Metagenome / Metatranscriptome Family F086035

Basic Information
Family ID	F086035
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	60 residues
Representative Sequence	MEAGDSPEEHLPEYDFDPDKLNLRVRVTLAADRKSVDPVVEQVMQAVREMKCVNGKED
Number of Associated Samples	94
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	96.36 %
% of genes near scaffold ends (potentially truncated)	95.50 %
% of genes from short scaffolds (< 2000 bps)	96.40 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Unclassified (51.351 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.910 % of family members)
Environment Ontology (ENVO)	Unclassified (25.225 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.658 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.07% β-sheet: 0.00% Coil/Unstructured: 70.93%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF07650	KH_2	74.77
PF03471	CorC_HlyC	3.60
PF02562	PhoH	0.90
PF00004	AAA	0.90
PF07963	N_methyl	0.90
PF02954	HTH_8	0.90
PF13581	HATPase_c_2	0.90
PF02130	YbeY	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0319	ssRNA-specific RNase YbeY, 16S rRNA maturation enzyme	Translation, ribosomal structure and biogenesis [J]	0.90
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.90
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
All Organisms	root	All Organisms	48.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
cellular organisms	root	All Organisms → cellular organisms	48.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	45.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	22.52 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.52 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	11.71 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.52 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.52 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6.31 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.52 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.41 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02JF2LN	Not Available	502	Open in IMG/M
2199352024\|deeps_contig12647.8430	All Organisms → cellular organisms → Bacteria → Acidobacteria	1313	Open in IMG/M
3300004081\|Ga0063454_101058694	Not Available	658	Open in IMG/M
3300004633\|Ga0066395_10668020	Not Available	614	Open in IMG/M
3300004635\|Ga0062388_100517315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1072	Open in IMG/M
3300005175\|Ga0066673_10080308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1713	Open in IMG/M
3300005534\|Ga0070735_10038011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3280	Open in IMG/M
3300005537\|Ga0070730_10700831	Not Available	642	Open in IMG/M
3300005538\|Ga0070731_10388370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300005542\|Ga0070732_10756843	Not Available	592	Open in IMG/M
3300005542\|Ga0070732_10836883	Not Available	562	Open in IMG/M
3300005542\|Ga0070732_10949713	Not Available	525	Open in IMG/M
3300005921\|Ga0070766_10230944	All Organisms → cellular organisms → Bacteria → Acidobacteria	1167	Open in IMG/M
3300006028\|Ga0070717_10357278	Not Available	1307	Open in IMG/M
3300006086\|Ga0075019_10808535	Not Available	598	Open in IMG/M
3300006174\|Ga0075014_100154891	All Organisms → cellular organisms → Bacteria → Acidobacteria	1122	Open in IMG/M
3300006176\|Ga0070765_101730426	Not Available	587	Open in IMG/M
3300006755\|Ga0079222_10562247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300006796\|Ga0066665_10315027	All Organisms → cellular organisms → Bacteria → Acidobacteria	1263	Open in IMG/M
3300006806\|Ga0079220_11423128	Not Available	589	Open in IMG/M
3300006914\|Ga0075436_100959318	Not Available	641	Open in IMG/M
3300009088\|Ga0099830_11049046	Not Available	675	Open in IMG/M
3300009524\|Ga0116225_1104682	Not Available	1311	Open in IMG/M
3300009545\|Ga0105237_10705649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300009672\|Ga0116215_1445693	Not Available	560	Open in IMG/M
3300010048\|Ga0126373_13038956	Not Available	523	Open in IMG/M
3300010358\|Ga0126370_10542828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300010358\|Ga0126370_10782993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300010358\|Ga0126370_12382852	Not Available	525	Open in IMG/M
3300010360\|Ga0126372_11913928	Not Available	638	Open in IMG/M
3300010361\|Ga0126378_12389958	Not Available	603	Open in IMG/M
3300010376\|Ga0126381_102137692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300010376\|Ga0126381_104524257	Not Available	537	Open in IMG/M
3300010376\|Ga0126381_105096001	Not Available	503	Open in IMG/M
3300010379\|Ga0136449_100081407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6826	Open in IMG/M
3300010379\|Ga0136449_104312834	Not Available	526	Open in IMG/M
3300011120\|Ga0150983_15939293	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012189\|Ga0137388_10780632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300012685\|Ga0137397_11356882	Not Available	502	Open in IMG/M
3300013100\|Ga0157373_10141689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1691	Open in IMG/M
3300013105\|Ga0157369_12425934	Not Available	531	Open in IMG/M
3300014838\|Ga0182030_10309085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1733	Open in IMG/M
3300015264\|Ga0137403_10252810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1673	Open in IMG/M
3300015371\|Ga0132258_11428867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1748	Open in IMG/M
3300015371\|Ga0132258_11675130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1604	Open in IMG/M
3300015372\|Ga0132256_100278560	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1750	Open in IMG/M
3300016319\|Ga0182033_10630954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300016387\|Ga0182040_11482455	Not Available	576	Open in IMG/M
3300016445\|Ga0182038_11259460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300017822\|Ga0187802_10097751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1103	Open in IMG/M
3300017823\|Ga0187818_10301662	Not Available	703	Open in IMG/M
3300017932\|Ga0187814_10377351	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300017933\|Ga0187801_10364236	Not Available	596	Open in IMG/M
3300017937\|Ga0187809_10445444	Not Available	500	Open in IMG/M
3300017959\|Ga0187779_10565917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300017959\|Ga0187779_11121284	Not Available	550	Open in IMG/M
3300017995\|Ga0187816_10288845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300018007\|Ga0187805_10182896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300018046\|Ga0187851_10460704	Not Available	724	Open in IMG/M
3300018085\|Ga0187772_10138168	All Organisms → cellular organisms → Bacteria → Acidobacteria	1602	Open in IMG/M
3300018085\|Ga0187772_11164301	Not Available	567	Open in IMG/M
3300018086\|Ga0187769_11446651	Not Available	520	Open in IMG/M
3300018090\|Ga0187770_10288181	All Organisms → cellular organisms → Bacteria → Acidobacteria	1276	Open in IMG/M
3300020580\|Ga0210403_10359234	All Organisms → cellular organisms → Bacteria → Acidobacteria	1192	Open in IMG/M
3300021180\|Ga0210396_10016026	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6958	Open in IMG/M
3300021402\|Ga0210385_11388309	Not Available	537	Open in IMG/M
3300021405\|Ga0210387_10477819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300021406\|Ga0210386_10609543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300021406\|Ga0210386_11467212	Not Available	570	Open in IMG/M
3300021407\|Ga0210383_10741646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300021439\|Ga0213879_10230447	Not Available	556	Open in IMG/M
3300021474\|Ga0210390_10322911	Not Available	1307	Open in IMG/M
3300021560\|Ga0126371_11445436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300021560\|Ga0126371_12796022	Not Available	592	Open in IMG/M
3300022734\|Ga0224571_106401	Not Available	785	Open in IMG/M
3300025905\|Ga0207685_10096270	All Organisms → cellular organisms → Bacteria → Acidobacteria	1257	Open in IMG/M
3300025993\|Ga0208415_1003295	All Organisms → cellular organisms → Bacteria → Acidobacteria	1460	Open in IMG/M
3300026015\|Ga0208286_1018281	Not Available	563	Open in IMG/M
3300026291\|Ga0209890_10066551	All Organisms → cellular organisms → Bacteria → Acidobacteria	1298	Open in IMG/M
3300026371\|Ga0257179_1033712	Not Available	633	Open in IMG/M
3300026529\|Ga0209806_1247357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	601	Open in IMG/M
3300026941\|Ga0207741_1030048	Not Available	564	Open in IMG/M
3300027826\|Ga0209060_10521146	Not Available	539	Open in IMG/M
3300027874\|Ga0209465_10416787	Not Available	672	Open in IMG/M
3300028047\|Ga0209526_10259936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1185	Open in IMG/M
3300028146\|Ga0247682_1114279	Not Available	507	Open in IMG/M
3300030057\|Ga0302176_10120108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300030659\|Ga0316363_10309111	Not Available	630	Open in IMG/M
3300030707\|Ga0310038_10082854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1715	Open in IMG/M
3300030707\|Ga0310038_10360841	Not Available	640	Open in IMG/M
3300030991\|Ga0073994_12156355	All Organisms → cellular organisms → Bacteria → Acidobacteria	1072	Open in IMG/M
3300031028\|Ga0302180_10163581	All Organisms → cellular organisms → Bacteria → Acidobacteria	1224	Open in IMG/M
3300031231\|Ga0170824_122177082	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1670	Open in IMG/M
3300031716\|Ga0310813_10541409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300031719\|Ga0306917_11047862	Not Available	636	Open in IMG/M
3300031823\|Ga0307478_10686883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300031823\|Ga0307478_11454810	Not Available	568	Open in IMG/M
3300031962\|Ga0307479_11391635	Not Available	660	Open in IMG/M
3300032180\|Ga0307471_100610576	All Organisms → cellular organisms → Bacteria → Acidobacteria	1250	Open in IMG/M
3300032180\|Ga0307471_102387958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300032783\|Ga0335079_11851597	Not Available	585	Open in IMG/M
3300032828\|Ga0335080_12384055	Not Available	505	Open in IMG/M
3300032897\|Ga0335071_11080179	Not Available	748	Open in IMG/M
3300032898\|Ga0335072_11432792	Not Available	595	Open in IMG/M
3300032954\|Ga0335083_10684305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300033134\|Ga0335073_10512956	Not Available	1365	Open in IMG/M
3300033158\|Ga0335077_10714616	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1030	Open in IMG/M
3300033158\|Ga0335077_11783404	Not Available	579	Open in IMG/M
3300033158\|Ga0335077_12029394	Not Available	533	Open in IMG/M
3300033545\|Ga0316214_1033456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.89%
Host-Associated	Host-Associated	8.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.08%
Aquatic	Environmental → Aquatic	10.81%
Plants	Host-Associated → Plants	8.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.28%
Freshwater	Environmental → Aquatic → Freshwater	8.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.41%
Sediment	Environmental → Aquatic → Sediment	2.70%
Peat	Environmental → Terrestrial → Peat	1.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.80%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.12%
Loam	Environmental → Terrestrial → Soil → Loam	9.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.32%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.31%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.80%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.90%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.90%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025993	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026015	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026941	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_03885870	2065487018	Soil	MPTGDSAEEQLPEYDFDPEKLNLRVRVTLAADRKAVDQVVEQVMEAVREMKCVNGEE
deeps_01426280	2199352024	Soil	VSPTQPMDAGDSPEEHLPEYDFDPKKLNLRVRVTLAADRKAVDPVVEQVMQAVREM
Ga0063454_1010586942	3300004081	Soil	MPSGDSAEEHLPEYDFDPDKLNLRVRVALAADRKAVDQVVEQVMESVRDMKCVNGKEDAIELALQEA
Ga0066395_106680201	3300004633	Tropical Forest Soil	MPVGDSAEGQFPECDFDPDKLSLRVRVTLAADRKAVDPVVEQVMAAVRDAKCVN
Ga0062388_1005173152	3300004635	Bog Forest Soil	MEPCVPSTEDFPEHDFDPDKLDLRVRVTLAADRNAVEPVVARVMQTIREIGCVDGKEDAIELAL
Ga0066673_100803081	3300005175	Soil	MAADPSEEHFPEHNFDPDKLSLRVRVTLAADRKAVDPVVEQVMEAVREMKCVNGK
Ga0070735_100380111	3300005534	Surface Soil	MDSGASSEAQLPEHDFDPEKLSLQVRVTLAADRRAVDPVVEQVMDAVRQTKCVDGK
Ga0070730_107008312	3300005537	Surface Soil	MGAGDSSEEHLPEYDFDPEKLSLRVRVTLAADRRAVDPVVEQVMQAVREMKCVNG
Ga0070731_103883701	3300005538	Surface Soil	MTAALLGRDGDERAENMPAGDSTEENFPEYDFDPDKLNLRVRVALAADRKAVDEVVEQVMKAVRDMKCVNGKEDAIELALQ
Ga0070732_107568432	3300005542	Surface Soil	MEAGDSPEEHLPEYDFDPDKLNLRVRVTLAADRKSVDPVVEQVMQAVREMKCVNGKED
Ga0070732_108368832	3300005542	Surface Soil	MESGASPEEQLPEQDFDPERLTLSVRVTLAADRKAVDPVVEQVMESVRQMKCVDGKEDAIELSLQ
Ga0070732_109497132	3300005542	Surface Soil	LQGPMTNIVSEGSSEGTFPGYDFDPDKLKLQVRVTLAAERKSVDPVVARVMETIRQVNCSNGKE
Ga0070766_102309441	3300005921	Soil	MEPGVSSEEHFPEHDFDPGKLDLRVRVTLAANRKSVDPVVAQVMESVRQMKNIEGKEDAIELALQ
Ga0070717_103572781	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MESGASSEEQLPEHDFDPEKLNLRVRVTLAADRKAVDPVVAQVMESVRQMNGVNGKEDAI
Ga0075017_1001741133	3300006059	Watersheds	MESGAPPEEQLPEQDFDPERLTLSVRVTLAADRKAVDPVVEQVMESVRQMK
Ga0075019_108085351	3300006086	Watersheds	MESGASSEEQLPEHDFDPAKLNLRVRVTLAADRKSVDPVVAQVMESVREMKCVDGKEDAIELALQEA
Ga0075014_1001548911	3300006174	Watersheds	MESGASSEEQFPECNFDPEKLNLRVRVTLAADRKAVDPVVEQVMEAVRQMKCA
Ga0070765_1017304261	3300006176	Soil	MESGDSSEEQLPEYDFDPEKLNLRVRVTLAADRKAVDPVVEQVMEAVRQMKCADGKED
Ga0079222_105622472	3300006755	Agricultural Soil	MPAGDSAEEQFPEYDFDPEKLKVRVRVALAADRKAVDPVVEQIMQAVREMK
Ga0066665_103150272	3300006796	Soil	MEPGASPEGHFPEYDFDPDKLTLQVRVTLAADRKAVDPVVAQVMDTVRQLKCVDGKEDAIELSLQE
Ga0079220_114231282	3300006806	Agricultural Soil	MEAGDSPEPHLPEYDFDPDKLNLRVRVTLAADRKSVDPVVEQVMQAVREMKCVNGKEDAIELSLQEALA
Ga0075436_1009593181	3300006914	Populus Rhizosphere	MEAGDSPEPHLPEYDFDPEKLNLRVRVTLAADRKSVDPVVEQVMQAVREMKC
Ga0099830_110490461	3300009088	Vadose Zone Soil	MEFGASSEEHFPEHDFDPEKLDLRVRVTLAADRKAVDPVVAQVMESVRQMKNVDGK
Ga0116225_11046822	3300009524	Peatlands Soil	MNEPTMESGASSEEQLPEHDFDPEKLSLRVRVTLAADRRSVDPVVTQIMDSVRQMKCVDGKEDAIEL
Ga0105237_107056491	3300009545	Corn Rhizosphere	MAADPSEEHFPEYNFDPDQLSLRVRVTLAADRKAVDPVVDQVMQAVREMKCVNGKEDAIE
Ga0116215_14456932	3300009672	Peatlands Soil	MESGDSSEEQLPEYDFDPAKLNLRVRVTLAADRKSVDPVVAQVMESVRQMKCVDGKEDAIEL
Ga0126373_130389562	3300010048	Tropical Forest Soil	MPAGDSVEEHFPECDFDPEKLKVRVRVALAADRKAVDPVVEQVMQAVREMKCVNGKEDAIELSL
Ga0126370_105428282	3300010358	Tropical Forest Soil	MPDGDSTEEHFPECDFDPEKLSLRVRVTLAAERKSVDPVVEQVMDAVREMKCVN
Ga0126370_107829931	3300010358	Tropical Forest Soil	MEAGDTPEEHLPEYDFDPQKLKLRVRVTLAADRSSVEPVVAQVMQAVRDLNCVNGKEDAIELSLQEA
Ga0126370_123828521	3300010358	Tropical Forest Soil	MPAGDSAEEQFPEYDFDRDKLKVRVRVALAAERKAVDPVVEQVMQAVREMKCVNGKEDAI
Ga0126372_119139282	3300010360	Tropical Forest Soil	MEAGDTPEEHFPEYDFDPQKLKLRVRVTLAADRNSVEPVVAQVMQAVRDLNCVNGKEDAIELSLQEALAN
Ga0126378_123899582	3300010361	Tropical Forest Soil	MPAGDSAEEHLPECDFDPEKLKVRVRVALAADRTAVDPVVEQVMQAVREMKCVNG
Ga0126381_1021376921	3300010376	Tropical Forest Soil	MPAGDSADPQLPEYDFDPEKLTLRVRVSLAADRKSVDPVVEQVMQAVREMKCAN
Ga0126381_1045242572	3300010376	Tropical Forest Soil	MPAGDSTEEHFPECDFDPDQLSLRVRVKLAADRKAVDPVVEQVMEAIRDTKCVNGKA
Ga0126381_1050960011	3300010376	Tropical Forest Soil	MEAGDTPEEHFPEYDFDPQKLKLRVRVTLAADRNSVEPVVAQVMQAVRDLNCVNGKEDAIELSLQEA
Ga0136449_1000814071	3300010379	Peatlands Soil	MESGDSSEEHLPEHDFDPDKLNLRVRVTLAADRKSVDPVVEQVMDAVRQMKCVDGKEDAI
Ga0136449_1043128342	3300010379	Peatlands Soil	MEPGAPPAEQIPAYDFDPEKLNLRVRVTLAADRKSVDPVVEQVMGFVREMKCVDGKEDAIELALQEALAN
Ga0150983_159392931	3300011120	Forest Soil	MESEAFPGEHSPDHDFDPDQLTLRVRVTLAADRSAVEPVVAQVMETVRQMKFIDGKGRH*
Ga0137388_107806322	3300012189	Vadose Zone Soil	MQSEVPSDEHFPEHAFNPEKLILRLRVTLAADRKAVDPVVEQVMNTIREIKCLDGKEDAIELALQEALA
Ga0137397_113568821	3300012685	Vadose Zone Soil	MEPGASPEGHFPEYDFDPDKLTLQVRVTLAADRKAVDPVVAQVMDTVRELKCVDGKEDAIELSLHEALANA
Ga0157373_101416891	3300013100	Corn Rhizosphere	MAADPSEEHFPEYNVDPDQLSLRVRVTLAADRKAVDPVVDQVMQAVREMKCVNGKEDAIELALQEALAN
Ga0157369_124259342	3300013105	Corn Rhizosphere	MAADTSDEHLPEYNFDPDKLSLRVRVTLAADRKAVDPVVEQVMQAVREMKCV
Ga0182030_103090851	3300014838	Bog	MEPGPSSEEHLKHLPEHDFDPEKLDLRVRVTLAADRKAVDPVVTQVMEAVRQMKC
Ga0137403_102528103	3300015264	Vadose Zone Soil	MESGASSEAQFPEHDFDPEKLTLRVRVTLAANRNSVGPVVAEVMETVRQTRCVDGKEDAIELA
Ga0132258_114288673	3300015371	Arabidopsis Rhizosphere	MPGGDSTEEHFPECDFDPEKLSLRVRVTLAADRKAVDPVVEQVMDAVREMKCVNGKEDAI
Ga0132258_116751303	3300015371	Arabidopsis Rhizosphere	MPSGDSVEEHLPEYDFDPDKLNLRVRVALAADRKAVDQVVEQVMQSVRDMKCVNGKEDAIELALQEALAN
Ga0132256_1002785601	3300015372	Arabidopsis Rhizosphere	MPDGDSAEEHFPECDFDPEKLSLRVRVTLAAERKSVDPVVEQVMDAVREMKCVNG*
Ga0182033_106309542	3300016319	Soil	MAARDSVEEHFPEHDFDPEKLSLRVRVTLAADRKAGDPVVAQVMEAIRDTKCVNGKADAIELS
Ga0182040_114824552	3300016387	Soil	MTVGDSTEAQLPEYDFDPEKLSLRVRVTLAADRKAVDPVVAQVMEAVREMKCANGKEDAIELA
Ga0182038_112594601	3300016445	Soil	VGKKEPNMVAGDSPEAQLPEYDFDPEKLNLRVRVTLAADRKAVDPVVEQVMDAV
Ga0187802_100977512	3300017822	Freshwater Sediment	MAAGKSEDQFPEYDFDPAKLKLRVRVTLAASRKSVDPVVTQVMEAVRDLDCVNGKADAIE
Ga0187818_103016622	3300017823	Freshwater Sediment	MESGAPLEEQLPEKDFDPEQLNLRVRVTLAADRKAVDPVVEQVMESVRQMKCVDG
Ga0187814_103773512	3300017932	Freshwater Sediment	EEHLPEYDFDPEKLSLRVRVTLAADRNAVDPVVEQVMHAFREMKSVNGKEEAIELALQ
Ga0187801_103642361	3300017933	Freshwater Sediment	MEAGDSPEEHLPEYDFDPEKLSLRVRVMLAADRRAVDPVVEQVMQAVREMKCVNGKEE
Ga0187809_104454442	3300017937	Freshwater Sediment	MDSGASSEAQLPEHDFDLEKLSLQVRVTLAADRRAVDPVVEQVMDAVRQTKCVDGKE
Ga0187779_105659172	3300017959	Tropical Peatland	MEAGDTCEEHLPEYDFDPQKLKLRVRVTLAADRTSVEPVVAQVMQAVRDLHCVNG
Ga0187779_111212842	3300017959	Tropical Peatland	MDSGASSEEQFQEHDFDPARLKLRVRVTLAASREAVDPVVQQVMEAVREINCVNGKADA
Ga0187816_102888451	3300017995	Freshwater Sediment	MESGASSEEQLPEHDFDPAKLNLRVRVTLAADRKSVDPVVAQVMETVRQMKN
Ga0187805_101828961	3300018007	Freshwater Sediment	MESGDASEEHLPEYDFDPAKLNLRVRVKLAADRKAVDPVVEQVMESVREMKCVDGKEDAIEL
Ga0187851_104607042	3300018046	Peatland	MESGASSEEHFPEHDFDPERLDLRVRVTLAADRKAVDPVVTQVMEAVRQMKCVD
Ga0187772_101381681	3300018085	Tropical Peatland	MASGVSPEEHLPEYDFDPARLNLRVRVTLAADRDSVSPVVDQVMQSVRQMKCADGKEDAIELALQ
Ga0187772_111643012	3300018085	Tropical Peatland	MVPGDSSEENFPEYDFDPSQLSLRVRVTLAADRKAVDPVVEQVMEAVRQMKGINGKEDAIELALA
Ga0187769_114466511	3300018086	Tropical Peatland	MDSEASSSEHFAGYDFDPEKLDLRVRVTLAANRAAVDPVVAQVMEAVRDVKCVNGKADAI
Ga0187770_102881812	3300018090	Tropical Peatland	MGIGDSAQQHFPEYDFDPAKLDLQVQVKFGADRKSVEPVVAQVMESIRRMKCVDGKED
Ga0210403_103592341	3300020580	Soil	MESEASSEEHFPEYDFDPEKLNLRVRVTLAADRKAVDPVVEQVMEAVRQMKCADG
Ga0210396_100160263	3300021180	Soil	MESEASSEVHLPEYDFDPEKLDLRVRVTLAADRKSVDPVVAQVMSSVREMKCADGK
Ga0210385_113883091	3300021402	Soil	MDSAVSPEEHLPEHDFDPNSLRLRVRATLAADRKSVDPVVQQVMDAIHDVKCVDGKEDAIELALQEA
Ga0210387_104778191	3300021405	Soil	MESGPSSQELFPGHDFDPEKLDVRVRVTLAADRKAVDPVVAQIMESVREMKCAEGKEEAIELALQEALAN
Ga0210386_106095431	3300021406	Soil	MDAGDSAEEHFPEYDFDPQKLNLRVRVTLAADRKAVDPVVQQVMQAVREMNCVNGKEDAIELAL
Ga0210386_114672122	3300021406	Soil	MESEASSEVHLPEYDFDPEKLDLRVRVTLAADRKSVDPVVAQVMSSVREMKCADGKEDAIELALQEALA
Ga0210383_107416462	3300021407	Soil	MEPGVSSEEHFPEHDFDPGKLDLRVRVTLAANRKSVDPVVAQVMESVRQMKNIEGKEDAI
Ga0213879_102304472	3300021439	Bulk Soil	MQAGDSSDAQFPEHDFDPSKLSLRVSVTLAAERKSVDPVVEQVMQAVRDTNCVNGKA
Ga0210390_103229111	3300021474	Soil	MESGASSEEQLPEHDFDPGKLSLRVRVTLAADRRSVDPVVTQIMDSVRDMKCVDGKEDAI
Ga0126371_114454362	3300021560	Tropical Forest Soil	MEAGDSPEERFSEYDFDPEKLTLRVRVTLAANRQSVDPVVAQVMESVRDLKCMNGKEDSIELALQEA
Ga0126371_127960221	3300021560	Tropical Forest Soil	MEAGDTPEEHFPEYDFDPQKLKLRVRVTLAADRNSVEPVVAQVMQAVRDLNCVNGKEDAIELSLQEALA
Ga0224571_1064011	3300022734	Rhizosphere	MESGDSPEEHFPEHDFDPAKLDLRVRVTLAADSKAVDPVVTQVMAAVRQMKCADGKEDAIELALQ
Ga0207685_100962702	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MPTGESPEEQLPEYDFDPEKLNLRVRVTLAADRKAVDQVVEQVMAAVREMKCVNG
Ga0208415_10032951	3300025993	Rice Paddy Soil	MAADPSEEQLPEYNFDPDKLSLRVRVTLAADRKAVDPVVEQVMQAVREMKCVNGKEDAIELA
Ga0208286_10182812	3300026015	Rice Paddy Soil	MAADPSEEQLPEYNFDPDKLSLRVRVTLAADRKAVDPVVEQVMQAVREMKCVNGKEDA
Ga0209890_100665511	3300026291	Soil	MESGVSSEDQLPEYDFDPEKLEVRVRVTLAADRKSVDPVVEQVMEAVRQMKCSDGKED
Ga0257179_10337121	3300026371	Soil	MSSDGPDEQLSDYNFDPEKLTLRLQVTLAADRSAIDAVVRQVMDSIRQTKCADGKEDAIELALNEALAN
Ga0209806_12473571	3300026529	Soil	MAADPSEEHFPEHNFDPDKLSLRVRVTLAADRKAVDPVVEQVMEAVREMKCV
Ga0207741_10300481	3300026941	Tropical Forest Soil	MTNGPTMESGASPEEHRPEYDFDPDQLDLRVRVTLAADRKAVDPVVEQVMESIRAMK
Ga0209060_105211462	3300027826	Surface Soil	MPTGDSADEQLPEYDFDPDKLNLRVRVALAADRKAVDQVVEQVMQAVRDMKCVNGKEDAI
Ga0209465_104167871	3300027874	Tropical Forest Soil	MPVGDSAEGQFPECDFDPDKLSLRVRVTLAADRKAVDPVVEQVMAAVRDAKCVNGKADAIELALQ
Ga0209526_102599362	3300028047	Forest Soil	MESEVPSDEHFPEQDFDPQKLILQLRVTLAADRNAVEPVVAQVMSTLREIKCLDGK
Ga0247682_11142792	3300028146	Soil	MPAGDSAEPQLPECDFDPEKLTLRVRVSLAADRKSVDPVVEQVMQAVHDMKCANGKEDAIELALQEA
Ga0302176_101201081	3300030057	Palsa	MEPGVPSTEDVPEHDFDPDKLDLRVRVTLAADRNAVEPVVTRVMQTIRELGCVDGKEDAIELALQE
Ga0316363_103091111	3300030659	Peatlands Soil	MESGDSSEEQLPEYDFDPAKLNLRVRVTLAADRKSVDPVVAQVMDSVRQMKCVDGKEDAIELSLQE
Ga0310038_100828543	3300030707	Peatlands Soil	MESGDSSEEQLPEYDFDPAKLNLRVRVTLAADRKSVDPVVAQVMESVRQMKCVDGKEDAIELA
Ga0310038_103608411	3300030707	Peatlands Soil	MESGDSSEEHLPEHDFDPDKLNLRVRVTLAADRKSVDPVVEQVMDAVRQMKCVDGKEDAIELA
Ga0073994_121563552	3300030991	Soil	MESEVPSDEDFPEHDFDPQKLILQLRVTLAADRSAVEPVVAQVMNTIRDIKCLDGKEDA
Ga0302180_101635811	3300031028	Palsa	MEAGDSTEQHFPEHDFDPAKLDLQVQVKFGADRKSVEPVVAQVMGYIRRMKCVDGKEDA
Ga0170824_1221770821	3300031231	Forest Soil	MEFGASSEEHFPEHDFDPEKLDLRVRVTLAADRKAVDPVVAQVMESVRQMKNV
Ga0310813_105414091	3300031716	Soil	MAADPSEEHFPEHNFDPDQLSLRVRVTLAADRKAVDPVVEQVMQAVREMKCVN
Ga0306917_110478622	3300031719	Soil	MTVGDSTEAQLPEYDFDPEKLSLRVRVTLAADRKAVDPVVAQVMEAVREMK
Ga0307478_106868832	3300031823	Hardwood Forest Soil	MESEASSEVHLPEYDFDPEKLDLRVRVTLAADRKSVDPVVAQVMSSVREMKCADGKEDAIELALQE
Ga0307478_114548101	3300031823	Hardwood Forest Soil	MVRDPGEGSLPEYDFDPAHLSLQVRVTLAAVRKSVDPVVTQVMEAVRQTNCVDGK
Ga0307479_113916351	3300031962	Hardwood Forest Soil	MPTGESPEEQLPEYDFDPEKLNLRVRVTLAADRKAVDEVVEQVMAAVREMKCVNGKEDA
Ga0307471_1006105761	3300032180	Hardwood Forest Soil	MPTGDSAEEHLPEYDFDPEKLNLRVRVTLAADRKAVDPVVEQIMQAVREMKCANGKED
Ga0307471_1023879582	3300032180	Hardwood Forest Soil	MESGASAEENFPEYNFDPEKLNLRVRVTLAADRKSVDPVVAQVMESVRSIKCADGKEDA
Ga0335079_118515972	3300032783	Soil	MQPGVSGDEQFPEYDFDPRKLTLRVQVTLAADRKSVEPVVEQVMQAIRDTNCLNGKEDAV
Ga0335080_123840551	3300032828	Soil	MPAGDSAEPQLPEYDFDPEKLTLRVRVSLAADRKSVDPVVEQVMQAVRDM
Ga0335071_110801791	3300032897	Soil	MPAGDSAEPQLPEYDFDPEKLTLRVRVSLAADRKSVDPVVDQVMQAVRDMKCANGKEDAIELALQEALANA
Ga0335072_114327921	3300032898	Soil	MEAGDSPEEHFPEHDFDPDKLSLRVRVTLAADRKSVDPVVEQVMEAIRETKCVNGKEDAIELA
Ga0335083_106843052	3300032954	Soil	MESGASPEAQLPEHDFDPEKLSLQVRVTLAADRRAVDPVVEQVMDAVRQTKCVDGKEDAIELSLQEALAN
Ga0335073_105129561	3300033134	Soil	MQAGDSPEEHFPEYDFDPQKLNLRVRVTLAADRNAVDPVVAQVMQAVREMKCVNGKEDAIELALHEAL
Ga0335077_107146162	3300033158	Soil	MESGASSEEQLPEYDFDPEKLSLRVRVTLAADRKAVDPVVEQVMDAVRHMKCVDGQEDAIELSLQEALRKIPARLWSAW
Ga0335077_117834042	3300033158	Soil	MQPGVSCDEQFPEYDFDPRKLSLRVQVTLAADRKSVDPVVEQVMQAVRDMN
Ga0335077_120293941	3300033158	Soil	MEAGDTSEEQIPEYDFDPEKLSLRVRVTLAANRKSVDPVVEQVMRAVRDIKC
Ga0316214_10334562	3300033545	Roots	MESGASSEEHFPGCDFDPDKLTLRMRVTLAAHRQSVDPVVAQVMDSIRNVNCVNGKVD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086035

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign