIDDVRASQAFIEALRRATDMIFSKEEIIISEKMKIGDPVVCTIEAHRENGDSSQASGKAYIYSDLIVVCVESVCKSLMEPIYLHHYEYLSY*
JGI26437J51864_100855672	3300003910	Freshwater Lake Sediment	MGKSIVARKINDDVRASLAFIEALSRTADMVFFREEITISEKMKIGDAVICTIDAQKGNGDSSHAKGQAYIYSDLVIVCVESVSKKLMEPIYP
JGI26437J51864_101591621	3300003910	Freshwater Lake Sediment	IIFFSIAFCKTMSDNNILFMIQLFSTYLLGECIEEGANMAPELTDDVRASQAFIEALRRTTDMIFSKEEIIISEKMKIGDPVICTIEAHRENGDSSHANGKAYIYSDLIVVCVESVCKAFMEPNHLHHYEYLSY*
Ga0066600_104777721	3300004155	Freshwater	MDIAIHERASRAFIEALRRSEDMLFSRDEVNISEKKKIGDPVVCAVEAQKGNGNSSYATGKAYVYGDLVIVCVESVGKRFTEPVYPHHYEYLSY*
Ga0066599_1004960272	3300004282	Freshwater	MRATLAFIEALRRTEDMIFSRDDISISEKKKMGDPVVCTIEARNGNGDSPQAKGKAFIYPDLVIVCVESVWKTLGDPIHPHHYVYLNY*
Ga0066599_1016344241	3300004282	Freshwater	MAPELTDDVRASQAFIEALRRTTDMIFSKEEIIISEKMKIGDPVICTIEAHRENGDSSQANGKAYIYSDLIVVCVESVCKAFMEPIQLHHYEYLSY*
Ga0069718_135493212	3300004481	Sediment	VMDISIHERACQAFIEALRRSEDMVFAKDEIIISEKKKIGDPVVCAMEAQKGNGDSSCATGKVYVYGDLVIVCVESVGKRFTEPVYPHHYEYLSY*
Ga0069718_148014082	3300004481	Sediment	MSSELTDEVRASQAFIEALRRTADMVFSKEELIISEKMKIGDPIVCTIEAHKENGDSSQASGKAYIYPDLIVVCVESICKALREPMFPHHYEYLSY*
Ga0079037_1004589192	3300006224	Freshwater Wetlands	MAPELIDDVRASQAFIEALRRTTDMIFSNEEIIISEKMKIGDPVVCTIEAHRENGDSSQASGKAYIYSDLIVVCVESVCKSFMEPIHLHHYEYLSY*
Ga0079037_1008751232	3300006224	Freshwater Wetlands	MAPGLIDDTRASQAFIEALRRTTDIIFSKEEIVISEKMKIGDPIVCTIEAHKKNGDSSEASGQAYIYPDLIVVCIESVSKAFREPIFPHHYEYLSY*
Ga0105152_100345851	3300009039	Lake Sediment	MAPQLPDDARASQAFIEALRRATDMIFSKEEIIISEKMKIGDPVVCTIEAHRENGDSSQASGKAYIYSDLIVVCVESVCKSLMEPIHLHHYEYLSY*
Ga0115026_101688262	3300009111	Wetland	MSPELTDDLRACRAFIEALRRTADMDFSKENLIISEKKKLGDPVVCTIEARQGNGDSSQASGQAYIYPDLIVVCIESVCKALSEPIFPHHYEYLSY*
Ga0115026_116493012	3300009111	Wetland	LIDDARASQAFIEALRRTADIIFSKEEIVISEKMKIGDPIVCTIEAHKKNGDSSEASGQAYIYPDLIVVCIESVSKAFREPIFPHHYEYLSY*
Ga0117940_1121861	3300009118	Lake Sediment	LWNVCKKDKNRSLKMGKSIVARKINDDVRASLAFIEALSRTADMVFSKEEIIISEKMKIGDAVICTIDAQKGNGDSSHAKGQAYIYSDLVIVCVESVSKKLMEPIYPHQYEYLSY*
Ga0117938_1044282	3300009119	Lake Sediment	MSPELIDDVRVCLAFIEALRRTADMIFSKEEITISEKMKIGGPVIYTIVAHKENGDSLRASGQAYIYSDLIVVCIESVCKALGEPTSPHHYEYLSY*
Ga0113563_121468002	3300009167	Freshwater Wetlands	MAPEFIDDTRASQAFIEALRRTTDIIFSKEEIVISEKMKIGDPIVCTIEAHKKNGDSSEASGQAYIYPDLIVVCIESVSKAFREPIFPHHYEYLSY*
Ga0113563_137207811	3300009167	Freshwater Wetlands	MGKSIVARKINDDVRASQAFIEALRRTADIAFSKEEIIISEKMKIGDPVICTIEAQKGNGDSSYAKGKAYIYSDLVIVCVESVSKKLMEPIYPHQYEYLSY*
Ga0105104_100332754	3300009168	Freshwater Sediment	VARKINDDARASLAFIEALRRTADMVFSREDIIISEKMKIGDPVICTIEAQKGNGDSSHAKGQAYIYTDLVIVCVESVTKKLMEPIYPNQYEYLSY*
Ga0115028_106541971	3300009179	Wetland	TNMAPGLIDDTRASQAFIEALRRTTDIIFSKEEIVISEKMKIGDPIVCTIEAHKKNGDSTEASGQAYIYSDLVVVCIESVSKAFREPIFPHHYEYLSY*
Ga0103809_10217072	3300009388	Enrichment Culture	MDISVHERACQAFIEALRRSEDMVFVKDEIIISEKKKIGDSVICAMEAHKGNGDSSHASGQAYVYRDLVIVCVESVRKRFTEPVYPHHYEYLSY*
Ga0116124_11598681	3300009634	Peatland	MARKINDDMRASLAFIEALHRTEDMDFSRDDIIISEKKKMGDPVVCTVEARRGNGDSSYAKGKAFIYPDMVIVCVESVWKKFSDPIHPHHYEYLSY*
Ga0116132_10842151	3300009646	Peatland	VSLEIEDDVRACRAFIEALRRTEEMVFSKDEIIISDRKKIGDPVVCTIEAQKGNGDSSQAIGKAYIYPDMVVVCVESARRKLKDPIYPHHYEYLS
Ga0137347_10774321	3300012152	Soil	MSIRLTDDARASQAFIEALRRTADMVFSKNEIIISEKKKIGGPVICTIEAQKGNGDSSHAKGQAYIYPDLVVVCIEMVWKKLMEPTYPHHY
Ga0153915_1000062523	3300012931	Freshwater Wetlands	MSIRITDDVRASQAFIEALRRTADIVFSKEEIIISEKMKIGDPVVCTIEAQKGNGDSSHAKGQAYIYPNLVIVCVESVSKKLMEPIYPHHYEYLSY*
Ga0153915_100076185	3300012931	Freshwater Wetlands	MSPELTDDVRASQAFIEALRRTADMVFSKEEIIISEKMKIGDPVVCTIEAHKENGDSSQASGKAYIYPDLIIVCIESVCKALREPIFPHHYEYLSY*
Ga0153916_100349661	3300012964	Freshwater Wetlands	YLFGEYISEQEGTNMSPELTDDVRACQAFIEALRRTADMVFSREEIIISAKKKIGDPVVCTIEAHKENGDSSQASGKAYIYPDLIIVCIESVCKALREPIFPHHYEYLSY*
Ga0153916_103204104	3300012964	Freshwater Wetlands	TDDVRASQAFIEALRRTADMVFSKEELIISEKMKIGDPVICTIEAQKRNGDSSHAKGHAYIYPDLVIVCVESVSKKLMEPIFPHHYEYLSY*
Ga0153916_108601452	3300012964	Freshwater Wetlands	MSPKLTNDGRARKAFIEALRRTADMDFSKEEIIITEKMKIGNPIVCTIEAHKKNGVSSQASGQAYIYPNLIVVCIESVCKALQEPIYPHHYEYLSY*
Ga0182021_125502031	3300014502	Fen	MARKINDDTRASLAFIEALHRREDMDFSRDDIIISEKKKMGDPMVCTVEARNGNGVSSHAKGQAFIYPDMVIVCIESVWKKLSEPIHPHHYEYLSY*
Ga0187870_11216791	3300017998	Peatland	MARKINDDMRASLAFIEALHRTEDMDFSRDDIIISEKKKMGDPVVCTVEARRGNGASSYAKGKAFIYPDMVIVCVESVWKKFSDPIHPHHYEYLSY
Ga0187870_11673062	3300017998	Peatland	VSLEIEDDVRACRAFIEALRRTEEMVFSKDEIIISDRKKIGDPVVCTIEAQKGNGDSSQAIGKAYIYPDMVVVCVESARKKLKDPIYPHHYEYLSY
Ga0187878_13526101	3300018005	Peatland	ARTINDNIRASLAFIEALRRTEDMVFSRDDIIISEKKKMGDPVVCTIEARKENGDSSQAKGKAFIYSDLVIVCVESVRKKSRAPIHPHHYEYLSY
Ga0187873_11831912	3300018013	Peatland	SLAFIEALHRTEDMDFSRDDIIISEKKKMGDPVVCTVEARRGNGASSYAKGKAFIYPDMVIVCVESVWKKFSDPIHPHHYEYLSY
Ga0187787_101687332	3300018029	Tropical Peatland	MPEIRRIAADRKLAKMARKINADTRASLAFIEALRRTENMVFSRDDIIISEKKKTGDPVICTIEARKGNRDLPQAMGQAFVYSDLVIVCVETVCKKSMDPIYPHHYEYLNY
Ga0184636_10145855	3300018068	Groundwater Sediment	VEPIITDDVRACRAFIEALRRTEDMIFSKEEIIISGKKKMGDPIVYTIEAHKGNGDSSHASGQAYIYNDLVIVCVESVQKALKDPKHPHHYEYLSY
Ga0184631_100095884	3300018070	Groundwater Sediment	VEPIITDDVRACRAFIEALRRTEDMIFSKEEIIISDKKKMGDPIVYTIEAHKGNGDSSHASGQAYIYNDLVIVCVESVQKALKDQKHPHHYEYLSY
Ga0172288_12588592	3300019234	Wetland	MAPELIDDVRASQAFIEALRRTTDMIFSNEEIIISEKMKIGDPVVCTIEAHRENGDSSQASGKAYIYSDLIVVCVESVCKSFMEPIHLHHYEYLSY
Ga0206388_10921952	3300019861	Anaerobic Enrichment Culture	MRKSIVARKINDDVRASLAFIEALSRTADMVFSREEIAISEKMKIGDTVICIIDAQKRNGDSSHAKGQAYIYSDLVIICVESVSKKLMEPIYPHQYEYLSY
Ga0209182_100485354	3300025843	Lake Sediment	MAPQLPDDARASQAFIEALRRATDMIFSKEEIIISEKMKIGDPVVCTIEAHRENGDSSQASGKAYIYSDLIVVCVESVCKSLMEPIHLHHYEYLSY
Ga0209450_100495812	3300027885	Freshwater Lake Sediment	MGKSIVARKINDDVRASLAFIEALSRTADMVFFREEITISEKMKIGDAVICTIDAQKGNGDSSHAKGQAYIYSDLVIVCVESVSKKLMEPIYPHQYEYLSY
Ga0209450_100578452	3300027885	Freshwater Lake Sediment	MSPELIDDVRVCLAFIEALRRTADMIFSKEEITISEKMKIGGPVIYTIVAHKENGDSLRASGQAYIYSDLIVVCIESVCKALGEPTSPHHYEYLSY
Ga0209450_100852951	3300027885	Freshwater Lake Sediment	MAPELTDDVRASQAFIEALRRTTDMIFSKEEIIISEKMKIGDPVICTIEAHRENGDSSHANGKAYIYSDLIVVCVESVCKAFMEPNHLHHYEYLSY
Ga0209450_107262422	3300027885	Freshwater Lake Sediment	VMDIAIHERACQAFIEALRRSEDIVFAKDEIIISEKKKIGDPVVCAMEAQKGNGDSSCATGKAYVYGDLVIVCVESVGKRFTEPVYPHHYEYLSY
Ga0209496_102695441	3300027890	Wetland	IDDTRASQAFIEALRRTTDIIFSKEEIVISEKMKIGDPIVCTIEAHKKNGDSTEASGQAYIYSDLVVVCIESVSKAFREPIFPHHYEYLSY
Ga0209777_101415162	3300027896	Freshwater Lake Sediment	MARKINDDIRASLAFIEALHRTEDIAFSRDDIIISEKKKMGDPVVCTIEARKGNGDSSHAMGKAFIYPDLVIVCVESVWKKSRDPIHPHHYEYLNF
Ga0209777_103546012	3300027896	Freshwater Lake Sediment	NVAPIITDDLRARLAFIEALHRTENMDFSNDEIIISEKKKMGDPIVYTVEAKKTNGDSSHAIGKAYIYPDLVIVCVESVWKRLMDPTYPHHYEYLSI
Ga0209254_100204225	3300027897	Freshwater Lake Sediment	MFSRFNFLTYLLGECIEEGANMAPALIDDVRASQAFIEALRRATDMIFSKEEIIISEKMKIGDPVVCTIEAHRENGDSSQASGKAYIYSDLIVVCVESVCKSLMEPIYLHHYEYLSY
Ga0209254_100565275	3300027897	Freshwater Lake Sediment	VTRKINDDMRATLAFIEALRRTEDMIFSRDDISISEKKKMGDPVVCTIEARNGNGDSPQAKGKAFIYPDLVIVCVESVWKTLGDPIHPHHYVYLNY
Ga0209254_101074884	3300027897	Freshwater Lake Sediment	MVLDISIHERACQAFIEALRRSEGMVFVHDEIIISEKKKIGDPVVCAMDAQKGNGDSSRATGKAYVYDDLVIVCVESVGKRFTDPVYPHHYEYLSY
Ga0209254_103968022	3300027897	Freshwater Lake Sediment	MMPDISIHERACQAFIEALRRSEDMVFLKDEITISEKKKIGDPVVCAMGAQKGNGDSSCATGKAYVYGDLVIVCVESVWKRLAEPIYPHHYEYLSY
Ga0209254_106782352	3300027897	Freshwater Lake Sediment	VMDIAIHERASRAFIEALRRSEDMLFSRDEVNISEKKKIGDPVVCAVEAQKGNGDSSYATGKAYVYSDLVIVCVESVWNKFTEPVYPHHYEYLSY
Ga0209254_108130821	3300027897	Freshwater Lake Sediment	MSPELIDDVRVCLAFIEALRRTADMIFSKEEISISERMKIGDPVICTIEARRENGGSSRASGKAYIYSDLVIVCVESICKASMDPIDLHHYEYL
Ga0209254_111241241	3300027897	Freshwater Lake Sediment	VTRKINDDMRATLAFIEALRRTEDMLFSRDDLIISEKKKMGDPVVCTIEARNGNGDSPQAKGTAFIYPDLVIVCVESVWKTLGDPIHPHHYVYLDY
Ga0209668_100196444	3300027899	Freshwater Lake Sediment	MSPELIDDVRVCLAFIEALRRTADMIFSKEEITISEKLKIDDPVICTIVAHKENRDSLRASGQAYIYSDLIVVCIESVCKALGEPTSPHHYEYLSY
Ga0209668_100220313	3300027899	Freshwater Lake Sediment	VMDIAIHERACQAFIEALRRSEDMVFLKDEIIISEKKKIGDPVVCAMGAQKGNGDSSCATGKAYVYGDLVIVCVESVWKRLAEPIYPHHYEYLSY
Ga0209668_100349941	3300027899	Freshwater Lake Sediment	VTHKINDDMRVTLAFIEALRRTEDMIFSRDDISVSEKKKMGDPVVCTIEARNGNGDSPQAKGKAFIYPDLVIVCVESVWKTLGDPIHPHHYVYLNY
Ga0209668_102223652	3300027899	Freshwater Lake Sediment	MVLDISIHERACQAFIEALRRSEGMVFVHDEIIISEKKIIGDPVVCAMDAQKGNGDSSRATGKAYVYDDLVIVCVESVGKRFTDPVYPHHYEYLSY
Ga0209253_101615893	3300027900	Freshwater Lake Sediment	MAPALIDDVRASQAFIEALRRATDMIFSKEEIIISEKMKIGDPVVCTIEAHRENGDSSQASGKAYIYSDLIVVCVESVCKSLMEPIHLHHYEYLSY
Ga0209048_102730862	3300027902	Freshwater Lake Sediment	VSAEIKDDVRACRAFIEALRRTEEMVFSKDEIIISDRKKIGDPVVCTIEAQKGNGDSSQAIGKAYIYSDMVVVCVESARKKLDDPIYPHHYEYLSY
Ga0310376_10258411	3300028916	Anaerobic Enrichment Culture	MSPELTVDLRACQAFIEALHRTENMVFSKEEIVISEKMKIGDTVICIIDAQKRNGDSSHAKGQAYIYSDLVIICVESVSKKLMEPIYPHQYEYLSY
Ga0315292_110450262	3300032143	Sediment	MAPELIDDVRASQAFIEALRRTTDMVFFKEEIIISERMKIGDPVVCTIEAHKENGDSSQASGKAYIYPDLIVVCVESVCKALREPIYPHHYEYLSY
Ga0315295_118288791	3300032156	Sediment	AFIEALRRATDMIFSKEEIIISEKMKIGDPVVCTIEAHRENGDSSQASGKAYIYSDLVVVCVESVCKSLMEPIHLHHYEYLSY
Ga0315281_100820972	3300032163	Sediment	MARKINDDVRASLAFIEALHRTEDMDFSRDDITISEKKKMGDPVVCTIEARKGNGDSSHARGQAFIYPDLVIICVESVWKKLRDPIYPHHYEYLSY
Ga0315281_106319663	3300032163	Sediment	MPLQITDDVRACQAFIEALRRTEQMVFSKDEIIISDKKKIGDPVVCTIEAKKENGDSSQAIGKAYIYPDIVIVCVESVWKKLSDPIYPHHYEYLGY
Ga0315275_104198741	3300032401	Sediment	VNIKWRDTNVEPIIIDDVRARRAFIEALRRTEDMIFSKEEIIISDKKKMGDPIVYTIEAHKGNGDSSHASGQAFIYNDLVIVCIESVQKALKDPKHPHHYEYLSY
Ga0315275_114715122	3300032401	Sediment	MAPELIDDVRACKAFIEALRRATDMIFSKEEIIISEKMKIGDPVVCTIEAHRENGDSSQASGKAYIYPDLIVVCVESVC
Ga0335079_100786782	3300032783	Soil	VARKINDDIRASLAFIEALRRTENMVFSRDDIIISEKKKMGDPVICTIEARKGNGDLPQAMGQAFVYSDLVIVCVESVQKKSMEPIHPHHYEYLNY
Ga0335081_103319772	3300032892	Soil	MARKVNDDIRASWAFIEALRRTEDMVFSRDDIVISEKKKIGDPVVCTIEARKGNGNSSHAMGKAFIYPDLVIVCVESVWKKSMDPIHPHHYEYLTY
Ga0335071_100478486	3300032897	Soil	MSLEITDDDRACQAFIEALRRAEGLVFSKDEIIISDKRKIGEPVVCTIEALKGNGDSSQAMGKAYVYPDIVVICVESAQKKSHEPTYPHHYEYLSY
Ga0335071_100516875	3300032897	Soil	MARKINDDMRARLAFIEALHRTEDMVFSRADITIFEKKKIGDPLVCTIEARKGNGDSPQAMGQAFVYPDLVIVCVESVRKKSMDPIHPHHYEYLNY
Ga0335071_102669331	3300032897	Soil	MARKIDDDIRASRAFIEALHRTEDMVFSRDDIIISEKKKMGDPVVCTLEARKGNGDSSRAMGQAFIYSDLVIVCVESVWKKSRHPIHPHHYEYLSY
Ga0316619_114094431	3300033414	Soil	MTDDLRACLAFIEALRRTEDMNFSKDEIKISEKKKIGDPIVCTVNAKKRNGDSSHATGQAYIYPDLVIVCIESVGKKLMEPTHPHHYEYLCV
Ga0316625_1003334553	3300033418	Soil	VEPLMTDDLRACLAFIEALRRTEDMNFSKDEIKISEKKKIGDPIVCTVNAKKRNGDSSHATGQAYIYPDLVIVCIESVGKKLMEPTHPHHYEYLCV
Ga0316601_1022352511	3300033419	Soil	FIEALRRTEDMNFSKDEIKISEKKKIGDPIVCTVNAKKRNGDSSHATGQAYIYPDLVIVCIESVWKKLMEPTHPHHYEYLCV
Ga0326726_100085933	3300033433	Peat Soil	MARKIKDDIRASLAFIEALHRTEDMAFSRDDIIISEKKKMGDPVVCTIEARKGNEDSSHAMGKAFIYPDLVIVCVESVWKKSRDPIHPHHYEYLNF
Ga0326726_100167249	3300033433	Peat Soil	VARKINDDERAVLAFIEAMRRTEDMVFSIDDIIISEKKKMGDPVVCTIEARNGNGDSSHAKGKAFIYPDLVIVCVESVWKPLRDVIHPHHYEYISC
Ga0326726_101846353	3300033433	Peat Soil	VEREINDDVRASLAFIEALRRTENMVFSRDDIIISEMKKIGDPVVCTIEAGNGNGDSPRAKGTAFIYSDWVIVCVESVWKPLMDPIHPHHYEYLNY
Ga0326726_101919773	3300033433	Peat Soil	MGRKINDDARASLAFIEALHRTEDMDFSRDDIIISEKKKMGDPVVCTIEARKGNGDLSHANGQAFIYPDLVIVCVENVWKPSSDPISPHHYEYLSY
Ga0326726_102769041	3300033433	Peat Soil	VARKINDDIRASLAFIEALRRTEDMVFSRDDIIISEKKKMGDPVVCTIEARKGNGDSSRAKGKAFIYPDLVIVCVESIWKPLMDVIHLHHYEYLSY
Ga0326726_103559202	3300033433	Peat Soil	MRSFFFLRIFKTHPFFDMQEMRELTRMARKINDDIRASRAFIEALHRTEDMAFSRGDIIISEKKKMGDPVVCTIEARKGNGDSSHAMGKAFIYPDLVIVCVESVWKKSRDPIHPHHYEYLNF
Ga0326726_117380951	3300033433	Peat Soil	MARKINDDERASLAFIEALHRTEDMDFSRDDIIISEKKKVGDPVVCTIEARKGNGDSSHAKGQAFIYSDLVIVCIETVWKKLRDPIHPHHYEYLSY
Ga0316627_1028127751	3300033482	Soil	VEPLMMDDLRACLAFIEALRRTEDMNFSKDEIKISGKKKIGDPIVCMVKAKKRNGDSSHATGQAYIYPDLVIVCIESVWKKSMEPTHPHHYEYLCV
Ga0316624_100217641	3300033486	Soil	IRASLAFIEALRRTEDMVFSRDDIIISEKIKMGDPVVCTIEARKGNGDSSHAKGKAFIYPDLVIICVESVWKTLSDPIHPHHYEYLSY
Ga0316621_106228892	3300033488	Soil	MSDNSTLFMIQLFSTYLLGECIEEGANMAPELTDDVRASQAFIEALRRTTDMIFSKEEIIISEKMKIGDPVICTIEAHRENGDSSYANGKAYIYSDLIVVCVESVCKAFMEPNHLHHYEYLSY
Ga0316621_107685671	3300033488	Soil	MGKSIVARKINDDVRASQAFIEALRRTADIAFSKEEIIISEKMKIGDPVICTIEAQKGNGDSSYAKGKAYIYSDLVIVCVESVSKKLMEPIYPHQYEYLSY
Ga0316628_1007401012	3300033513	Soil	VARKINDDIRASLAFIEALRRTEDMVFSRDDIIISEKIKMGDPVVCTIEARKGNGDSSHAKGKAFIYPDLVIICVESVWKTLSDPIHPHHYEYLSY
Ga0316616_1001603041	3300033521	Soil	MSPELIDDVRVCLALIEALRRTTDTVFFKEELIISEKRKIGDPVVCTIEAHKENGDSSRASGQAYIYSDLIVVCIESVCKALGEPTSPHHYEYLSY
Ga0316616_1020195201	3300033521	Soil	VTRKINDDMRASLAFIEALRRTEDMLFSRDDIIISEKKKMGDPVVCSIEARNGNGDSPHATGTAFIYPDLVIVCVESVWKTLGDPIYPHHYVYLDY
Ga0316617_1003455171	3300033557	Soil	MSPELIDDVRVCLAFIEALHRTTDTVFFKEELIISEKRKIGDPVVCTIEAHKENGDSSRASGQAYIYSDLIVVCIESVCKALGEPTSPHHYEYLSY
Ga0316617_1005127391	3300033557	Soil	FFIIFFSIAFCKTMSDNSTLFMIQLFSTYLLGECIEEGANMAPELTDDVRASQAFIEALRRTTDMIFSKEEIIISEKMKIGDPVICTIEAHRENGDSSHANGKAYIYSDLIVVCVESVCKAFMEPNHLHHYEYLSY
Ga0316617_1015354331	3300033557	Soil	VTRKINDDMRASLAFIEALRRTEDMHFSRHDIIISEKKKMGDPVVCSIEARNGNGDSPHATGTAFIYPDLVIVCVESVWKTLGDPIHPHHYVYLDY
Ga0316617_1026110561	3300033557	Soil	VMDIAIHERACQAFIEALRRSEDMVFAKDEIIIAEKKKIGDPVVCAMEAQKENGDSSCATGKAYVYGDLVIVCVESVGKNFSEPVYPHHYEYLSY
Ga0326723_0115260_557_847	3300034090	Peat Soil	VARKINDDIRASLAFIEALRRTEDMVFSRDDIIISEKKKMGDPVVCTIEARKGNGDSSRAKGKAFIYPDLVIVCVESVWKKSRDPIHPHHYEYLNF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084900

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences