Metagenome / Metatranscriptome Family F085373

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085373
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	111 residues
Representative Sequence	IFIQSERETRLAIGGATNGWKRVDYTVVLQIFHHSLQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Number of Associated Samples	95
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.80 %
% of genes near scaffold ends (potentially truncated)	95.50 %
% of genes from short scaffolds (< 2000 bps)	79.28 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.468 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (39.640 % of family members)
Environment Ontology (ENVO)	Unclassified (82.883 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (82.883 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.11% β-sheet: 35.25% Coil/Unstructured: 49.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF05709	Sipho_tail	3.60
PF04883	HK97-gp10_like	2.70
PF04860	Phage_portal	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG4722	Phage-related protein YomH	Mobilome: prophages, transposons [X]	3.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
All Organisms	root	All Organisms	31.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
cellular organisms	root	All Organisms → cellular organisms	27.03 %
Viruses	superkingdom	All Organisms → Viruses	4.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.23 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.23 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.23 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.90 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	5.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.90 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.90 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	0.90 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000162\|TB03JUN2009H_c008183	Not Available	1593	Open in IMG/M
3300000162\|TB03JUN2009H_c019218	Not Available	787	Open in IMG/M
3300000176\|TB03JUN2009E_c001609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5660	Open in IMG/M
3300000176\|TB03JUN2009E_c053645	Not Available	519	Open in IMG/M
3300000203\|TB18AUG2009E_c029435	Not Available	573	Open in IMG/M
3300002307\|JGI24890J29729_1066212	Not Available	605	Open in IMG/M
3300003375\|JGI26470J50227_1011149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2226	Open in IMG/M
3300003783\|Ga0007850_1006678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	984	Open in IMG/M
3300003787\|Ga0007811_1019190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	596	Open in IMG/M
3300003796\|Ga0007865_1021843	Not Available	593	Open in IMG/M
3300003798\|Ga0007842_1013341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	529	Open in IMG/M
3300003804\|Ga0007817_1002288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1542	Open in IMG/M
3300003804\|Ga0007817_1015675	Not Available	504	Open in IMG/M
3300003815\|Ga0007856_1006781	Not Available	813	Open in IMG/M
3300004054\|Ga0063232_10023874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1475	Open in IMG/M
3300004692\|Ga0065171_1061204	Not Available	598	Open in IMG/M
3300004770\|Ga0007804_1113142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	688	Open in IMG/M
3300004777\|Ga0007827_10011324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2257	Open in IMG/M
3300005528\|Ga0068872_10245093	Not Available	1008	Open in IMG/M
3300006071\|Ga0007876_1140961	Not Available	606	Open in IMG/M
3300006101\|Ga0007810_1021294	All Organisms → Viruses → Predicted Viral	1489	Open in IMG/M
3300006101\|Ga0007810_1114148	Not Available	513	Open in IMG/M
3300006104\|Ga0007882_10290694	Not Available	529	Open in IMG/M
3300006105\|Ga0007819_1092603	Not Available	605	Open in IMG/M
3300006108\|Ga0007862_1009678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2271	Open in IMG/M
3300006108\|Ga0007862_1070279	Not Available	686	Open in IMG/M
3300006110\|Ga0007871_1066675	Not Available	677	Open in IMG/M
3300006121\|Ga0007824_1058088	Not Available	738	Open in IMG/M
3300006126\|Ga0007855_1030712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1182	Open in IMG/M
3300006802\|Ga0070749_10426458	Not Available	729	Open in IMG/M
3300008110\|Ga0114343_1089882	Not Available	1085	Open in IMG/M
3300008116\|Ga0114350_1018194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2960	Open in IMG/M
3300008266\|Ga0114363_1081656	Not Available	1204	Open in IMG/M
3300008266\|Ga0114363_1149250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	777	Open in IMG/M
3300009158\|Ga0114977_10327192	Not Available	868	Open in IMG/M
3300009158\|Ga0114977_10487763	Not Available	676	Open in IMG/M
3300009159\|Ga0114978_10357417	Not Available	882	Open in IMG/M
3300009164\|Ga0114975_10065612	All Organisms → Viruses → Predicted Viral	2121	Open in IMG/M
3300009169\|Ga0105097_10071234	Not Available	1886	Open in IMG/M
3300010157\|Ga0114964_10029121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3057	Open in IMG/M
3300012665\|Ga0157210_1050952	Not Available	632	Open in IMG/M
3300013093\|Ga0164296_1020576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	4134	Open in IMG/M
3300013094\|Ga0164297_10009402	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7474	Open in IMG/M
3300013285\|Ga0136642_1015399	Not Available	2292	Open in IMG/M
3300013285\|Ga0136642_1035623	Not Available	1400	Open in IMG/M
3300013295\|Ga0170791_14336031	Not Available	775	Open in IMG/M
3300017722\|Ga0181347_1001039	Not Available	9257	Open in IMG/M
3300017777\|Ga0181357_1033465	Not Available	2025	Open in IMG/M
3300019784\|Ga0181359_1090458	Not Available	1135	Open in IMG/M
3300020159\|Ga0211734_10152928	Not Available	802	Open in IMG/M
3300020681\|Ga0214253_106787	Not Available	1108	Open in IMG/M
3300020697\|Ga0214230_126505	Not Available	637	Open in IMG/M
3300020704\|Ga0214250_1026592	Not Available	717	Open in IMG/M
3300020710\|Ga0214198_1025647	Not Available	726	Open in IMG/M
3300020716\|Ga0214207_1035569	Not Available	562	Open in IMG/M
3300020719\|Ga0214257_1038457	Not Available	580	Open in IMG/M
3300020726\|Ga0214220_1011017	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300021121\|Ga0214173_129589	Not Available	515	Open in IMG/M
3300021123\|Ga0214212_1015484	Not Available	675	Open in IMG/M
3300021130\|Ga0214180_1011387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1024	Open in IMG/M
3300021130\|Ga0214180_1024628	Not Available	635	Open in IMG/M
3300021134\|Ga0214171_1017885	Not Available	1057	Open in IMG/M
3300021137\|Ga0214165_1104142	Not Available	540	Open in IMG/M
3300021142\|Ga0214192_1183537	Not Available	512	Open in IMG/M
3300022407\|Ga0181351_1155744	Not Available	816	Open in IMG/M
3300024346\|Ga0244775_11076063	Not Available	632	Open in IMG/M
3300024859\|Ga0255278_1104326	Not Available	547	Open in IMG/M
3300025353\|Ga0208255_121200	Not Available	575	Open in IMG/M
3300025357\|Ga0208383_1013396	Not Available	1014	Open in IMG/M
3300025357\|Ga0208383_1029119	Not Available	638	Open in IMG/M
3300025381\|Ga0208871_1030491	Not Available	770	Open in IMG/M
3300025383\|Ga0208250_1000545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10686	Open in IMG/M
3300025387\|Ga0207959_1022218	Not Available	1047	Open in IMG/M
3300025392\|Ga0208380_1000301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13835	Open in IMG/M
3300025392\|Ga0208380_1027582	Not Available	903	Open in IMG/M
3300025398\|Ga0208251_1003771	Not Available	3438	Open in IMG/M
3300025398\|Ga0208251_1010866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1826	Open in IMG/M
3300025402\|Ga0208876_1015424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1334	Open in IMG/M
3300025411\|Ga0208865_1000051	Not Available	38735	Open in IMG/M
3300025418\|Ga0208253_1002816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5237	Open in IMG/M
3300025418\|Ga0208253_1018526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1431	Open in IMG/M
3300025426\|Ga0208739_1010051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1829	Open in IMG/M
3300025428\|Ga0208506_1059052	Not Available	653	Open in IMG/M
3300025430\|Ga0208622_1023313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1258	Open in IMG/M
3300025430\|Ga0208622_1032263	Not Available	1012	Open in IMG/M
3300025466\|Ga0208497_1003521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5071	Open in IMG/M
3300025470\|Ga0208389_1000149	Not Available	38136	Open in IMG/M
3300025723\|Ga0208741_10009899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2604	Open in IMG/M
3300025773\|Ga0208104_1020283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	833	Open in IMG/M
3300025781\|Ga0208386_1030576	Not Available	776	Open in IMG/M
3300025783\|Ga0208258_1045801	Not Available	617	Open in IMG/M
3300026569\|Ga0255277_1040255	Not Available	1225	Open in IMG/M
3300027749\|Ga0209084_1381764	Not Available	508	Open in IMG/M
3300027759\|Ga0209296_1313585	Not Available	618	Open in IMG/M
3300027805\|Ga0209229_10272751	Not Available	750	Open in IMG/M
3300031759\|Ga0316219_1018091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3505	Open in IMG/M
3300031857\|Ga0315909_10886186	Not Available	552	Open in IMG/M
3300031951\|Ga0315904_10641523	Not Available	905	Open in IMG/M
3300031963\|Ga0315901_11008003	Not Available	581	Open in IMG/M
3300032050\|Ga0315906_10173804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2056	Open in IMG/M
3300032050\|Ga0315906_10705041	Not Available	809	Open in IMG/M
3300032093\|Ga0315902_10953888	Not Available	651	Open in IMG/M
3300032116\|Ga0315903_10141604	All Organisms → Viruses → Predicted Viral	2223	Open in IMG/M
3300032116\|Ga0315903_10670700	Not Available	781	Open in IMG/M
3300032561\|Ga0316222_1159003	Not Available	834	Open in IMG/M
3300033816\|Ga0334980_0341208	Not Available	575	Open in IMG/M
3300034082\|Ga0335020_0540470	Not Available	550	Open in IMG/M
3300034092\|Ga0335010_0418974	Not Available	727	Open in IMG/M
3300034102\|Ga0335029_0243564	All Organisms → Viruses → Predicted Viral	1167	Open in IMG/M
3300034106\|Ga0335036_0821248	Not Available	536	Open in IMG/M
3300034272\|Ga0335049_0727264	Not Available	597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	98.20%
Marine	Environmental → Aquatic → Marine	1.80%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	66.67%
Lake	Environmental → Aquatic → Freshwater → Lake	20.72%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	7.21%
River	Environmental → Aquatic → Freshwater → River	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.90%
Coastal	Environmental → Aquatic → Marine → Coastal	0.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	46.85%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	20.72%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	9.91%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	9.01%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	7.21%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	39.64%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	9.91%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	9.01%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.21%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	7.21%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.31%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	5.41%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.60%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.90%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.90%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.90%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.90%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000162	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003796	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006101	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09	Environmental	Open in IMG/M
3300006104	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006108	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07	Environmental	Open in IMG/M
3300006110	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09	Environmental	Open in IMG/M
3300006121	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08	Environmental	Open in IMG/M
3300006126	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH01Aug08	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020681	Freshwater microbial communities from Trout Bog Lake, WI - 21JUL2009 hypolimnion	Environmental	Open in IMG/M
3300020697	Freshwater microbial communities from Trout Bog Lake, WI - 22MAY2008 hypolimnion	Environmental	Open in IMG/M
3300020704	Freshwater microbial communities from Trout Bog Lake, WI - 29JUN2009 hypolimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020719	Freshwater microbial communities from Trout Bog Lake, WI - 18AUG2009 hypolimnion	Environmental	Open in IMG/M
3300020726	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 hypolimnion	Environmental	Open in IMG/M
3300021121	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 epilimnion	Environmental	Open in IMG/M
3300021123	Freshwater microbial communities from Trout Bog Lake, WI - 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021130	Freshwater microbial communities from Trout Bog Lake, WI - 16OCT2007 epilimnion	Environmental	Open in IMG/M
3300021134	Freshwater microbial communities from Trout Bog Lake, WI - 02JUL2007 epilimnion	Environmental	Open in IMG/M
3300021137	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024859	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025353	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH06Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025381	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025387	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025392	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025398	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025402	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025411	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025418	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025426	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025428	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025430	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025466	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025470	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025723	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025773	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09 (SPAdes)	Environmental	Open in IMG/M
3300025781	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300026569	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032561	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18011	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009H_0081831	3300000162	Freshwater	IFIQSERETRLAIGGATNGWKRVDYTVVLQIFHHSLQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA*
TB03JUN2009H_0192181	3300000162	Freshwater	AQAGQMSRAAAVIFIASERETRLAIGGATNGWKRVDFQVVLQIFHHSLQNNAEDAMADFDTLIDNIKNTLRASHNFGDSTQVNVWQGAEPVIDCLYGEPTTSDNGATETFAEIRFDVTQMIQA*
TB03JUN2009E_0016095	3300000176	Freshwater	MSRAAAVIFIASERETRLAIGGATNGWKRVDFQVVLQIFHHSLQNNAEDAMSDFDTLIDNIKNTLRASHNFGDSTQVNVWQGAEPIIDCIYGEPTTSDNGATETFAEIRFDVTQMIQA*
TB03JUN2009E_0536452	3300000176	Freshwater	VIFIASERETRLAIGGATNGWKRVDFQVVLQIFHHSLQNNAEDAMADFDTLIDNIKNTLRASHNFGDSTQVNVWQGAEPVIDCLYGEPTTSDNGATETFAEIRFDVTQMIQA*
TB18AUG2009E_0294351	3300000203	Freshwater	GQLSRSACVIFIQSERETRLAIGGATSGWKRVDFTVVLQLFHHSVQNNAEDAMTDFDTLVDNIKNTLRASHNFGDDTQVNVWQGAEPAIDCLYGEPVTSDNGATETWAEIRFDVTQMIQA
JGI24890J29729_10662122	3300002307	Lentic	FQVNAQPGQLSRSACVIFIQSERETRLAIGGATDGWKRVDFTVVLQLFHHSVQNNAEDAMTDFDTLVDNIKNTLRASHNFGDSSQVNVWQGAEPAIDALYGEPVTSDNGATETWAEIRFDVTQMIQA*
JGI26470J50227_10111491	3300003375	Freshwater	AGQLTRAAAVIHIAGERDSRIAIGGAHSGWKRVDFTVSLQIFTHSVQNDAENAMADFDTLIDNIKNTLRADHNFGDTTGTLVWQGAEPSLDTFYGEPSQSQNGATEIWAEIRFTVTQMIQA*
Ga0007850_10066783	3300003783	Freshwater	NATAGQMSRAAAVIFIASERETRLAIGGATNGWKRVDFQVVLQIFHHSLQNNAEDAMADFDTLIDNIKNTLRASHNFGDSTQVNVWQGAEPVIDCLYGEPMTSDNGATETFAEIRFDVTQMIQA*
Ga0007811_10191901	3300003787	Freshwater	YQVNALPGQLSRAAAVIFIQSERETRLAIGGATSGWKRVDFTVILQIFHHSVQSNAEDAMADFDTLVDNIKNTLRASHNFGDTSQVNVWQGAEPVIDCLYGEPITSDNGATETFAEIRFDVTQMIQA*
Ga0007865_10218431	3300003796	Freshwater	VIFIQSERETRLAIGGATNGWKRVDYTVILQVFHHSMQNHSETAMSDFDTLIDNIKNTLRASHNFGDTTQVNVWQGAEPAIDCLYGEPVTSDXGATETFAEIRFDVTQMIQA*
Ga0007842_10133411	3300003798	Freshwater	RAAAVIFIQSERETRLAIGGATSGWKRVDFTVILQIFHHSVQSNAEDAMADFDTLVDNIKNTLRASHNFGDTSQVNVWQGAEPVIDCLYGEPITSDNGATETFAEIRFDVTQMIQA*
Ga0007817_10022881	3300003804	Freshwater	GATSGWKRVDFTVVLQLFHHSLQNNSEDAMTDFDTLVDNIKNTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETWAEIRFDVTQMIQA*
Ga0007817_10156751	3300003804	Freshwater	TNGWKRVDYTVVLQIFHHSLQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA*
Ga0007856_10067813	3300003815	Freshwater	VNALPGQLSRAAAVIFIQSERETRLAIGGATSGWKRVDFTVILQIFHHSVQSNAEDAMADFDTLVDNIKNTLRASHNFGDTSQVNVWQGAEPVIDCLYGEPITSDNGATETFAEIRFDVTQMIQA*
Ga0063232_100238743	3300004054	Freshwater Lake	RIAIGGATNGWKRIDYSVILQVYQHSMERNAEAAMTTFDTLIDSIKTRLRADHNFGDATGNLVWQGAEPAINTTYGEPATDNGGATETFAEIQFDVTEMIQA*
Ga0065171_10612042	3300004692	Freshwater	QLSRAAAVIFIQSEREKRIAIGGAHNGWKQVDFTVVLQIFHHSVQNNAEDSMADFDTLIDNIKATLRADHRFGDTTGNLVWQGAEPAIDTLYGEPVTSDNGATDTFAEIRFDVTEMIQA*
Ga0007804_11131423	3300004770	Freshwater	IFIQSEREKRIAIGGAHSGWKQVDYTVVLQIFHHSVQNNAEDSMADFDTLIDNIKATLRADHRFGDTTGNLVWQGAEPAIDTLYGEPVTSDNGATDTFAEIRFDVTEMIQA*
Ga0007827_100113241	3300004777	Freshwater	INFQVNATAGQLSRAAAVIFIQSERETRLAIGGATNGWKRVDYTVILQVFHHSMQNHSETAMSDFDTLIDNIKNTLRASHNFGDTTQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA*
Ga0068872_102450933	3300005528	Freshwater Lake	LAIGGATNGWKRVDYTIVLQVYTHSMQRNAEDVMNDFDELIDNIKTRLRSDHTFGDPTGNLVWQGAEPTINARYGEVSTTNEGASEVFAEIEFLVTEMIQA*
Ga0007876_11409612	3300006071	Freshwater	QVNATAGQMSRAAAVIFIQSERETRLAIGGATNGWKRVDYTVVLQVFHHSLQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA*
Ga0007810_10212941	3300006101	Freshwater	AQPGQMSRAAVVIFIQSERETRLAVGGATGGWKRVDFQVILQVFHHSVLNNAEDAMTDFDTLIDNIKNTLRASHNFGDTSQVNVWQGAEPVIDCIYGEPTTSESGATETFAEIRFDVTQMIQA*
Ga0007810_11141481	3300006101	Freshwater	QLSRAAAVIFIQSEREKRIAIGGAHNGWKQVDFTVVLQIFHHSVQNNAEDSMADFDTLIDNIKATLRADHRFGDTTGNLVWQGAEPAIDTLYGESVTSDNGATDTFAEIRFDVTEMIQA*
Ga0007882_102906941	3300006104	Freshwater	GATSGWKRVDFTVVLQLFHHSLQNNAEDAMTDFDTLVDNIKNTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETWAEIRFDVTQMIQA*
Ga0007819_10926032	3300006105	Freshwater	SACVIFIQSERETRLAIGGATSGWKRVDFTVVLQLFHHSVQNNAEDAMTDFDTLVDNIKNTLRASHNFGDATQVNVWQGAEPAIDCLYGEPVTSDNGATETWAEIRFDVTQMIQA*
Ga0007862_10096781	3300006108	Freshwater	TNGWKRVDYTVILQVFHHSMQNHSETAMSDFDTLIDNIKNTLRASHNFGDTTQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA*
Ga0007862_10702791	3300006108	Freshwater	ERETRLAIGGATNGWKRVDFQVILQIFHHSVQNNAEDAMTDFDTLIDNIKDTLRASHNFGDTSQVNVWQGAEPVIDCIYGEPVTSDNGATETFAEIRFDVTQMIQA*
Ga0007871_10666751	3300006110	Freshwater	ERETRLAIGGATNGWKRVDYTVILQVFHHSMQNHSETAMSDFDTLIDNIKNTLRASHNFGDTTQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA*
Ga0007824_10580883	3300006121	Freshwater	RINYQVNATAGQMSRAAAVIFIASERETRLAIGGATSGWKRVDFQVVLQIFHHSLQNNAEDAMADFDTLIDNIKNTLRASHNFGDSTQVNVWQGAEPVIDCLYGEPTTSDNGATETFAEIRFDVTQMIQA*
Ga0007855_10307121	3300006126	Freshwater	TRLAIGGATNGWKRVDYTVVLQVFHHSMQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA*
Ga0070749_104264583	3300006802	Aqueous	GGATNGWKRVDYTVIIQIYQHSMERNSEDAMTAFDTLVDNIKDRLRSDHNFGDTTGTLVWQGAEPRISARYGEPATSNEGATETYAEIEFVVTEMIQA*
Ga0114343_10898823	3300008110	Freshwater, Plankton	IYIAAENETRLAIGGATSGWKRVDYTVILQVYSHSLQRNSEDAMTDFDTLIDNIKTRLRSNHNFGDTTGNLVWQGAEPRISTRYGEPATSNEGATETFAEIEFDVTEMIQA*
Ga0114350_10181947	3300008116	Freshwater, Plankton	RENRLAIGGAHNGWKRVDYTVILQLYVHSLHPESEYAMSDFDILIDNIKERLRSDHNFGDSTGVLVWQGAEPVIIGRYGEPSTAKEGATDIFAELEFEVTEMIQA*
Ga0114363_10816563	3300008266	Freshwater, Plankton	AIGGATNGWKRIDYTVILQIFCVSFHRDSLLVMSDFDTVVDNIKERLRSDHNFGDTSGNLVWQGAEPVIQARYGEPSTEKEGITEIFAEIQFPVTQMIQA*
Ga0114363_11492503	3300008266	Freshwater, Plankton	IGGATNGWKRVDYSVILQIFHHSLQRNAEDAMADFDELVDNIKTRLRSDHNFGDTTGTLVWQGAEPIINASYGEPATSEEGATETFAQLQFDVTEMVQA*
Ga0114977_103271923	3300009158	Freshwater Lake	GGATNGWKRVDYSIVLQVFHHSLQRNAEDAMADFDTLVDNIKTRLRSDHRFGDSTGTLVWQGAEPIINATYGEPATVAEGATETYAELQFDVTEMIQA*
Ga0114977_104877631	3300009158	Freshwater Lake	SQPGQLSRSAVVIFIQSESESRIAIGGAHNGWKRVDYSVILQVYQHSMERNSEKAMDDFDTLIDAIKARLRADHNFGDESERYVWQGAEPQINTTYGEPATNEGGATETFAEIQFLVTEMIQA*
Ga0114978_103574173	3300009159	Freshwater Lake	ATNGWKRVDYSIVLQVFHHSLQRNAEDAMADFDTLVDNIKTRLRSDHRFGDSTGTLVWQGAEPIINATYGEPSTVAEGATETYAEIQFDVTEMIQA*
Ga0114975_100656124	3300009164	Freshwater Lake	ENRLAIGGAHSGWKRVDYSVILQIFHHSLHQLAETAMADFDILVDAIKTRLRSDHNFGDSTGILVWQGAEPVINGVYGEPSTSAEGATETFAELQFDVTEMIQA*
Ga0105097_100712341	3300009169	Freshwater Sediment	GATNGWKRVDYTVIVQIFCISFHREAEDVMTDFDTIVDNIKERLRSDHNFGDPTGNLVWQGAEPVIQARYGEPSTEKEGVTEIFAEIQFPVTQMIQA*
Ga0114964_100291214	3300010157	Freshwater Lake	MSRAAAVIFIQSERETRLAIGGATNGWKRVDFQVILQVFHHSLQNNAEDAMSDFDTLIDNIKNTLRASHNFGDTSQVNVWQGAEPVIDASYGEPVTSDNGATETWAELRFDVTQMIQA*
Ga0157210_10509521	3300012665	Freshwater	AIGGATNGWKRVDYTVIVQIFCISFHREAEDVMTDFDTIVDNIKERLRSDHNFGDPTGNLVWQGAEPVIQARYGEPSTEKEGVTEIFAEIQFPVTQMIQA*
Ga0164296_10205765	3300013093	Freshwater	MSRSAVVIFIQGERETRLAIGGATNGWKRVDYTVVLQVFHHSLQNLAENAMADFDTLIDNIKTTLRADHRFGDTTGNYVWQGAEPEIDTFYGEPVTSDNGATETWAEIRFDVTQMIQA*
Ga0164297_100094029	3300013094	Freshwater	MSRSAVVIFIQGERETRLAIGGATNGWKRVDYTVVLQVFHHSLQNLAENAMADFDTLIDNIKTTLRADHRFGDTTGNYVWQGAEPAIDTFYGEPVTSDNGATETWAEIRFDVTQMIQA*
Ga0136642_10153992	3300013285	Freshwater	MSRAAAVIFIASERETRLAIGGATNGWKRVDFQVILQIFHHSVQNNAEDAMADFDTLIDNIKNTLRASHNFGDTTQVNVWQGAEPVIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA*
Ga0136642_10356231	3300013285	Freshwater	IQSEREKRIAIGGATNGWKQVDFTVVLQIFHHSMQRDAEDAMTDFDTLVDNIKATLRADHRFGDTTGNLVWQGAEPAIDTLYGEPITSDNGATETFAEIRFDVTEMIQA*
Ga0170791_143360313	3300013295	Freshwater	RLAIGGATNGWKRVDYTVILQVYQHSLERNAEAAMTAFDTLIDNIKTRLRSDHNFGDTTGNLVWQGAEPIINGRYGEPATTKEGATETFAELEFMVTEMIQA*
Ga0181347_10010391	3300017722	Freshwater Lake	TPGQLSRAAVVIFIQSERESRIAIGGATNGWKRIDYSVILQVYQHSMERNAEAAMTTFDTLIDSIKTRLRADHNFGDATGNLVWQGAEPAINTTYGEPATDNGGATETFAEIQFDVTEMIQA
Ga0181357_10334651	3300017777	Freshwater Lake	TIVIFIQSETETRLAIGGATNGWKRVDYGVVIQIYHHSLQRDSRDAMVDFDTMVDAIKTRLRSDHRFGDATGTLVWQGAEPIINASYGEPATTNEGATETYAELQFDVTEMIQA
Ga0181359_10904583	3300019784	Freshwater Lake	FIQSETESRLAIGGATNGWKRVDFTVILQVYQHSMERNSEAAMTTFDTLIDDIKTRLRSDHRFGDATGTLVWQGAEPVISTTYGEPATSNEGATETFAEIQFEVTEMIQA
Ga0211734_101529281	3300020159	Freshwater	IVIFIQSETETRLAIGGATNGWKRVDYGVVIQIYHHSLQRDSRDAMTDFDTMVDAIKTRLRSNHNFGDTTGTLVWQGAEPIINASYGEPATTNEGATETYAELQFDVTEMIQA
Ga0214253_1067871	3300020681	Freshwater	AVIFIQSERETRLAIGGATNGWKRVDYTVVLQIFHHSLQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0214230_1265053	3300020697	Freshwater	MSRAAAVIFIQSERETRLAIGGATNGWKRVDYTVVLQVFHHSMQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0214250_10265921	3300020704	Freshwater	IFIQSERETRLAIGGATNGWKRVDYTVVLQIFHHSLQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0214198_10256471	3300020710	Freshwater	IGGATSGWKQVDFTVVLQIFHHSMQRNAEDAMADFDTLIDNIKATLRADHRFGDTSGNLVWQGAEPAIDTLYGEPVTSDNGATETFAEIRFDVTEMIQA
Ga0214207_10355691	3300020716	Freshwater	IGGATNGWKRVDYTVVLQVFHHSLQNLAENAMADFDTLIDNIKTTLRAHHRFGDTTGNYVWQGAEPAIDTFYGEPVTSDNGATETWAEIRFDVTQMIQA
Ga0214257_10384571	3300020719	Freshwater	AAAVIFIQSERETRLAIGGATNGWKRVDYTVVLQVFHHSMQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0214220_10110173	3300020726	Freshwater	QLSRAAAVIFIQSEREKRIAIGGATSGWKQVDFTVVLQIFHHSMQRDAEDAMADFDTLIDNIKATLRADHRFGDTSGNLVWQGAEPAIDTLYGEPVTSDNGATETFAEIRFDVTEMIQA
Ga0214173_1295891	3300021121	Freshwater	RSAVVIFIQGERETRLAIGGATNGWKRVDYTVVLQVFHHSLQNLAENAMADFDTLIDNIKTTLRADHRFGDTTGNYVWQGAEPAIDTFYGEPVTSDNGATETWAEIRFDVTQMIQA
Ga0214212_10154843	3300021123	Freshwater	RAAAVIFIQSERETRLAIGGATNGWKRVDYTVVLQIFHHSLQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0214180_10113871	3300021130	Freshwater	RETRLAIGGATNGWKRVDFQVVLQIFHHSLQNNAEDAMADFDTLIDNIKNTLRASHNFGDSTQVNVWQGAEPVIDCLYGEPTTSDNGATETFAEIRFDVTQMIQA
Ga0214180_10246283	3300021130	Freshwater	IASERETRLAIGGATNGWKRVDFQVVLQIFHHSLQNNAEDAMSDFDTLIDNIKNTLRASHNFGDSTQVNVWQGAEPIIDCIYGEPTTSDNGATETFAEIRFDVTQMIQA
Ga0214171_10178851	3300021134	Freshwater	RSAAVIFIESERETRLAIGGATNGWKRVDYTVVLQVFHHSLQNNSEDAMTDFDTLVDNIKNTLRASHNFGDSSQVNVWQGAEPAIDAMYGEPSTSDNGATETWAELRFDVTQMIQA
Ga0214165_11041422	3300021137	Freshwater	TAGQMSRSALVIFIQSERETRLAIGGATNGWKRVDFTVVLQLFHHSLQNNSEDAMTDFDTLVDNIKNTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETWAEIRFDVTQMIQA
Ga0214192_11835372	3300021142	Freshwater	AVIFIQSERETRLAIGGATNGWKRVDYTVVLQVFHHSLQNNAEDAMADFDTLTDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0181351_11557441	3300022407	Freshwater Lake	SHNGWKRVDYTVVLQVFQHSLHRDSTAAMDDFDTLIDAIKERLRSDHNFGDTSGTLVWQGAEPIIDAFYGEPSTNKEGATETFAELQFDVTQMIQA
Ga0244775_110760633	3300024346	Estuarine	TRLAIGGANSGWKRVDYTMILQIYTHSMHRNAEDVMDDFDVLIDNIKERLRSDHNFGDPTGNLVWQGAEPIINARYGEVSTTNEGASEVFAEIEFDVTEMIQA
Ga0255278_11043261	3300024859	Freshwater	SRAAVVIYIQSETENRLAIGGAHSGWKRIDYSVILQVYHHSLHPLAENAMVDFDTLIDNIKTRLRSDHNFGDTTGTLVWQGAEPVINGVYGEPATSNEGATETFAELQFDVTEMIQA
Ga0208255_1212001	3300025353	Freshwater	QLSRAAAVIFIQSERETRLAIGGATNGWKRVDYTVILQVFHHSMQNHSETAMSDFDTLIDNIKNTLRASHNFGDTTQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0208383_10133961	3300025357	Freshwater	SRAAAVIFIQSERETRLAIGGATNGWKRVDYTVVLQIFHHSLQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0208383_10291191	3300025357	Freshwater	TRLAIGGATSGWKRVDFTVILQIFHHSVQSNAEDAMADFDTLVDNIKNTLRASHNFGDTSQVNVWQGAEPVIDCLYGEPITSDNGATETFAEIRFDVTQMIQA
Ga0208871_10304913	3300025381	Freshwater	VNATAGQMSRAAAVIFIASERETRLAIGGATNGWKRVDFQVVLQIFHHSLQNNAEDAMADFDTLIDNIKNTLRASHNFGDSTQVNVWQGAEPVIDCLYGEPMTSDNGATETFAEIRFDVTQMIQA
Ga0208250_10005451	3300025383	Freshwater	VNATAGQMSRAAAVIFIQSERETRLAIGGATNGWKRVDYTVVLQVFHHSMQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0207959_10222183	3300025387	Freshwater	GATSGWKRVDFTVVLQLFHHSVQNNAEDAMTDFDTLVDNIKNTLRASHNFGDATQVNVWQGAEPAIDCLYGEPVTSDNGATETWAEIRFDVTQMIQA
Ga0208380_10003011	3300025392	Freshwater	FIQSEREKRIAIGGATNGWKQVDFTVVLQVFHHSMQRDAEDAMTDFDTLIDNIKATLRADHRFGDTTGNLVWQGAEPAIDTLYGEPITSDNGATETFAEIRFDVTEMIQA
Ga0208380_10275821	3300025392	Freshwater	QLSRAAAVIFIQSEREKRIAIGGAHNGWKQVDFTVVLQIFHHSVQNNAEDSMADFDTLIDNIKATLRADHRFGDTTGNLVWQGAEPAIDTLYGEPVTSDNGATDTFAEIRFDVTEMIQA
Ga0208251_10037711	3300025398	Freshwater	GGATSGWKRVDFTVVLQLFHHSLQNNSEDAMTDFDTLVDNIKNTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETWAEIRFDVTQMIQA
Ga0208251_10108661	3300025398	Freshwater	KRVDYTVVLQIFHHSLQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0208876_10154241	3300025402	Freshwater	WKRVDFQVVLQIFHHSLQNNAEDAMADFDTLIDNIKNTLRASHNFGDSTQVNVWQGAEPVIDCLYGEPMTSDNGATETFAEIRFDVTQMIQA
Ga0208865_10000511	3300025411	Freshwater	VNATAGQMSRAAAVIFIQSERETRLAIGGATNGWKRVDYTVVLQVFHHSLQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0208253_10028161	3300025418	Freshwater	QPGQLSRSACVIFIQSERETRLAIGGATSGWKRVDFTVVLQLFHHSLQNNAEDAMTDFDTLVDNIKNTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETWAEIRFDVTQMIQA
Ga0208253_10185263	3300025418	Freshwater	NYQVNATAGQMSRAAAVIFIASERETRLAIGGATNGWKRVDFQVVLQIFHHSLQNNAEDAMADFDTLIDNIKNALRASHNFGDSTQVNVWQGAEPVIDCLYGEPTTSDNGATETFAEIRFDVTQMIQA
Ga0208739_10100511	3300025426	Freshwater	RAAVVIFIQSERETRLAVGGATGGWKRVDFQVILQVFHHSVLNNAEDAMTDFDTLIDNIKNTLRASHNFGDTSQVNVWQGAEPVIDCIYGEPTTSESGATETFAEIRFDVTQMIQA
Ga0208506_10590521	3300025428	Freshwater	GWKRVDYTVVLQIFHHSLQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0208622_10233131	3300025430	Freshwater	RETRLAIGGATNGWKRVDFQVVLQIFHHSLQNNAEDAMADFDTLIDNIKNTLRASHNFGDSTQVNVWQGAEPVIDCLYGEPMTSDNGATETFAEIRFDVTQMIQA
Ga0208622_10322631	3300025430	Freshwater	SACVIFIQSERETRLAIGGATSGWKRVDFTVVLQLFHHSVQNNAEDAMTDFDTLVDNIKNTLRASHNFGDTTQVNVWQGAEPAIDCLYGEPVTSDNGATETWAEIRFDVTQMIQA
Ga0208497_10035211	3300025466	Freshwater	GGATNGWKRVDYTVILQVFHHSMQNHSETAMSDFDTLIDNIKNTLRASHNFGDTTQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0208389_100014964	3300025470	Freshwater	QVNATAGQMSRAAAVIFIQSERETRLAIGGATNGWKRVDYTVVLQVFHHSLQNNAEDAMADFDTLVDNIKGTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0208741_100098995	3300025723	Freshwater	AIGGATSGWKRVDFTVVLQLFHHSLQNNAEDAMTDFDTLVDNIKNTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETWAEIRFDVTQMIQA
Ga0208104_10202833	3300025773	Freshwater	FQVNATAGQLSRAAAVIFIQSERETRLAIGGATNGWKRVDYTVILQVFHHSMQNHSETAMSDFDTLIDNIKNTLRASHNFGDTTQVNVWQGAEPAIDCLYGEPVTSDNGATETFAEIRFDVTQMIQA
Ga0208386_10305761	3300025781	Freshwater	GATAGQMSRAAAVIFIQSERETRLAIGGATNGWKRVDFQVILQIFHHSVQNNTEDAMADFDTLVDNIKNTLRASRNFGDTTQVNVWQGAEPAIDCMYGEPITSDNGATETFAEIRFDVTQMIQA
Ga0208258_10458011	3300025783	Freshwater	TRLAIGGATSGWKRVDFTVVLQLFHHSLQNNAEDAMTDFDTLVDNIKNTLRASHNFGDSSQVNVWQGAEPAIDCLYGEPVTSDNGATETWAEIRFDVTQMIQA
Ga0255277_10402551	3300026569	Freshwater	ENRIAIGGAHNGWKRVDYSVIIQIFHHSLQPDARKAMDDFDTLVDAIKARLRSDHNFGDESGVLVWQGAEPIINGNYGEPATTNEGATETFAELQFDVTEMIQA
Ga0209084_13817642	3300027749	Freshwater Lake	TRLAIGGATNGWKRVDYSIIIQVYHHSLERNAEAAMTSFDTLIDAIKTRLRSDHNFGDSTGTLVWQGAEPVINATYGEPATNNGGATETFAEIQFDVTEMIQA
Ga0209296_13135853	3300027759	Freshwater Lake	IAIGGATNGWKRVDYSIILQVYQHSLERNSQDAMVSFDTLIDAIKTRLRADHNFGDATGTLVWQGAEPEINCTYGEPSSVEGSPATETFAEIQFDVTEMIQA
Ga0209229_102727513	3300027805	Freshwater And Sediment	GGATNGWKRVDYSVILQIFHHSLHKNSEDAMADFDTLVDNIKTRLRSNHNFGDTTGTLVWQGAEPIISASYGEPATIAEGATETYAELQFDVTEMIQA
Ga0316219_10180911	3300031759	Freshwater	NYQVNATAGQMSRAAAVIFIASERETRLAIGGATNGWKRVDFQVVLQIFHHSLQNNAEDAMSDFDTLIDNIKNTLRASHNFGDSTQVNVWQGAEPIIDCIYGEPTTSDNGATETFAEIRFDVTQMIQA
Ga0315909_108861862	3300031857	Freshwater	ATNGWKRVDYTVIVQIYQHSLERNSENAMTAFDTLVDNIKDRLRSDHNFGDTTGTLVWQGAEPRISARYGEPATSQEGATETYAEIEFVVTEMIQA
Ga0315904_106415231	3300031951	Freshwater	VVFIQAEDESRIAVGGATNGWKRVDYTVIIQIYQHSLERNSENAMTAFDTLVDNIKDRLRSDHNFGDTTGTLVWQGAEPRISARYGEPATSQEGATETYAEIEFVVTEMIQA
Ga0315901_110080033	3300031963	Freshwater	TRLAIGGATNGWKRVDYNVIIQIFHHSLERNAQDAMNSFDTLVDAIKTRLRSDHNFGDTTGTLVWQGAEPIINGTYGEPSTTNDGATETFAELQFDVTEMIQA
Ga0315906_101738044	3300032050	Freshwater	VFIAQERENRLAIGGAHSGWKRVDYTVILQLYVHSLHPNSEDAMSDFDILIDNIKERLRSDHNFGDATGVLVWQGAEPVIIGRYGEPATAKEGATDIFAELEFDVTEMIQA
Ga0315906_107050411	3300032050	Freshwater	RLAIGGAHSGWKRVDYAVVIQLYTHSMHTNAESAMTDFDTLVDNIKERLRSDHNFGDTTGNLVWQGAEPIIRARYGEPATSNEGATETYAELEFDVTEMIQA
Ga0315902_109538881	3300032093	Freshwater	NRLAIGGAHSGWKRVDYSVILQIFHHSLHQLAETAMADFDTLVDAIKTRLRSDHNFGDSTGILVWQGAEPVINGVYGEPSTSAEGATETFAELQFDVTEMIQA
Ga0315903_101416041	3300032116	Freshwater	MTRSAAVVFIAAENETRLAIGGAHSGWKRVDYSVVIQLYTHSMHTNAESAMTDFDTLVDNIKERLRSDHNFGDTTGNLVWQGAEPIIRARYGEPATSNEGATETYAELEFDVTEMIQA
Ga0315903_106707001	3300032116	Freshwater	QPGQLTRSAVVIFIVREDENRLAIGGATNGWKRVDYTVILQVFCHSLQRNSEDVMTDFDTLIDNIKTRLRSNHNFGDSTGNLVWQGAEPAIRARYGEPATSNEGATEIFAEIEFDVTQMIQA
Ga0316222_11590031	3300032561	Freshwater	AGQMSRSAVVIFIQGERETRLAIGGATNGWKRVDYTVVLQVFHHSLQNLAENAMADFDTLIDNIKTTLRADHRFGDTTGNYVWQGAEPAIDTFYGEPVTSDNGATETWAEIRFDVTQMIQ
Ga0334980_0341208_2_319	3300033816	Freshwater	YETRLAIGGATNGWKRVDYTVIVQIFCISFHREAEDVMTDFDTIVDNIKERLRSDHNFGDPTGNLVWQGAEPVIQARYGEPSTEKEGVTEIFAEIQFPVTQMIQA
Ga0335020_0540470_2_355	3300034082	Freshwater	SRAACVVFIQQETETRLAIGGATNGWKRIDYTVILQIFQHSLHRDSTAAMDDFDTLIDAIKERLRSNHNFGDTTGNLVWQGAEPIIDAFYGEPSTNKEGATETFAELQFDVTQMIQA
Ga0335010_0418974_3_305	3300034092	Freshwater	AIGGAHNGWKRIDYTLILQVYTHSMHRNAEDVMNDFDVLIDNIKERLRSDHNFGDPTGNLVWQGAEPVISARYGEVSTTNEGASEVFAEIEFLVTEMIQA
Ga0335029_0243564_828_1166	3300034102	Freshwater	VVYIADEYETRLAIGGATNGWKRIDYTVIVQIFCVSFHRNSEFAMADFDEVVDSIKERLRSDHNFGDPSVNLVWQGAEPVIQGRYGEPSTEKEGVTEIFAEIQFPVTQMIQA
Ga0335036_0821248_207_536	3300034106	Freshwater	ISSETENRLAIGGATNGWKRVDYNVIIQIYQHSMERNSQDAMIAFDTLIDNLKERLRSDHNFGDPTGNLVWQGAEPVINGRYGEPATTKEGATETFAELEFMVTEMIQA
Ga0335049_0727264_298_597	3300034272	Freshwater	IGGATNGWKRVDYTVIVQIFCISFHREAEDVMTDFDTIVDNIKERLRSDHNFGDPTGNLVWQGAEPVIQARYGEPSTEKEGVTEIFAEIQFPVTQMIQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085373

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences