Metagenome / Metatranscriptome Family F085917

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085917
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	72 residues
Representative Sequence	MIENIRTHPYTRAVCLETARLFEHRAAKHLVEAQDWADQGVANSALEFQTKARLAQQRANAWHLRAKNASD
Number of Associated Samples	80
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.56 %
% of genes near scaffold ends (potentially truncated)	27.03 %
% of genes from short scaffolds (< 2000 bps)	79.28 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.162 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (16.216 % of family members)
Environment Ontology (ENVO)	Unclassified (39.640 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.261 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.58% β-sheet: 0.00% Coil/Unstructured: 42.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d1nfva_	1nfv	0.89609
a.25.1.1: Ferritin	d3ka8a_	3ka8	0.88692
f.63.1.1: Claudin	d3jbre_	3jbr	0.88323
a.25.1.0: automated matches	d3b3ha_	3b3h	0.87067
a.23.1.1: HSC20 (HSCB), C-terminal oligomerisation domain	d1fpoa2	1fpo	0.8685

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF02735	Ku	16.22
PF12728	HTH_17	3.60
PF09609	Cas_GSU0054	0.90
PF01434	Peptidase_M41	0.90
PF00313	CSD	0.90
PF14319	Zn_Tnp_IS91	0.90
PF12576	DUF3754	0.90
PF07238	PilZ	0.90
PF00266	Aminotran_5	0.90
PF03466	LysR_substrate	0.90
PF00589	Phage_integrase	0.90
PF13358	DDE_3	0.90
PF09994	DUF2235	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	16.22
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
All Organisms	root	All Organisms	37.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
cellular organisms	root	All Organisms → cellular organisms	37.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.32 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.41 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.01 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.90 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.90 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.90 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.90 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.90 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Mesorhizobium sp. STM 4661	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. STM 4661	0.90 %
unclassified Paenibacillus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus	0.90 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.90 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Paenibacillus sp. SYP-B3998	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. SYP-B3998	0.90 %
Mesorhizobium sp. STM 4661	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. STM 4661	0.90 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.90 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10205621	Not Available	668	Open in IMG/M
3300002245\|JGIcombinedJ26739_100117963	All Organisms → cellular organisms → Bacteria	2497	Open in IMG/M
3300004080\|Ga0062385_10279658	Not Available	946	Open in IMG/M
3300004091\|Ga0062387_101777294	Not Available	503	Open in IMG/M
3300004092\|Ga0062389_101027995	Not Available	1009	Open in IMG/M
3300004092\|Ga0062389_101576766	Not Available	839	Open in IMG/M
3300005529\|Ga0070741_10001672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	65311	Open in IMG/M
3300005591\|Ga0070761_10574236	Not Available	700	Open in IMG/M
3300005921\|Ga0070766_10289116	Not Available	1050	Open in IMG/M
3300005947\|Ga0066794_10144503	Not Available	715	Open in IMG/M
3300006176\|Ga0070765_101747308	Not Available	584	Open in IMG/M
3300006638\|Ga0075522_10316378	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300006893\|Ga0073928_10063594	All Organisms → cellular organisms → Bacteria	3244	Open in IMG/M
3300009519\|Ga0116108_1092654	Not Available	919	Open in IMG/M
3300009521\|Ga0116222_1270764	Not Available	733	Open in IMG/M
3300009623\|Ga0116133_1024756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1485	Open in IMG/M
3300009640\|Ga0116126_1110232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	966	Open in IMG/M
3300009646\|Ga0116132_1137445	Not Available	746	Open in IMG/M
3300009672\|Ga0116215_1212577	Not Available	850	Open in IMG/M
3300009698\|Ga0116216_10797821	Not Available	566	Open in IMG/M
3300009824\|Ga0116219_10638546	Not Available	584	Open in IMG/M
3300010343\|Ga0074044_10105104	All Organisms → cellular organisms → Bacteria	1899	Open in IMG/M
3300010343\|Ga0074044_11031724	Not Available	539	Open in IMG/M
3300010371\|Ga0134125_10361922	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300010379\|Ga0136449_100262943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3190	Open in IMG/M
3300010379\|Ga0136449_101878032	Not Available	891	Open in IMG/M
3300010379\|Ga0136449_103418650	Not Available	607	Open in IMG/M
3300010379\|Ga0136449_103438978	Not Available	605	Open in IMG/M
3300010396\|Ga0134126_10800976	Not Available	1065	Open in IMG/M
3300012181\|Ga0153922_1029172	Not Available	1235	Open in IMG/M
3300014156\|Ga0181518_10149224	Not Available	1254	Open in IMG/M
3300014158\|Ga0181521_10110111	Not Available	1666	Open in IMG/M
3300014159\|Ga0181530_10028351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4060	Open in IMG/M
3300014164\|Ga0181532_10069141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	2269	Open in IMG/M
3300014164\|Ga0181532_10403586	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300014200\|Ga0181526_10151541	Not Available	1486	Open in IMG/M
3300014501\|Ga0182024_11421265	Not Available	797	Open in IMG/M
3300014657\|Ga0181522_10002926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	9649	Open in IMG/M
3300014657\|Ga0181522_10021959	All Organisms → cellular organisms → Bacteria → Proteobacteria	3488	Open in IMG/M
3300016750\|Ga0181505_10379651	Not Available	752	Open in IMG/M
3300017946\|Ga0187879_10131624	Not Available	1422	Open in IMG/M
3300017955\|Ga0187817_10207583	Not Available	1249	Open in IMG/M
3300017970\|Ga0187783_10451388	Not Available	933	Open in IMG/M
3300017972\|Ga0187781_10088043	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300017972\|Ga0187781_10671130	Not Available	749	Open in IMG/M
3300017975\|Ga0187782_10026178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4249	Open in IMG/M
3300017975\|Ga0187782_10613700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300018014\|Ga0187860_1025416	All Organisms → cellular organisms → Bacteria	3321	Open in IMG/M
3300018033\|Ga0187867_10779458	Not Available	520	Open in IMG/M
3300018037\|Ga0187883_10399704	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300018040\|Ga0187862_10593014	Not Available	657	Open in IMG/M
3300018044\|Ga0187890_10563727	Not Available	641	Open in IMG/M
3300018058\|Ga0187766_10837540	Not Available	645	Open in IMG/M
3300018062\|Ga0187784_10819959	Not Available	742	Open in IMG/M
3300018062\|Ga0187784_11503996	Not Available	533	Open in IMG/M
3300018062\|Ga0187784_11598751	Not Available	516	Open in IMG/M
3300018085\|Ga0187772_10759109	Not Available	698	Open in IMG/M
3300018085\|Ga0187772_10763987	Not Available	696	Open in IMG/M
3300020583\|Ga0210401_10293507	Not Available	1486	Open in IMG/M
3300021401\|Ga0210393_11408789	Not Available	557	Open in IMG/M
3300021420\|Ga0210394_10212205	Not Available	1689	Open in IMG/M
3300021474\|Ga0210390_10838042	Not Available	760	Open in IMG/M
3300021477\|Ga0210398_10320781	Not Available	1264	Open in IMG/M
3300021559\|Ga0210409_11577015	Not Available	533	Open in IMG/M
3300022557\|Ga0212123_10087509	Not Available	2598	Open in IMG/M
3300024271\|Ga0224564_1094564	Not Available	605	Open in IMG/M
3300025579\|Ga0207927_1053084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. STM 4661	1039	Open in IMG/M
3300025627\|Ga0208220_1025083	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300025633\|Ga0208480_1071513	Not Available	860	Open in IMG/M
3300025862\|Ga0209483_1282705	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300027648\|Ga0209420_1078565	Not Available	955	Open in IMG/M
3300027696\|Ga0208696_1228211	Not Available	583	Open in IMG/M
3300027854\|Ga0209517_10384042	Not Available	794	Open in IMG/M
3300027857\|Ga0209166_10080369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1843	Open in IMG/M
3300027895\|Ga0209624_10454469	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300028015\|Ga0265353_1011615	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300028906\|Ga0308309_11273581	Not Available	633	Open in IMG/M
3300030706\|Ga0310039_10259928	Not Available	667	Open in IMG/M
3300031057\|Ga0170834_110248662	Not Available	511	Open in IMG/M
3300031231\|Ga0170824_113391186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. SYP-B3998	2534	Open in IMG/M
3300031236\|Ga0302324_101085081	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300031525\|Ga0302326_12971084	Not Available	580	Open in IMG/M
3300031708\|Ga0310686_107533992	Not Available	780	Open in IMG/M
3300031708\|Ga0310686_108217578	Not Available	1208	Open in IMG/M
3300031708\|Ga0310686_108904692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1813	Open in IMG/M
3300031708\|Ga0310686_111441449	Not Available	892	Open in IMG/M
3300031708\|Ga0310686_113922991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300031715\|Ga0307476_10000495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30148	Open in IMG/M
3300031718\|Ga0307474_10722565	Not Available	787	Open in IMG/M
3300032160\|Ga0311301_10087353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6293	Open in IMG/M
3300032160\|Ga0311301_10131628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4643	Open in IMG/M
3300032160\|Ga0311301_10434487	Not Available	1987	Open in IMG/M
3300032160\|Ga0311301_11205845	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300032160\|Ga0311301_11236427	Not Available	952	Open in IMG/M
3300032160\|Ga0311301_11674547	Not Available	768	Open in IMG/M
3300032515\|Ga0348332_12494607	Not Available	636	Open in IMG/M
3300032770\|Ga0335085_10081186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4255	Open in IMG/M
3300032805\|Ga0335078_10071647	All Organisms → cellular organisms → Bacteria	5062	Open in IMG/M
3300032805\|Ga0335078_10077351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4853	Open in IMG/M
3300032805\|Ga0335078_10157194	All Organisms → cellular organisms → Bacteria	3207	Open in IMG/M
3300032805\|Ga0335078_10605202	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300032805\|Ga0335078_11126844	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300032828\|Ga0335080_11349997	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300032895\|Ga0335074_10460833	Not Available	1342	Open in IMG/M
3300032895\|Ga0335074_10970208	Not Available	756	Open in IMG/M
3300032895\|Ga0335074_11083698	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300032895\|Ga0335074_11084561	Not Available	693	Open in IMG/M
3300032896\|Ga0335075_10056887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5398	Open in IMG/M
3300032896\|Ga0335075_10985777	Not Available	759	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.10%
Host-Associated	Host-Associated	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.77%
Aquatic	Environmental → Aquatic	24.32%
Fungi	Host-Associated → Fungi	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.07%
Freshwater	Environmental → Aquatic → Freshwater	22.52%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.80%
Peat	Environmental → Terrestrial → Peat	1.80%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.90%
Mycelium	Host-Associated → Fungi → Mycelium	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	25.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.52%
Loam	Environmental → Terrestrial → Soil → Loam	6.31%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.90%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	23.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.31%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.50%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	16.22%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.41%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.50%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.70%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.90%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.90%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102056212	3300000567	Peatlands Soil	MIENIRTHPYTRAVCLETARMFEHRAAKHLVEAQDRADQGAADSALEFQTKARLAQQRANAWHLRAKNASN*
JGIcombinedJ26739_1001179633	3300002245	Forest Soil	MIENIRTHPYTRAVCLETARVFEHRAAKHLVEAQDRADQGAADSALEFQTKARLAQQRANAWHLRAKNASN*
Ga0062385_102796582	3300004080	Bog Forest Soil	VSLETARLFEQHAAKHLVEAQDRADQGAADSALEFQTKARLAQQRANAWHLRARSASN*
Ga0062387_1017772942	3300004091	Bog Forest Soil	MIENIRAHPYTRAVCLETARLFEHRAAKHLVEAQDRADQGVANSALEFQTKASTNYR*
Ga0062389_1010279952	3300004092	Bog Forest Soil	MIENIRTHSYSRAVCLETARLFEQHAAKHLVEAQDRADQGAVDSALEFQTKARLAQQRANAWHLRARTASS*
Ga0062389_1015767662	3300004092	Bog Forest Soil	VLLRPSEIPTHRHAVIENIRTHPYTRAVCLETARLFERRAAKDLVEAQRWADDGGSDRARELQCRARLAQERATAWHLRARNALTNHETREHAAS*
Ga0070741_100016722	3300005529	Surface Soil	MIESFRSHPYTRAVCIETARLFELEAAKDLVEAQCSADQGSAERARELWAKARLAQQRATAWHLRAKHASL*
Ga0070761_105742362	3300005591	Soil	MIENIRTHPYTRAVCLETARMFEHRAAKHLVEAQDRADQGAADSALEFQTNARLAQQRANAWHLRAKNASN*
Ga0070766_102891164	3300005921	Soil	MIENIRTHPYTLAVCLETARLFERRAAKDLLEAQRWADEGVSDRAREFQSKARLAQQRANAWHLRARHAPTDNEPRGHAAP*
Ga0066794_101445033	3300005947	Soil	MIENIRNHPYTCAVCLETARLFEHRAAKHLVEAQDWADQGVANSALEFQTRARLAQQRANAWHLRAKNASD*
Ga0070765_1017473082	3300006176	Soil	MIENIRTHPYTRAVCLETARLFERQAAKELVEAQRWSDEGISDRARELQSKARLAQERAKAWHLRARHASANNEPRGHAAP*
Ga0075522_103163782	3300006638	Arctic Peat Soil	MIENIRTHPYTRAVCLETARLFEHRAAKHLVEAQDWADQGVANSALEFQTKARLAQQRANAWHLRAKNGSNETARA*
Ga0073928_100635945	3300006893	Iron-Sulfur Acid Spring	MIENIRTHLYTRAVCLETARMFEHRAAKHLIEAQDRADQGAADSALEFQTKARLAQQRANAWHLRAKNASN*
Ga0116108_10926541	3300009519	Peatland	AAGRAMIENIRTHPYTRAVCLETARLFERQAANDLVEAQCSADEGALDRARELLAKARLAQQRANAWHLRARNASV*
Ga0116222_12707642	3300009521	Peatlands Soil	MIENIRTHPYTRAVCLETARMFEHRAAKQLVEAQDRADQGAADSALEFQTKARLAQQRANAWHLRAKNASN*
Ga0116133_10247562	3300009623	Peatland	MIENIRTHPYRRAVCLETARLFERQAAKDLVEAQCSADEGALDRARELQAKARLAQQRANAWHLRARNASV*
Ga0116126_11102322	3300009640	Peatland	MIENIRTHPYRRAVCLETARLFERQAAKDLVEAQCSADEGALDRARELQAKARLAQQRANAWHLRARNALV*
Ga0116132_10673212	3300009646	Peatland	MIENIRTHPYTRVVCLETARLFERQAAKDLVEAQCSADEGDALDRAREPQAKARLAQ
Ga0116132_11374451	3300009646	Peatland	YTRAVCLETARLFERQAAKDLVEAQCSADEGALDRARELLAKARLAQQRANAWHLRARNASV*
Ga0116215_12125772	3300009672	Peatlands Soil	LIATAAERAMIENFRTHPYTRAVCLETTRLFEQQAAKDLVEAQCSADEGSLDRARELQAKARLAQQRANAWHLRARNASV*
Ga0116216_107978212	3300009698	Peatlands Soil	AVCLETARLFEQHAAKHLVEAQDWADQGLANSALEFQTKAGLAQQRANAWHLRARNASN*
Ga0116219_106385462	3300009824	Peatlands Soil	MIENIRTHPYSRAVCLETARLFEQHAAKHLVEAQDRADQGAADSALEFQTKARLAQQR
Ga0074044_101051042	3300010343	Bog Forest Soil	MIENIRTYTSAVCLETARLFEHRAAKHLVEAQDWADQGVANSAQEFQTKARLAQQRANAWHLRAKNASN*
Ga0074044_110317241	3300010343	Bog Forest Soil	THSDKYRNCSAQTPHRPAMIENIRTHPYTRAVCLETARLFERRAAKNLVEAQRWADEGVSDRALEFQSKARLAQERASAWHLRARHAPNNNELRGRAAP*
Ga0134125_103619221	3300010371	Terrestrial Soil	MIESFRTHPYTRAVCLETARLFERQAAKDLVEAQCSADQGAADRARELQTAARVAQQRAKAWYLRAENARFETQSGKTGGSISHVGE*
Ga0136449_1002629435	3300010379	Peatlands Soil	MIENIRTHPYSRAVCLETARLFEQHAAKHLVEAQDWADQGLANSALEFQTKAGLAQQRANAWHLRARNASN*
Ga0136449_1018780322	3300010379	Peatlands Soil	MIENIRTHPYTRVVCLETARLFERQAAKDLVEAQCSADEGAVDRARELQAKARLAQQRANAWHLRARNASV*
Ga0136449_1034186502	3300010379	Peatlands Soil	HPYTRAVCLETARMFEHRAAKHLVEAQDRADQGAADSALEFQTKARLAQQRANAWHLRARNASN*
Ga0136449_1034389781	3300010379	Peatlands Soil	MIENIRTHPYTRAVCLETARLFEHRAAKHLVEAQDWADQCVANSALESQTKARLVQQRANAWRLRARTASN*
Ga0134126_100893402	3300010396	Terrestrial Soil	MIESFRTHPYTRAVCLETARLFERQAAKDLVEAQCSADQGAADRARELQTAARVA*
Ga0134126_108009762	3300010396	Terrestrial Soil	MIATAAAHAMIENMRSHPYTRAVCLETARLFEREAAKDLVEAQCSADEGAADRARELQAKARLSQQRANAWHLRARNASA*
Ga0153922_10291722	3300012181	Attine Ant Fungus Gardens	MIENIRTHPYTRAVCLETARMFEHRAAKHLIEAQDRADKGAADSALEFKTKARLAQQRANAWHLRAKNASN*
Ga0181518_101492242	3300014156	Bog	MIENIRTHPYRRAVCLETARLFERQAAKDLVEAQCSADEGALDRARELLAKARLAQQRANAWHLRARNASV*
Ga0181521_101101112	3300014158	Bog	MIENIKTHPYTRAVCLETARMFEHRAAKHLVEAQERADQGAADSALEFQTKARLAQQRANAWHLRAKNASN*
Ga0181530_100283512	3300014159	Bog	MIENIRTHPYTRAVCLETARMFEHRAAKHLIEAQDRADQGAADSALEFQTNARLAQQRANAWHLRAKNASN*
Ga0181532_100691412	3300014164	Bog	MIENIRTHPYTRAVCLETARMFEHRAAKHLVEAQERADQGAADSALEFQTKARLAQQRANAWHLRAKNASN*
Ga0181532_104035862	3300014164	Bog	MIENIRTHPYTCAVCLETARLFEHRAAKHLVESQDWADQGAADSALEFQTKARLAQQRA
Ga0181526_101515411	3300014200	Bog	IPTHAVCLETARLFEQRAAKHLLEAQDRVDQGVVNSALEFQTKARLAQQRAQAWHLRAKNAPN*
Ga0182024_114212651	3300014501	Permafrost	MIENIRAHPYTRAVCLETARLFEHRAAKHLVEAQDRADQGVANSALEFQTKARLAQQRANAWHLRAKNASN*
Ga0181522_100029268	3300014657	Bog	MIENIRTHPYTRAVCLETARLFERRAAKNLVEAQRWADEGVSDRAQEFQAKARLAQERANAWHLRARSALTNNEPRAHTAI*
Ga0181522_100219592	3300014657	Bog	MIENIRTHPYTRAVCLETAHLFERRAAKNLVEAQRWADEGISDRAREFQSKARIAQERANAWHLRARHAPNNNELRGRAAP*
Ga0181505_103796512	3300016750	Peatland	MIENIRTHPYTRAVCLETARLFEHRAAKHLVGAQDWADQGVANSALEFQTKARLAQQRANAWHLRAKNASN
Ga0187879_101316242	3300017946	Peatland	MIENIRTHPYRRAVCLETARLFERQAAKDLVEAQCSADEGALDRARELQAKARLAQQRANAWHLRARNASV
Ga0187817_102075832	3300017955	Freshwater Sediment	MIENIRTHPYTSAVCLETARLFEHRAAKHLVEAQDWADQGVANSALEFQTKARLAQQRANAWHLRARNASN
Ga0187783_104513882	3300017970	Tropical Peatland	MNENLRAHPYTRPVCLETARLFEKCAARHLVEAQAWADQGAVNSALEFQTKARLAQERASAWHLRAKNASY
Ga0187781_100880432	3300017972	Tropical Peatland	MIENFRTHPYTRAVCLEAARMFEQCAAKHLVEAQDWADRGVVDSALEFQTKARLAQERANAWHLRAKHAPT
Ga0187781_106711302	3300017972	Tropical Peatland	MIENFRTHPYTRTVCLETARLFEQRTAKHLVEAQDAADEGAADSAQQFQTKARLAQQRASAWHLRAKNASN
Ga0187782_100261783	3300017975	Tropical Peatland	MIENFRTHPYTRAVCLETARLFEQRAAKHLVDAQERADEGAANSALEFQTKARVAQQRARAWHLRARNASNSTPHV
Ga0187782_106137002	3300017975	Tropical Peatland	MMENIRTHPYTRAVCFQTARLFERRAAKNLVEAQRWADEGASDRAREFQTKARLAQERANAWHLRARNAPTHNKPRGHAAP
Ga0187860_10254163	3300018014	Peatland	MIENIRTHPYTRAVCLETARLFEGQAAKDLVEAQRSADEGALDRARELQAKARLAQQRANAWHLRARNASV
Ga0187867_107794582	3300018033	Peatland	CVGDAARRAMIEHIRTHPYTRAVCLETARLFEHRAAKHLVEAQDWADQGVANSALEFQTKARLAQQRANAWHLRARNASN
Ga0187883_103997041	3300018037	Peatland	MIENIRAHPYTRAVCLETARLFEHRAAKHLVEAQDWVDQGVANSALEFQTKARLAQQRANTWHLRARNASN
Ga0187862_105930142	3300018040	Peatland	MIENIRTHPYTSAVCLETARLFEHRAAKHLVEAQDWADQGVANSALEFQTKARLAQQRA
Ga0187890_105637272	3300018044	Peatland	MIENIRTHPYTRVVCLETVRLFERQAAKDLVEAQCSVDEGALDRARELQAKARLAQQ
Ga0187766_108375402	3300018058	Tropical Peatland	MIENIRTHPYTRAVCDQTARLFERQAAEDLVQAQHWADEGIADRAREFQAKARLAQERATAWHLRARNSPG
Ga0187784_108199591	3300018062	Tropical Peatland	MIENLRTHPYSATVCRETARLFERQAAKNLVEAQRLADEGVSDRGREFQAKARLAQERANAWRLRAKNASTSNEPRGHVAP
Ga0187784_115039961	3300018062	Tropical Peatland	MIENFRTHPYTRAVCLEAARMFEQCAAKHLVEAQDWADRGVVDSALEFQTKARLAQERANAWHLRARNASTVNEPRGQVAP
Ga0187784_115987511	3300018062	Tropical Peatland	MIESIRAHPYTRAVCLMTARLFERRAAEDLVQAQRWADQGASDRAREFQSKARLAQERASIWHLRARNALTNNEPRTGAW
Ga0187772_107591091	3300018085	Tropical Peatland	VRAMIENIRAHPYTRAVCLMTARLFERRAAKDLVQSQRWADEGVSDRAREFQSKARLAQERASTWRLRARNALTKDE
Ga0187772_107639871	3300018085	Tropical Peatland	MIENIRLHPYTHAVCLETARLFERRAAKNLVEAQRWADEGISDRAREFQAKARLAQERAKAWHLRARNTAPSNSRVGTRHH
Ga0210401_102935071	3300020583	Soil	IENIRTHPYTRAVCLETARMFEHRAAKHLIEAQDRADKGAADSALEFQTNARLAQQRANAWHLRAKNASN
Ga0210393_114087891	3300021401	Soil	MIENIRTHPYTRAVCLETARMFEHRAAKHLVEAQDRADQGAADSALEFQTKARLAQQRANAWHLRAKNASN
Ga0210394_102122053	3300021420	Soil	MIENIRTHPYTRGVCLETARMFEHRAAKHLIEAQDRADKGAADSALEFQTKARLAQQRANAWHLRAKNASN
Ga0210390_108380422	3300021474	Soil	MIENIRTHPYTRAVCLETARMFEHRAAKHLIEAQDRADQGAADSALEFQTKARLAQQRANAWHLRAKNASN
Ga0210398_103207813	3300021477	Soil	MIENIRTHPYTRAVCLETALLFEHRAAKHLVEAQDWADQGVVDSALELQTRARLAQQRANAWHLRAKNASN
Ga0210409_115770152	3300021559	Soil	MIENIRTHPYTRAVCLETARMFEHRAAKHLVEAQERADQGAADSALEFQTKARLAQQRANAWHLRAKNASN
Ga0212123_100875092	3300022557	Iron-Sulfur Acid Spring	MIENIRTHLYTRAVCLETARMFEHRAAKHLIEAQDRADQGAADSALEFQTKARLAQQRANAWHLRAKNASN
Ga0224564_10945641	3300024271	Soil	MIENIRTHPYTRAVCLETARMFEHRAAKHLVEAQDWADQGAADSALEFQTKARLAQQRANAWHLRAKNASD
Ga0207927_10530842	3300025579	Arctic Peat Soil	MIENIRNHPYTCAVCLETARLFEHRAAKHLVEAQDWADQGVANSALEFQTRARLAQQRANAWHLRAKNASD
Ga0208220_10250832	3300025627	Arctic Peat Soil	MIENIRTHPYTRAVCLETARLFEHRAAKHLVEAQDWADQGVANSALEFQTKARLAQQRANAWHLRAKNGSNETARA
Ga0208480_10715132	3300025633	Arctic Peat Soil	MIENIRNHPYTRAVCLETARLFEHRAAKHLVEAQAWADQGVANSALEFQTKARLAQQRANAWHLRAKNGSNETARA
Ga0209483_12827051	3300025862	Arctic Peat Soil	MIENIRTHPYTRAVCLETARLFEHRAAKHLVEAQDWADQGVANSALEFQTKARLAQQRANAWHLRAKNGSNETA
Ga0209420_10785652	3300027648	Forest Soil	MIENIRTHPYTRAVCLETARLFERRAAKDLVEAQHWADEGVSDRAQEFQTKARLAQERANAWHLRARNAAANNEPRGHAAP
Ga0208696_12282111	3300027696	Peatlands Soil	AMIENIRTHPYSRAVCLETAGLFEGQAAKDLVEAQCSADEGSLDRARELQAKARLAQQRANAWHLRARNASV
Ga0209517_103840422	3300027854	Peatlands Soil	MIENIRTHPYTRAVCLETARMFEHRAAEHLVEAQDWADQGVANSALEFQTKARLAQQRANAWHLRAKNASD
Ga0209166_100803691	3300027857	Surface Soil	ASFRTTLHRRAMIESFRTHPYTRAVCLETARLFERQAAKDLVEAQCSADQGAADRARELQTAARVAQQRAKAWHLRAKNAPV
Ga0209624_104544692	3300027895	Forest Soil	VIENIRTHPYTREVCLETARLFERRAAKNLVEAQRWADEGVSDRAREFQAKARLAQERASAW
Ga0265353_10116151	3300028015	Soil	MIENIRTHPYRRAVCLETARLFERQAAKDLVEAQCSADEGALDRARELQAKARLAQQRANAW
Ga0308309_112735812	3300028906	Soil	MIENIRTHPYTRAVCLETARLFERQAAKGLVEAQRWADEGVSDRAREFQSKARLAQERAKAWHLRARHASANNEPRGHAAP
Ga0310039_102599281	3300030706	Peatlands Soil	MIENIRTHPYTRAVCLETARMFEHRAAEHLVEAQDWADQGVANSALEFQTKARLAQQRANAWHLRARNASN
Ga0170834_1102486622	3300031057	Forest Soil	RAMIENIRTHPYTRAVCLETARMFEHHAAKHLVEAQDRADQGAADSALEFQTKARLAQQRANAWHLRAKNAPN
Ga0170824_1133911863	3300031231	Forest Soil	MIENIRTHPYTRTVCLETARMFEHRAAKHLVEAQDRADQGAADSALEFQTKARLAQQRANAWHLRAKNAPN
Ga0302324_1010850812	3300031236	Palsa	MIENIRTHPYTRAVCLETARLFERRAAKNLVEAQRWADEGVSDRAQEFQAKARLAQERANAWHLRARNSLTNNEPRAHTAT
Ga0302326_129710842	3300031525	Palsa	MIENFRAHPYTRSVCLETARLFEQCAAKSLVEAQDWADRGVTDSALQCQTKARLA
Ga0310686_1075339921	3300031708	Soil	MIENIRSHCYTRAVCLETARLFERRAANDLVQAQHWADEGVSDRAREFQSRARLAQERASAWHLRARNAFTNNEPREHATLKPKA
Ga0310686_1082175782	3300031708	Soil	MIENIRTHPYTSAVCLETARLFEHRAAKHLVEAQDWADQGVANSALELQTKARLAQQRANAWHLRAKNASN
Ga0310686_1089046922	3300031708	Soil	MIESFRAHPYIRGVCLETARLFERRAAKDLVAAQCRADEGVLGDAQRFQAKAKLAQQRASAWRLRAQNAPGGLTANEGTK
Ga0310686_1114414492	3300031708	Soil	MIENIRTHPYTRAVCLETARMFEHRAAKHLVEAQDWADQGAADSALEFQTKARLAQQRANAWHLRAKSASN
Ga0310686_1139229912	3300031708	Soil	MIENIRTHPYTRAVCLETARLFERRAAKNLVEAQRWADEGVSDRAQEFQARARLAQERASAWHLR
Ga0307476_1000049534	3300031715	Hardwood Forest Soil	MIENIRTHPYTRAVCLETARMFEHRAAKHLIEAQDRADKGAADSALEFKTKARLAQQRANAWHLRAKNASN
Ga0307474_107225651	3300031718	Hardwood Forest Soil	MIESFRTHPFTRAVCLETARLFEQRAAKDLVEAQCWADEGTAGEAQRLQTKARLAQQRA
Ga0311301_100873533	3300032160	Peatlands Soil	MIENIRTHPYSRAVCLETARLFEQRTAKHLVESQDRADQGAADSALEFQTKARLAQQRASAWHLRARNASN
Ga0311301_101316282	3300032160	Peatlands Soil	MIENIRTHPYSRAVCLETARLFEQHAAKHLVEAQDWADQGLANSALEFQTKAGLAQQRANAWHLRARNASN
Ga0311301_104344874	3300032160	Peatlands Soil	MIENIRTHPYTRVVCLETARLFGRQAAKDLVEAQCSADEGALDRARELQAKARLAQQRANAWHLRARNASV
Ga0311301_112058451	3300032160	Peatlands Soil	MIENIRTHPYTRAVCLETARMFEHRAAKHLVEAQDRADQGAADSALEFQTKARLAQQ
Ga0311301_112364272	3300032160	Peatlands Soil	MIENIRTHPYTRVVCLETARLFERQAAKDLVEAQCSADEGALDRARELQAKARLAQQRANAWHLRARNASV
Ga0311301_116745472	3300032160	Peatlands Soil	MIENIRTHPYTRAVCLETARLFEHRAAKHLVEAQDWADQGVANSALEFQTKARLAQQRANAWHLRAKNASD
Ga0348332_124946072	3300032515	Plant Litter	GGVARRAMIENIRTHPYTSAVCLETTRLFEHRAAKHLVEAQNWADQGVANSALELQTKARLAQQRANAWHLRAKNASN
Ga0335085_100811866	3300032770	Soil	MIENIRTHPYTSAVCLETARLFEHRAAKHLVEAQDWADQVVANSALKFQTKARLAQQRANAWHLRAKNASS
Ga0335078_100716472	3300032805	Soil	MIENIRNHPYTHAVCLETARLFERRAAKNLVAAQRWADEGLTGRAQEFQAKARLAQERANAWHLRARHAPPTTRREQRPSP
Ga0335078_100773514	3300032805	Soil	MIVNIRNHPYTCAVCLETARLFEHRAAKHLVKAQDWADQGAANSALEFQTRARLAQQRANAWHLRAKNASD
Ga0335078_101571944	3300032805	Soil	MMENIRTHPYTRAVCLETARLFERRAAKNLVEAQRWADEGVSDRAQEFQSKARLAQERANAWHFRARNALEPRAHTAT
Ga0335078_106052022	3300032805	Soil	MIENIRTHPYTSAVCLETARLFEHRAAKHLVEAQDWADQGVANSALKFQTKARLAQQRANAWHLRAKNASS
Ga0335078_111268442	3300032805	Soil	MIENIRSHPYTRAVCVQTARLFERQAAEALVEAQRWADEGIADRAREFQAKARLAQQRAN
Ga0335080_113499971	3300032828	Soil	MIENIRTHPYTSAVCLETARLFEHRAAKHLVEAQDWADQGVANSALKFQTKARLAQQRANAWQLRARNAAN
Ga0335074_104608333	3300032895	Soil	MIENIRTHPYTRTVCLETARLFEHRAAKYLVEAQDWADQSVANSALELQTKARLAQQRANAWHLRAKNASN
Ga0335074_109702081	3300032895	Soil	MIENIRTHPYTRAVCLETARLFEHRAAKHLVEAQDWADQGVATSALELQTKARLAQQRANAWHLRAKNASN
Ga0335074_110836981	3300032895	Soil	MIESFRTHPYTRAVCLETARLFERRAAKDLVAAQCRADEGVLGEARRFQARARLAQQRASAWRLRAQNARIGLTVVKAPIQT
Ga0335074_110845611	3300032895	Soil	MIETIRTHPYTRAVCLETARLLEHRAAKHLVEAQDWADQGVANSALQFQAKARLAQQRANAWHLRAKNASS
Ga0335075_100568875	3300032896	Soil	MIENIRTHPYTGAVCLETARLFEHRAAKHLVEAQDWADQGVANSALEFQTKARLAQQRANAWHLRARNASD
Ga0335075_109857771	3300032896	Soil	IRNHPYTRAVCLETARLFEQRAAKHLVEAQDWADQGAGDSALEFQTKARLAQQRADAWHLRAKSASN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085917

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences