Metagenome Family F085862

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F085862
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	59 residues
Representative Sequence	MSNLAEKSEKNPVTTETEEKKWELFESREARLRDQKHLEMAYEWLRNRGKTVLLQGGIES
Number of Associated Samples	65
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.79 %
% of genes near scaffold ends (potentially truncated)	18.02 %
% of genes from short scaffolds (< 2000 bps)	77.48 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (59.459 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (15.315 % of family members)
Environment Ontology (ENVO)	Unclassified (23.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (33.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01402	RHH_1	24.32
PF04366	Ysc84	5.41
PF13401	AAA_22	5.41
PF07589	PEP-CTERM	2.70
PF01966	HD	1.80
PF12146	Hydrolase_4	1.80
PF00753	Lactamase_B	1.80
PF13336	AcetylCoA_hyd_C	0.90
PF10576	EndIII_4Fe-2S	0.90
PF01738	DLH	0.90
PF13502	AsmA_2	0.90
PF01833	TIG	0.90
PF02371	Transposase_20	0.90
PF14236	DUF4338	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	5.41
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.46 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.46 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.46 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.35 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	47.75 %
Unclassified	root	N/A	40.54 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	2.70 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	47.75 %
Unclassified	root	N/A	40.54 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	27.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.52 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.70 %
Deltaproteobacteria bacterium RBG_16_48_10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_48_10	1.80 %
Deltaproteobacteria bacterium RBG_16_49_23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_49_23	1.80 %
Deltaproteobacteria bacterium ADurb.Bin135	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	0.90 %
Deltaproteobacteria bacterium CG03_land_8_20_14_0_80_45_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG03_land_8_20_14_0_80_45_14	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000311\|WSSedA1Ba3DRAFT_1101659	Not Available	551	Open in IMG/M
3300002465\|LO132_10047923	Not Available	1729	Open in IMG/M
3300002961\|JGI11641J44799_10075537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	953	Open in IMG/M
3300003859\|Ga0031653_10200713	Not Available	522	Open in IMG/M
3300003861\|Ga0031654_10054831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1119	Open in IMG/M
3300004481\|Ga0069718_12955239	Not Available	692	Open in IMG/M
3300006224\|Ga0079037_100332454	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300006224\|Ga0079037_100435102	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1248	Open in IMG/M
3300006224\|Ga0079037_101763459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	618	Open in IMG/M
3300006930\|Ga0079303_10052193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1449	Open in IMG/M
3300009053\|Ga0105095_10019695	Not Available	3627	Open in IMG/M
3300009053\|Ga0105095_10048998	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2272	Open in IMG/M
3300009053\|Ga0105095_10119528	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1433	Open in IMG/M
3300009053\|Ga0105095_10433246	Not Available	727	Open in IMG/M
3300009078\|Ga0105106_10278635	Not Available	1213	Open in IMG/M
3300009078\|Ga0105106_10898299	Not Available	630	Open in IMG/M
3300009082\|Ga0105099_10085364	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1713	Open in IMG/M
3300009082\|Ga0105099_10571740	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	691	Open in IMG/M
3300009087\|Ga0105107_10308504	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1102	Open in IMG/M
3300009091\|Ga0102851_10273601	Not Available	1634	Open in IMG/M
3300009091\|Ga0102851_12644806	Not Available	575	Open in IMG/M
3300009111\|Ga0115026_10005925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4963	Open in IMG/M
3300009153\|Ga0105094_10090008	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1725	Open in IMG/M
3300009171\|Ga0105101_10374992	Not Available	692	Open in IMG/M
3300009760\|Ga0116131_1043291	Not Available	1485	Open in IMG/M
3300012931\|Ga0153915_10167299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2394	Open in IMG/M
3300012931\|Ga0153915_10372330	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_48_10	1611	Open in IMG/M
3300012931\|Ga0153915_10531097	Not Available	1347	Open in IMG/M
3300012931\|Ga0153915_11044338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	952	Open in IMG/M
3300012931\|Ga0153915_11460389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	799	Open in IMG/M
3300012931\|Ga0153915_11970684	Not Available	683	Open in IMG/M
3300012931\|Ga0153915_12132779	Not Available	656	Open in IMG/M
3300012931\|Ga0153915_12228289	Not Available	641	Open in IMG/M
3300012931\|Ga0153915_12951251	Not Available	554	Open in IMG/M
3300012964\|Ga0153916_10019014	All Organisms → cellular organisms → Bacteria	5762	Open in IMG/M
3300012964\|Ga0153916_10122832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2496	Open in IMG/M
3300012964\|Ga0153916_10349074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	1528	Open in IMG/M
3300012964\|Ga0153916_10919076	Not Available	956	Open in IMG/M
3300012964\|Ga0153916_11807658	Not Available	683	Open in IMG/M
3300012964\|Ga0153916_13293000	Not Available	508	Open in IMG/M
3300017929\|Ga0187849_1126048	Not Available	1056	Open in IMG/M
3300017939\|Ga0187775_10436601	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300017939\|Ga0187775_10475422	Not Available	530	Open in IMG/M
3300017944\|Ga0187786_10321857	Not Available	643	Open in IMG/M
3300017961\|Ga0187778_10217552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1220	Open in IMG/M
3300017961\|Ga0187778_10588223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	745	Open in IMG/M
3300017966\|Ga0187776_10314563	Not Available	1022	Open in IMG/M
3300017966\|Ga0187776_11202880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300017966\|Ga0187776_11373539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300018032\|Ga0187788_10074765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1190	Open in IMG/M
3300018055\|Ga0184616_10065226	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1246	Open in IMG/M
3300018064\|Ga0187773_10030367	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2379	Open in IMG/M
3300018068\|Ga0184636_1021298	Not Available	1990	Open in IMG/M
3300018068\|Ga0184636_1048886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1382	Open in IMG/M
3300018070\|Ga0184631_10043740	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1615	Open in IMG/M
3300018089\|Ga0187774_10101003	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1421	Open in IMG/M
3300018089\|Ga0187774_10591431	Not Available	716	Open in IMG/M
3300018089\|Ga0187774_10786589	Not Available	641	Open in IMG/M
3300018090\|Ga0187770_11594778	Not Available	532	Open in IMG/M
3300022208\|Ga0224495_10221694	Not Available	783	Open in IMG/M
3300025164\|Ga0209521_10468624	Not Available	668	Open in IMG/M
3300025174\|Ga0209324_10090017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2104	Open in IMG/M
3300026348\|Ga0256813_1006592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	883	Open in IMG/M
3300027713\|Ga0209286_1001825	All Organisms → cellular organisms → Bacteria	6772	Open in IMG/M
3300027713\|Ga0209286_1158541	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300027715\|Ga0208665_10069342	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1055	Open in IMG/M
3300027723\|Ga0209703_1324333	Not Available	542	Open in IMG/M
3300027726\|Ga0209285_10051651	Not Available	1217	Open in IMG/M
3300027731\|Ga0209592_1025068	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2246	Open in IMG/M
3300027740\|Ga0214474_1110750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1033	Open in IMG/M
3300027792\|Ga0209287_10340647	Not Available	576	Open in IMG/M
3300027871\|Ga0209397_10651178	Not Available	528	Open in IMG/M
3300027877\|Ga0209293_10025602	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300027900\|Ga0209253_10113334	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2216	Open in IMG/M
3300031707\|Ga0315291_10335942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_49_23	1464	Open in IMG/M
3300031885\|Ga0315285_10657851	Not Available	682	Open in IMG/M
3300031949\|Ga0214473_10285355	Not Available	1889	Open in IMG/M
3300032069\|Ga0315282_10027357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7458	Open in IMG/M
3300032069\|Ga0315282_10028669	All Organisms → cellular organisms → Bacteria	7173	Open in IMG/M
3300032070\|Ga0315279_10075574	All Organisms → cellular organisms → Bacteria	3015	Open in IMG/M
3300032783\|Ga0335079_10036922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5613	Open in IMG/M
3300032829\|Ga0335070_10002996	All Organisms → cellular organisms → Bacteria	19690	Open in IMG/M
3300033406\|Ga0316604_10040835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2384	Open in IMG/M
3300033406\|Ga0316604_10308857	Not Available	862	Open in IMG/M
3300033414\|Ga0316619_11839962	Not Available	549	Open in IMG/M
3300033433\|Ga0326726_10083212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2840	Open in IMG/M
3300033433\|Ga0326726_10117177	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_49_23	2401	Open in IMG/M
3300033433\|Ga0326726_10162203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2045	Open in IMG/M
3300033433\|Ga0326726_10194113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1871	Open in IMG/M
3300033433\|Ga0326726_10195864	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1863	Open in IMG/M
3300033433\|Ga0326726_10221147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1754	Open in IMG/M
3300033433\|Ga0326726_10495228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1168	Open in IMG/M
3300033433\|Ga0326726_10712721	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	968	Open in IMG/M
3300033434\|Ga0316613_10631628	Not Available	732	Open in IMG/M
3300033480\|Ga0316620_10102024	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300033480\|Ga0316620_10157957	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1831	Open in IMG/M
3300033480\|Ga0316620_10669286	Not Available	983	Open in IMG/M
3300033480\|Ga0316620_11778759	Not Available	611	Open in IMG/M
3300033480\|Ga0316620_12231519	Not Available	544	Open in IMG/M
3300033486\|Ga0316624_10001225	All Organisms → cellular organisms → Bacteria	9959	Open in IMG/M
3300033486\|Ga0316624_10145172	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1760	Open in IMG/M
3300033486\|Ga0316624_10813525	Not Available	831	Open in IMG/M
3300033489\|Ga0299912_10849573	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	693	Open in IMG/M
3300033513\|Ga0316628_100209665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2349	Open in IMG/M
3300033513\|Ga0316628_100943197	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_48_10	1143	Open in IMG/M
3300033521\|Ga0316616_103536534	Not Available	588	Open in IMG/M
3300033991\|Ga0334965_0049505	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2006	Open in IMG/M
3300034078\|Ga0373900_065479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	674	Open in IMG/M
3300034090\|Ga0326723_0119442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG03_land_8_20_14_0_80_45_14	1147	Open in IMG/M
3300034090\|Ga0326723_0171376	Not Available	958	Open in IMG/M
3300034099\|Ga0373902_136115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.20%
Engineered	Engineered	1.80%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	54.95%
Terrestrial	Environmental → Terrestrial	43.24%
Bioremediation	Engineered → Bioremediation	1.80%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	48.65%
Soil	Environmental → Terrestrial → Soil	32.43%
Peat	Environmental → Terrestrial → Peat	9.01%
Sediment	Environmental → Aquatic → Sediment	3.60%
Marine	Environmental → Aquatic → Marine	2.70%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.80%
Metal	Engineered → Bioremediation → Metal	1.80%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	27.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	18.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.01%
Lake	Environmental → Aquatic → Freshwater → Lake	5.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.60%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.70%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.80%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	1.80%
Microbialites	Environmental → Aquatic → Freshwater → Microbialites	0.90%
Sediment	Environmental → Aquatic → Marine → Sediment	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	27.93%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	18.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	18.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.01%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.60%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.70%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.70%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.80%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	1.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Microbialites → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	15.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	15.32%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	13.51%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	12.61%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	9.01%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.41%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	4.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.60%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	2.70%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.70%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.80%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Microbialites → Unclassified → Freshwater Lake	0.90%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000311	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300002465	Anoxic frehswater biofilm from Lago dell Orsa, Frasassi caves, Italy	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003859	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300022208	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300026348	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 C6	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027740	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033991	Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bact	Environmental	Open in IMG/M
3300034078	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.1	Engineered	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034099	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.3	Engineered	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedA1Ba3DRAFT_11016591	3300000311	Wetland	MSYLAEKPEKNPVTTEAKEKKWEIFESREASLRDQKHLEMAYEWLRNRGKTDPLKGAIES
LO132_100479231	3300002465	Freshwater Lake	MSNLAERYEKNPVTEETEEKGWELFENEEARLRDQKHLEMAYEWLRRRGKSVLLKGAIESP*
JGI11641J44799_100755372	3300002961	Wetland	MSYLAEKPEKNPVTTEAKEKKWEIFESREASLRDQKHLEMAYEWLRNRGKTDPLKGAIESL*
Ga0031653_102007131	3300003859	Freshwater Lake Sediment	MSHLAEKSEKKPVTTETEEKQWEIFENREANLRDQKHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0031654_100548312	3300003861	Freshwater Lake Sediment	MSNLAEKSEKNPVTTEAEEKKWELFENREARLRDQKHLEMACEWLRNRGKMVLLQGAIESL*
Ga0069718_129552393	3300004481	Sediment	MSNLAERYEKNPVTKETEEKGWELFENEEARLRDQKHLEMAYEWLRSRGKSVLLKGAIESP*
Ga0079037_1003324541	3300006224	Freshwater Wetlands	MSHLVEKPEKTPVTPETEERKWEIFENREARLRDQKHLEMAYEWLRNRGKADLLKGTIESL*
Ga0079037_1004351024	3300006224	Freshwater Wetlands	MNHLAEKLEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0079037_1017634592	3300006224	Freshwater Wetlands	MNHLLEKPEKNPVTTETEEKKWEIFENGEARLRDQKHLEMAYEWLRNRGKTDLLKGAIESF*
Ga0079303_100521933	3300006930	Deep Subsurface	MNHLAEKPEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0105095_100196951	3300009053	Freshwater Sediment	MSHLAEKSEKNRVTTETEKKKWEIFENREASLRDQKHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0105095_100489982	3300009053	Freshwater Sediment	MSKLSEKFEENSLITEIEEKEWKLFENREAKLRDQRHLEMAYEWLRSRRKIVPLKDGIESL*
Ga0105095_101195283	3300009053	Freshwater Sediment	MNPLAEKLEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0105095_104332461	3300009053	Freshwater Sediment	MNHLAEKCEKKTVTTEAEEKKWEIFENREAILRDQKHLEMAYEWLRNRGKTNLLKGSIERL*
Ga0105106_102786352	3300009078	Freshwater Sediment	MSHLAEKSEKNRVTTETEKKKWEIFENREASLRDQKHLEMAYEWLRNRGKKDLLKGAIESL*
Ga0105106_108982993	3300009078	Freshwater Sediment	MSKLSEKFEENSLIREIEEKEWKLFENREEKLRDQRHLEMAYEWLRSRRKIVPLKDGIE
Ga0105099_100853641	3300009082	Freshwater Sediment	MSHLVEKPEKTPVTPETEERKWEIFENREARLRDQKHLEMAYEW
Ga0105099_105717402	3300009082	Freshwater Sediment	GMNHLAEKPEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKADLLKGAIESL*
Ga0105107_103085042	3300009087	Freshwater Sediment	MSHLAEKSKKNRVTTETEKKKWEIFENREASLRDQKHLEMAYEWLRNKGKTDLLKGAIESL*
Ga0102851_102736012	3300009091	Freshwater Wetlands	MNPLAEKPEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0102851_126448062	3300009091	Freshwater Wetlands	MSHLAEKPEKNPVTKETEEKKWEIFENREARLRDQKHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0115026_100059253	3300009111	Wetland	MSHLVEKPEKTPVTPETEERKWEIFENREARLRDQKHLEMAYEWLRNRGKADLLKGAIESL*
Ga0105094_100900083	3300009153	Freshwater Sediment	MSKLSEKFEENYLITEIEEKEWKLFENREAKLRDQKHLEMAYEWLRRRGKI*
Ga0105101_103749922	3300009171	Freshwater Sediment	MSHLVEKPEKTPVTPETEERKWEIFENREARLRDQKHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0116131_10432911	3300009760	Peatland	MGNPAEKYWENPVTTEIKGKKWELFENTEARLRNHEHLEKAYKWLRNRGKTVPLKGEIESL*
Ga0153915_101672994	3300012931	Freshwater Wetlands	MGNLAEKSEKNPFTPEAEEKKSELFENREARLRDQKHLEMAYEWLRNRGKIV
Ga0153915_103723303	3300012931	Freshwater Wetlands	MSNLAEKSEKNPLTKETEEKKWELFENREARLRDQKHLEMAYEWLRSKGKIALFKGAIESL*
Ga0153915_105310974	3300012931	Freshwater Wetlands	MGNPAEKFWENPITTEIKGKKWELFENMEARLRNQEHLQKAYEWLRNRGKIVPSECGIESL*
Ga0153915_110443382	3300012931	Freshwater Wetlands	LGNLAEKTGKNQVTAEMEEKKWELFESTEAKLRDMEHLEMAYEWLRNRQKPAQLKRAIEDL*
Ga0153915_114603892	3300012931	Freshwater Wetlands	MSNLIEKFEKNPVATEIEEKERKLFENKEAELRNQRHLELAYEWLRSRGKIVLLKDGIESF*
Ga0153915_119706841	3300012931	Freshwater Wetlands	MSNLAEKLEKRPVTTDREEKKWELFENREARLRDQMHLEMAYEWLRSRGKTDLLKGAIENL*
Ga0153915_121327792	3300012931	Freshwater Wetlands	VERKEVSGMSNLAEKSERNPVTTETEEKKWELFENWEARLKDQKHLEMACEWLRSRGKTDLLKGAIENV*
Ga0153915_122282891	3300012931	Freshwater Wetlands	MSNLAEKSEKKPVTTETEERKWELFENREARLRDQKHLEMAYEWLRNRGKMVVLQGAIESL*
Ga0153915_129512511	3300012931	Freshwater Wetlands	MGNPAEKFWANPVTTEIKEQKWEVFEHTEARLRNQEHLQKAYEWLRNRGKI
Ga0153916_100190148	3300012964	Freshwater Wetlands	SAKRKEVSRMGNPAEKFWENPITTEIKGKKWELFENMEARLRNQEHLQKAYEWLRNRGKIVPSECGIESL*
Ga0153916_101228322	3300012964	Freshwater Wetlands	MSNLAEKLEKRPVTTDREEKKWEFFENREARLRDQMHLEMAYEWLRSRGKTDLLKGAIENL*
Ga0153916_103490742	3300012964	Freshwater Wetlands	VERKEVSGMSNLAEKSERNPVTTETEEKKWELFESWEARLRDQKHLEMAYEWLRSRGKTDLLKAAIENV*
Ga0153916_109190761	3300012964	Freshwater Wetlands	MSNLAEKSEKNPFTTGAEEKKCELFENREARLRDQKHLEMAYEWLRNRGKIVLLKGAIESL*
Ga0153916_118076581	3300012964	Freshwater Wetlands	MSNLAGRYEKNPVPTETEEKEWELFENEEARLRDQKHLEMAYEWLRSRGKSVLLKGAIESP*
Ga0153916_132930001	3300012964	Freshwater Wetlands	MSNLAEKSGKNPFTAEAEEKKCELFENREARLRDQKHLEMAYEWLRNRGKIMLLKGAIESL*
Ga0187849_11260481	3300017929	Peatland	MGNPAEKYWENPVTTEIKGKKWELFENTEARLRNHEHLEKAYKW
Ga0187775_104366013	3300017939	Tropical Peatland	MSNVIERSEKIPITTEMEDKKRELFENMEARLRDQKHLEMAYEWLRNRGKMTLSKGAVEN
Ga0187775_104754221	3300017939	Tropical Peatland	MSNLAEETVKNPVTKETEEKKSEAFTSREARLRNQKHLEMAYEWLRNRGKRVESKGAVEN
Ga0187786_103218571	3300017944	Tropical Peatland	MSNVIERSEKIPITTEMEDKKRELFENMEARLRDQKHLEMAYEWLRNR
Ga0187778_102175524	3300017961	Tropical Peatland	MSNLAERHKKNPVAREIEEMRWEAFESKEARLRDQKHLEMAYEWLRNRGKKVLLRGAIEN
Ga0187778_105882232	3300017961	Tropical Peatland	MSNPAEKFREVPVTREIKAKRWEFFENREARSRNQRHLEKAYEWLSRGKIVPLKGGTESPKLNQPT
Ga0187776_103145634	3300017966	Tropical Peatland	MSNLAERQKKNPVARKTEEMRWEAFEGKEARLRDQKHLEMAYEWLRNRGKMVLLRGAIEN
Ga0187776_112028801	3300017966	Tropical Peatland	MGNPAEKFLEKPVTTELKGKKWELFENTEARLRNQEHLEKAYDWLKSRGKIVPLKGGTES
Ga0187776_113735392	3300017966	Tropical Peatland	MSNLAEKSDKNPVTTETEKKKWELFENKEARLRDQKHLEMAYEWLRNRGKMVLLQGGIKR
Ga0187788_100747653	3300018032	Tropical Peatland	MSNLAEKSEKNPVTTETEEKKWEPFENREARLRDQKHLEMAYEWLRNRGKIVLLQGGIKS
Ga0184616_100652263	3300018055	Groundwater Sediment	MSNLAEKSEKNPVTTEAEEKKWELFENREARLRDQKHLEMACEWLRNRGKMVLLQGAIES
Ga0187773_100303673	3300018064	Tropical Peatland	MSNLAEKPKKNPVTAETGKKKWELFEDREARLRNQRHLEMAYEWLKNRGKIAPFQGSLEN
Ga0184636_10212984	3300018068	Groundwater Sediment	MSNLAEKSKKNPVTTEAEEKKWELFENREARLRDQKHLEMAYEWLRNRGKMALLQGAIES
Ga0184636_10488861	3300018068	Groundwater Sediment	MSNLAEKSEKNPVTTEAEEKKWELFENREARLRDQKHLEMACEWLRNRGK
Ga0184631_100437403	3300018070	Groundwater Sediment	MSNLAEKSEKNPVTTEAEEKKWELFENREARLRDQKHLEMACEWLRNRGKMALLQGAIES
Ga0187774_101010032	3300018089	Tropical Peatland	MSNLAEKPEKNPVPTEMEEKKWELFESREARLRDQKHLEMAYEWLRNRGKMVLLKRAIEN
Ga0187774_105914312	3300018089	Tropical Peatland	MSNVIERSEKIPITTEMEDKKRELFENMEARLRDQKHLEMAYEWLRNRGKMTLLKGAVEN
Ga0187774_107865891	3300018089	Tropical Peatland	MSNLTEKPEKNPVTTEMEKKKRDLFEDREARLRDQKHLEMAYEWLRNRGKTALFQGSVEN
Ga0187770_115947783	3300018090	Tropical Peatland	MSNLAERHKKNPVAREIEEMRWEAFESKEARLRDQKHLEMAYEWLRNRGKKVLLRGAI
Ga0224495_102216942	3300022208	Sediment	MSNLLEKFEKNSLITEIGEKEWELFENREAKLRNQKHLEMAYEWLRRRGKIELLKGRIES
Ga0209521_104686241	3300025164	Soil	VERKEVSGMSNLAEKSERNPVTIETEEKKWELFESWEARLRDQKHLEMAYEWLRSRGKTDLLKGASENS
Ga0209324_100900173	3300025174	Soil	MSNLAEKSERNPVTTETEEKKWELFESWEARLRDQKHLEMAYEWLRSRGKTDLLKGASEN
Ga0256813_10065922	3300026348	Sediment	MSHLAEKSERNPATTEPEEKQWEIFDNREASLRNQKHLEMAYEWLRNKGKTDLLKGASES
Ga0209286_10018251	3300027713	Freshwater Sediment	MNPLAEKLEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIES
Ga0209286_11585412	3300027713	Freshwater Sediment	MSKLSEKFEENSLIREIEEKEWKLFENREEKLRDQRHLEMAYEWLRSRRKIVPLKDGI
Ga0208665_100693422	3300027715	Deep Subsurface	MNHLAEKPEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIES
Ga0209703_13243332	3300027723	Freshwater Sediment	MSKLSEKFEENSLITEIEEKEWKLFENREAKLRDQRHLEMAYEWLRSRRKIVPLKD
Ga0209285_100516511	3300027726	Freshwater Sediment	MNHLAEKLEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIES
Ga0209592_10250684	3300027731	Freshwater Sediment	MSKLSEKFEENSLITEIEEKEWKLFENREAKLRDQRHLEMAYEWLRSRRKIVPLKDGIES
Ga0214474_11107502	3300027740	Soil	MGNLAEKSGENPVTTETEEKKWELFENREARLRDQKHLEMAYEWLRNRGKIVLLKGAVEN
Ga0209287_103406472	3300027792	Freshwater Sediment	MSKLSEKFEENSLITEIEEKEWKLFENREAKLRDQRHLEMAYEWLRNRGKTDLLKGAIES
Ga0209397_106511782	3300027871	Wetland	MSHLVEKPEKTPVTPETEERKWEIFENREARLRDQKHLEMAYEWLRNRGKADLLKGTIES
Ga0209293_100256024	3300027877	Wetland	MSHLVEKPEKTPVTPETEERKWEIFENREARLRDQKHLEMAYEWLRNRGKADLLKGAIES
Ga0209253_101133343	3300027900	Freshwater Lake Sediment	MSHLAEKSEKKPVTTETEEKQWEIFENREANLRDQKHLEMAYEWLRNRGKTDLLKGAIES
Ga0315291_103359423	3300031707	Sediment	MSNLSEKFEKNSVITEIEEKEWKLFENRGAKLRDQKHLEMAYEWLRRRGKI
Ga0315285_106578511	3300031885	Sediment	MSNLSEKFEKNSVITEIEEKEWKLFENRGAKLRDQKHLEMAYEWLRRRGCRRYPKLT
Ga0214473_102853554	3300031949	Soil	MSNLAEKSEKNPVTTEAEEKKWELFGNREARLRDQKHLEMAHEWLRNRGKMVLLKGAIES
Ga0315282_100273579	3300032069	Sediment	MGNPAEKFWKNPVTTEIKGKKWELFENTEARLRNQEHLEKAYEWLRNRGKIVPLECGIES
Ga0315282_100286694	3300032069	Sediment	VSNLIEKFEKNPVATEIEEKEWKLFENREAKLRDQRHLELAYEWLRSRRKIVLLKDGIES
Ga0315279_100755744	3300032070	Sediment	MSNLIEKFEKNPVATEIEEKEWKLFENREAKLRDQRHLELAYEWLRSRRKIVLLKDGIES
Ga0335079_100369224	3300032783	Soil	MSDLAEKSDKNAVTQGADGKKWHLIKNREARLRDLKHFELAYEWLKSRGKIVIEN
Ga0335070_100029964	3300032829	Soil	VNNLIGKFEKNPVATEIEEKEWKLFDNREAKLRDQTHLELAYEWLKSRRKIVLLKD
Ga0316604_100408354	3300033406	Soil	EVSGMNHLAEKLEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIESL
Ga0316604_103088571	3300033406	Soil	MNHLAEKPEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRG
Ga0316619_118399621	3300033414	Soil	MSYLAEKPEKNPVTTETKEKKWEIFESREASLRDQKHLEMAYEWLRNRRKTDPLKGAIES
Ga0326726_100832126	3300033433	Peat Soil	MSNLAEKSEKNPVTTETEEKKWELFESREARLRDQKHLEMAYEWLRNRGKTVLLQGGIES
Ga0326726_101171773	3300033433	Peat Soil	MSNLAEKSEKNPVTTETEEKKWEPFENREARLRDQKHLEMAYEWLRNRGKMVLLQGGIKS
Ga0326726_101622032	3300033433	Peat Soil	MNNPAEKFCENPATTEIKGKKGELFENTEARLRNQEHLEKAYEWLRNKGKIVPLKGGIES
Ga0326726_101941134	3300033433	Peat Soil	LIGKFEKNPVATEIEEKEWNLFENREAKLRDQTHLELAYEWLKSRRKIVLLKD
Ga0326726_101958644	3300033433	Peat Soil	MRNLAEKSERNAATIETEEKKWELFENTEARLRDQEHFKLAYEWLKRRGKIVLLKGVVES
Ga0326726_102211472	3300033433	Peat Soil	MNNLADKSEKNAVTIEIEEKKWELFENREARLRDREHFELAYEWLRNRGKIVPLKSVIES
Ga0326726_104952282	3300033433	Peat Soil	MGNPAEKFWENPVTTEIKGKKWELFENTEARLRNQEHLEKAYEWLRNRGKIVPLE
Ga0326726_107127212	3300033433	Peat Soil	MGNPAEKFWENPVTTEMKGKKWELFENTEARLRNQEHLEKAYEWLRNRGKIVPLE
Ga0316613_106316281	3300033434	Soil	MSHLAEKSVQNPVMTEMEKKQREIFEDREASLRDQKHLEMAYEWLRNRGKTDLLKG
Ga0316620_101020244	3300033480	Soil	MSNLAEKPEKIHITTEMDEKKWELFESREARLRDQKHLEMAYEWLRNRGKMMRLKGATEN
Ga0316620_101579572	3300033480	Soil	MSNLIEKFEKNPVATEIEEKERKLIENREAKLRNQRHLELAYEWLRSRGKIVLLKDGIES
Ga0316620_106692861	3300033480	Soil	MSHLAEKPEKNPVTKETEEKKWEIFENREARLRDQKHLEMAYEWLRNRGKTDPLKGAIES
Ga0316620_117787592	3300033480	Soil	MGNLAEKSWKNPVTVETEEKKWELFENREARLRDQKHLEMAYEWLKNRGKIGLLKGAIDN
Ga0316620_122315193	3300033480	Soil	MSHLVEKPEKNPVATKTEERKWEIFENREARLRDQKHLEMAYEWLRNRGKTDLLKGAIES
Ga0316624_100012253	3300033486	Soil	MSNLAEKPEKIHITTEMDEKKWELFESREARLRDQKHLEMAYEWLRNRGKMMRLKVATEN
Ga0316624_101451723	3300033486	Soil	MGNPAEKFWENPITTEIKGKKWELFENTEARLRNQEHLQKAYEWLRNRGKIVPSECGIES
Ga0316624_108135252	3300033486	Soil	MGNLAEKSEKNPFTPEAEEKKCELFENREARLRDQKHLEMAYEWLRNRGKIVLLKSAIES
Ga0299912_108495732	3300033489	Soil	MSKLAEKCEKHPVTTETEEKKREFFENKEARLRDQEHLELAYEWLRSRGKTVLLKSATEN
Ga0316628_1002096653	3300033513	Soil	MGNPAEKFWENPITTEIKGKKWELFENMEARLRNQEHLQKAYEWLRNRGKIVPSECGIES
Ga0316628_1009431971	3300033513	Soil	MSNLAEKPEKIHITTEMDEKKWELFESREARLRDQKHLEMAYEWLRNRGKMMRLKVAT
Ga0316616_1035365341	3300033521	Soil	MSHLAEKSVQNPVMTEMEKKQREIFEDREASLRDQKHLEMAYEWLRNRGKTDLLKGAIES
Ga0334965_0049505_1281_1445	3300033991	Sediment	MSNLSEKFEKNSLITEIEEIEEKEWKLFENREAKLRDQKHLEMAYEWLRRRGKI
Ga0373900_065479_158_343	3300034078	Sediment Slurry	MSNLIEKFEKNPVATEIEEKERKLFENREAKLRNQRHLELAYEWLRSRGKIVLLKDGIES
Ga0326723_0119442_810_989	3300034090	Peat Soil	VSGLSNLIGKFEKNPVATEIEEKEWNLFENREAKLRDQTHLELAYEWLKSRRKIVLLKD
Ga0326723_0171376_1_135	3300034090	Peat Soil	MNNLADKSEKNAVTIEIEEKKWELFENREARLRDREHFELAYEWL
Ga0373902_136115_1_180	3300034099	Sediment Slurry	NPAEKFWENPVTTEIKGKKWEPFENTEARSRNQEHLEKAYEWLRNRGKIVLLECGIESL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085862

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences