Metagenome Family F085055

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085055
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	80 residues
Representative Sequence	MTKDTITSTRNALIKDTDHLKRDAGQIVEDVKKHASAHVEAVKDKANDTFDLARDFAKEHPLKLAAAAFFVGFIIGTFRRK
Number of Associated Samples	70
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.73 %
% of genes near scaffold ends (potentially truncated)	36.04 %
% of genes from short scaffolds (< 2000 bps)	82.88 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.162 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (33.333 % of family members)
Environment Ontology (ENVO)	Unclassified (48.649 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.351 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.56% β-sheet: 0.00% Coil/Unstructured: 28.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF05974	DUF892	45.05
PF01339	CheB_methylest	4.50
PF00501	AMP-binding	3.60
PF13596	PAS_10	2.70
PF01566	Nramp	2.70
PF05532	CsbD	1.80
PF13628	DUF4142	1.80
PF08238	Sel1	0.90
PF09137	Glucodextran_N	0.90
PF08281	Sigma70_r4_2	0.90
PF01965	DJ-1_PfpI	0.90
PF12779	WXXGXW	0.90
PF01841	Transglut_core	0.90
PF12762	DDE_Tnp_IS1595	0.90
PF05957	DUF883	0.90
PF02518	HATPase_c	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	45.05
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	9.01
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	2.70
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	1.80
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.90
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.16 %
Unclassified	root	N/A	37.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.16 %
Unclassified	root	N/A	37.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.16 %
Unclassified	root	N/A	37.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	15.32 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.84 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	15.32 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.90 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.84 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	11.71 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.84 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	11.71 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.84 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	9.91 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.80 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.84 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	9.91 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.80 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100115144	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300004092\|Ga0062389_100342094	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300005949\|Ga0066791_10071299	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300009093\|Ga0105240_10102244	All Organisms → cellular organisms → Bacteria	3483	Open in IMG/M
3300009500\|Ga0116229_10012529	All Organisms → cellular organisms → Bacteria	12208	Open in IMG/M
3300009500\|Ga0116229_10023500	All Organisms → cellular organisms → Bacteria	7484	Open in IMG/M
3300009500\|Ga0116229_10930254	Not Available	701	Open in IMG/M
3300009545\|Ga0105237_10222914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1886	Open in IMG/M
3300009662\|Ga0105856_1102713	Not Available	836	Open in IMG/M
3300009709\|Ga0116227_10072684	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	2921	Open in IMG/M
3300014169\|Ga0181531_10429009	Not Available	813	Open in IMG/M
3300014201\|Ga0181537_10055453	All Organisms → cellular organisms → Bacteria	2683	Open in IMG/M
3300014201\|Ga0181537_10572058	Not Available	771	Open in IMG/M
3300014201\|Ga0181537_10776616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	650	Open in IMG/M
3300014489\|Ga0182018_10161897	Not Available	1273	Open in IMG/M
3300014489\|Ga0182018_10739801	Not Available	511	Open in IMG/M
3300014495\|Ga0182015_10063160	All Organisms → cellular organisms → Bacteria	2655	Open in IMG/M
3300014495\|Ga0182015_10174958	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300014499\|Ga0182012_10035323	All Organisms → cellular organisms → Bacteria	4205	Open in IMG/M
3300014499\|Ga0182012_10178866	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300014501\|Ga0182024_10001937	All Organisms → cellular organisms → Bacteria	52182	Open in IMG/M
3300014501\|Ga0182024_12168951	Not Available	609	Open in IMG/M
3300014838\|Ga0182030_10507178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1201	Open in IMG/M
3300014838\|Ga0182030_10520872	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300014838\|Ga0182030_10717317	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300014838\|Ga0182030_10749630	Not Available	904	Open in IMG/M
3300014838\|Ga0182030_11147621	Not Available	669	Open in IMG/M
3300015203\|Ga0167650_1036495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1289	Open in IMG/M
3300015206\|Ga0167644_1015761	All Organisms → cellular organisms → Bacteria	3497	Open in IMG/M
3300019787\|Ga0182031_1329674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1904	Open in IMG/M
3300021405\|Ga0210387_11240950	Not Available	646	Open in IMG/M
3300021478\|Ga0210402_10113205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	2447	Open in IMG/M
3300021478\|Ga0210402_10121046	All Organisms → cellular organisms → Bacteria	2366	Open in IMG/M
3300021478\|Ga0210402_11639812	Not Available	570	Open in IMG/M
3300025913\|Ga0207695_10099833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2899	Open in IMG/M
3300025914\|Ga0207671_10130729	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1926	Open in IMG/M
3300027860\|Ga0209611_10049352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	3411	Open in IMG/M
3300027908\|Ga0209006_10450050	Not Available	1079	Open in IMG/M
3300028036\|Ga0265355_1004247	Not Available	1075	Open in IMG/M
3300028572\|Ga0302152_10320117	Not Available	511	Open in IMG/M
3300028745\|Ga0302267_10114870	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300028748\|Ga0302156_10285227	Not Available	745	Open in IMG/M
3300028759\|Ga0302224_10308240	Not Available	637	Open in IMG/M
3300028762\|Ga0302202_10365819	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300028766\|Ga0302269_1218830	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300028776\|Ga0302303_10042302	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300028776\|Ga0302303_10108632	All Organisms → cellular organisms → Bacteria → FCB group	1010	Open in IMG/M
3300028779\|Ga0302266_10202211	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300028780\|Ga0302225_10423092	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300028863\|Ga0302218_10098863	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300028873\|Ga0302197_10482507	Not Available	542	Open in IMG/M
3300028873\|Ga0302197_10514874	Not Available	521	Open in IMG/M
3300028909\|Ga0302200_10073794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1907	Open in IMG/M
3300029882\|Ga0311368_10167650	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300029882\|Ga0311368_10771973	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	657	Open in IMG/M
3300029883\|Ga0311327_10052809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3199	Open in IMG/M
3300029907\|Ga0311329_10336672	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300029911\|Ga0311361_10071201	All Organisms → cellular organisms → Bacteria	5268	Open in IMG/M
3300029911\|Ga0311361_10373696	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300029911\|Ga0311361_10958841	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300029913\|Ga0311362_10365401	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300029913\|Ga0311362_11086938	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300029915\|Ga0311358_10642937	Not Available	791	Open in IMG/M
3300029945\|Ga0311330_10999274	Not Available	618	Open in IMG/M
3300029952\|Ga0311346_10228372	Not Available	2027	Open in IMG/M
3300029953\|Ga0311343_10625533	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300029955\|Ga0311342_10162110	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300029955\|Ga0311342_10765611	Not Available	749	Open in IMG/M
3300029992\|Ga0302276_10428126	Not Available	539	Open in IMG/M
3300029999\|Ga0311339_10246294	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300030007\|Ga0311338_11206194	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300030007\|Ga0311338_11694058	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300030007\|Ga0311338_12005362	Not Available	514	Open in IMG/M
3300030020\|Ga0311344_10565909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	986	Open in IMG/M
3300030043\|Ga0302306_10192792	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300030051\|Ga0302195_10229562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	844	Open in IMG/M
3300030057\|Ga0302176_10477574	Not Available	504	Open in IMG/M
3300030399\|Ga0311353_10333377	Not Available	1381	Open in IMG/M
3300030503\|Ga0311370_11231717	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300030503\|Ga0311370_11360394	Not Available	754	Open in IMG/M
3300030503\|Ga0311370_12432332	Not Available	506	Open in IMG/M
3300030506\|Ga0302194_10445934	Not Available	502	Open in IMG/M
3300030507\|Ga0302192_10346831	Not Available	613	Open in IMG/M
3300030520\|Ga0311372_11429460	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300030580\|Ga0311355_10313546	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300030617\|Ga0311356_11161010	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300030618\|Ga0311354_10505600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1193	Open in IMG/M
3300030618\|Ga0311354_11181340	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300030688\|Ga0311345_10107230	All Organisms → cellular organisms → Bacteria	3154	Open in IMG/M
3300030688\|Ga0311345_10316370	Not Available	1463	Open in IMG/M
3300030688\|Ga0311345_10489696	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300031028\|Ga0302180_10495035	Not Available	600	Open in IMG/M
3300031233\|Ga0302307_10260153	Not Available	890	Open in IMG/M
3300031233\|Ga0302307_10432894	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300031234\|Ga0302325_11190302	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300031234\|Ga0302325_11265726	Not Available	974	Open in IMG/M
3300031234\|Ga0302325_11528408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	857	Open in IMG/M
3300031234\|Ga0302325_11959884	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300031236\|Ga0302324_101583092	Not Available	846	Open in IMG/M
3300031236\|Ga0302324_102316805	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	662	Open in IMG/M
3300031236\|Ga0302324_102328230	Not Available	660	Open in IMG/M
3300031236\|Ga0302324_102329535	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300031236\|Ga0302324_102762678	Not Available	592	Open in IMG/M
3300031236\|Ga0302324_102842457	Not Available	581	Open in IMG/M
3300031258\|Ga0302318_10070426	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300031258\|Ga0302318_10091399	Not Available	1340	Open in IMG/M
3300031524\|Ga0302320_11133314	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300031524\|Ga0302320_11762841	Not Available	593	Open in IMG/M
3300031524\|Ga0302320_12175390	Not Available	513	Open in IMG/M
3300031525\|Ga0302326_12388527	Not Available	667	Open in IMG/M
3300031525\|Ga0302326_12941036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.99%
Host-Associated	Host-Associated	9.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.49%
Plants	Host-Associated → Plants	9.01%
Aquatic	Environmental → Aquatic	4.50%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	64.86%
Soil	Environmental → Terrestrial → Soil	21.62%
Freshwater	Environmental → Aquatic → Freshwater	4.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.50%
Peat Moss	Host-Associated → Plants → Peat Moss	4.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	64.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.50%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.60%
Loam	Environmental → Terrestrial → Soil → Loam	1.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	64.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	14.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.50%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	4.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	33.33%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	31.53%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	7.21%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	4.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.60%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.60%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.90%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005949	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001151443	3300002245	Forest Soil	MTNDTITSTRDALIKDTNHLKQDAGQIVEDVRKHASAHVDAVKDKVNDTFDSARNCVKEHPLKLAVGALLIGFLIGTFRRK*
Ga0062389_1003420941	3300004092	Bog Forest Soil	MTKDTLASTRDALIKDADHLKQDAGQIVEDVKKHAVAHVDAVKDKVNDTFDLARNCVKEHPLKLAAGALLVGFLIGTFRRK*
Ga0066791_100712992	3300005949	Soil	MTNNKITDTRETLIKDTDHLKKDAGKIIEDVKKHASAHVEVVKDQVKDTFDLARDFVKERPLHFAAAALFIGFLIGTFRRK*
Ga0105240_101022447	3300009093	Corn Rhizosphere	MTNDTIASTRETLIKEDADHLKKDAGKIVEDVKKHASAHVDVVKDHVKDTFDLARDFVKERPLHLAATALLIGFLIGTFRRK*
Ga0116229_1001252913	3300009500	Host-Associated	MINDTVTSTRETLIKDADHLKQDAGQIVEDVKKHASAHVDAVKDRLNDSFDLARNCVKEHPLKLIAGSLLVGFLIGTFRRR*
Ga0116229_100235006	3300009500	Host-Associated	MTNNTITSTRKTLIKDADHLKQDAGQIVEDVKKHATAHVDAVRGQLSDTFDLARGYVKAHPLKLVAGAFLFGFIIGTFRRR*
Ga0116229_109302542	3300009500	Host-Associated	MIKDTITSTRDALVKDTDHLKKDAGQVVEDVKRHASAHVDAVKEQVSDTFDLARSFVKKHPLKLAVGALLIGFVIGTLRRK*
Ga0105237_102229142	3300009545	Corn Rhizosphere	MTNDTIASTRETLIKDADHLKKDAGKIVEDVKKHASAHVDVVKDRVKDTFDLARDFVKERPLHLAATALLIGFLIGTFRRK*
Ga0105856_11027132	3300009662	Permafrost Soil	MTNDKITDTREMLIKDTDHLKKDAGKIIEDVKKHASAHVEVVKDQVKDTFDLARDFVKERPLHFAAAALFIGFLIGTFRRK*
Ga0116227_100726843	3300009709	Host-Associated	MTHDKITSTRETLSKDADHLKREAGHMVEDLKKHASAHVDAAKDKLNDTFDLARNCIKEHPLKLIAGALLVGYFIGIFRRR*
Ga0181531_104290092	3300014169	Bog	MVTFINMTKDTLTSTRDAIIKDTDHLKRDAGQIVEDVKKHAVAHADAVKSKATDVVDLARNCAKEHPLKLAAATFFIGFFIGTFRRK*
Ga0181537_100554533	3300014201	Bog	MTKDTLTSTRNALIKDADHLKRDAGQIVEDVKKHASAHVNAVKDKANDTFDLARDFAKEHPLKLAVAALFIGFVIGTFRRK*
Ga0181537_105720582	3300014201	Bog	MVMFINMTKDPLTSTRDALIQDTDHLKRDAGQIVEDVKKHASAHVDAVKEKVNDTFDLARNCVKEHPLKLLAGALLLGFLIGTFRRK*
Ga0181537_107766161	3300014201	Bog	KTSIRKAPMTKDAVTSTRNAIIKDTDHLKRDAGQIVEDVKKHASAHVDAVKDKANDTFDLARDFAKEHPLKLVAAALFIGFVIGTFRRK*
Ga0182018_101618973	3300014489	Palsa	MTNDKITDTREMLIKDTDQLTKDAGKVVEGVKKHAFAHVDAVKDKANDTFDLARSFAKEHPLKLAAAALFIGFIIGTFRRK*
Ga0182018_107398011	3300014489	Palsa	MTNDNITSTRDTLIKDTDHLKQDAGQLVTDVKKHASAHVDAVKDKVSDTFDSARNFVKEHPLKVVSVAL
Ga0182015_100631604	3300014495	Palsa	MTKDTITSTRDTLLKDTDHLKQDAGQIVEDVKKHASAHVNAVKDKANDTFDFARNCAKEHPLKLAAGALLIGFLIGTFRRK*
Ga0182015_101749583	3300014495	Palsa	MTKDTVTSTRNTIIKDTDHLKRDAGQIIEDVKKHGAAHVDAVKNKANDTFDLAHDFAKEHPLKLAAAALFIGFVIGTFRRK*
Ga0182012_100353234	3300014499	Bog	MTKDTITSTRDALIKDTDHLKRDAGQIVEDVKKHASAHVSAVKDKANDTFDLARNCVKEHPLKLAAAAFVLGFLIGTYRRA*
Ga0182012_101788663	3300014499	Bog	MIKDTISSTRQSLIKDSHHLTQDAEQIVNDVKKHASAHVDAVKDKFNDAFDLARTTVKEHPLKVISGALLIGFLIGTFRRK*
Ga0182024_1000193734	3300014501	Permafrost	MTNDPITSTRNALIKDTDHLKQDAGKIIEDAKKHASAHVDAVKDKVNDTFDLARNCVKEHPLKLAGGALLIGFLIGTFRRK*
Ga0182024_121689511	3300014501	Permafrost	MTKDTLTSTRDALIKDADHLKRDAGKIVEDVKKHASAHVDAVKDKANDTFDLARNFAKEHPLKLVAAALFIGFLIGTFR
Ga0182030_105071781	3300014838	Bog	MTNNTITSTRETIIKDADHLKQDAGRIVEDVKKHASAHVDAVKDKANDTFDLARNFAKEHPLKFIAGSFLVGFLIGTFRRK*
Ga0182030_105208722	3300014838	Bog	MTNNTITSTRETLIKDADHLKQDAGQIIEDVKKHASAHVDAVKNKATDTFDLARNFAKEHPLKLAGTALFIGFLIGTFRRK*
Ga0182030_107173172	3300014838	Bog	MTKDTISSTRDALIKDTDHLKRDAGQIVEDVKKHASAHVNAVRDKANNTFDLARNLAKEHPLKLVVAALFIGFIVGTFRRK*
Ga0182030_107496301	3300014838	Bog	MTNNTITSTRETLIKDADHLKQDAGQIVEDVKKHATAHVDAVKDKVNDTFDLARKCVNEHPLKLVAGALLLGFLIGTFRRK*
Ga0182030_111476211	3300014838	Bog	MNNNTITSTRESLIKDADHLKKDAGQIVEDVKKHATAHVDAVKDKVNDTFDLARSFAKEHPLKLAAAALFIGFVIGTFRRK*
Ga0167650_10364951	3300015203	Glacier Forefield Soil	PKPPSQQNLMTNNTITSTRETLIKDTGHLKQDAGQIVEDVKKHASAHVDAVKDKVNDTFDLARNFAKEHPLKLAGTALFIGFLIGTFRRK*
Ga0167644_10157613	3300015206	Glacier Forefield Soil	MTNNKITDTREMLIKDTDHLTKDALKIVEDVKKHASAHVDAVKDKANDTFDLARSFAKEHPLKLAAAALFIGFIIGTFRRK*
Ga0182031_13296743	3300019787	Bog	MTNNTITSTRETLIKDADHLKQDAGQIIEDVKKHASAHVDAVKNKVNDTFDLARNCVNEHPLKLIVGALLVGFLIGTFRRK
Ga0210387_112409502	3300021405	Soil	MIKDALTSTREALIKDTDHLKRDAGQIVQDVKKHASAHVDAVKDKVNDTLDLARNCAKDHPLKLVAGALLIGFLIGTFRRK
Ga0210402_101132053	3300021478	Soil	MTQDTITSTRDALIKDADHLKQDAGQIVEDIKKHASAHVDAVKDKVTDTFDLVRNCAKEHVFKLAAAAFVVGFLMGTFRRK
Ga0210402_101210464	3300021478	Soil	MTNNKITDTRETLIKDTDHLKKDAGKIIEDVKKHAYAHVDVVKDQVKDTFDLARDFVKERPLHFAAAALFIGFLIGTFRRK
Ga0210402_116398121	3300021478	Soil	MTNNTITSTRDALIKDADHLKQDAGQIVEDVKKHATAHVDAVKDKVNDTFDLARNCAKEHVFKLAAAAFVVGFLMGTFRRK
Ga0207695_100998336	3300025913	Corn Rhizosphere	MTNDTIASTRETLIKEDADHLKKDAGKIVEDVKKHASAHVDVVKDHVKDTFDLARDFVKERPLHLAATALLIGFLIGTFRRK
Ga0207671_101307292	3300025914	Corn Rhizosphere	MTNDTIASTRETLIKDADHLKKDAGKIVEDVKKHASAHVDVVKDRVKDTFDLARDFVKERPLHLAATALLIGFLIGTFRRK
Ga0209611_100493522	3300027860	Host-Associated	MTNNTITSTRKTLIKDADHLKQDAGQIVEDVKKHATAHVDAVRGQLSDTFDLARGYVKAHPLKLVAGAFLFGFIIGTFRRR
Ga0209006_104500502	3300027908	Forest Soil	MTNDTITSTRDALIKDTNHLKQDAGQIVEDVRKHASAHVDAVKDKVNDTFDSARNCVKEHPLKLAVGALLIGFLIGTFRRK
Ga0265355_10042472	3300028036	Rhizosphere	MTKDTITSTRDALIKDTDHLKQDAGQIVEDVRKHASAHVDAVKDKVNDTFDLARNCAKEHPLKLAAAAFFIGFIIGTFRRK
Ga0302152_103201171	3300028572	Bog	MTKDTISSTRDALIKDTDHLKRDAGQIVEDVKKHASAHVNAVRDKANDTFDLARNLAKEHTLKLVVAALFIGFIVGTLRRK
Ga0302267_101148702	3300028745	Bog	MTKDTISSTRDALIKDTDHLKRDAGQIVEDVKKHASAHVNAVRDKANNTFDLARNLAKEHPLKLVVAALFIGFIVGTLRRK
Ga0302156_102852272	3300028748	Bog	MTNNTITSTRETLIKDADHLKQDAGQIVEDVKKHATAHVDAVKDKVNDTFDLARKCVNEHPLKLVAGALLLGFLIGTFRRK
Ga0302224_103082401	3300028759	Palsa	MTKDTITSTRNALIKDTDHLKRDAGQIVEDVKKHASAHVEAVKDKANDAFDLARNCAKEHPLKLVATAFFVGFIIGTFRRK
Ga0302202_103658192	3300028762	Bog	STYKNSLNTKHVMTKDTISSTRDALIKDTDHLKRDAGQIVEDVKKHASAHVNAVRDKANNTFDLARNLAKEHPLKLVVAALFIGFIVGTFRRK
Ga0302269_12188301	3300028766	Bog	KHVMTKDTISSTRDALIKDTDHLKRDAGQIVEDVKKHASAHVEAVKDKVNDTFDLARNFAKEHPLKLAATAFVVGFIIGTFRRK
Ga0302303_100423023	3300028776	Palsa	MTKDTVTSTRNAIIKDTDHLKRDAGQIIEDVKKHGAAHVDAVKDKANDTFDLARDFAKEHPLKLVAAALFIGFIIGTFRRK
Ga0302303_101086322	3300028776	Palsa	MTKDTLTSTRDAIIKDTDHLKRDAGQIVEDVKKHASAHVEAVKDKVNDTFDLARNFAKEHPLKLAATAFFVGFIIGTFRRK
Ga0302266_102022112	3300028779	Bog	MTKDTISSTRDALIKDTDHLKRDAGQIVEDVKKHASAHVNAVRDKANNTFDLARNLAKEHPLKLVVAALFIGFIVGTFRRK
Ga0302225_104230922	3300028780	Palsa	MLIKDTDHLKKDAGKIIEDVKKHASAHVEVVKDQVKDTFDLARDFVKERPLHFAAAALFIGFLIGTFRRK
Ga0302218_100988632	3300028863	Palsa	MTKDTITSTRNALIKDTDHLKRDAGQIVEDVKKHASAHVEAVKDKANDTFDLARDFAKEHPLKLAAAAFFVGFIIGTFRRK
Ga0302197_104825072	3300028873	Bog	MTKDTISSTRDALIKDTDHLKRDAGQIVEDVKKHASAHVNAVRDKANNTFDLARNLAKEHPLKLVVASLFIGFIVGTFRRK
Ga0302197_105148741	3300028873	Bog	MTKDTLTNVCDTLLKEADHLKRDAGQIIGEVTKQASAQVDTAKHKANDTFDLARNCAREHPLKIAAAALFIGFIIGAFRRK
Ga0302200_100737944	3300028909	Bog	SLNTKHVMTKDTISSTRDALIKDTDHLKRDAGQIVEDVKKHASAHVNAVRDKANNTFDLARNLAKEHPLKLVVAALFIGFIVGTFRRK
Ga0311368_101676501	3300029882	Palsa	MTKDTVISTRNAIIKDADHLKRDAGQIIEDVKKHASAHVNAVTGTANDTFDLVRDFAKEHPLKLAAAALFVGFIIGSFRRK
Ga0311368_107719732	3300029882	Palsa	DTDHLKKDTGKIIEDVKKHASAHVEVVKDQVKDTFDLARDFVKERPLHFAAAALFIGFLIGTFRRK
Ga0311327_100528096	3300029883	Bog	MTKDTISSTRDALIKDTDHLKRDAGQIVEDVKKHASAHVNAVRNKANDTFDLARNLAKEHPLKLVVAALFIGFIVGTFRRK
Ga0311329_103366723	3300029907	Bog	IKDTDHLKRDAGQIVEDVKKHASAHVNAVRDKANNTFDLARNLAKEHPLKLVVAALFIGFIVGTFRRK
Ga0311361_100712018	3300029911	Bog	MSKDTITSTRDAIIIDTDHLKRDAGQIIEDVKKHGTAHVDAVKDKVNDTFDLARNVAKEHPLKLAVVALFIGFVIGTFRRK
Ga0311361_103736962	3300029911	Bog	MTNNTITSTREALIKDADHLKEDAGQIVEDVKKHASAHVNAVKDKVNDTFDLARNCVNEHPLKIVAGAFLAGFLIGTFRRK
Ga0311361_109588411	3300029911	Bog	LTSTRNALIKDADHLKRDAGQVVEDVKKHASAHVNAVKDKANDAFDLARAFAQEHPLKLAVAALFIGFVIGTFRRK
Ga0311362_103654012	3300029913	Bog	MTNNTITSTREALIKDADHLKEDAGQIVEDVKKRASAHVDAVKDKVNDTFDLARNCVNEHPLKIVAGAFLAGFLIGTFRRK
Ga0311362_110869382	3300029913	Bog	TDHLKRDAGQIVDDVKKHAAAHVEVVKNKASDTFDLARACAKEHPLKLAAAAFFIGFIIGTFRRK
Ga0311358_106429372	3300029915	Bog	MTNNTITSTRETLIKDADHLKHDAGQIVADVKKHATAHVDAVKDKVNDTFDLARNVAKEHPLKLAAGALLVGFLIGTFCRK
Ga0311330_109992742	3300029945	Bog	MSTNTITSTREAILKDTDHLKHDAGQIVADVKKHATAHVEAVKARVNDTFDLARNCVNEHPLKLVGGALLIGFLIGTFSRK
Ga0311346_102283721	3300029952	Bog	RRRVKIINMTKDTLTSTRNALIKDADHLKRDAGQIVEDVKKHATAHVDAVKDKVNDTFDLARKCVNEHPLKLVAGALLLGFLIGTFRRK
Ga0311343_106255332	3300029953	Bog	MTKDTLTSTRNALIKDADHLKRDAGQIVEDVKKHASAHVNAVKDKANDTFDLARDFAKEHPLKLAVAALFIGFVIGTFRRK
Ga0311342_101621101	3300029955	Bog	STRNALIKDADHLKRDAGQVVEDVKKHASAHVDAVKDKANDAFDLACDFAKEHPLKLAVAALFIGFVIGTFRRK
Ga0311342_107656112	3300029955	Bog	MTKDTISSTRDALIKDTDHLKRDAGQIVEDVKKHASAHVNAVRDKANDTFDLARNLAKEHPLKLVVAALFIGFIVGTLRRK
Ga0302276_104281262	3300029992	Bog	LERKFFRLIVTLTNMTNDNIGSTRDTLIKDTDHLKQDAGKLVKDAKRHASAHVDAVKDKVNDTFDYARDCVKEHPLKVVSVALL
Ga0311339_102462941	3300029999	Palsa	MTKDTVTSTRNAIIKDSDHLKRDAGQIIEDVKKHGAAHVDAVKDKANDTFDLARDFAKEHPLKLVAAALFIGFIIGTFRRK
Ga0311338_112061941	3300030007	Palsa	FRKTPMTKDTVTSTRNAIIKDTDHLKRDAGQIIEDVRKHGAAHVDAVKDKANDTFDLVRDFAKEHPLKLAAAAVFIGFVIGTFRRK
Ga0311338_116940582	3300030007	Palsa	AARVNFSLTQKLPIRKTPMTKDSVTSTRNAIIKDTDHLRRDAGQIIEDVKKHGAAHVDAVKNKANDTFDLAHDFAKEHPLKLAAAALFIGFIIGTFRRK
Ga0311338_120053621	3300030007	Palsa	MTKDTLTSTRDALIKDTDHLKRDAGQIVEDAKKHAVAHVDAVKNKANETFDLVHCCAKEHPLKLAAFALFIGFIIGTFRRK
Ga0311344_105659093	3300030020	Bog	TNTITSTREAILKDTDHLKHDAGQIVADVKKHATAHVEAVKARVNDTFDLARNCVNEHPLKLVGGTLLIGFLIGTFSRK
Ga0302306_101927922	3300030043	Palsa	MTKDTVTSTRNAIIKDTDHLKRDAGQIIEDLKKHGAAHVDAVKDKANDTFDLARDFAKEHPLKLVAAALFIGFIIGTFRRK
Ga0302195_102295621	3300030051	Bog	RDAGQIIGEVTKQASAQVDTAKHKANDTFDLARNCAREHPLKIAAAALFIGFIIGAFRRK
Ga0302176_104775742	3300030057	Palsa	MTNDTITSTRNALIKDTDHLKQDAGQIVEDVKKHASAHVEAVKDKVNDTFDLARNFAKEHPLKLAATAFFVGFIIGTFRRK
Ga0311353_103333772	3300030399	Palsa	MLIKDTDHLKKDAGKIIEDVKKHASAHVEVVKDQVKDTFDLARDFVKERPLHFAAAALFIGFLIGTIRRK
Ga0311370_112317172	3300030503	Palsa	RTKNSLFRKAPMTKDTVTSTRNAIIKDTDHLKRDAGQIIEDVKKHGAAHVDAVKDKANDTFDLARDFAKEHPLKLAAAALFIGFIIGTFRRK
Ga0311370_113603942	3300030503	Palsa	MTKDTISSTRDALIKDTDHLKRDAGQIVVDVKKHASAHVNAVRDKANDTFDLARNLAKEHPLKLVVAALFIGFIVGTFRRK
Ga0311370_124323322	3300030503	Palsa	TRNALIKDTDHLKQDAGQIVEDVKKHASAHVDAVKDRVNDTFDLARNCVKEHPLKLAVGALLIGFLIGTFRRK
Ga0302194_104459342	3300030506	Bog	AILKDTDHLKHDAGQIVADVKKHATAHVEAVKARVNDTFDLARNCVNEHPLKLVGGTLLIGFLIGTFSRK
Ga0302192_103468313	3300030507	Bog	MTNNTITSTREALIKDADHLKEDAGQIVEDVKKRASAHVDAVKDKVNDTFDLARNCVNEHPLKIVAG
Ga0311372_114294601	3300030520	Palsa	IKDSDHLKRDAGQIIEDVKKHGAAHVDAVKDKANDTFDLARDFAKEHPLKLVAAALFIGFIIGTFRRK
Ga0311355_103135461	3300030580	Palsa	AIIKDTDHLKRDAGQIIEDVRKHGAAHVDAVKDKANDTFDLARDFAKEHPLKLVAAALFIGFIIGTFRRK
Ga0311356_111610101	3300030617	Palsa	IHPIGEVGSRRMVTFINMTKDTLTSTRDAIIKDTDHLKRDAGQIVEDVKKHASAHVEAVKDKVNDTFDLARNFAKEHPLKLAATAFFVGFIIGTFRRK
Ga0311354_105056001	3300030618	Palsa	KTLNPKDPMTKDTVTSTRNAIIKDTDHLKRDAGQIIEDVKKHGAAHVDAVKDKANDTFDLARDFAKEHPLKLVAAALFIGFIIGTFRRK
Ga0311354_111813402	3300030618	Palsa	KLVPGVRSCYMTKDTLTSTRDALIKDTDHLKRDAGQIIEDVKKHASAHVEAVKDKANDAFDLARNCAKEHPLKLVATAFFVGFIIGTFRRK
Ga0311345_101072305	3300030688	Bog	MTNDNIGSTRDTLIKDTDHLKQDAGKLVKDAKRHASAHVDAVKDKVNDTFDYARDCVKEHPLKVVSVALLIGF
Ga0311345_103163703	3300030688	Bog	MTKDTLTSTRNALIKDADHLKRDAGQIVEDVKKHATAHVDAVKDKVNDTFDLARKCVNEHPLKLVAGALLLGFLIGTFRRK
Ga0311345_104896961	3300030688	Bog	KTLFQQKLMTNNTITSTREALIKDADHLKEDAGQIVEDVKKRASAHVDAVKDKVNDTFDLARNCVNEHPLKIVAGAFLAGFLIGTFRRK
Ga0302180_104950351	3300031028	Palsa	MTKDTVTSTRNAIIKDTDHLRRDAGQIIEDVKKHGAAHVDAVKNKANDTFDLAHDFAKEHPLKLAAAALFIGFIIGT
Ga0302307_102601532	3300031233	Palsa	MTKDTVTSTRNAIIKDTDHLKRDAGQIIEDVKKHGAAHVDAVKDKANDTFDLAREFAKEHPLKLVAAALFIGFIIGTFRRK
Ga0302307_104328942	3300031233	Palsa	LIQKLPTRKTSMTKDTVISTRNAIIKDADHLKRDAGQIIEDVKKHASAHVNAVTGTANDTFDLVRDFAKEHPLKLAAAALFVGFIIGSFRRK
Ga0302325_111903022	3300031234	Palsa	MTNDNITSTRDTLIKDTDHLKQDAGQLVTDVKKHASAHVDAVKDKVSDTFDSARDFVKEHPLKVVSVALLVG
Ga0302325_112657261	3300031234	Palsa	MTKDTVTSTRNAIIKDSDHLKRDAGQIIEDVKKHGAAHVDAVKDKANDTFDLAREFAKEHPLKLVAAALFIGFIIGTFRRK
Ga0302325_115284082	3300031234	Palsa	MTNDTITSTRNALIKDTDHLKQDAGQIVEDVKKHASAHVDAVKDRVNDTFDLARNCVKEHPLKLTVGALLIGFLIGTFRRK
Ga0302325_119598841	3300031234	Palsa	MTKDTVTSTRNAIIKDTDHLKRDAGQIIEDVKKHGAAHVDAVKDKANDTFDLARDFAKEHPLKLAAAALFIGFIIGTFRRK
Ga0302324_1015830922	3300031236	Palsa	MTKDTLTSTRDALIKDTDHLKRDAGQIIEDVKKHAVAHVDAVKNKANDTFDLARDFAKEHPLKLAAAAFFVGFIIGTFRRK
Ga0302324_1023168052	3300031236	Palsa	TITSTRKTLIKDADHLKQDAGQIVQDVKKHAAAHVGAVKDKVNDTFDLACSFAKEHPLKLIAGSFLAGFLLGTFRRK
Ga0302324_1023282302	3300031236	Palsa	MTNNKITDTRETLIKDTEHLKKDAVKIVEDVKKHASAHVDVVKDQVKDTFDLARDFVKERPLHFAAAALFIGFLIGTFRRK
Ga0302324_1023295351	3300031236	Palsa	KDTDHLRRDAGQIIEDVKKHGAAHVDAVKNKANDTFDLAHDFAKEHPLKLAAAALFIGFIIGTFRRK
Ga0302324_1027626782	3300031236	Palsa	MTKDTISSTRDALIKDTDHLKRDAGQIVVDVKKHASAHVNAVRDKANDTFDLARNLAKEHPLKLVVAALFIGFIVG
Ga0302324_1028424572	3300031236	Palsa	LERIFFRLIVTLTNMTNDNISSTRDTLIKDTDHLKQDAGKLVKDAKRHASAHVDAVKDKVNDTFDYARDCVKEHPLKVVSV
Ga0302318_100704263	3300031258	Bog	MTKDTISSTRDALIKDTDHLKRDAGQIVEDVKKHASAHVEAVKDKVNDTFDLARNFAKEHPLKLAATAFVVGFIIGTFRRK
Ga0302318_100913993	3300031258	Bog	MTKDTLTSTRNALIEDADHLKRDAGQIVEDVKKHATAHVDAVKDKVNDTFDLARKCVNEHPLKLVAGALLLGFLIGTFRRK
Ga0302320_111333141	3300031524	Bog	KDADHLKQDAGQIVDDVKKHASARVDAVKDKVNDTFDLARGFAKEHPLKLAAAALFIGFVIGTFRRK
Ga0302320_117628411	3300031524	Bog	MTNNTLISTRETLIKDADHLKQDAGQIVEDVKKHASAHVDAVKDKVNDTFDLARNCVKEHPLKLLAGALLVGFLIGTFGRK
Ga0302320_121753902	3300031524	Bog	TRETLIKDADHLKHDAGQIVADVKKHATAHVDAVKDKVNDTFDLARNVAKEHPLKLAAGALLVGFLIGTFCRK
Ga0302326_123885272	3300031525	Palsa	TNNTLASTREALIKDTDHLKRDAGQIVEDVKKHASAHVAAVKDKAADTFDLARDFAKEHPLKLVAAALFIGFIIGTFRRK
Ga0302326_129410362	3300031525	Palsa	SSSGDGCQWGVDPIGEVGSRRRFIIINMTKDTLTSTRNALIKDADHLKRDAGQIVENVKKHASAHVNAVKDKANDTFDLARDFAKEHPLKLAVAALFIGFVIGTFRRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085055

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences