Metagenome / Metatranscriptome Family F085057

Basic Information
Family ID	F085057
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	55 residues
Representative Sequence	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPRYWSWVLDHLVAVNKVSKVSQVKQ
Number of Associated Samples	89
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Eukaryota
% of genes with valid RBS motifs	74.55 %
% of genes near scaffold ends (potentially truncated)	49.55 %
% of genes from short scaffolds (< 2000 bps)	97.30 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Most Common Taxonomy
Group	Eukaryota (78.378 % of family members)
NCBI Taxonomy ID	2759
Taxonomy	All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (52.252 % of family members)
Environment Ontology (ENVO)	Unclassified (79.279 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (70.270 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.35% β-sheet: 0.00% Coil/Unstructured: 57.65%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF10536	PMD	4.50

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	25.23 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	25.23 %
Unclassified	root	N/A	21.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005347\|Ga0070668_100088909	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	2432	Open in IMG/M
3300005365\|Ga0070688_101422048	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	563	Open in IMG/M
3300005544\|Ga0070686_101903561	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	508	Open in IMG/M
3300005617\|Ga0068859_102729886	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	542	Open in IMG/M
3300005719\|Ga0068861_100633622	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	985	Open in IMG/M
3300009092\|Ga0105250_10502897	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	550	Open in IMG/M
3300009101\|Ga0105247_11835955	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	505	Open in IMG/M
3300009553\|Ga0105249_12348309	Not Available	606	Open in IMG/M
3300009553\|Ga0105249_13107242	Not Available	533	Open in IMG/M
3300009972\|Ga0105137_108316	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	551	Open in IMG/M
3300009980\|Ga0105135_112606	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	671	Open in IMG/M
3300009981\|Ga0105133_124842	Not Available	548	Open in IMG/M
3300009990\|Ga0105132_104949	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	947	Open in IMG/M
3300009992\|Ga0105120_1043959	Not Available	556	Open in IMG/M
3300009994\|Ga0105126_1007502	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	976	Open in IMG/M
3300009994\|Ga0105126_1030014	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	635	Open in IMG/M
3300010397\|Ga0134124_12145246	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	598	Open in IMG/M
3300010397\|Ga0134124_12337758	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	575	Open in IMG/M
3300010397\|Ga0134124_12804987	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	531	Open in IMG/M
3300010401\|Ga0134121_11510130	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	687	Open in IMG/M
3300010403\|Ga0134123_10486988	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	1157	Open in IMG/M
3300013306\|Ga0163162_11082749	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	908	Open in IMG/M
3300014325\|Ga0163163_11019840	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	891	Open in IMG/M
3300014325\|Ga0163163_12781069	Not Available	546	Open in IMG/M
3300014326\|Ga0157380_10560147	Not Available	1123	Open in IMG/M
3300014968\|Ga0157379_12482683	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	518	Open in IMG/M
3300015278\|Ga0182099_1010047	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	859	Open in IMG/M
3300015280\|Ga0182100_1088965	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	524	Open in IMG/M
3300015280\|Ga0182100_1091483	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	519	Open in IMG/M
3300015284\|Ga0182101_1036739	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	703	Open in IMG/M
3300015290\|Ga0182105_1081258	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	559	Open in IMG/M
3300015293\|Ga0182103_1022667	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	806	Open in IMG/M
3300015293\|Ga0182103_1045731	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	657	Open in IMG/M
3300015306\|Ga0182180_1096172	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	500	Open in IMG/M
3300015310\|Ga0182162_1065757	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	647	Open in IMG/M
3300015310\|Ga0182162_1084203	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	592	Open in IMG/M
3300015310\|Ga0182162_1101828	Not Available	551	Open in IMG/M
3300015311\|Ga0182182_1043740	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	722	Open in IMG/M
3300015315\|Ga0182120_1121396	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	531	Open in IMG/M
3300015316\|Ga0182121_1108128	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	570	Open in IMG/M
3300015316\|Ga0182121_1129775	Not Available	528	Open in IMG/M
3300015320\|Ga0182165_1041241	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	809	Open in IMG/M
3300015325\|Ga0182148_1057661	Not Available	709	Open in IMG/M
3300015325\|Ga0182148_1138286	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	514	Open in IMG/M
3300015326\|Ga0182166_1065954	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	675	Open in IMG/M
3300015326\|Ga0182166_1078631	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	635	Open in IMG/M
3300015326\|Ga0182166_1130605	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	525	Open in IMG/M
3300015327\|Ga0182114_1139306	Not Available	536	Open in IMG/M
3300015330\|Ga0182152_1149427	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	510	Open in IMG/M
3300015331\|Ga0182131_1101513	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	598	Open in IMG/M
3300015334\|Ga0182132_1073256	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	707	Open in IMG/M
3300015335\|Ga0182116_1165796	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	521	Open in IMG/M
3300015338\|Ga0182137_1133095	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	573	Open in IMG/M
3300015339\|Ga0182149_1100332	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	633	Open in IMG/M
3300015340\|Ga0182133_1036854	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	961	Open in IMG/M
3300015340\|Ga0182133_1067406	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	775	Open in IMG/M
3300015348\|Ga0182115_1262902	Not Available	548	Open in IMG/M
3300015349\|Ga0182185_1180143	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	636	Open in IMG/M
3300015349\|Ga0182185_1239040	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	552	Open in IMG/M
3300015350\|Ga0182163_1120619	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	806	Open in IMG/M
3300015352\|Ga0182169_1214468	Not Available	628	Open in IMG/M
3300015353\|Ga0182179_1144516	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	738	Open in IMG/M
3300015354\|Ga0182167_1213337	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	704	Open in IMG/M
3300017408\|Ga0182197_1041331	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	823	Open in IMG/M
3300017408\|Ga0182197_1080508	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	640	Open in IMG/M
3300017414\|Ga0182195_1202638	Not Available	522	Open in IMG/M
3300017435\|Ga0182194_1121355	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	551	Open in IMG/M
3300017439\|Ga0182200_1052848	Not Available	745	Open in IMG/M
3300017445\|Ga0182198_1138364	Not Available	585	Open in IMG/M
3300017446\|Ga0182217_1141776	Not Available	565	Open in IMG/M
3300017447\|Ga0182215_1045005	Not Available	934	Open in IMG/M
3300017447\|Ga0182215_1047369	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	912	Open in IMG/M
3300017447\|Ga0182215_1173322	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	503	Open in IMG/M
3300022465\|Ga0213505_115490	Not Available	623	Open in IMG/M
3300025903\|Ga0207680_10499623	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	866	Open in IMG/M
3300025961\|Ga0207712_11665891	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	572	Open in IMG/M
3300026035\|Ga0207703_10909502	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	843	Open in IMG/M
3300026088\|Ga0207641_11959851	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	587	Open in IMG/M
3300028049\|Ga0268322_1030023	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	625	Open in IMG/M
3300028050\|Ga0268328_1070455	Not Available	506	Open in IMG/M
3300028052\|Ga0268300_1011962	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	505	Open in IMG/M
3300028055\|Ga0268338_1003563	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1039	Open in IMG/M
3300028056\|Ga0268330_1050216	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	545	Open in IMG/M
3300028057\|Ga0268352_1031142	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	586	Open in IMG/M
3300028064\|Ga0268340_1040428	Not Available	664	Open in IMG/M
3300028139\|Ga0268355_1004455	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	779	Open in IMG/M
3300028147\|Ga0268303_105151	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	564	Open in IMG/M
3300028150\|Ga0268343_1004164	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	856	Open in IMG/M
3300028153\|Ga0268320_1011458	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	671	Open in IMG/M
3300028248\|Ga0268312_1013850	Not Available	694	Open in IMG/M
3300028248\|Ga0268312_1017043	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	652	Open in IMG/M
3300028464\|Ga0268302_102311	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	786	Open in IMG/M
3300028464\|Ga0268302_105745	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	582	Open in IMG/M
3300028466\|Ga0268321_102084	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	816	Open in IMG/M
3300028471\|Ga0268323_1019943	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	520	Open in IMG/M
3300028473\|Ga0268319_1006707	Not Available	743	Open in IMG/M
3300028473\|Ga0268319_1024533	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	503	Open in IMG/M
3300028474\|Ga0268331_1002739	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	984	Open in IMG/M
3300028523\|Ga0268313_1000430	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1511	Open in IMG/M
3300028526\|Ga0268339_1006711	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	694	Open in IMG/M
3300032591\|Ga0214484_1069291	Not Available	745	Open in IMG/M
3300032689\|Ga0214497_1066577	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	799	Open in IMG/M
3300032689\|Ga0214497_1105696	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	608	Open in IMG/M
3300032699\|Ga0214494_1049216	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	812	Open in IMG/M
3300032759\|Ga0314720_1046740	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	517	Open in IMG/M
3300032760\|Ga0314754_1059391	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	596	Open in IMG/M
3300032812\|Ga0314745_1011030	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	1691	Open in IMG/M
3300032823\|Ga0314723_1111018	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	505	Open in IMG/M
3300032844\|Ga0314743_1030410	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1231	Open in IMG/M
3300033526\|Ga0314761_1001824	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	2965	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	93.69%
Environmental	Environmental	6.31%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	93.69%
Terrestrial	Environmental → Terrestrial	6.31%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	72.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.11%
Soil	Environmental → Terrestrial → Soil	6.31%
Unclassified	Host-Associated → Plants → Unclassified	6.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.50%
Roots	Host-Associated → Plants → Roots	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	72.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.31%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	6.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.50%
Loam	Environmental → Terrestrial → Soil → Loam	1.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	72.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.31%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	6.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	52.25%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	20.72%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	6.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009972	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_224 metaG	Host-Associated	Open in IMG/M
3300009980	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaG	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009990	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300009994	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015278	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015284	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015306	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015316	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015320	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015326	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015334	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015338	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017408	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017435	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017439	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017446	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300022465	Metatranscriptome of phyllosphere microbial comminities from switchgrass, Michigan, USA - G5R1_MAIN_12JUL2016_LR1 MT pilot (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028049	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028050	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028052	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028055	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028056	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028057	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028139	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028147	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028150	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028153	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028248	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028463	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028464	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028466	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028471	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028473	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028474	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028523	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028526	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300032591	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032689	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032699	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032759	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_15MAY2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032760	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032812	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032823	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_05JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032844	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033526	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085057

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070668_1000889092	3300005347	Switchgrass Rhizosphere	VSLAEQSLSLSSLAVIPCKREHQGQMEESGMVPRYWLQVLDHLVAVSNISKD*
Ga0070688_1014220481	3300005365	Switchgrass Rhizosphere	RPTGVSLAEQSLSLSSLAVISCKKEHQARLGESGMAPRYLSWVLDHLVAASKVSKVSQEKWERA*
Ga0070686_1019035611	3300005544	Switchgrass Rhizosphere	VSLAEQSLSLSSLVVIPCKKEHQGQLGESGMAPRYLSWVLDHLVAASKVSKVSQEKWERV
Ga0068859_1027298862	3300005617	Switchgrass Rhizosphere	VSLAEQSLSLSSLAVIPCKREHQGRLGESGMAPHYLSWVLDHLVAASKVSKVSQEKWEKA
Ga0068861_1006336222	3300005719	Switchgrass Rhizosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPRYWSWVLDHLVAVNKVSKVSQVKQ*
Ga0105250_105028972	3300009092	Switchgrass Rhizosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPRYLSWVLDHLVAASKVSKVSQEKWERT
Ga0105247_118359551	3300009101	Switchgrass Rhizosphere	KLVFAWKPTEVSLAEQSLLLFSLVVIICRRVHQEQLEESGMAPRYWSWVLDHLVAVNKVSKVSQVKQ*
Ga0105249_123483092	3300009553	Switchgrass Rhizosphere	MSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPHYWSWVLDHLVAVNKVSKVSQVKQ
Ga0105249_131072422	3300009553	Switchgrass Rhizosphere	MAEQSLSLSSLAVIPCKREHQGRMEESGMAPRYLSWVLDHLVAASKVSKVSKEKWERG*
Ga0105137_1083161	3300009972	Switchgrass Associated	VSLVEQSLSLSSSMAIPCKEEHQGQLEESGMAPRYWLQVLDHLVAISKMSKD*
Ga0105135_1126061	3300009980	Switchgrass Associated	LSSLAVIPCKREHQGRSGESGMAPCYLSWVLDHLVAASKVSKVSQEKWERA*
Ga0105133_1248421	3300009981	Switchgrass Associated	VSLAEHSLSLSSLVVIPCKKEHQGQLGESGMAPRYLSWDLDHLVATSKVSKVSQEKWERA
Ga0105132_1049492	3300009990	Switchgrass Associated	VFAWKPTEVSLAEQSLSLSSLVVTLCKRVHQEQLEESGMVPRYWSWVLDHLVAVREVSKD
Ga0105120_10439592	3300009992	Switchgrass Associated	VSLAEQSLSLSSLEVIPCKKEHQGRLGESGMAPRYWSWVLDHLVVVNKVSKVSQ
Ga0105126_10075021	3300009994	Switchgrass Associated	VSLAEQSLLLSSLAVIPCKKEHQGRLGESGMAPRYLSWVLDHLVAASKVSKVSQEKWERA
Ga0105126_10300142	3300009994	Switchgrass Associated	MSLAEQSLLLSSLAVISCKKEHQGQSGESRMVPRYWSWVLNHLVAARKVSRVSQVKQKRVQKE*
Ga0134124_121452461	3300010397	Terrestrial Soil	VSLAEQSLSLSSLAVIPCKREHQGRMEESGMVSCYWLQVLDHLVAVHNVSKDKPRKGL
Ga0134124_123377581	3300010397	Terrestrial Soil	QSLSLSSLAVIPFKKEHQGRLGESGMVPRYRSWVLDHLVAVNKVSKVNQVKQ*
Ga0134124_128049872	3300010397	Terrestrial Soil	VSLAEQSLSLSSLAVIPCKREHQGRLGESGMAPRYLSWVLDHLVAASKVSKVSQEKWERA
Ga0134121_115101302	3300010401	Terrestrial Soil	GVSLAEQPLLLSSLTAIPCKKEHQGWLEGSGMAPRYWSWVLDHLVAVSKVSRVSQVKW*
Ga0134123_104869882	3300010403	Terrestrial Soil	LSLSSLVVIPCKKEHQGWLGESGMAPRYWSWVLDHLVAVNKVSKVSQVKQ*
Ga0163162_110827491	3300013306	Switchgrass Rhizosphere	VSLAEQSLSLSSLAVIPYKREHQGRLGESGMAPRYWSWVLDHFVAASKVSKVSQEKWERA
Ga0163163_110198401	3300014325	Switchgrass Rhizosphere	MPAGVSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPRYWSWVLDHLVAVNKVSKVSQVKQ*
Ga0163163_127810691	3300014325	Switchgrass Rhizosphere	VSLAEQSLSLSSSMEIPCKKERQGQLEESRMAPRYWLQVLDHL
Ga0157380_105601472	3300014326	Switchgrass Rhizosphere	VSLAEQSLSLSSLAVIPCKREHQWWMEESGMAPRYLSWVLDHLVAASKVSKVSQEKWERA
Ga0157379_124826832	3300014968	Switchgrass Rhizosphere	VSLAEQSLSLSSLAVIPCKKEQQERLGESGMAPRYLSWVLGHLVAASKVSKVSQEKWERT
Ga0182099_10100471	3300015278	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKEDQGRLGESEMAPRYWSWVLDHLVAVNKVSKVSQVKQ*
Ga0182100_10889651	3300015280	Switchgrass Phyllosphere	VSLAEQSLSLSSLTVIPCKREHQGRMEESGMIPRYWLQVLDHLVAVREVSKD*
Ga0182100_10914831	3300015280	Switchgrass Phyllosphere	VSLAEQSLLLSSLAVIPCKKEHQGRLEGSGMAPRYWSWVLDHLVAVSKVSRVSQVKW
Ga0182101_10367393	3300015284	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKREHQGRMEESGMVPRYWLQVLDHLVAV
Ga0182105_10812581	3300015290	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGWLGESGMAPRYLSWVLDHLVAASKVSKVSQEKWERAQKE*
Ga0182103_10226672	3300015293	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKREHQGRLGESGMAPHYLSWVLDHLVAASKVSKVSQEKWEWA
Ga0182103_10457311	3300015293	Switchgrass Phyllosphere	VNIAEQSLLLSSLVVIPCKKEHQGRLEGSRMAPRHWSWGLDHLVAVGKV
Ga0182180_10961721	3300015306	Switchgrass Phyllosphere	PTGVSLAEQPLLLSSLTVIPCKKEHQGRLEGSGMAPRYWSRVLDHLVAVNKVSRVSQVK*
Ga0182162_10657572	3300015310	Switchgrass Phyllosphere	VSLAEQSLSLSLLAVIPCKKEHQGRLGESGMAPHYWSWVLDHLVAVNKVSKVSQVKQ*
Ga0182162_10842031	3300015310	Switchgrass Phyllosphere	VSLAEQSLLLSSWVVIPYKKEHQGRLEGSRMAPRYWSWVLDHLVAVGKVSRVSQ
Ga0182162_11018281	3300015310	Switchgrass Phyllosphere	VSLAEQSLSLSLLMVIPYKKEHQGRLGESGMAPRYWSWVLGHLVAVNKVSKVSQVKQ*
Ga0182182_10437402	3300015311	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGQLGESGMTPRYWSWVLDHFVAVNKVSKVSQVKQ*
Ga0182120_11213961	3300015315	Switchgrass Phyllosphere	EVSLAEQSLSLSSLVVILCRRVHQEQLEESGMAPQCWSWVLDHLVAANRVS*
Ga0182121_11081281	3300015316	Switchgrass Phyllosphere	LVVIPCKREHQGRMEESGMAPCYLSWVLDRLVAASKVGKVSQERWKRA*
Ga0182121_11297751	3300015316	Switchgrass Phyllosphere	VSLAEQSLSLSSLVVIPCKKEHQGRLGESGMAPHYWSWVLDHLVAVNKVSKVSQVKQ*
Ga0182165_10412413	3300015320	Switchgrass Phyllosphere	VSLAEQSLLLSSSAVIPCKREHQGRMEESGMVPRYWLQVLDHLVAVSNVSK
Ga0182148_10576612	3300015325	Switchgrass Phyllosphere	VSLAEQSLSLFFIGGDPLQKKYQGRLGESGMAPRYWSWVLDHLVAVNKVSKVSQVKQ*
Ga0182148_11382862	3300015325	Switchgrass Phyllosphere	MSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPRYWSWVLDHLVAVNKVSKVSQVKQ*
Ga0182166_10659541	3300015326	Switchgrass Phyllosphere	VSLAEQSLLLSSLAVIPCKKEHQGRLEGSRMAPCYWSWILYHLVAVGKV
Ga0182166_10786311	3300015326	Switchgrass Phyllosphere	VSLVEQSLSLSSFVVIPCKKEHQGQLEESGMASHYWLQVLDHLVAVGKVSKE*
Ga0182166_11306052	3300015326	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESEMAPRYLPWVLDHLVAASKVSKVSQEKWERG
Ga0182114_11393061	3300015327	Switchgrass Phyllosphere	VSLTEQSLSLSSLVVIPCKKEHQGRLGESGMAPRYWSWVLDHLV
Ga0182152_11494271	3300015330	Switchgrass Phyllosphere	KPTGVSLAEQSLLLSSLAVIPCKKEHQGRLEGSGMAPRYWSWVLDHLVAVSKVSRVSQVKW*
Ga0182131_11015132	3300015331	Switchgrass Phyllosphere	VSLAEKSLSLSSLAVIPCKREHQGRMEESGMAPRYLSWDLDHLVATSKVSKVSQEKWERA
Ga0182132_10732561	3300015334	Switchgrass Phyllosphere	LSSLAVIPCKKGHQGRLGESGMVLDHLVAVNKVSKVSQVKQ*
Ga0182116_11657961	3300015335	Switchgrass Phyllosphere	TGVSLAEQSLSLSSLAVIPCKGEHQGRMEESGMAPHYLSWVLDHLVAASKVSRVSQEKSERA*
Ga0182137_11330951	3300015338	Switchgrass Phyllosphere	VSLAEQSLSLSSLAMIPCKKEHQGRMEESRMVPRYLSWVLDHLVAASKVSKVSQ*
Ga0182149_11003322	3300015339	Switchgrass Phyllosphere	MPTGVSLAEQSLSLSSLAVIPCKREHQGRMGESGMVPHYWLQVLDQLVAVSNV
Ga0182133_10368542	3300015340	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKEQQGQLGESGMTPRYWSWVLDHLVAVNKVSKVSQVKQ*
Ga0182133_10674061	3300015340	Switchgrass Phyllosphere	VSLAKQLLSLSSLVVIPCKKEHQGRFGESGMAPRYLSWVLDHLV
Ga0182115_12629021	3300015348	Switchgrass Phyllosphere	MPTGVSLAEQTLLLSSLMEIPCKRGHQEQLGESGMVPRYWLQVL
Ga0182185_11801431	3300015349	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKREHQGRMEESGMVPRYWLQVLDHLVAVSN
Ga0182185_12390401	3300015349	Switchgrass Phyllosphere	SSLAVIPCKKEHQELLEGSGMAPHYWSWVLDHLVPVSKVSRVSQVK*
Ga0182163_11206192	3300015350	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPHYWSWVLDHLVAVNKVSKVSQVKQ*
Ga0182169_12144681	3300015352	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKREHQGRMEESGMAPRYLSWVLDCLVAASEVSNVSQVKQ*
Ga0182179_11445161	3300015353	Switchgrass Phyllosphere	VSLAEQSLLLSSLAVIPCKREHQGRMEESRMVPRYLSWVLDHLVAASKVSKV
Ga0182167_12133372	3300015354	Switchgrass Phyllosphere	VSLAKQSLSLSSLAVIPCKKEHQGQLGESGMTPRYWSWVLDHFVAVNKVSKVSQVKQ*
Ga0182197_10413312	3300017408	Switchgrass Phyllosphere	VSLAEQSLSLSSLMVIPYKKEHQGRLGESGMAPRYWSWVLDHLVAVNKVSKVSQVKQ
Ga0182197_10805081	3300017408	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKREHQVRMEESGMTPRYLSWVLDHLVAASKVSNVSQVKL
Ga0182195_12026381	3300017414	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKERQERLEGSRMAPHYLSWVLDHLVAIGKVS
Ga0182194_11213552	3300017435	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGQLGESGMTPRYWSWVLDHFVAVNKVSKVSQVKQ
Ga0182200_10528481	3300017439	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKEQQGQLGESGMTPRYWSWVLDHLVPVNKVSKVSQVKQ
Ga0182198_11383642	3300017445	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPHYLSWVLDHLVAASKVSKVSQEK
Ga0182217_11417762	3300017446	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPYKRKHQGWLGESGMAPRYLSWVLDHLVGVSKVSKV
Ga0182215_10450052	3300017447	Switchgrass Phyllosphere	MPTGVSLAEQSLSLSSLAVIPCKREHQGRMEESGMAPRYLSWVLNHLVAASKVSKVSQEKGERAYKE
Ga0182215_10473691	3300017447	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPHYWSWVLDHLVAVNKVSKISQVKQ
Ga0182215_11733222	3300017447	Switchgrass Phyllosphere	PTGVSLAEQSLSLSSLAVIPCKKEHQGQLGESGMAPRYLSWDLDHLVAASKVSKVSQEKWERA
Ga0213505_1154902	3300022465	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGWMEESGMAPRYLSWVLDHLVAASKVSKVSQVKQ
Ga0207680_104996232	3300025903	Switchgrass Rhizosphere	VSLAEQSLSLSSLAVIPCKRERQGQLEESGMAPLYLSWDLDHLVAASKVSKVSEEKWERA
Ga0207712_116658911	3300025961	Switchgrass Rhizosphere	MAEQSLSLSSLAVIPCKREHQGRMEESGMAPRYLSWVLDHLVAA
Ga0207703_109095022	3300026035	Switchgrass Rhizosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPRYWSWVLDYFVVVNKVSKVSQVKQ
Ga0207641_119598512	3300026088	Switchgrass Rhizosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPRYWSWVLDHLVAVNKVSKVSQVKQ
Ga0268322_10300232	3300028049	Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPRYWSLVLDHLVAVNKVSKVSQVKQ
Ga0268328_10704551	3300028050	Phyllosphere	VSLAEQSLSLSSLAVIPCKKEQQGQLGESGMTPRYWSWVLDHFVAVN
Ga0268300_10119621	3300028052	Phyllosphere	VSLAEQSLLLSSLAVIPCKKERQEWLEGSRMAPHYWSWVLDHLVAIGKVS
Ga0268338_10035631	3300028055	Phyllosphere	VSLAEQSLSLSSLAVIPCKREHQGRLGESGMAPHYLSWVLDHLVAASKVSKVSQEK
Ga0268330_10502162	3300028056	Phyllosphere	VSLAEQSLSLSSLAVIPCKKEQQGQLGESGMTPRYWSWVLDHFVAVNKVSKVSQVKQ
Ga0268352_10311422	3300028057	Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGGSGMAPRYWSWVLDHLVAASKVSKVSQEKWERA
Ga0268340_10404282	3300028064	Phyllosphere	VSLAEQSLLLSSLAVIPCKREHQGRMEESRMVPRYLSWVLDHLVAASKVSKVSQEFGRGV
Ga0268355_10044552	3300028139	Phyllosphere	RPTGVSLAEQSLSLSSLAVIPCKREHQGRLGESGMAPRYLSWVLGHLVAASKVSKVSQEKWERA
Ga0268303_1051512	3300028147	Phyllosphere	QSLSLSSLVVIPCKREHQGQLGESGMAPRYLSWVLDHLVAASKVSKVSQEKWERA
Ga0268343_10041642	3300028150	Phyllosphere	VSLAEQSLSLSSLAVIPCKREHQGRMEESGMAPRYLSWVLDHLVAASKVSKVSQEKWERA
Ga0268320_10114582	3300028153	Phyllosphere	SLSSLVVIPCKKEHQGRLGESGMAPRYWSWVLDHLVAVNKVSKVSQVKQ
Ga0268312_10138502	3300028248	Phyllosphere	VSLPEQSLSLSSLAVIPCKKEHQRRLGESGMAPHYWSWVLDHLVAVN
Ga0268312_10170431	3300028248	Phyllosphere	TEVSLAEQSLSLSSLAVIPCKREHQGRMEESGMAPRYLSWVLDHLVAASKVSKVSQEKWERA
Ga0268325_1034111	3300028463	Phyllosphere	VIPCKKEHQGQLGESGMAPRYLSWDLDHLVAASKVSKVSQEKWERA
Ga0268302_1023112	3300028464	Phyllosphere	VSLAEQSLSLSSLVVIPCKKEHQGRLGESGMVPRYWSWVLDHLVAVNKVSKVIQVKQ
Ga0268302_1057452	3300028464	Phyllosphere	AEQSLSLSSLVVIPCKREHQGLLGGSGMAPRYLSWVLDHLVAASKVSKVSQEKWERA
Ga0268321_1020843	3300028466	Phyllosphere	VSLAEQSLSLSSLAVIPCKREHQGWLGESGMAPRYLSWVLDHLVAASKVN
Ga0268323_10199431	3300028471	Phyllosphere	VSLAEQSLSLSSLTVIPCKREHQGRLEESGMAFRYFSWVLNHLVTASKVSKVS
Ga0268319_10067073	3300028473	Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPRYWSWVLDHLVAVNKVSKV
Ga0268319_10245331	3300028473	Phyllosphere	RPTGVSLAEQSLSLSSLAVIHCKREHQGLLGGSGMAPRYLSWVLDHLVAASKVSKVSQEK
Ga0268331_10027393	3300028474	Phyllosphere	VRLAEQSLSLSSLAVIPCKREHQGRLGESGMAPHYLSWVLDHLVAASKVSKVSQEKWERA
Ga0268313_10004302	3300028523	Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPRYWSWVLDHFVAVNKVSKVSQVKQ
Ga0268339_10067111	3300028526	Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPRYLSWVLDHLVAASKVSKVSQ
Ga0214484_10692911	3300032591	Switchgrass Phyllosphere	VSLAEQSLSLSSLAVIPCKKEHQGRLGESGMAPRYWSWVLDHLVAVN
Ga0214497_10665771	3300032689	Switchgrass Phyllosphere	TIIIIFSLAVIPCKKEHQGRLGESGMAPHYWSWVLDHLVAVNKVSKVSQVKQ
Ga0214497_11056963	3300032689	Switchgrass Phyllosphere	VSPAKQSLLLSSLAAIPCKKEHQGQLEESEMAPRYWLQVLDHFVAVS
Ga0214494_10492162	3300032699	Switchgrass Phyllosphere	TGVSLAEQSLSLSSLAVIPYKREHQGWLGESGMAPRYWSWVLDHFVAASKVSKVSQEKWERA
Ga0314720_10467401	3300032759	Switchgrass Phyllosphere	GVSLAEQSLSLFSLAVIPCKREHQGRMEESGMAPRYLSWVLDHLVAASKVSRVSQEKWER
Ga0314754_10593911	3300032760	Switchgrass Phyllosphere	SLSLSSLAVIPCKREHQGRMEESGMAPHYLSWVLDHLVAVNKVSKVSQGKL
Ga0314745_10110302	3300032812	Switchgrass Phyllosphere	VSLAEESLSLYSLAVIPCKKEHQGRLGESGMAPRYWSWVLDHLVAVNKVSKVSQVKQ
Ga0314723_11110182	3300032823	Switchgrass Phyllosphere	PTWVSLAEQSLSLSSLAVIPCKKEHQGRFRESGMAPRYWSWVLDHLVAVNKGSKVGQVKQ
Ga0314743_10304101	3300032844	Switchgrass Phyllosphere	VSLAEESLSLYSLAVIPCKKEHQGWLGESGMAPRYWSWVLDHLVAVNKVSKVSQVKQYKA
Ga0314761_10018242	3300033526	Switchgrass Phyllosphere	VSLAEESLSLYSLAVIPCKKEHQGRLGESGMAPRYWSWVLDHLVAVNKVSKVSQVKQYKA

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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