Metagenome / Metatranscriptome Family F086046

Basic Information
Family ID	F086046
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	47 residues
Representative Sequence	MFRPSHESLLLQNAEIDRLELPRIQDDTELEALKADGSLLAI
Number of Associated Samples	98
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.29 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	95.50 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.216 % of family members)
Environment Ontology (ENVO)	Unclassified (26.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.351 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.86% β-sheet: 0.00% Coil/Unstructured: 67.14%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF13183	Fer4_8	32.43
PF02910	Succ_DH_flav_C	1.80
PF01725	Ham1p_like	0.90
PF00977	His_biosynth	0.90
PF01797	Y1_Tnp	0.90
PF13237	Fer4_10	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0127	Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family	Nucleotide transport and metabolism [F]	0.90
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	95.50 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	56.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	33.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	56.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	56.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	49.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	40.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_11236416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300000789\|JGI1027J11758_12800421	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300001546\|JGI12659J15293_10069690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	778	Open in IMG/M
3300001593\|JGI12635J15846_10495631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	722	Open in IMG/M
3300001593\|JGI12635J15846_10795643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	542	Open in IMG/M
3300002245\|JGIcombinedJ26739_101067527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	694	Open in IMG/M
3300003368\|JGI26340J50214_10158265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	566	Open in IMG/M
3300004082\|Ga0062384_100049964	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2019	Open in IMG/M
3300004082\|Ga0062384_100198250	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1182	Open in IMG/M
3300004139\|Ga0058897_10916539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300005367\|Ga0070667_101503857	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300005434\|Ga0070709_10390407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1037	Open in IMG/M
3300005434\|Ga0070709_10562189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	874	Open in IMG/M
3300005435\|Ga0070714_102379943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	515	Open in IMG/M
3300005437\|Ga0070710_11038712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300005537\|Ga0070730_10507606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	774	Open in IMG/M
3300005712\|Ga0070764_10144549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1304	Open in IMG/M
3300005993\|Ga0080027_10032130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1875	Open in IMG/M
3300006028\|Ga0070717_10092097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2560	Open in IMG/M
3300006173\|Ga0070716_101759930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300006175\|Ga0070712_101010278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300006804\|Ga0079221_11524979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300006893\|Ga0073928_10189139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1622	Open in IMG/M
3300009092\|Ga0105250_10199394	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300009623\|Ga0116133_1133950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300011120\|Ga0150983_13508062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2104	Open in IMG/M
3300012096\|Ga0137389_11682053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	531	Open in IMG/M
3300012918\|Ga0137396_10782559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	702	Open in IMG/M
3300012918\|Ga0137396_10998661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300015197\|Ga0167638_1083784	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300015372\|Ga0132256_100966733	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	967	Open in IMG/M
3300017943\|Ga0187819_10182453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1242	Open in IMG/M
3300017975\|Ga0187782_10976669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	658	Open in IMG/M
3300017995\|Ga0187816_10146448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1022	Open in IMG/M
3300018019\|Ga0187874_10100363	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1262	Open in IMG/M
3300018030\|Ga0187869_10302736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	769	Open in IMG/M
3300018468\|Ga0066662_10273166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1399	Open in IMG/M
3300019275\|Ga0187798_1135084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	806	Open in IMG/M
3300021088\|Ga0210404_10359845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300021170\|Ga0210400_10143292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1921	Open in IMG/M
3300021344\|Ga0193719_10245916	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300021404\|Ga0210389_10876389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	699	Open in IMG/M
3300021404\|Ga0210389_11050846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300021404\|Ga0210389_11207902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300021406\|Ga0210386_10842860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300021432\|Ga0210384_10420389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1204	Open in IMG/M
3300021433\|Ga0210391_10464645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300021474\|Ga0210390_10389763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1178	Open in IMG/M
3300021474\|Ga0210390_10773199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300022709\|Ga0222756_1085408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	521	Open in IMG/M
3300022712\|Ga0242653_1032345	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300022716\|Ga0242673_1107864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300022724\|Ga0242665_10009103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1965	Open in IMG/M
3300023030\|Ga0224561_1024338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300023255\|Ga0224547_1024745	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300024049\|Ga0233359_1032262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	604	Open in IMG/M
3300025414\|Ga0208935_1058044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	519	Open in IMG/M
3300025463\|Ga0208193_1060382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	804	Open in IMG/M
3300025906\|Ga0207699_10441538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	932	Open in IMG/M
3300025911\|Ga0207654_10803203	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300025929\|Ga0207664_11725511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300025986\|Ga0207658_11627033	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300026217\|Ga0209871_1013411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1526	Open in IMG/M
3300026217\|Ga0209871_1037999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300026281\|Ga0209863_10082144	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	950	Open in IMG/M
3300026557\|Ga0179587_10424398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	868	Open in IMG/M
3300026890\|Ga0207781_1016703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	753	Open in IMG/M
3300027370\|Ga0209010_1050623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300027548\|Ga0209523_1065054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300027610\|Ga0209528_1028076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300027663\|Ga0208990_1067447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1038	Open in IMG/M
3300027667\|Ga0209009_1074963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300027738\|Ga0208989_10122059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	883	Open in IMG/M
3300027825\|Ga0209039_10329771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300027853\|Ga0209274_10091122	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1494	Open in IMG/M
3300027867\|Ga0209167_10834782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300027875\|Ga0209283_10475751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	806	Open in IMG/M
3300027895\|Ga0209624_11130474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300027898\|Ga0209067_10254237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300027986\|Ga0209168_10103296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1470	Open in IMG/M
3300028036\|Ga0265355_1000752	All Organisms → cellular organisms → Bacteria	1864	Open in IMG/M
3300028780\|Ga0302225_10250261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300028800\|Ga0265338_10434327	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	931	Open in IMG/M
3300028906\|Ga0308309_10939250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300029636\|Ga0222749_10213128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	970	Open in IMG/M
3300029914\|Ga0311359_10798882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	662	Open in IMG/M
3300029944\|Ga0311352_10721411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	785	Open in IMG/M
3300030737\|Ga0302310_10609093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	576	Open in IMG/M
3300030815\|Ga0265746_1036384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	649	Open in IMG/M
3300030937\|Ga0138302_1446393	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	502	Open in IMG/M
3300030991\|Ga0073994_12429809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	842	Open in IMG/M
3300031010\|Ga0265771_1028079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300031028\|Ga0302180_10550294	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	560	Open in IMG/M
3300031236\|Ga0302324_100609556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1563	Open in IMG/M
3300031446\|Ga0170820_14852101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300031715\|Ga0307476_10691645	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	755	Open in IMG/M
3300031718\|Ga0307474_10175632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1624	Open in IMG/M
3300031788\|Ga0302319_10290661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1929	Open in IMG/M
3300031823\|Ga0307478_10216374	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300031823\|Ga0307478_10904718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300031823\|Ga0307478_11479280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	562	Open in IMG/M
3300031962\|Ga0307479_10575232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1109	Open in IMG/M
3300031962\|Ga0307479_11142567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	744	Open in IMG/M
3300031962\|Ga0307479_11584762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	610	Open in IMG/M
3300032174\|Ga0307470_10286372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300032180\|Ga0307471_100668442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1202	Open in IMG/M
3300032515\|Ga0348332_12882892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300032805\|Ga0335078_10193085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2836	Open in IMG/M
3300032828\|Ga0335080_10552450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1217	Open in IMG/M
3300033134\|Ga0335073_10060955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5000	Open in IMG/M
3300034199\|Ga0370514_198751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.69%
Host-Associated	Host-Associated	6.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.98%
Aquatic	Environmental → Aquatic	11.71%
Plants	Host-Associated → Plants	6.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.87%
Freshwater	Environmental → Aquatic → Freshwater	9.91%
Peat	Environmental → Terrestrial → Peat	7.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.90%
Sediment	Environmental → Aquatic → Sediment	0.90%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.44%
Loam	Environmental → Terrestrial → Soil → Loam	23.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.01%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.80%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.50%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.80%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.80%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.90%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.90%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.90%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300024049	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-P30	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031010	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086046

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_112364161	3300000789	Soil	MFRPSHESLLLQNAEVDRLNLPRIQDDTELEALKA
JGI1027J11758_128004213	3300000789	Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLLEITSGETLRFDPRLDPSRRF
JGI12659J15293_100696901	3300001546	Forest Soil	MFRPSHESLLLQNAEVDRMELPRIQDDDELEALKASGALQPILAGDSLRFDPRLD
JGI12635J15846_104956312	3300001593	Forest Soil	MFRPSHESLLLQNAEVDRMELPRIQDDDELEALKA
JGI12635J15846_107956431	3300001593	Forest Soil	MFRPSHESLLIQNAEIDRLELPRIEDETELEALKADGSLQEIISGEMLRFDPRLDPS
JGIcombinedJ26739_1010675271	3300002245	Forest Soil	MFRPSHESLILQNAEIDRLELPRIQDDDELEALKASQALLPIRASESLR
JGI26340J50214_101582651	3300003368	Bog Forest Soil	MFRPSHESLLIQNAEIDRLELPRIQDDTELEALKADGNLLPIRSSE
Ga0062384_1000499644	3300004082	Bog Forest Soil	MFRPSHQSLLVQNAEINRMELPRIQDDAELEHLKAIEALV
Ga0062384_1001982502	3300004082	Bog Forest Soil	MFRPSHESLLAQNAEVDRLELPRIQDDDELEALKASGALQPIVAGESL
Ga0058897_109165391	3300004139	Forest Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLVPIIPSETLRIEHSLD
Ga0070667_1015038572	3300005367	Switchgrass Rhizosphere	MFRPSRESLLRQNAEIDRAELPRIQDDDELEALKASQVLVPIVASEHVRFDPRLDP
Ga0070709_103904073	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLVPIIPSETLRIEHS
Ga0070709_105621891	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHDSLLLQNQEIDRLDLPRIADDEELESLKASEALVPILES
Ga0070714_1023799431	3300005435	Agricultural Soil	MFRPSHESLLMQNAEIDRLELPRIQDDDELEALKASGALQPIIAGETLRFDPRLDPSR
Ga0070710_110387122	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHESLLLQNAEVDRLNLPRIQDDTELEALKADGSLVAITPSQ
Ga0070730_105076061	3300005537	Surface Soil	MFRPSHESLLIQNAEINRLELPRIQNETELEALKADGSLL
Ga0070764_101445491	3300005712	Soil	MFRPSHESLILQNAEVDRLNLPRIQDETELEALKADGSLREIVTGESLRIDP
Ga0080027_100321301	3300005993	Prmafrost Soil	MFRPSHESLLLQNAEINRLELPRIQDDDELEQLKLSQDLLPIRTSESLRFDPR
Ga0070717_100920973	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHESLLLQNAEVDRLNLPRIQDETELEALKADGSL
Ga0070716_1017599301	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHESLLLQNAEINRLELPRIQDDNELEMLKAGGALLPIRASET
Ga0070712_1010102781	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHESLLIQNAEINRLDLPRIQDDTELEALKADGSLLPIRAGEM
Ga0079221_115249791	3300006804	Agricultural Soil	MFRPSHESLLLQNAEVDRLNLPRIQDDTELEALKADGSLVAITPSQSLRI
Ga0073928_101891392	3300006893	Iron-Sulfur Acid Spring	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQPIIAGETLRFDPRLDPS
Ga0105250_101993942	3300009092	Switchgrass Rhizosphere	VFRPSRESLLLQNHEIDRMDLPRIQDDAELEQLKASEDLVPILA
Ga0116133_11339502	3300009623	Peatland	MFRPSHQSLLVQNAEINRMELPRIQDDAELEHLKATEALVPIRTSESLRFDPRLDPTR
Ga0150983_135080623	3300011120	Forest Soil	MFRPSHESLLIQNAEIDRLELPRIEDETELEALKADGSLLEIVSGEMLRFDPRLDPS
Ga0137389_116820531	3300012096	Vadose Zone Soil	MFRPSHESLLLQNAEINRLDLPRIQDDDELEALKASGAL
Ga0137396_107825592	3300012918	Vadose Zone Soil	MFRPSHESLLLQNAEVNRLELPRIQNDDELEALKASG
Ga0137396_109986611	3300012918	Vadose Zone Soil	MFKPSHESLILQNAEIDRLELPRIQDDDELEALKASQA
Ga0167638_10837841	3300015197	Glacier Forefield Soil	VFRPSRESLLLQNHEIDRMDLPRIQDDAELEQLKASEDLVPILAG
Ga0132256_1009667331	3300015372	Arabidopsis Rhizosphere	VFRPSHESLLLQNQEIDRMELPRIQDDAELEQLKASEELVPIVAGPTLR
Ga0187819_101824532	3300017943	Freshwater Sediment	MFRPSHESLLIQNAEIDRLDLPRIQDETELEALKADGSLV
Ga0187782_109766691	3300017975	Tropical Peatland	MFKPTHESLLIQNAEINRLELPRIQDETELEALKADGSLLPIIPSESLRIEPSL
Ga0187816_101464482	3300017995	Freshwater Sediment	MFRPSHESLLIQNAEINRLELPRIQNETELEALKADGSLLEIR
Ga0187874_101003633	3300018019	Peatland	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQPIIAGESLRFDPRLDPSRRY
Ga0187869_103027362	3300018030	Peatland	MFRPTHESLLAQNAEVDRLELPRIQDDDELEALKAT
Ga0066662_102731661	3300018468	Grasslands Soil	MFRPSHESLLIQNAEINRLVLPRIQNDTELEALKA
Ga0187798_11350841	3300019275	Peatland	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLVPIIPGETLRIEHSLD
Ga0210404_103598452	3300021088	Soil	MFRPSHESLLAQNAEVDRLELPRIQDDDELEALKASGALQPIIAGESLRFDPR
Ga0210400_101432923	3300021170	Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQPIIAGETLRFDP
Ga0193719_102459161	3300021344	Soil	VFRPSRESLLLQNQEIDRMDLPRIQDDAELEQLKASEDLV
Ga0210389_108763891	3300021404	Soil	MFRPSHESLLLQNEEIDRLDLPRIQDDDELDALKAS
Ga0210389_110508461	3300021404	Soil	MFRPSHESLLIQNAEIDRLELPRIEDETELEALKADGSLLEIISGEMLRFDPR
Ga0210389_112079021	3300021404	Soil	MFRPSHESLLLQNAEIDRLELPRIQDDTELEALKADGSLLAI
Ga0210386_108428601	3300021406	Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGS
Ga0210384_104203892	3300021432	Soil	MFRPSHESLLLQNEEINRLELPRIQDDDELAALIESQALLPIRTGTTLRI
Ga0210391_104646452	3300021433	Soil	MFRPSHESLLLQNAEVDRLELHRILDDDELEALKASGELQPIIQGETLR
Ga0210390_103897632	3300021474	Soil	MFRPSHESLLLQNAEVDRMELPRIQDDDELEALKASGALQP
Ga0210390_107731992	3300021474	Soil	MFRPSHESLLLQNAEIDRLELPRIQDDTELEALKADGSLLAIVPNE
Ga0222756_10854081	3300022709	Soil	MFRPSHESLLIQNAEINRLELPRIQDETELEALKADGSLLEIRSGETL
Ga0242653_10323452	3300022712	Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLVPIIPSETLR
Ga0242673_11078641	3300022716	Soil	MFRPSHESLLLQNAEIDRLELPRIQDDTELEALKADGSLLAIVPNESLKIE
Ga0242665_100091031	3300022724	Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLVPIIPSETLRI
Ga0224561_10243381	3300023030	Soil	MFRPSHESLLAQNAEVDRLELPRIQDDDELEALKASGALQPI
Ga0224547_10247452	3300023255	Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKANGALQEIMASE
Ga0233359_10322621	3300024049	Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKFSGALLPIIAGETLRF
Ga0208935_10580441	3300025414	Peatland	MFRPSHESLLLQNAEVDRMELPRIQDDDELEALKASGALQEIIAGET
Ga0208193_10603821	3300025463	Peatland	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQPIIAGDTLRFDPRL
Ga0207699_104415381	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHDSLLLQNQEIDRLDLPRIADDEELESLKASEALVPILESESLRF
Ga0207654_108032031	3300025911	Corn Rhizosphere	MFRPSHDSLLLQNQEIDRLDLPRIADDEELESLKASEALVP
Ga0207664_117255113	3300025929	Agricultural Soil	MFRPSHESLILQNAEVNRLDLPRIQDETELEALKADGSLLPIVPGEALRIEPSLDPSRRY
Ga0207658_116270331	3300025986	Switchgrass Rhizosphere	MFRPSRESLLRQNAEIDRAELPRIQDDDELEALKASQVLVPIVASEH
Ga0209871_10134113	3300026217	Permafrost Soil	MFRPSHESLLIQNAEIDRLDLPRIQNDTELEALKGDGSLLEIRAGETLRFDPRLDPSRRY
Ga0209871_10379991	3300026217	Permafrost Soil	MFRPSHESLLIQNAEIDRLELPRIEDETELEALKAD
Ga0209863_100821441	3300026281	Prmafrost Soil	MFRPSHESLLLQNAEINRLELPRIQDDDELEQLKLSQDLLPIRTSESLRFDP
Ga0179587_104243981	3300026557	Vadose Zone Soil	MFRPSHESLLLQNAEINRLELPRIQDDNELEMLKAGGALLPIRAS
Ga0207781_10167031	3300026890	Tropical Forest Soil	MFRPSHESLLIQNAEINRLELPRIQDETELEALKADGSLVPIIPSDSLRIE
Ga0209010_10506231	3300027370	Forest Soil	LIQNAEIDRLELPRIQDDDELEALKASGALQPIIAGESLRFDPRLDP
Ga0209523_10650541	3300027548	Forest Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLVAIVPSET
Ga0209528_10280762	3300027610	Forest Soil	MFRPSHESLILQNAEIDRLELPRIQDDDELEALKASQ
Ga0208990_10674472	3300027663	Forest Soil	MFRPSHESLLLQNAEINRLDLPRIQDDDELEALKISGALLPIRASDTLRFDPRLDPSR
Ga0209009_10749631	3300027667	Forest Soil	MFRPSHESLLIQNAEIDRLELPRIEDETELEALKADGSLLEIISGEML
Ga0208989_101220591	3300027738	Forest Soil	MFRPSHESLLLQNAEINRLDLPRIQDDDELEALKISGALLPIRASDTLRFD
Ga0209039_103297712	3300027825	Bog Forest Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQEIIAGESLRFDPRLDPSRRFCRP
Ga0209274_100911222	3300027853	Soil	MFRPSHESLLLQNAEVDRMELPRIQDDDELEALKASGALQEIVA
Ga0209167_108347821	3300027867	Surface Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQPIIPGETLRFDPRLDPTRRY
Ga0209283_104757511	3300027875	Vadose Zone Soil	MFRPSHESLLLQNAEINRLDLPRIQDDDELEVLKVSGALLPIRASDTLRFDPRLDP
Ga0209624_111304741	3300027895	Forest Soil	MFRPSHESLLIQNAEIDRLELPRIEDETELEALKADGSLLEIISGEMLRFDP
Ga0209067_102542373	3300027898	Watersheds	MFRPSHESLLIQNAEIDRLDLPRIQDETELEALKADGSLLEIKAG
Ga0209168_101032963	3300027986	Surface Soil	MFRPSHESLLLQNAEVDRLELPRIEDDDELEALKASGA
Ga0265355_10007523	3300028036	Rhizosphere	MFRASHESLLIQNAEIDRLELPRIQDDDELEALKASGALQPIIAGESLRFDPRLDPSRRY
Ga0302225_102502612	3300028780	Palsa	MFRPSHQSLLVQNAEINRMELPRIQDDAELEHLKAIEALVPIRI
Ga0265338_104343272	3300028800	Rhizosphere	MFRPSHESLLIQNAEINRLDLPRIQNETELEALKADGSLLEIRAGETLRFDP
Ga0308309_109392502	3300028906	Soil	MFRPSHESLLAQNAEVDRLELPRIQDDDELEALKASGALQ
Ga0222749_102131281	3300029636	Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQEIIAGESLRFDPRLD
Ga0311359_107988821	3300029914	Bog	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKVSGALQP
Ga0311352_107214111	3300029944	Palsa	MFRPSHQSLLVQNAEINRMELPRIQDDAELEHLKATEALVP
Ga0302310_106090931	3300030737	Palsa	MFRPSHESLLLQNAEIDRLELPRIQDDDELEALKASGALQPIIAGETLRFDPRLDPSR
Ga0265746_10363841	3300030815	Soil	MFRPSHESLLIQNAEINRLDLPRIQNDTELEALKGDGSLLPIRAGETLRFDPRLD
Ga0138302_14463931	3300030937	Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKFSGALLPIIAGETLRFDPRLDP
Ga0073994_124298092	3300030991	Soil	MFRPSHESLLLQNAEINRLDLPRIQDDDELEALKI
Ga0265771_10280791	3300031010	Soil	MFRASHESLLIQNAEIDRLELPRIQDDDELEALKASGALQ
Ga0302180_105502941	3300031028	Palsa	MFRPSHESLLLQNAEINRMDLPRIQDDDELEAMKLRGDLLPIIAGETLRFDPRLDPSR
Ga0302324_1006095563	3300031236	Palsa	MFRPSHESLLLQNAEINRMDLPRIQDDDELEAMKLRGDLLPIIAGE
Ga0170820_148521011	3300031446	Forest Soil	MFRPSHESLLIQNAEIDRLDLPRIQNDTELEALKG
Ga0307476_106916452	3300031715	Hardwood Forest Soil	MFRPSHESLLVQNAEIDRLELPRIQDDDELEALKASGALQPIIAGEALRFDPRLDPSRR
Ga0307474_101756321	3300031718	Hardwood Forest Soil	MFRPSHESLLLQNAEVNRLDLPRIQDDKELEALKAS
Ga0302319_102906613	3300031788	Bog	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKVSGALQPI
Ga0307478_102163741	3300031823	Hardwood Forest Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKAD
Ga0307478_109047182	3300031823	Hardwood Forest Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGAL
Ga0307478_114792801	3300031823	Hardwood Forest Soil	MFRPSHESLLIQNAEINRLDLPRIQNDTELEALKADGSLLE
Ga0307479_105752322	3300031962	Hardwood Forest Soil	MFRPSHDSLLRQNEEIDRLELPRIADDIELEELKASH
Ga0307479_111425672	3300031962	Hardwood Forest Soil	MFRPSHESLILQNAEIDRLELPRIQDDDELEALKASQALLPIRTS
Ga0307479_115847621	3300031962	Hardwood Forest Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKFSGALQPIIAGETLRFDPRL
Ga0307470_102863722	3300032174	Hardwood Forest Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLLQIKAGET
Ga0307471_1006684421	3300032180	Hardwood Forest Soil	MFRPSHESLILQNAEIDRLELPRIQDDDELEALKASQALLPIRA
Ga0348332_128828922	3300032515	Plant Litter	MFRPSHESLIIQNAEIDRLELPRIEDETELEALKADGSL
Ga0335078_101930853	3300032805	Soil	MFRPSHESLLIQNAEINRLELPRIQNDTELEALKGDGSLLPIRAGETLR
Ga0335080_105524501	3300032828	Soil	MFRPSHESLLIQNAEINRLELPRIQDETELEALKADGSLLPIV
Ga0335073_100609551	3300033134	Soil	MRWNPVFRPSHDSLLRQNAEIDRMDLPRIQDDAELQQLIASKDLVPIEENETLRFDPR
Ga0370514_198751_1_114	3300034199	Untreated Peat Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKVSGA

Hidden Markov Model


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