Metagenome Family F085973

Basic Information
Family ID	F085973
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	120 residues
Representative Sequence	VSAVATSAAVRALEALLGMLADAGIAASRDAGAFYPQPVGVLVGLPTLTGRLLAGRTFTVPVLVVSGDPFNSELAVDRAYALADDVALALRTENYRPSSWRSSVNAEPLPAIELAVTVTV
Number of Associated Samples	66
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	61.29 %
% of genes near scaffold ends (potentially truncated)	2.70 %
% of genes from short scaffolds (< 2000 bps)	12.61 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Most Common Taxonomy
Group	Unclassified (86.486 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (19.820 % of family members)
Environment Ontology (ENVO)	Unclassified (40.541 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.748 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 22.30% Coil/Unstructured: 52.70%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.323.1.2: Phage tail protein-like	d2gjva1	2gjv	0.7
d.323.1.1: Phage tail protein-like	d3fz2a1	3fz2	0.63
d.90.1.1: FMN-dependent nitroreductase-like	d1noxa_	1nox	0.56
d.90.1.1: FMN-dependent nitroreductase-like	d1zcha1	1zch	0.56
d.90.1.0: FMN-dependent nitroreductase-like	d4qlxa_	4qlx	0.56

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF04860	Phage_portal	8.11
PF13408	Zn_ribbon_recom	3.60
PF00196	GerE	3.60
PF06737	Transglycosylas	2.70
PF04586	Peptidase_S78	1.80

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	1.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.49 %
All Organisms	root	All Organisms	13.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.49 %
cellular organisms	root	All Organisms → cellular organisms	9.91 %
Viruses	superkingdom	All Organisms → Viruses	3.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.49 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.91 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.49 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.41 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.49 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.41 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.49 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.41 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.60 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.49 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.49 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.60 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.49 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.60 %
Aeromicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_11492782	Not Available	661	Open in IMG/M
3300004633\|Ga0066395_10002749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6076	Open in IMG/M
3300004633\|Ga0066395_10009649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3532	Open in IMG/M
3300005439\|Ga0070711_100216167	Not Available	1487	Open in IMG/M
3300005526\|Ga0073909_10091924	Not Available	1184	Open in IMG/M
3300005764\|Ga0066903_100003396	All Organisms → cellular organisms → Bacteria	12994	Open in IMG/M
3300005764\|Ga0066903_100009004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	9321	Open in IMG/M
3300005764\|Ga0066903_100052448	Not Available	4988	Open in IMG/M
3300005764\|Ga0066903_100877586	Not Available	1619	Open in IMG/M
3300005764\|Ga0066903_100922576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1584	Open in IMG/M
3300005764\|Ga0066903_103380234	Not Available	861	Open in IMG/M
3300005937\|Ga0081455_10091700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2460	Open in IMG/M
3300006854\|Ga0075425_100713975	Not Available	1151	Open in IMG/M
3300010362\|Ga0126377_10023453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5115	Open in IMG/M
3300010362\|Ga0126377_10655608	Not Available	1099	Open in IMG/M
3300010362\|Ga0126377_11263100	Not Available	810	Open in IMG/M
3300010366\|Ga0126379_10001686	All Organisms → cellular organisms → Bacteria	13642	Open in IMG/M
3300010366\|Ga0126379_10004448	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9248	Open in IMG/M
3300010376\|Ga0126381_100033206	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6179	Open in IMG/M
3300010376\|Ga0126381_100111309	Not Available	3522	Open in IMG/M
3300010398\|Ga0126383_10412108	Not Available	1391	Open in IMG/M
3300015371\|Ga0132258_10020272	All Organisms → cellular organisms → Bacteria	14483	Open in IMG/M
3300015371\|Ga0132258_10127513	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6061	Open in IMG/M
3300015371\|Ga0132258_11049187	Not Available	2060	Open in IMG/M
3300015371\|Ga0132258_11957877	Not Available	1475	Open in IMG/M
3300015371\|Ga0132258_13196318	Not Available	1130	Open in IMG/M
3300018481\|Ga0190271_10001834	All Organisms → cellular organisms → Bacteria	12433	Open in IMG/M
3300020009\|Ga0193740_1012842	Not Available	1341	Open in IMG/M
3300027874\|Ga0209465_10004470	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6079	Open in IMG/M
3300027874\|Ga0209465_10068305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1720	Open in IMG/M
3300027907\|Ga0207428_10044802	Not Available	3566	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.68%
Host-Associated	Host-Associated	24.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.68%
Plants	Host-Associated → Plants	24.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.35%
Loam	Environmental → Terrestrial → Soil → Loam	24.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	18.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.12%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	9.01%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.60%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020009	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_01938950	2170459003	Grass Soil	MRGVEALLGMLEDAGIEATRDPGAFYPQPTAVLVGLPTLEGRGLATRTFTVPVLVVSGDPLNTELAVDRLYLLADEAAAALATDNYRPSSYRSSVNAEPLPAIELSVTVTVSEGDLQLTD
F62_10335790	2170459010	Grass Soil	PQPLGVLVGLPTLLKRGLASSTFEVPVLVVSGDPLNSEPAVDAIYALADAVAGALSTAGYRPSSYRSSSNAEPLPAVELSVFVTVQEEA
N55_03024290	2189573000	Grass Soil	MAATLSSIASRAITALVSLLADAGIEATRDXGAFYPQPVGVLVGLPTLAGRGLATRTFTIPVQVVSGDPLNSELAVDRLYALADDVALALRSDTYSPSSWRSTANAEPLPTVEVVATVTVTE
INPhiseqgaiiFebDRAFT_1041174832	3300000364	Soil	VSSPPTQPATRAIEAVLDELEVAGIAASRDAGAFYPQPIGTLVGLPELTRRTHGARVYSIPVLVVSGDPLNSELTVDRLYALVDDVARVLSAEAYRVSSWRSSVNAEPLPAIEILAVVTVTETAPLALYEQEASHAAD*
AP72_2010_repI_A100DRAFT_10214652	3300000837	Forest Soil	MSATATSAGTRAIEALLALLEDAGIEATRDAGAFYPQPVGVLVGLPTLIGRTQGGRNFTIPVLVVSGDPFNAELPVDRALALADDVALALKVANYRPSSYRSSSNAEPLPAFELDVTVYVPEEVSAP*
JGI10213J12805_114927821	3300000858	Soil	MSTPATTSAAARAIVHLLELLAEAGIEASRDAGAFYPQPAGVLVGLPTLTTRGVFTRVFTIPVLVVSGDPLNSEPAVDRIYALADDVALALATDNYRPSSWRSSVNAEPLPALELAVTV
Ga0062595_1021861461	3300004479	Soil	SAGGNVSDTAALGVSASTAIEAVLSMLTDAGIAATRDPGAFYPQPVGVLVGLPTLTGRGLSFRTFEIPVQVVSGDPLNTALAVDRVYALADDIALVLSASGYRPSSWRSSVNAEPLPAVVIDVTVTVSETGG*
Ga0066395_100027495	3300004633	Tropical Forest Soil	VSATPTKPLAVLAIDETLSMLAAASIEATRDAGAFYPQPIGVLVGLPTLLRRLQGGRVYSIPVLIVSGDPLNAEGSVDRIYAVADDVALVLRADAYRPSSYRSSSNAEPLPAIELLVTVSISEQEAPL*
Ga0066395_100096493	3300004633	Tropical Forest Soil	MSVPVVTIGTAARRDLAARLEAAGIEASTDAGAFYPTPIGVLIGLPAYVARGLASRTFEVPVLVVSGDALNSELVVDRVLELADAVALALKTDNYAPSSWRSSSNAEPLPAFELTVTVTIEEEA*
Ga0066395_103611271	3300004633	Tropical Forest Soil	PAARRLAPAGGDVSSPAARAIEAVLGELQGAGIEASRDAGSFYPQPVGALVTLPELVRRTHGARVFELPVLVVSGDPLNSELAVDRLYALVDDVALTLSADAYRVSSWRSGVNAEPLPAVEVDAVVTVTETAPMALVEQEA*
Ga0066395_110030961	3300004633	Tropical Forest Soil	MTAATVAIEDVLARLTAAGITATRDAGSFYPQPTGVLVGLPELTARGLGTWTFTVPVSVVSGDPLSGELTVDRLYELAEDVAAALSTNAYRPTSYRTNANAEPLPALELGVTVTAQEA*
Ga0066388_1018321401	3300005332	Tropical Forest Soil	VSVAWTDQSGAVAAIAAVISELQAAGIDATRDPGAFYPQPVGVLVGLPTLAERGLASSTFSVPILIVSGDPLNSEDVVDRLYALADDAARAVRTDQYRPSSWAGNVNAEPLPAVEMAATVTLADIGGSL*
Ga0070682_1002672341	3300005337	Corn Rhizosphere	MSTPATLNAATRAIEELVARLEEAGVSATRDAGAFFPQPVGVLVGLPTLVSRGLAARTFTIRVLVVSGDPLNTPLAVDRVYALADDVAYALATDAYRASSWRSSVNAEPLPAVELTVTVTVTETQEV*
Ga0070711_1002161673	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LTTPTVSSIAARALDALVALLADAGIDASRDAGAFYPQPVGVLVGLPTLTSRGHGSRTFTVPVFVVSGDPFNSEAAVNRALALADDVALATKTDNYRPSAYRGGVNSEPLPCFELSVVVTTPEEVSP*
Ga0070694_1001978411	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	IEAALDAGAFYPQPIGVLVGLPTLVKANLSARVFTIPVLVVSGDPVSAPLVVDRLYALADDVALAVRTLAYRPSSWSGGPNAEPLPAVELTVTVTVPETGG*
Ga0073909_100919242	3300005526	Surface Soil	MTAPPTTPAAVRAIDATLELLAAASIEATRDAGAFYPQPIGVLVGLPALVGRGQAARTFELSVLVVSGDPLNAELAVDRLYSVADDVATVLRTDRYRPSSWRSSSNAEPLPALELLVTVTVTETEV*
Ga0066905_1000418262	3300005713	Tropical Forest Soil	VSVVAPPAAVRVIEQVVDELLAAGIAATRDAGAFYPQPTGVLVGLPSLVARGLYSRTFEVPVLVVSGDPVNAVLAVDRLYELGEQVALELATAAYRVSSWRSSVNAEPLPALELTVTVTTEEEP*
Ga0066905_1006353991	3300005713	Tropical Forest Soil	SVPATKPLAVLAIDETLNLLAAASIEATRDAGAFYPQPIGVLVGLPTLVRRLHAGRTYSIPVLVVSGDPLSDELVVDRILAVADAVALALTTNNYAPSSWRSSSNAEPLPALELTVTVTIEEEA*
Ga0068866_105228412	3300005718	Miscanthus Rhizosphere	MSTPATLNAATRAIEELVARLEEAGFSATRDAGAFFPQPVGVLVGLPTLVSRGLAARTFTIRVLVVSGDPLNTPLAVDRVYALADDVAYALATDAYRASSWRSSVNAEPLPAVELTVTVTVTETQEV*
Ga0066903_1000024046	3300005764	Tropical Forest Soil	VTVATGIASRARAAVAAELELAGITAVTDSGAGHPAPAWVLVGLPSLTARGLASSSFSVPVYVISGDPLNDEHAVDRLYALADDTALALSADQYRPTSWQGGLNAEPLPAIELAATVTLTYETEA*
Ga0066903_10000339617	3300005764	Tropical Forest Soil	MSVSVSSPAARAIAATLELLADAGIAATRDAGAFYPQPVGTLVGLPTLSSRGLQSRTFTIPVYVVSGDPLNSELAVDRLYALADDVALALRTDAYRPSAWSSTVNAEPLPALELIVTVTETEV*
Ga0066903_10000526218	3300005764	Tropical Forest Soil	MSAFGTETGTGAGAAIAATLAQLQANGIEATRDAGAFYPQPIGVLVGLPTLVRRLAAGATYSVPVLVVSGDPLNEELAVDRLYALADDCARAVRADQYRPGSYQTSANAEPLPAIELAAIVSLSET*
Ga0066903_10000900412	3300005764	Tropical Forest Soil	MAPAGGRVNATLTSAAGRARARLLAELEAAGIEATTDAGAFYPQPVGVLVGLPTYTGRGQASRSFEVPVYVVSGDPLNSELAVDRLYALADDVALACRADRYRPTSWRGSSNAEPLPSIDVVAVLTVPDSEEA*
Ga0066903_1000524485	3300005764	Tropical Forest Soil	VSSPAARAIEAVLGELQGAGIEASRDAGSFYPQPVGALVTLPELVRRTHGARVFELPVLVVSGDPLNSELAVDRLYALVDDVALTLSADAYRVSSWRSGVNAEPLPAVEVVAVVTVTETAPMALVEQEA*
Ga0066903_1008775863	3300005764	Tropical Forest Soil	VSTPATSSAAIRAIDALLELLASSGIEATRDAGAFYPQPVGVLVGLPTLTGRLLAAGGATFTVPVLVVSGDPFNAELAVDRAYALADDVAIALRTDSYRPSSWRSSVNAEPLPAIELTVTVTTQEEASP*
Ga0066903_1009225763	3300005764	Tropical Forest Soil	MSATVTSEASAARRRLVAMLEAAGIEASSDAGAFYPQPVGVLVGLPALLRRGLGSRTFEVPVLVVSGDPLNSELAVDRLYALADDVVGALKADRYAPSSWRSSSNAEPLPAIELPVTVTVEQEA*
Ga0066903_1013096811	3300005764	Tropical Forest Soil	AGIEASTDAGAFYPQPIGVLVGLPSLTGRTLSARTFAVPVLVVSGDPLSSPLAVDRIYALADDVAYVLAEAAYAPSSWRSTANAEPLPAIELSVTVTVPESEA*
Ga0066903_1020454331	3300005764	Tropical Forest Soil	GGRMTAPPALTGALAAMQAVLDLLASAGITATDDPGAFYPQPVGVLVCPPARTGRGLRSETFSVPVLVVSGDPLNHSLPIARLYALADDAADALAIDQYRPSSWAGNVNAEPLPAVELAATVTLAEEA*
Ga0066903_1033802343	3300005764	Tropical Forest Soil	VSAVATSAAVRALEALLGMLADAGIAASRDAGAFYPQPVGVLVGLPTLTGRLLAGRTFTVPVLVVSGDPFNSELAVDRAYALADDVALALRTENYRPSSWRSSVNAEPLPAIELAVTVTV
Ga0066903_1083419762	3300005764	Tropical Forest Soil	DASGRLEAARSDLMVVVEAHPATRALQAVLDELNAAGIDASRDPGAFYPQPIGVLVGLPALSRRTQGGRVYAIAVLVVSGDPLNAIDAVDRLFSLADDVALALRVEAYSVSSWRSSVNAEPLPAVELTATVSITETQEVP*
Ga0066903_1086790142	3300005764	Tropical Forest Soil	VSVATVTHATRARRAIAEGLAGYGIEASLDAGAFFPQPVGVLVGLPSMSSRGLGSRTFEVPILVVSGDPLNSELAVDRLYALADDVAGAIRHSRYRATSWRGGVNAEPLPAIELV
Ga0068870_111255351	3300005840	Miscanthus Rhizosphere	QPRRNHAATPLEAPDRRMSTPATLNVATRAIEELVARLEEAGVSATRDAGAFFPQPVGVLVGLPTLVSRGLAARTFTIRVLVVSGDPLNTPLAVDRVYALADDVAYALATDAYRASSWRSSVNAEPLPAVELTVTVTVTETQEV*
Ga0081455_1000501414	3300005937	Tabebuia Heterophylla Rhizosphere	VTAPPYTETSGAVAAMRATVDLLRDAGIDAITDVGAFFPAPIGVLVTLPTLTNRGQRSNTFSVPILIVSGDPLNTEMAVGRIYAIADDAARTVRTAEYRPGSWAGNINAEPLPAIEMAATVTIRTEEP*
Ga0081455_100917003	3300005937	Tabebuia Heterophylla Rhizosphere	MSVMAASAATRALQGVLDLLEQAGITATRDAGAFYPQPVGVLVGLPTLTKRGLASHTFTVPVLVVSGDPLNDELPVDRVYALADDVAAVLAIDQYRPSSWAGGVNAEPLPAVELAATVTVTADPQGGI*
Ga0070712_1017116872	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSSTTATAAGSRAIERLLELLADAGVEATRDPGSFFPQPVGVLVGLPTLAGRGQATRTFTIPVLVVSGDPFNAPLHVDRALALADDVALVLRTENYRPSSYRSSSNAEPLPAFELDVTVTVPEEVSAP*
Ga0075433_101309911	3300006852	Populus Rhizosphere	RAFLRPGGASAVSTATAHPATRAVGAVLDELAGAGIEATRDPGAFYPQPVGVLVGLPELSKRTHGARVFAIPVLVVSGDPLNTELAVDRLYALTDDVALCLSIEAYRVSSWRSSVNAEPLPAIELAAVVSVTETAPLALIESEET*
Ga0075425_1007139753	3300006854	Populus Rhizosphere	VTTPVATGIASRAIDAVVELLADAGILATRDAGAVYPQPTAVLVGLPTLLRRGLASATFSIPVTVISGDPLNTELAVDRVYALADAAAAAIATDQYRPTSWQGGVNAEPLPAVELAAIVTLTTIGGLLS*
Ga0111539_1000987317	3300009094	Populus Rhizosphere	VSTATAHPATRAVGAVLDELAGAGIEATRDPGAFYPQPVGVLVGLPELSKRTHGARVFAIPVLVVSGDPLNTELAVDRLYALTDDVALCLSIEAYRVSSWRSSVNAEPLPAIELAAVVSVTETAPLALIESEET*
Ga0111539_116715142	3300009094	Populus Rhizosphere	EPANFYPQPAGVLVGLPALVRRTQAARVFEVTVLVVSGDPLNVALAVDRLYALADDVALALAVDSYRVSNYRSSVNAEPLPALELTATLTVTETETEAP*
Ga0111538_1000766919	3300009156	Populus Rhizosphere	VSTATAHPATRAVGAVLDELAGAGIEATRDPGAFYPQPVGVLVGLPELSKRTHGARVFAIPVLVVSGDPLNSELAVDRLYALTDDVALCLSIEAYRVSSWRSSVNAEPLPAIELAAVVSVTETAPLALIESEET*
Ga0111538_122120242	3300009156	Populus Rhizosphere	VSTNGTAATHPATRALEALLAELVAAGIPATREPANFYPQPAGVLVGLPALVRRTQAARVFEVTVLVVSGDPLNVALAVDRLYALADDVALALAVDSYRVSNYRSSVNAEPLPALELTATLTVTETETEAP*
Ga0126370_107720591	3300010358	Tropical Forest Soil	LAPAGGRVSVATVTHATRARRAIAEGLAGYGIEASLDAGAFFPQPVGVLVGLPSMSSRGLGSRTFEVPILVVSGDPLNSELAVDRLYALADDVAGAIRHSRYRATSWRGGVNAEPLPAIELVYTVTVTESEA*
Ga0126377_100234534	3300010362	Tropical Forest Soil	MSVVQATEGTLARRNLADRLAAVGIEASTDAGSFYPTPLGVLIGLPSLVGRGLASRTFEVPVLVVSGDPLNDELVVDRVLVVADAVALALSTNSYAPSSWRSSSNAEPLPAFELTVTVTIEEEA*
Ga0126377_106556082	3300010362	Tropical Forest Soil	MAPAGGDVSTTAKHPATRALDAILAALDDAGIVATRDAGSFYPQPAGILVGLPELTRRTAGARIFEIPVLVVSGDPLNSELAVDRIYALADDVALALAIDAYSISSWRSSVNAEPLPAIELAAVVTVTETALALIEQEGS*
Ga0126377_112631001	3300010362	Tropical Forest Soil	MSVPVVTIATLARRDLAERLAAAGIEASIDAGAFYPTPLGVLIGLPALVGRGLASRTFEVPVLVVSGDPLNSELVVDRVLELADAVAGALTTNNYAPSSWRGSNM
Ga0126377_113053382	3300010362	Tropical Forest Soil	MSTMATSAGSQAIAAVVEALETAGITATRDAGAFYPQPVGVLVRLPTLTRRGLSSFTFTVPILVVSGDPLNDELPVDRVYALADDVALALAIDQYRPSSWAGSPNAEPLPAVELAATVTITTGGAP*
Ga0126379_1000168618	3300010366	Tropical Forest Soil	VAPPGGRVSATSTSSPAARARTWIADRLEAAGIAATLDAGAFFPQPNGVIVGLPTLTARGLGSRSYSIPVDVVSGDPLNSELAVDRLYALADDVALACHCDAYRPTSWRGGVNAEPLPSIQLTATVTVPEEVPAS*
Ga0126379_100044487	3300010366	Tropical Forest Soil	LAPSGGRVSVVVSSPAIRARDALVTLLADAGIAADRDAGAFYPQPIGVLVGLPALTGRTLAGMTFELPVLVVSGDPLNKPLAEDRLYALADDVAVAVRTDHYAPSSWRGSVNAEPLPALELLVTLTITLEA*
Ga0126379_103910154	3300010366	Tropical Forest Soil	MSSPATITAAVRAIELVLEQLADAGIEATRDAGAFYPQPAGVLVGLPSLVGRGLYARTFELPVLVVSGDPIVGASGDLVVDRLYALAEEAALALGEDSYRVTSYRSSANAEPLPAIELLVTVTVTETEV*
Ga0126379_112407232	3300010366	Tropical Forest Soil	MTTPGTVAAAVRAIELALEQLADAGIEATRDAGAFYPQPTGVLVGLPALVGRGLYARTFELPVLIVSGDPLNAELNVNRLYELAEAAALALGEDSYTVSSYRSSSNAEPLPALELLVTVTVTETEV*
Ga0126379_138057072	3300010366	Tropical Forest Soil	MTAATVAIEDVLARLTAAGITATRDAGSFYPQPTGVLVGLPELTARGLGTWTFTVPVSVVSGDPLSGELTVDRLYELAEDVAAALSTNAYRPTSYRTNANA
Ga0126381_1000332065	3300010376	Tropical Forest Soil	VSTTVRPPAVRAIDATVELLQAAGIPATRDPGAFYPQPVGVLVGLPTLLRRTQGGRVYTIPVLVVSGDPLNDELPVDRLYALADDVALELQVNTYRPASYQSGVNAEPLPAIELVATASVTEQEEI*
Ga0126381_1001113093	3300010376	Tropical Forest Soil	VSSIVLSAGSRAAEAVLEELLEAGIEATRDAGAFFPQPAGVLVGLPTLAGRGQASRTFTVPVLVVSGDPFNATDRVDRILALADQAALELGTDNYRPTSFRSSVNAEPLPAYELVVTVTVTEEV*
Ga0126381_1008442522	3300010376	Tropical Forest Soil	LSSSVAASAGTRAIERCLELLADAGVEEATRDAGAFYPQPVGVLVGLPTLIGRTQGGRRFRLPILVVSGDPFNTPLAVDRALALADDVAFAVHVNNYRPSSWRSSSNAEPLPAFELDVEVLVPEEVSAP*
Ga0126381_1011069313	3300010376	Tropical Forest Soil	ELVLEQLADAGIEATRDAGAFYPQPTGVLVGLPALVGRGLYARTFELPVLIVSGDPLNAELNVNRLYELAEAAALALGEDSYTVSSYRSSSNAEPLPALELLVTVTVTETEV*
Ga0126381_1020691282	3300010376	Tropical Forest Soil	MDRAWQKVSAASRARLELLAELEAAGVEATGDAGAFFPQPLGVLVGLPTLTGRTLAGRTFVIPVTVVSGDPLNSEQAVDRAYALADEIAGVLSTSNYRPSSYRSSTNAEPLPALELAVTVTVSEEVS*
Ga0126383_104121083	3300010398	Tropical Forest Soil	MTTPGTVTAAVRAIELALEQLAEAGIEATRDAGAFYPQPTGVLVGLPALVGRGLYARTFELPVLVVSGDPLNAELNVNRLYELAEAAALALGEDSYTVSSYRSSSNAEPLPALELLVTVTVTETEV*
Ga0126383_126962522	3300010398	Tropical Forest Soil	EATRDAGAFYPQPAGVLVGLPSLVGRGLYARTFELPVLVVSGDPIVGASGDLVVDRLYALAEEAALALGEDSYRVTSYRSSANAEPLPAIELLVTVTVTETEV*
Ga0126375_100005801	3300012948	Tropical Forest Soil	LAERLAAAGIEASTDAGAFYPTPLGVLIGLPSLVGRGLASRTFEVPVLVVSGDPLSDELVVDRILAVADAVALALTTNNYAPSSWRSSSNAEPLPALELTVTVTIEEEA*
Ga0126375_104764952	3300012948	Tropical Forest Soil	MSVTPTKPLAIVAVDETLALLAAASIEATRDAGAFYPQPIGVLVGLPTLVRRLQAGRVYSIPVLVVSGDPLNAEGSVDRLYSIADDVALVLRADAYRPSSYRSSANAEPLPAIEVLVTVSVSESEV*
Ga0126369_114398801	3300012971	Tropical Forest Soil	ASSDMSVPVVTIGTAARRDLAARLEAAGIEASTDAGAFYPTPIGVLIGLPAYVARGLASRTFEVPVLVVSGDALNSELVVDRVLELADAVALALKTDNYAPSSWRSSSNAEPLPAFELTVTVTIEEEA*
Ga0126369_124335362	3300012971	Tropical Forest Soil	GVLVGLPTLTGRLLDGARFVVPVSVVSGDPLNSEETVDRIYALADEVAAVLSTPAYRPASYRSTANAEPLPAIELAVIVTTEEVS*
Ga0132258_100202725	3300015371	Arabidopsis Rhizosphere	VAPPGGDVSTAVVTAAVRAIEATLAALDDAGITATRDPGAFYPQPVGVLVGLPELVSRGVGLRTFTVPVHVVSGDPFNATPPVDRAFALADEVALALHTDTYRPSSYRSSVNAEPLPAITLDVTVSVPELEEA*
Ga0132258_101275136	3300015371	Arabidopsis Rhizosphere	LAAPDDRLMATAVTHPATRAINAALALLEAASIDATRDPGSFYPQPAGVLVGLPALVKRGQASRVYELSVLVVSGDPLNDELAVDRLYALADDAALALACASYQVSSYRSSVNAEPLPALEMTATVSVTESEV*
Ga0132258_102327168	3300015371	Arabidopsis Rhizosphere	APAGVGMSTMAATAASRAIQGVLDVLAAAGITATRDPGAFYPQPVGVLVGLPTLTRRGLASHTFTIPVLVVSGDPLNDEAPVDRVYALADEVAFVLAIDQYRPSTWAGGVNAEPLAAVELNATVTVTTVDPNPNGGF*
Ga0132258_110491873	3300015371	Arabidopsis Rhizosphere	MSTIAASAASRAIEGVLDELGAAGIDATRDPGAFYPQPVSVLVGLPTLTRRGLASHTFSIPVLVVSGDPLNDELPVDRVYALADDVALALAIDQYRPSSWAGGVNAEPLPAVELTATVTVTTADPTGGT*
Ga0132258_119578773	3300015371	Arabidopsis Rhizosphere	MSAVSLTPATRAIEETLDVLEEAGIAATRDAGAFYPQPAGVLVGLPTLESRGLAVRTYTIPVLVVSGDPLNSELAVDRLYALADDVALALRTDNFRPSSYRSSVNAEPLPALELAVTVTTTETEA*
Ga0132258_126023511	3300015371	Arabidopsis Rhizosphere	RVASAGGTVSVAVVAPATRALDTVLEALEDAGIEATRDPGAFYPQPVGVLVALPALVRRLQAARTYELSVLVVSGDPLNSTPAVDRVYALADDVALALAVDSYRPSNWRSSVNAEPLPAVELTAVVTVTETVDTGGP*
Ga0132258_131963182	3300015371	Arabidopsis Rhizosphere	MSTMAASAASRAIEGVLDVLAAAGITATRDPGAFYPQPVGVLVGLPTLSRRGLASHTFSIPVLVVSGDPLNDELPVDRVYALADDVALALAIDQYRPSSWAGGVNAEPLPAVELTATVTVTTADPTGGT*
Ga0132256_1008256013	3300015372	Arabidopsis Rhizosphere	ASAASRAIEGVLDELGAAGIDATRDPGAFYPQPVSVLVGLPTLTRRGLASHTFSIPVLVVSGDPLNDELPVDRVYALADDVALALAIDQYRPSSWAGGVNAEPLPAVELTATVTVTTADPTGGT*
Ga0132256_1027317891	3300015372	Arabidopsis Rhizosphere	MSTMAASAASRAIEGVLDVLAAAGITATRDPGAFYPQPVGVLVGLPTLSRRGLASHTFSIPVLVVSGDPLNDELPVDRVYALADDVALALAIDQYRPSSWAGGVNAEPLPAVELTATVTVTTA
Ga0132257_1000747233	3300015373	Arabidopsis Rhizosphere	VEAPDDRLMATAVTHPATRAINAALALLEAASIDATRDPGSFYPQPAGVLVGLPALVKRGQASRVYELSVLVVSGDPLNDELAVDRLYALADDAALALACASYQVSSYRSSVNAEPLPALEMTATVSVTESEV*
Ga0132257_1001628971	3300015373	Arabidopsis Rhizosphere	MSTVAATSAATRALEALLDLLAAAGVTATRDPGAFYPQPVGVLVGLPTLTRRGLASHTFTIPVLVVAGDPLNDEGPVDRVYALADEVAFVLAIDQYRPSTWAG
Ga0132257_1013821432	3300015373	Arabidopsis Rhizosphere	AGVGMSTIAASAASRAIEGVLDELGAAGIDATRDPGAFYPQPVSVLVGLPTLTRRGLASHTFSIPVLVVSGDPLNDELPVDRVYALADDVALALAIDQYRPSSWAGGVNAEPLPAVELTATVTVTTADPTGGT*
Ga0182035_108597842	3300016341	Soil	EAGIPAVLDAGAFYPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0190274_1000263811	3300018476	Soil	VRRPIELGVAAEAPANRARLALVSQLEAAGIYAATDAGAFYPQPFGVLVGLPSLVGRTLSARRFTIPVLVVSGDPLNTPHTVDGLYALADDVANVIREISYRPSTFRGSANAEPLPAIELEANVTVTETEET
Ga0190271_1000183417	3300018481	Soil	VSVTEPFSPAIRARSAVLAMLQAEQIEATRDVGAFFPQPFGVLVGLPALTGRGLFSRTYEIPVLVVSGDPLNSDLATDRLYTLADECARALATDTYRPSSWRSSVNAEPLPAIELTVTATVTELED
Ga0193740_10128423	3300020009	Soil	MIRPLELTAATAPANRARVALVELLASAGITASSDAGAFYPQPLGVLVGLPTLVGRTLAARTFTIPVLVVSGDPLNTQHAVDSIYALADDVAGAVRTIAYRPTSYRGSANAEPLPAVEIEATVTVTETEET
Ga0193738_10038416	3300020020	Soil	MSTPATLTAATRAIDAVLAALEAAGITATRDAGAFYPQPTGVLVGLPTLEGRGLSSRTFTVPVLVVSGDPLNVALAVDRVYALADDVALALGVNTYRPSSYRSSVNAEPLPAIEILDTFTVPEQEA
Ga0193738_10075316	3300020020	Soil	MSTPATLTAATRAIDAVVAMLEDAGITAQRDAGAFYPQPVGILVGLPTLTGRTLAARTFTLPVLVVSGDPFNSPVAVDRVYALADEAAYVLATAEYRPSSWRSSVNAEPLPAVELSVTVTVTEMEA
Ga0126371_105453643	3300021560	Tropical Forest Soil	LSVTPLTGAGAAIATTLAVLADAGIDATRDAGAFYPQPVGVLVGLPTLLRRTFAGATYEVPVLVVSGDPLNEELPVDRLYALADDCARAIGTDTYRPSSYQTSANAEPLPAIELAQILTLIETIEEA
Ga0207642_102641131	3300025899	Miscanthus Rhizosphere	MSTPATLNAATRAIEELVARLEEAGFSATRDAGAFFPQPVGVLVGLPTLVSRGLAARTFTIRVLVVSGDPLNTPLAVDRVYALADDVAYALATDAYRASSWRSSVNAEPLPAVELTVTVTVTETQEV
Ga0207663_100969845	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LTTPTVSSIAARALDALVALLADAGIDASRDAGAFYPQPVGVLVGLPTLTSRGHGSRTFTVPVFVVSGDPFNSEAAVNRALALADDVALATKTDNYRPSAYRGGVNSEPLPCFELSVVVTTPEEVSP
Ga0207659_102248922	3300025926	Miscanthus Rhizosphere	VSTLETLAPSIQAVKAVLAELADAGIPATRDPGAFFPQPVGVLVGLPTLIRRTQNGRVYTIQVLIVSGDPFNALGAVDRALALADDVALALRADNYRPSSWRSSGRAEPLPALELTVTATAKEASP
Ga0207664_100934771	3300025929	Agricultural Soil	MSVPVAIPVAVRAIDATLETLADAGIEATRDVGAFYPQPTGVLVGLPSLVGRGQATRTFELPVLVVSGDPLNVELAVDRLYAIADDVALALRTDAYRPSSWRSSINAEPLPALELTVTVTVTETEVS
Ga0207644_106137072	3300025931	Switchgrass Rhizosphere	MSTPATLNAATRAIEELVARLEEAGVSATRDAGAFFPQPVGVLVGLPTLVSRGLAARTFTIRVLVVSGDPLNTPLAVDRVYALADDVAYALATDAYRASSWRSSVNAEPLPAVELTVTVTVTETQEV
Ga0207648_108365861	3300026089	Miscanthus Rhizosphere	MSTPATLNAATRAIEELVARLEEAGVSATRDAGAFFPQPVGVLVGLPTLVSRGLAARTFTIRVLVVSGDPLNTPLAVDRVYALADDVAYALATDAYRASSWRSSVNAEPLPAVEL
Ga0209465_100044704	3300027874	Tropical Forest Soil	VSATPTKPLAVLAIDETLSMLAAASIEATRDAGAFYPQPIGVLVGLPTLLRRLQGGRVYSIPVLIVSGDPLNAEGSVDRIYAVADDVALVLRADAYRPSSYRSSSNAEPLPAIELLVTVSISEQEAPL
Ga0209465_100683054	3300027874	Tropical Forest Soil	MSVPVVTIGTAARRDLAARLEAAGIEASTDAGAFYPTPIGVLIGLPAYVARGLASRTFEVPVLVVSGDALNSELVVDRVLELADAVALALKTDNYAPSSWRSSSNAEPLPAFELTVTVTIEEEA
Ga0207428_100448021	3300027907	Populus Rhizosphere	VSTATAHPATRAVGAVLDELAGAGIEATRDPGAFYPQPVGVLVGLPELSKRTHGARVFAIPVLVVSGDPLNTELAVDRLYALTDDVALCLSIEAYRVSSWRSSVNAEPLPAIELAAVVSVTETAPLALIESEET
Ga0318534_100578366	3300031544	Soil	PAVLDAGAFYPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318534_106623932	3300031544	Soil	PTLVSRGLASSTFEVPVLVVSGDPLNAELAIDRVYGIADEVVRILRTDSYAVASWRSSANAEPLPALELTVTVTVS
Ga0318571_102615821	3300031549	Soil	EIRDALVAAGIPAVLDAGAFYPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318555_103995152	3300031640	Soil	ATGDAGAFFPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318574_101296401	3300031680	Soil	RMSSLSTTLASVARAELLAALEEAGVEATGDAGAFFPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318572_102577963	3300031681	Soil	FYPQPTGVLVGLPTLVSRGLASSTIEVPVLVVSGDPLNVELAVDRLNALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318493_101526741	3300031723	Soil	VLDAGAFYPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318493_102961302	3300031723	Soil	MSSLSTTLASVARAELLAALEEAGVEATGDAGAFFPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNAELAIDRVYGIADEVVRILRTDSYAVASWRSSANAEPLPALELTVTVTV
Ga0318500_107241791	3300031724	Soil	ASAASSLAALARREIRDALVAAGIPAVLDAGAFYPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318535_102457451	3300031764	Soil	IRDALVEAGIPAVLDAGAFYPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318554_101479585	3300031765	Soil	GAFYPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318550_104025331	3300031797	Soil	ASGGEVTPPPASSLAALARREIRDALVAAGIPAVLDAGAFYPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318565_100268191	3300031799	Soil	DAGAFYPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0307473_107622811	3300031820	Hardwood Forest Soil	AGIDATRDAGAFYPQPVGVLVGLPTLAGRLHAGRTFTVPVLVVSGDPFNAELAIDRAYALADDVALVLRTDTYRPSSYRSSVNAEPLPAIELAVTVTVTEEEA
Ga0318495_104187621	3300031860	Soil	EAGVEATGDAGAFFPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNAELAIDRVYGIADEVVRILRTDSYAVASWRSSANAEPLPALELTVTVTVS
Ga0306925_114505342	3300031890	Soil	PQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318520_107986682	3300031897	Soil	GAFYPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTVS
Ga0318562_100361996	3300032008	Soil	DPVGPIEPASGGEVTPPPASSLAALARREIRDALVEAGIPAVLDAGAFYPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0310911_106010491	3300032035	Soil	GVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318513_101260921	3300032065	Soil	VEGAGIPAVLDAGAFYPQPTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS
Ga0318525_102043851	3300032089	Soil	PTGVLVGLPTLVSRGLASSTFEVPVLVVSGDPLNVELAVDRLYALADRAIAILVTDSYAVASYRSSANAEPLPALELTVTVTLS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085973

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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