Metagenome Family F085303

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085303
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	119 residues
Representative Sequence	MRRCVLLLAVTALVVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Number of Associated Samples	86
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.68 %
% of genes near scaffold ends (potentially truncated)	28.83 %
% of genes from short scaffolds (< 2000 bps)	69.37 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.414 % of family members)
Environment Ontology (ENVO)	Unclassified (36.937 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.045 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.88% β-sheet: 40.50% Coil/Unstructured: 44.63%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01916	DS	51.35
PF02675	AdoMet_dc	4.50
PF07690	MFS_1	1.80
PF04909	Amidohydro_2	1.80
PF11906	DUF3426	0.90
PF00106	adh_short	0.90
PF05052	MerE	0.90
PF08659	KR	0.90
PF04831	Popeye	0.90
PF14360	PAP2_C	0.90
PF00383	dCMP_cyt_deam_1	0.90
PF14378	PAP2_3	0.90
PF01553	Acyltransferase	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1899	Deoxyhypusine synthase	Translation, ribosomal structure and biogenesis [J]	51.35
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	4.50

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	88.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	88.29 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	88.29 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.80 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	86.49 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	86.49 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	86.49 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Sphingomonas elodea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas elodea	0.90 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100458052	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1476	Open in IMG/M
3300000956\|JGI10216J12902_102628088	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1774	Open in IMG/M
3300000956\|JGI10216J12902_109736293	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300002908\|JGI25382J43887_10189260	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1002	Open in IMG/M
3300004633\|Ga0066395_10004075	All Organisms → cellular organisms → Bacteria	5066	Open in IMG/M
3300004633\|Ga0066395_10103601	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1376	Open in IMG/M
3300005167\|Ga0066672_10044676	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2511	Open in IMG/M
3300005294\|Ga0065705_10708190	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	649	Open in IMG/M
3300005295\|Ga0065707_11149841	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300005332\|Ga0066388_100045620	All Organisms → cellular organisms → Bacteria → Proteobacteria	4412	Open in IMG/M
3300005332\|Ga0066388_100532159	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1807	Open in IMG/M
3300005332\|Ga0066388_101879988	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1068	Open in IMG/M
3300005467\|Ga0070706_100892300	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	821	Open in IMG/M
3300005540\|Ga0066697_10399430	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	798	Open in IMG/M
3300005558\|Ga0066698_10331846	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1052	Open in IMG/M
3300005713\|Ga0066905_100452085	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300005713\|Ga0066905_100555711	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	964	Open in IMG/M
3300005713\|Ga0066905_100637806	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	906	Open in IMG/M
3300005713\|Ga0066905_102295248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas elodea	504	Open in IMG/M
3300005764\|Ga0066903_101081598	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1476	Open in IMG/M
3300005764\|Ga0066903_102973859	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	918	Open in IMG/M
3300005983\|Ga0081540_1098532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1265	Open in IMG/M
3300006049\|Ga0075417_10038466	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2018	Open in IMG/M
3300006845\|Ga0075421_100136531	All Organisms → cellular organisms → Bacteria	3071	Open in IMG/M
3300006845\|Ga0075421_100249927	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2174	Open in IMG/M
3300006847\|Ga0075431_100095914	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3062	Open in IMG/M
3300006880\|Ga0075429_100175727	All Organisms → cellular organisms → Bacteria	1876	Open in IMG/M
3300006903\|Ga0075426_10088621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2215	Open in IMG/M
3300006969\|Ga0075419_11286522	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300007076\|Ga0075435_101308721	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300009012\|Ga0066710_100616386	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1648	Open in IMG/M
3300009137\|Ga0066709_100013497	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7708	Open in IMG/M
3300009147\|Ga0114129_11616176	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	793	Open in IMG/M
3300009156\|Ga0111538_12575382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	638	Open in IMG/M
3300009792\|Ga0126374_10020331	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2893	Open in IMG/M
3300009792\|Ga0126374_10196959	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1271	Open in IMG/M
3300009808\|Ga0105071_1018991	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	971	Open in IMG/M
3300010043\|Ga0126380_10274283	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1183	Open in IMG/M
3300010047\|Ga0126382_10094034	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1915	Open in IMG/M
3300010047\|Ga0126382_10644841	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	879	Open in IMG/M
3300010047\|Ga0126382_10673292	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	863	Open in IMG/M
3300010335\|Ga0134063_10063888	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1627	Open in IMG/M
3300010359\|Ga0126376_10058254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2767	Open in IMG/M
3300010361\|Ga0126378_10599582	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1216	Open in IMG/M
3300010362\|Ga0126377_12994841	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300010362\|Ga0126377_13002260	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300010366\|Ga0126379_10378221	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1457	Open in IMG/M
3300010376\|Ga0126381_102505663	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	739	Open in IMG/M
3300010398\|Ga0126383_10045725	All Organisms → cellular organisms → Bacteria	3609	Open in IMG/M
3300010398\|Ga0126383_10113111	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2455	Open in IMG/M
3300012202\|Ga0137363_10717833	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	846	Open in IMG/M
3300012685\|Ga0137397_10506939	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	899	Open in IMG/M
3300012929\|Ga0137404_10031455	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3929	Open in IMG/M
3300012930\|Ga0137407_10281270	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1516	Open in IMG/M
3300012948\|Ga0126375_10244272	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1211	Open in IMG/M
3300015052\|Ga0137411_1097974	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	762	Open in IMG/M
3300015245\|Ga0137409_10527278	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1006	Open in IMG/M
3300015374\|Ga0132255_100040866	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5964	Open in IMG/M
3300015374\|Ga0132255_104359282	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	600	Open in IMG/M
3300016319\|Ga0182033_10518869	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1026	Open in IMG/M
3300016371\|Ga0182034_10293539	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1300	Open in IMG/M
3300017966\|Ga0187776_10003122	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	8476	Open in IMG/M
3300018029\|Ga0187787_10004975	All Organisms → cellular organisms → Bacteria	3115	Open in IMG/M
3300018064\|Ga0187773_10023244	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2678	Open in IMG/M
3300018433\|Ga0066667_11557753	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	586	Open in IMG/M
3300018468\|Ga0066662_10091611	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2119	Open in IMG/M
3300026313\|Ga0209761_1343018	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	507	Open in IMG/M
3300026332\|Ga0209803_1004972	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	7649	Open in IMG/M
3300026335\|Ga0209804_1256763	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	641	Open in IMG/M
3300027032\|Ga0209877_1002471	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1422	Open in IMG/M
3300027187\|Ga0209869_1015232	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	852	Open in IMG/M
3300027273\|Ga0209886_1003311	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2187	Open in IMG/M
3300027527\|Ga0209684_1008226	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1691	Open in IMG/M
3300027646\|Ga0209466_1002136	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4037	Open in IMG/M
3300027873\|Ga0209814_10021461	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2621	Open in IMG/M
3300027873\|Ga0209814_10024855	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2447	Open in IMG/M
3300027874\|Ga0209465_10013919	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3625	Open in IMG/M
3300027874\|Ga0209465_10394759	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	692	Open in IMG/M
3300027907\|Ga0207428_10000190	All Organisms → cellular organisms → Bacteria	85215	Open in IMG/M
3300027909\|Ga0209382_10000892	All Organisms → cellular organisms → Bacteria	48208	Open in IMG/M
3300027909\|Ga0209382_10108519	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3247	Open in IMG/M
3300027909\|Ga0209382_10146916	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2733	Open in IMG/M
3300027949\|Ga0209860_1039803	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	625	Open in IMG/M
3300031538\|Ga0310888_10026156	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2517	Open in IMG/M
3300031543\|Ga0318516_10019216	All Organisms → cellular organisms → Bacteria	3464	Open in IMG/M
3300031562\|Ga0310886_10003686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5035	Open in IMG/M
3300031640\|Ga0318555_10534414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300031679\|Ga0318561_10289608	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	895	Open in IMG/M
3300031720\|Ga0307469_10111241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1954	Open in IMG/M
3300031720\|Ga0307469_10155241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1720	Open in IMG/M
3300031720\|Ga0307469_11561337	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	633	Open in IMG/M
3300031740\|Ga0307468_100295412	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1172	Open in IMG/M
3300031740\|Ga0307468_100343910	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1108	Open in IMG/M
3300031740\|Ga0307468_100619367	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	888	Open in IMG/M
3300031820\|Ga0307473_10002512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5298	Open in IMG/M
3300031820\|Ga0307473_10624466	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	747	Open in IMG/M
3300031831\|Ga0318564_10108254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1235	Open in IMG/M
3300031833\|Ga0310917_10669366	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	704	Open in IMG/M
3300031846\|Ga0318512_10221501	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	929	Open in IMG/M
3300031858\|Ga0310892_11299163	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300031940\|Ga0310901_10337709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	642	Open in IMG/M
3300031941\|Ga0310912_10312137	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1218	Open in IMG/M
3300031943\|Ga0310885_10147945	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1120	Open in IMG/M
3300032000\|Ga0310903_10020718	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2221	Open in IMG/M
3300032052\|Ga0318506_10225151	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	829	Open in IMG/M
3300032055\|Ga0318575_10145549	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1175	Open in IMG/M
3300032059\|Ga0318533_10368486	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1047	Open in IMG/M
3300032174\|Ga0307470_10191194	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1298	Open in IMG/M
3300032174\|Ga0307470_11042813	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	654	Open in IMG/M
3300032180\|Ga0307471_102384257	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	668	Open in IMG/M
3300034115\|Ga0364945_0121081	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	775	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.88%
Host-Associated	Host-Associated	17.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.88%
Plants	Host-Associated → Plants	17.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.70%
Floodplain	Environmental → Terrestrial → Floodplain	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.46%
Loam	Environmental → Terrestrial → Soil → Loam	15.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.41%
Sand	Environmental → Terrestrial → Soil → Sand	4.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.41%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.90%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.51%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.41%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300027032	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 (SPAdes)	Environmental	Open in IMG/M
3300027187	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1004580522	3300000559	Soil	MRRSTLLVAVTILVVAAIAEAQAPGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRIRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPAIGEDQIYQLTVISFDLISEQTP*
JGI10216J12902_1026280882	3300000956	Soil	MRRGTLLVAVTIFVVAAIAEAQAPGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRIRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVTFDLISEQTP*
JGI10216J12902_1097362931	3300000956	Soil	MRRCALLLAATALIVVAASAEAQAPRPTSESFRIQWERRPPSMRPGVDGYIHNDSRWRVTNIRVRAVVVDAAGTPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVSFDLISEQNP*
JGI25382J43887_101892602	3300002908	Grasslands Soil	MRRRALLASMAILVVAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQTP*
Ga0066395_100040752	3300004633	Tropical Forest Soil	MWRRAPLLAAMTLLVATASAAAQSPRPTSESFRIEWVRRPPSMRPGVDGYIFNESRWRVTNLRVRAVVVDAAGIPLRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVSFDLISEQNP*
Ga0066395_101036012	3300004633	Tropical Forest Soil	MRRWALLFAVTALVVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0066672_100446763	3300005167	Soil	MRRRALLAAMAILVVAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQTP*
Ga0065705_107081902	3300005294	Switchgrass Rhizosphere	MRRSTLLVAVTILVVAAIAEAQAPGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRIRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0065707_111498411	3300005295	Switchgrass Rhizosphere	EAQAPGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRIRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0066388_1000456206	3300005332	Tropical Forest Soil	MRRCALLLAVTALVVVAASARAQAPRPTAESFRIEWARRPPSMRPGVDGYIYNESRWRVTNVRVRAVVVDAAGIPVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVSFDLISEQTP*
Ga0066388_1005321592	3300005332	Tropical Forest Soil	MWRRAPLLAAMTLLVATASAAAQSPRPTSESFRIEWVRRPPSMRPGVDGYIFNESRWRVTNLRVRAVVVDAAGIPVRESIVSVWGNAVPGARTFFVLPSIGEGEIYQLTVVSFDLISEQNP*
Ga0066388_1018799881	3300005332	Tropical Forest Soil	PRPTSESFRIEWTRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGTPVRESVVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVISFDLISEQTP*
Ga0070706_1008923002	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LAMRRRALLASMAILVVAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQTP*
Ga0066697_103994301	3300005540	Soil	MRRRALLAAMAILVVAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQ
Ga0066698_103318461	3300005558	Soil	EAVRSLLEPLAMRRRALLAAMAILVVAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQTP*
Ga0066905_1004520852	3300005713	Tropical Forest Soil	MRRCALLLAVTALVVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIYNESRWRVTNVRVRAVVVDAAGNRVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0066905_1005557112	3300005713	Tropical Forest Soil	MRRRALLLAATMLLVAAASAEAQAPRPTSESFRIEWARRPPSMRPGVDGYINNDSRWRVTNIRVRAVVVDAAGIAVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVSFDLISEQNP*
Ga0066905_1006378062	3300005713	Tropical Forest Soil	MRRCTLLLAMTALIVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIHNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEVYQLTVVTFDLISEQNP*
Ga0066905_1022952481	3300005713	Tropical Forest Soil	MRRCALLLAVTALVVVAASAQAQSPRPTSESFRIEWARRPPSMRPGVDGYIYNESRWRVTNIRVRAVVIDAAGNPVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0066903_1010815982	3300005764	Tropical Forest Soil	MPRCVLLLAVTALVVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0066903_1029738592	3300005764	Tropical Forest Soil	MWRRAPLLAAMTLLAATASAAAQSPRPTSESFRIEWARRPPSMRPGVDGYIFNESRWRVTNLRVRAVVVDAAGIPLRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVSFDLISEQNP*
Ga0081540_10985322	3300005983	Tabebuia Heterophylla Rhizosphere	MRRSALLAAMTLLVVVATAQAQGTPRPTAESFRIEWVRRPPSMRPGVDGYIYNESRWRATNLRVRAVVVDAGGNKVRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVITFDLISEQTP*
Ga0075417_100384663	3300006049	Populus Rhizosphere	MRRSALLIAMTVLVVVATAQAQGIGRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNLRVRAVVVDAGGNKVRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVITFDLISEQGP*
Ga0075421_1001365311	3300006845	Populus Rhizosphere	LLIAMTVLVVVATAQAQGIGRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNLRVRAVVVDAGGNKVRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVITFDLISEQGP*
Ga0075421_1002499273	3300006845	Populus Rhizosphere	MRRSALLVAVTILVVAAIAEAQAPGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRIRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0075431_1000959143	3300006847	Populus Rhizosphere	MRRSVLLIAMTVLVVVATAQAQGIGRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNLRVRAVVVDAGGNKVRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVITFDLISEQGP*
Ga0075429_1001757272	3300006880	Populus Rhizosphere	MRRSALLVAVTILVVAAIAEAQAPGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNMRIRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0075426_100886212	3300006903	Populus Rhizosphere	MRRRALLVAMAILVLAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNLRVRAVVVDAGGNKVRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVITFDLISEQGP*
Ga0075419_112865222	3300006969	Populus Rhizosphere	MQRRALLVALAIVLVAATAQAQGARPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRIRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVTFDLISEQTP
Ga0075435_1013087212	3300007076	Populus Rhizosphere	MRRCALLLAATALIVVAASAEAKAPRPTSESFRIQWERRPPSMRPGVDGYIHNDSRWRVTNIRVRAVVVDAAGTPVRESVVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVSFDLISEQNP*
Ga0066710_1006163864	3300009012	Grasslands Soil	LVVAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQTP
Ga0066709_1000134973	3300009137	Grasslands Soil	MAILVVAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQTP*
Ga0114129_116161762	3300009147	Populus Rhizosphere	MRRSTLLVAVTILVVAAIAEAQAPGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRIRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVTFDLISEQGP*
Ga0111538_125753822	3300009156	Populus Rhizosphere	MRRRALLVAVAIVLVAATAQAQGPRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGTPVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVTSFDLISEQGP
Ga0126374_100203314	3300009792	Tropical Forest Soil	MWRRAPLLAAMTLLAATASAAAQSPRPTSESFRIEWARRPPSMRPGVDGYIFNESRWRVTNLRVRAVVVDAAGIPVRESIVSVWGNAVPGARTFFVLPSIGEGEIYQLTVVSFDLISEQNP*
Ga0126374_101969591	3300009792	Tropical Forest Soil	MRRCVLLLAVTALVVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0105071_10189912	3300009808	Groundwater Sand	MRRAALLLAVTALLFGASAYAQGLPRPSPESFRIEWSRRPAWMRPGVDGYLHNESRWRVTNIRVRAQVVDGSGTAIRESAVSVFGNAVPGTRTFFTLPPIADGESYRLTVVSFDLVSQEPPSQEGP*
Ga0126380_102742832	3300010043	Tropical Forest Soil	MRRRALLLAATMLLVAAASAEAQAPRPTSESFRIEWARRPPSMRPGVDGYIHNDSRWRVTNIRVRAVVVDAAGIAVRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVSFDLISEQNP*
Ga0126382_100940344	3300010047	Tropical Forest Soil	MRRRALLLAATILLGAAASAEAQAPRPTAESFRIEWARRPPSMRPGVDGYIHNDSRWRVTNIRVRAVVVDAAGIPVRESVVSVWGNAVPGTRTFFVLPSIAEGEIYQLTVVSFDLISEQNP*
Ga0126382_106448412	3300010047	Tropical Forest Soil	MRRRALLLAATILLGAAASAEAQAPRPTAESFRIEWARRPPSMRPGVDGYIHNDSRWRVTNIRVRAVVVDAAGIAVRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVSFDLISEQNP*
Ga0126382_106732922	3300010047	Tropical Forest Soil	MWRRAPLLAAMTLLVATASAAAQSPRPTSESFRIEWVRRPTSMRPGVDGYIFNESRWRVTNLRVRAVVVDAAGIPLRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVSFDLISEQNP*
Ga0134063_100638883	3300010335	Grasslands Soil	MRRRALLVVMAILVVVATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQTP*
Ga0126376_100582543	3300010359	Tropical Forest Soil	MWRRAPLLAAMTLLVATASAAAQSPRPTSESFRIEWARRPPSMRPGVDGYIFNESRWRVTNLRVRAVVVDAAGIPVRESIVSVWGNAVPGARTFFVLPSIGEGEIYQLTVVSFDLISEQNP*
Ga0126378_105995822	3300010361	Tropical Forest Soil	MRRCVLLLALTALVVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIYNESRWRVTNVRVRAVVVDAAGIPVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVSFDLISEQTP*
Ga0126377_129948412	3300010362	Tropical Forest Soil	MRRCVLLLAATALIVAAASAEAQAPRPTSESFRIEWARRPPSMRPGVDGYIYNESRWRVTNLRVRAVVVDAAGTPVRESVVSVWGNAVPGTRTFFGLPSIGEGEIYQLTVVSFDLISEQNP*
Ga0126377_130022601	3300010362	Tropical Forest Soil	AVMRRCVLLLALTALVVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0126379_103782212	3300010366	Tropical Forest Soil	MRRCVLLLALTALVVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0126381_1025056632	3300010376	Tropical Forest Soil	MRRCVLLLALTALVVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0126383_100457255	3300010398	Tropical Forest Soil	MRRCVLLLALTALVVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESLVSVGGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0126383_101131113	3300010398	Tropical Forest Soil	MWRRAPLLAAMTLLVATASAAAQSPRPTSESFRIEWARRPPSMRPGVDGYIFNESRWRVTNLRVRAVVVDAAGIPLRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVSFDLISEQNP*
Ga0137363_107178331	3300012202	Vadose Zone Soil	ALLAAMAILVVAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGAAVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQTP*
Ga0137397_105069392	3300012685	Vadose Zone Soil	MRRRALLIAAAALVVAAASGQAQPPGRPTAESFRIEWVRRPPSMRPGVDGYIHNDSRWRVTNLRIRAVVVDAAGTVVRESVVSVWGNSVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0137404_100314551	3300012929	Vadose Zone Soil	LVVAAASAQAQPLGRPTAESFRIEWVRRPPSMRPGVDGYIHNDSRWRVTNLRIRAVVVDAAGTVVRESVVSVWGNSVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0137407_102812702	3300012930	Vadose Zone Soil	MRRRALLIAAAALVVAAASAQAQPPGRPTAESFRIEWVRRPPSMRPGVDGYIHNDSRWRVTNLRIRAVVVDAAGTVVRESVVSVWGNSVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0126375_102442722	3300012948	Tropical Forest Soil	MRRCSLLLAVTALVVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIHNESRWRVTNIRVRAVVVDAAGHPVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0137411_10979741	3300015052	Vadose Zone Soil	ASAQAQPPGRPTAESFRIEWVRRPPSMRPGVDGYIHNDSRWRVTNLRIRAVVVDAAGTVVRESVVSVWGNSVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0137409_105272782	3300015245	Vadose Zone Soil	MRRRALLIAAAAFVVAAVSAQAQPPGRPTAESFRIEWVRRPPSMRPGVDGYIHNDSRWRVTNLRIRAVVVDAAGTVVRESVVSVWGNSVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP*
Ga0132255_1000408668	3300015374	Arabidopsis Rhizosphere	MRRRALLVAVAIVLVAATAQAQGPRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESTVSVWGNAVPGTRTFFVLPSIAEGEIYQLTVTSFDLISEQGP
Ga0132255_1043592822	3300015374	Arabidopsis Rhizosphere	MRPGVLLIAVVALVAAAAVAQAQGPGRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNLRVRAVVVDAAGAVVRESVVSVWGNAVPGTRTFFVLPALGEGQIYQLTVISF
Ga0182033_105188691	3300016319	Soil	MRRCVLLLAVTALVVVAASAQAQSPRPTAESFRIEWTRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEICQLTVVTFDLI
Ga0182034_102935392	3300016371	Soil	MRRCVLLLAVTALVVVAASAQAQSPRPTAESFRIEWTRRPPSMHPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQT
Ga0187776_1000312213	3300017966	Tropical Peatland	MRLGALVIAVTALVVVAAVAQAQEPGRPAPGSFRFEWARRSPSMRPGVDGYVYNDSNWRVTNLRVRAVVVDAAGATVRESVVSVWGNAVPGTRTFFVLPALGEGEIYQLTVVSFDLVSEQTP
Ga0187787_100049752	3300018029	Tropical Peatland	MRLGALVIAVTALVVVAAVAQAQEPGRPAPGSFRFEWARRSPSMRPGVDGYVYNDSNWRVTNLRVRAVVVDAAGATVRESVVSVWGNAVPGTRTFFVLPALREGEIYQLTVVSFDLVSEQTP
Ga0187773_100232444	3300018064	Tropical Peatland	MRLGALVIAVTALVVVAAVAQAQEPGRPAPGSFRFEWARRSPSMRPGVDGYVYNDSNWRVTNLRVRAVVVDAAGATVRESVVSVWGNAVPGTRTFFVLPALREG
Ga0066667_115577532	3300018433	Grasslands Soil	MRRRALLAAMAILVVAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNDSRWRVTNIRVRAVVVDTTGATVRESIVSVGGNAVPETATSFGRPQIGRSRV
Ga0066662_100916112	3300018468	Grasslands Soil	MRRRALLAAMAILVVAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQT
Ga0209761_13430181	3300026313	Grasslands Soil	LLVAMAILVLAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQTP
Ga0209803_10049724	3300026332	Soil	MRRRALLASMAILVVAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQT
Ga0209804_12567631	3300026335	Soil	AILVVAATAQAQGTGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGATVRESIVSVWGNAVPGTRTFFVLPSIGEGEVYQLTVTTFDLISEQTP
Ga0209877_10024712	3300027032	Groundwater Sand	MRRRVLLLVMTMLVVTSAHAQGPGRPAPESFRIEWTRRPAWMRPGVDGYLYNDSRWRVTNIRVRAQVVDAAGATVRESVVSVFGNSVPGARTFFVLPPIAEGHSYELTVVSFDLVSQEGP
Ga0209869_10152322	3300027187	Groundwater Sand	SAHAQGPGRPAPESFRIEWTRRPAWMRPGVDGYLYNDSRWRVTNIRVRAQVVDAAGATVRESVVSVFGNSVPGARTFFVLPPIAEGHSYELTVVSFDLVSQEGP
Ga0209886_10033113	3300027273	Groundwater Sand	MRRAALLLAVTALLFGASAYAQGLPRPSPESFRIEWSRRPAWMRPGVDGYLHNESRWRVTNIRVRAQVVDGSGTAIRESAVSVFGNAVPGTRTFFTLPPIADGESYRLTVVSFDLVSQEPPSQEGP
Ga0209684_10082262	3300027527	Tropical Forest Soil	MRRCALLLAVTVLVVVAASARAQSPRPTAESFRFEWSRRPPSMRPGVDGYIYNESRWRVTNVRVRAVVVDAAGIPVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVSFDLISEQT
Ga0209466_10021364	3300027646	Tropical Forest Soil	MRRRALLLAATILLGAAASAEAQAPRPTAESFRIEWARRPPSMRPGVDGYIHNDSRWRVTNIRVRAVVVDAAGIAVRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVSFDLISEQN
Ga0209814_100214613	3300027873	Populus Rhizosphere	MQWRALLVAVAIVLVAATAQAQGSRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGTPVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVTSFDLISEQGP
Ga0209814_100248553	3300027873	Populus Rhizosphere	MRRSALLIAMTVLVVVATAQAQGIGRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNLRVRAVVVDAGGNKVRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVITFDLISEQG
Ga0209465_100139194	3300027874	Tropical Forest Soil	MWRRAPLLAAMTLLVATASAAAQSPRPTSESFRIEWVRRPPSMRPGVDGYIFNESRWRVTNLRVRAVVVDAAGIPLRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVSFDLISEQN
Ga0209465_103947591	3300027874	Tropical Forest Soil	AVTALVVVAASAQAQSPRPTAESFRIEWARRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESLVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0207428_1000019044	3300027907	Populus Rhizosphere	MQRRALLVALAIVLVAATAQAQGSRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGTPVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVTSFDLISEQGP
Ga0209382_100008928	3300027909	Populus Rhizosphere	MQWRALLVAVAIVLVAATAQAQGPRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGTPVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVTSFDLISEQGP
Ga0209382_101085193	3300027909	Populus Rhizosphere	MRRSALLVAVTILVVAAIAEAQAPGRPTPESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRIRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVVTFDLISEQT
Ga0209382_101469165	3300027909	Populus Rhizosphere	MRRSVLLIAMTVLVVVATAQAQGIGRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNLRVRAVVVDAGGNKVRESIVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVITFDLISEQG
Ga0209860_10398031	3300027949	Groundwater Sand	MRRRVLLLVMTMLVVTSAHAQGPGRPAPESFRIEWTRRPAWMRPGVDGYLYNDSRWRVTNIRVRAQVVDAAGATVRESVVSVFGNSVPGARTFFVLPPIAEG
Ga0310888_100261563	3300031538	Soil	MRRRALLVAVAIVLVAATAQAQGPRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVTSFDLISEQGP
Ga0318516_100192163	3300031543	Soil	MRRCVLLLAVTALVVVAASAQAQSPRPTAESFRIEWTRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQT
Ga0310886_100036867	3300031562	Soil	MRRRALLVAVAIVLVAATTQAQGPRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVTSFDLISEQGP
Ga0318555_105344142	3300031640	Soil	PKCSRAVMRRCVLLLAVTALVVVAASAQAQSPRPTAESFRIEWTRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0318561_102896081	3300031679	Soil	MRRCVLLLAVTALVVVAASAQAQSPRPTAESFRIEWTRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIG
Ga0307469_101112414	3300031720	Hardwood Forest Soil	MRRRALLIAAAALVVAAASAQAQPPGRPTAESFRIEWVRRPPSMRPGVDGYIHNDSRWRVTNLRIRAVVVDAAGTVVRESVVSVWGNSVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0307469_101552413	3300031720	Hardwood Forest Soil	MRRRALLIAVAALVAAAAIAQAQSSGRPTAESFRIEWVRRPPSMRPGVDGYIHNDSRWRVTNLRIRAVVVDAAGAVVRESVVSVWGNSVPGTRTFFTLPSIGEGEIYQLTVVTFDLISE
Ga0307469_115613372	3300031720	Hardwood Forest Soil	MRPGVLLIVVVALVAAAAVAEAQGPGRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNLRVRAVVVDDAGTVVRESVVSVWGNAVPGTRTFFVLPAIGEGQIYQLTVISFDLISEQTP
Ga0307468_1002954122	3300031740	Hardwood Forest Soil	MRHSVLLIAVVVVLVAAAAVAEAQGPGRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNLRVRAVVVDDAGTVVRESVVSVWGNAVPGTRTFFVLPAIGEGQIYQLTVISFDLISEQTP
Ga0307468_1003439102	3300031740	Hardwood Forest Soil	MRRRALLIAAAAFVVAGASAQAQPPGRPTAESFRIEWVRRPPSMRPGVDGYIHNDSRWRVTNLRIRAVVVDAAGTVVRESVVSVWGNSVPGTRTFFTLPSIAEGEIYQLTVVTFDLISEQTP
Ga0307468_1006193672	3300031740	Hardwood Forest Soil	MRRRALLIAAAALVVAAASAQAQPPGRPTAESFRIEWVRRPPSMRPGVDGYIHNDSRWRVTNLRIRAVVVDAAGAVVRESVVSVWGNSVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0307473_100025125	3300031820	Hardwood Forest Soil	MRRCALLLAATALIVVAASAEAQAPRPTSESFRIQWERRPPSMRPGVDGYIHNDSRWRVTNIRVRAVVVDAAGTPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVSFDLISEQN
Ga0307473_106244662	3300031820	Hardwood Forest Soil	MRRRALLIAAAAFVVAAASAQAQPPGRPTAESFRIEWVRRPPSMRPGVDGYIHNDSRWRVTNLRIRAVVVDAAGTVVRESVVSVWGNSVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0318564_101082541	3300031831	Soil	SRAVMRRCVLLLAVTALVVVAASAQAQSPRPTAESFRIEWTRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0310917_106693661	3300031833	Soil	QAQSPRPTAESFRIEWTRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0318512_102215012	3300031846	Soil	LLAVTALVVVAASAQAQSPRPTAESFRIEWTRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0310892_112991631	3300031858	Soil	MRPGVLLLAVVALAAAAAVAQAQGPGRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNLRVRAVVVDAAGAVVRESVVSVWGNAVPGTRTFFVLPALGEGQIYQLTVISFDLISEQTP
Ga0310901_103377092	3300031940	Soil	VLLIAVVALVAAAAVAQAQGPGRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNLRVRAVVVDAAGAVVRESVVSVWGNAVPGTRTFFVLPALGEGQIYQLTVISFDLISEQTP
Ga0310912_103121371	3300031941	Soil	VTALVVVAASAQAQSPRPTAESFRIEWTRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0310885_101479452	3300031943	Soil	MQWRALLVAVAIVLVAATAQAQGPRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVTSFDLISEQGP
Ga0310903_100207183	3300032000	Soil	MQWRALLVAVAIVLVAATTQAQGPRPTSESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIGEGEIYQLTVTSFDLISEQGP
Ga0318506_102251511	3300032052	Soil	VLLLAVTALVVVAASAQAQSPRPTAESFRIEWTRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0318575_101455491	3300032055	Soil	VAASAQAQSPRPTAESFRIEWTRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0318533_103684861	3300032059	Soil	CPKCSRAVMRRCVLLLAVTALVVVAASAQAQSPRPTAESFRIEWTRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGNPVRESVVSVWGNAVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0307470_101911942	3300032174	Hardwood Forest Soil	MRPGVLLIAVVALVAAAAVAQAQGPGRPTSESFRIEWVPRPPSMRPGVDGYIHNDSRWRVTNIRVRAVVVDAAGTVVRESVVSVWGNAVPGTRTFFVLPALGEGQIYQLTVISFDLISEQTP
Ga0307470_110428131	3300032174	Hardwood Forest Soil	MRRRALLIAAAALVVAGASAQAQPPGRPTAESFRIEWVRRPPSMRPGVDGYIYNESRWRVTNIRVRAVVVDAAGTTVRESTVSVWGNAVPGTRTFFVLPSIAEGEIYQLTVTSFDLISEQGP
Ga0307471_1023842572	3300032180	Hardwood Forest Soil	MRRRALLIAVAALVAAAAIAQAQSSGRPTAESFRIEWVRRPPSMRPGVDGYIHNDSRWRVTNLRIRAVVVDAAGAVVRESVVSVWGNSVPGTRTFFTLPSIGEGEIYQLTVVTFDLISEQTP
Ga0364945_0121081_344_709	3300034115	Sediment	MWRRALLIAAAALVVATSVRAQGPGRPTAESFRIEWTQRPPSMRPGVDAYLYNDSRWRVTNIRVRAVVVDAAGATVRESLVSVWGNAVPGARTFFSLPSIREGEIYQLTVASFDLISEQT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085303

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences