Metagenome / Metatranscriptome Family F086053

Basic Information
Family ID	F086053
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	71 residues
Representative Sequence	AGLPKTRLVIACVLDRAGLLRRPQVLEPGSAVMTSKVLTALNSWKFRPVLRGDQPVEVNAILGFNIDTNDQY
Number of Associated Samples	101
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	2.70 %
% of genes from short scaffolds (< 2000 bps)	2.70 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Most Common Taxonomy
Group	Unclassified (97.297 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.712 % of family members)
Environment Ontology (ENVO)	Unclassified (26.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.450 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.00% β-sheet: 30.00% Coil/Unstructured: 59.00%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.212.1.2: TolA/TonB C-terminal domain	d1u07a_	1u07	0.66
d.212.1.1: TolA/TonB C-terminal domain	d1lr0a1	1lr0	0.63
d.212.1.1: TolA/TonB C-terminal domain	d3qdpa_	3qdp	0.61
b.22.1.1: TNF-like	d1rj8a_	1rj8	0.55
d.142.1.2: Glutathione synthetase ATP-binding domain-like	d1w96a3	1w96	0.55

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF03544	TonB_C	14.41
PF04255	DUF433	3.60
PF00873	ACR_tran	1.80
PF00296	Bac_luciferase	1.80
PF05015	HigB-like_toxin	0.90
PF07617	DUF1579	0.90
PF13366	PDDEXK_3	0.90
PF04357	TamB	0.90
PF02517	Rce1-like	0.90
PF00578	AhpC-TSA	0.90
PF00226	DnaJ	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	14.41
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	3.60
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.80
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	0.90
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.90
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.90

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
All Organisms	root	All Organisms	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
cellular organisms	root	All Organisms → cellular organisms	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.70 %

Scaffold	Taxonomy	Length	IMG/M Link
3300012922\|Ga0137394_10905556	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300031057\|Ga0170834_104487026	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031231\|Ga0170824_120307352	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M

Environmental Properties

Associated Habitat Types

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Habitat	Taxonomy	Distribution
Environmental	Environmental	88.29%
Host-Associated	Host-Associated	11.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.18%
Plants	Host-Associated → Plants	11.71%
Aquatic	Environmental → Aquatic	8.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.01%
Sediment	Environmental → Aquatic → Sediment	5.41%
Freshwater	Environmental → Aquatic → Freshwater	2.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.70%
Peat	Environmental → Terrestrial → Peat	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.51%
Loam	Environmental → Terrestrial → Soil → Loam	10.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.21%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.90%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_105601352	3300001593	Forest Soil	APQAMRSDLPPGLPKSRLVIACVLDRTGLLRRAQVLEPATAVMTSKVLTALTSWKFRPVLRGNEPIEVNAILGFNIDTNDRF*
JGI25384J37096_102331432	3300002561	Grasslands Soil	PAGLPHARLVITCILTPSGLLRNPLVLEPGPAVMTSKVLAALSNWKFRPALRGSQPVEVNAILGFNIDTSDRF*
JGI25386J43895_100919751	3300002912	Grasslands Soil	VIACILDRSGLLKNPQVLEPGGREMTGKVLASLPNWKFRPVLRGDQPVEVNAILGFNIDTR*
JGI25386J43895_101982781	3300002912	Grasslands Soil	LQRSRLILACILDRSGLLRDTKVIEQTAMDTTTKVLASLPNWKFSPALRGDQPVEVTVYLGFNIDTKDRF*
Ga0062595_1002832501	3300004479	Soil	RLVIACVLDRTGSLRRPQVLEPGSAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDRF*
Ga0062594_1017801082	3300005093	Soil	GLPKARLVISCVLDRSGLLRRPHVIEPANAVMTSKVLTALNSWKFRPARRGTDPIEVNAILGFNIDTNDQY*
Ga0070660_1010223712	3300005339	Corn Rhizosphere	DLTAPQAMRSDLPPGLPKARLVISCVLDRSGLLRRPHVIEPASAVMTSKVLTALNSWKFRPARRGTDPIEVNAILGFNIDTNDQY*
Ga0066689_101131961	3300005447	Soil	HSRLVIACILNRSGLLRNPQVLEPGTALMTSKILAALSNWKFRPVLRGNQPVEVNAILGFNIDTSDRF*
Ga0070679_1005811891	3300005530	Corn Rhizosphere	LPKARLVISCVLDRSGLLRRPHVLEPANAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDQY*
Ga0070679_1010941742	3300005530	Corn Rhizosphere	PPGLPKARLVISCVLDRSGLLRRPHVIEPANAVMTSKVLTALNSWKFRPARRGTDPIEVNAILGFNIDTNDQY*
Ga0070697_1011752932	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	NLQRSRLILACILDRSGLLRDTKVIEQTTTDTTTKVLASLPNWKFSPALRGDQPVEVTVYLGFNIDTKDRF*
Ga0070731_110906452	3300005538	Surface Soil	TPSRLVIACVLDRSGALRNPQVLEPGRGELTSKVLAALTSWKFRPVFRGDQPVEVNAILGFAIDTR*
Ga0070733_101651782	3300005541	Surface Soil	RADLPANLKPSRLVIACILDRSGVLRNPQVLEAGRGDLTAKVLAALTSWKFRPVFRGDQPVEVNAILGFDIDTR*
Ga0070693_1006615802	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	GLPKARLVISCVLDRSGVLRRPHVLEPANAVMTSKVLTALNTWKFRPVLRGNEPIEVNAILGFNIDTNDQY*
Ga0066692_106588672	3300005555	Soil	TCILTPSGLLRNPLVLEPGPAVMTSKVLAALSNWKFRPALRGSQPVEVNAILGFNIDTSDRF*
Ga0066699_103492001	3300005561	Soil	LQRSRLVIACILDRSGLLRNPQVLEPGGGEMTGKVLASLPNWKFRPVLRGDQPVEVNAILGFNIDTR*
Ga0068855_1017264802	3300005563	Corn Rhizosphere	GLPKARLVISCVLDRSGLLRRPHVLEPANAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDQY*
Ga0075023_1004275061	3300006041	Watersheds	AGLPKTRLVIACVLDRAGLLRRPQVLEPGSAVMTSKVLTALNSWKFRPVLRGDQPVEVNAILGFNIDTNDQY*
Ga0066652_1013048782	3300006046	Soil	LDRAGLLRRPRVLEPASAVMTSKVLAALNSWKFSPALRGDQPIEVSVIIGFNINTDDQF*
Ga0075024_1006566612	3300006047	Watersheds	LVIGCVLDRSGLVRRPKVLEPASAVMTSKVLAALNGWKFRPVLRGNEPIEVTAILGFNIDTNDVF*
Ga0070716_1015481391	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	APEPMRAEVPSALQRSRLVIACILDRSGLLKNPQVLEPGGREMTGKVLASLPNWKFRPVLRGDQPVEVNAILGFNIDTR*
Ga0075014_1002086501	3300006174	Watersheds	PQAMRTDVPAGLPKARLVIGCVLDRSGLVRRPKVLEPASAVMTSKVLAALNGWKFRPVLRGNEPIEVNAILGFNIDTNDVF*
Ga0070712_1020402212	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LPPGLPKSRLVIACVIDRTGLLRRPHVLEPGSAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDQY*
Ga0075021_101320372	3300006354	Watersheds	DLSAPQPMRADLPAGLPKARLVIGCVVDRSGLLRSPKVLEPASAVMTSKVLAALNGWKFRPALRGEQPIEVNAILGFNIDTNDVF*
Ga0066659_102793432	3300006797	Soil	ADGPAGLSKSRLVIACILDRSGSLKNVQVLEAGTSEMTTKVLAALPSWKSRPVLRSDQPVEVHAILGFNIDTR*
Ga0075434_1012655442	3300006871	Populus Rhizosphere	DRSGLLRKLQVLEKGTDSMTSKVMAALPNWKFRPVLRGSEPVEVNVIVGFNIDTR*
Ga0099793_101679271	3300007258	Vadose Zone Soil	APQAMRSDLPPGLPKSRLVIACVIDRTGLLRRAQVLEPATAVMTSKVLTALNNWKFRPVLRGNEPIEVNAILGFNIDTNDRF*
Ga0066709_1041196412	3300009137	Grasslands Soil	LDRSGLLRDTKVIEQTTTDTTTKVLASLPNWKFSPALRGDQPVEVTVYLGFNIDTKDRF*
Ga0114129_104057762	3300009147	Populus Rhizosphere	CVLDRSGLVRRPQVLEPGPAVMTSKVLAALNSWKFRPVLRGEQPVEVNAILGFNIDTNDRF*
Ga0105242_109541311	3300009176	Miscanthus Rhizosphere	QAYAEDLTAPQAMRSDLPPGLPKSRLVIACVIDRTGLLRRPHVLEPGSAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDQY*
Ga0126373_114298452	3300010048	Tropical Forest Soil	SSHFRPSRLVIACILDRSGQLRGTQVLEPGSAEMTSKVLASLPGWKFRPAFRGDQPVEVNAILGFNIDTR*
Ga0126370_112015051	3300010358	Tropical Forest Soil	NLKPSRLVIACILDRSGALRSLQVLEPGSSEMTAKVMAALASWKFRPVYRGDQPIEVNAILGFNIDTR*
Ga0126379_105210122	3300010366	Tropical Forest Soil	ARLVIACVLDRSGLLRRAQVLEPATAPMTSKVLAALSSWKFRPVLRGNEPVEVNAILGFNIDTNDRF*
Ga0137392_108270641	3300011269	Vadose Zone Soil	LDSSGLVRRPKVLEPASAVMTSKVLAALTGWKFRPALRGDQPIEVNVILGFNIDTNDVF*
Ga0137391_107098931	3300011270	Vadose Zone Soil	MRSDLPPGLPKSRLVIACVLDRTGLLRRAQVLEPATAVMTSKVLTALNSWKFRPALRGNEPIEVNAILGFNIDTNDRF*
Ga0137388_102574161	3300012189	Vadose Zone Soil	VLDRSGLIKNARVLEAGGPEMTTKVLAALSSWKFRPVLRSDQPVEVNAILGFNIDTR*
Ga0137399_102638881	3300012203	Vadose Zone Soil	RLVIECVLDRSGLLRRPRVLEPASAVMTSKVLAALISWKFSPALRGDQPIEVSVILGFNINTDDQF*
Ga0137362_109318022	3300012205	Vadose Zone Soil	LDRSGLLKNPQVLEPGGREMTGKVLASLPNWKFRPVLRGDQPVEVNAILGFNIDTR*
Ga0137376_113141931	3300012208	Vadose Zone Soil	RAGLLRRPRVLEPASAVMTSKVLAALNSWKFSPALRGDQPIEVSVIIGFNINTDDQF*
Ga0137390_109506691	3300012363	Vadose Zone Soil	PQAMRSDLPPGLPKSRLVIACVLDRTGLLRRAQVLEPATAVMTSKVLTALNSWKFRPALRGNEPIEVNAILGFNIDTNDLF*
Ga0137394_109055562	3300012922	Vadose Zone Soil	DRSGLLKNPQVLEPGGREMTGKVLASLPNWKFRPVLRGDQPVEVNAILGFNIDTR*
Ga0137359_110602192	3300012923	Vadose Zone Soil	DRTGLLRRAQVLEPATAVMTSKVLTALNNWKFRPVLRGNEPIEVNAILGFNIDTNDRF*
Ga0126369_100707243	3300012971	Tropical Forest Soil	LTANLPPSRLVIACTLDRSGALRNAKVLEGGTAPSTTEVLAALPNWKFRPALRGDDPVEVNAILGFNIDTR*
Ga0126369_120991621	3300012971	Tropical Forest Soil	ADLERSRLVIACILDRSGLLRNARVIEQTTPETTTKILAALPNWKFTPALRGNQPVEVNAILGFNIDTKDRF*
Ga0164305_118952062	3300012989	Soil	APQAMRSDLPTGLPKSRLVIACVIDRTGLLRRPHVLEPGSAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDQY*
Ga0157372_111784102	3300013307	Corn Rhizosphere	YAEDLTAPQAMRSDLPSGLPKARLVISCVLDRSGLLRRPHVLEPANAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDQY*
Ga0182018_101086052	3300014489	Palsa	APQPMRSDLPANLKPSRLVIACILDRSGSLRNLQVLEPGRPDMTTKVLAALTSWKFRPVFRGDQPVEVNAILGFDIDTR*
Ga0157379_101459353	3300014968	Switchgrass Rhizosphere	DRSGLLRRPHVIEPANAVMTSKVLTALNSWKFRPARRGTDPIEVNAILGFNIDTNDQY*
Ga0157379_101690181	3300014968	Switchgrass Rhizosphere	AYAEDLTAPQAMRSDLPPGLPKSRLVIACVIDRTGLLRRPHILEPGSAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDQY*
Ga0137418_107685972	3300015241	Vadose Zone Soil	DLQRSRLVIACILDRSGLLRNAQVLEPGGSEMTGKVLASLPNWKFRPVLRGDQPVEVNAILGFNIDTR*
Ga0137409_100991652	3300015245	Vadose Zone Soil	MERTRYQQRRPRVLEPASAVMTSKVLAALNSWKFSPVLRGAQPVEVSVIIGFNINTDDQF
Ga0182033_116018081	3300016319	Soil	GEISSHFKPSRLVIACILDRSGDLRGTQVLEPGSAEMTSKVLASLPNWKFRPAFRGDQPVEVNAILGFNIDTR
Ga0182037_104924411	3300016404	Soil	RLVLSCVLDRSGQIRDVKVLEPGTADMTEKIVASLSNWKFRPVLRSDQPVEVNAILGFNIDTR
Ga0187818_101982052	3300017823	Freshwater Sediment	PRPLRTDLPVGLPRARLVIACVLTETGLLRNPQVLEPGPAVMTSKVLTALSKWKFGAAMRGDQPVEVNAILGFNIDTN
Ga0187817_105000891	3300017955	Freshwater Sediment	PAGLPRARLVIACILTQSGLVRDPRVLDPGPAVMTSKVLAALSRWKFRPAFRGDQPVEVNVFLGFNIDTN
Ga0187817_111166171	3300017955	Freshwater Sediment	LKPSRLIIACVLDRSGILKNPQVLEPGGSEMTSKVLAALPSWKFRPVFRGDQPVEVNAILGFAIDTR
Ga0187778_112971691	3300017961	Tropical Peatland	KDMPTGLPKARLVIVGSLDTSGLLRDLKVYEAGPALMTSKVLAALVHWKFTPALRGDQPVEVRTILGFNIDTNDRF
Ga0187767_101005031	3300017999	Tropical Peatland	PPNLKMSRMVISCVLDRSGLLRNAQVLEGSRENSNKILAALSSWKFRPVFRGDQPIEVTAILGFHIDTR
Ga0187765_108718881	3300018060	Tropical Peatland	KARLVIVCNLDTSGLLRDLRVYEAGPALMTSKVLAALVHWKFTPALRGDQPVEVRTILGFNIDTNDRF
Ga0187784_115064271	3300018062	Tropical Peatland	MRADLPANLKPSRLLIACVLDRSGMIKDPHVLEAAGGDLSAKILASLPSWKFRPVFRGQQPIEVNAILGFAIDTR
Ga0187772_100891711	3300018085	Tropical Peatland	LKLSRLLIACVLDRSGMIKDPHVLEAARTDLSAKILASLPNWKFRPVFRGEQPIEVNAILGFAIDTR
Ga0187771_100739851	3300018088	Tropical Peatland	TVISCTLDRSGLLRNPQVLEGSRETTNQVLAALSSWKFRPVFRGDQPIEVTAILGFQIDT
Ga0187771_102184251	3300018088	Tropical Peatland	PVRADLPANLKLSRTVISCTLDRSGMLRNPQVLEGSRETTNQVLAALSSWKFRPVFRGDQPIEVTAILGFQIDTR
Ga0187774_109042241	3300018089	Tropical Peatland	NLRRSRLVIACVLDRSGLLRKAQVLQYANRETSAKVVAALSAWKFRPAFRGQQPIEVNAILGFDIDTR
Ga0066667_119713651	3300018433	Grasslands Soil	RLVIACILDRSGLLRNAQVLEPGGSEMTGKVLASLPNWKFRPVLRGDQPVEVNAILGFNIDTR
Ga0066669_115650512	3300018482	Grasslands Soil	QRSRLVIACILDRSGLLKNPQVLEPGGREMTGKVLASLPNWKFRPVLRGDQPVEVNAILGFNIDTR
Ga0193728_12526721	3300019890	Soil	MRSELPEGLPRARLVIACVLDRTGSLRRPQVLEPGSAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDRF
Ga0210403_113351272	3300020580	Soil	FAEALIAPEPMRTDLPAHLHPSRLVIACVIDRAGMIRNPQVLEAGGTELTAKVMAALPSWKFRPVFRGDQPIVVTAILGFAINTN
Ga0210399_110058152	3300020581	Soil	QPMRSDLPANLKLSRLVIACILDRSGTLRNLQVLDGGGTAMTTKVLAALTNWKFRPVFRGDQPVEVNAILGFDIDTR
Ga0210405_113278531	3300021171	Soil	QPMRSDLPANLKPSRLVIACILDRSGSLRNLQVLEPGRADMTAKVLAALTSWKFRPVFRGDQPVEVNAILGFDIDTR
Ga0193719_101969451	3300021344	Soil	PSDLQRSRLVIACILDRSGLLRNAQVLEPGGSEMTGKVLASLPNWKFRPVLRGDQPVEVNAILGFNIDTR
Ga0210383_115351042	3300021407	Soil	QPMRSDLPANLKPSRLVIACILDRSGTLRNLQVLDGGGSQMTSKVLAALPSWKFRPVFRGDQPIDVNAILGFDIDTR
Ga0210384_100705291	3300021432	Soil	IACVVDRSGLLRKPQVLEPASAVMTSKVLAALNGWKFRPALRGDQPIEVNAILGFNINTDDQF
Ga0210384_114463802	3300021432	Soil	ILDRAGTLRPLQVLESGGSEMTTKVLAALTNWKFRPVFRGDQPVEVNAILGFNIDTR
Ga0126371_117364591	3300021560	Tropical Forest Soil	RVDVKGEVSSHFRPSRLVIACILDRSGQLHGTQVLEPGSAEMTSKVLASLPAWKFRPAFRGDQPVEVNAILGFNIDTR
Ga0242657_10223512	3300022722	Soil	YDLPANLKPSRLVIACILDRSGSLRNLQVLEPGRADMTTKVLAALTSWKFRPVFRGDQPVEVNAILGFDIDTR
Ga0207643_102654461	3300025908	Miscanthus Rhizosphere	AEDLTAPQAMRSDLPPGLPKARLVISCVLDRSGLLRRPHVIEPANAVMTSKVLTALNSWKFRPARRGTDPIEVNAILGFNIDTNDQY
Ga0207654_100271023	3300025911	Corn Rhizosphere	LVIACVIDRTGLLRRPHVLEPGSAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDQY
Ga0207652_111008682	3300025921	Corn Rhizosphere	PPGLPKARLVISCVLDRSGLLRRPHVIEPANAVMTSKVLTALNSWKFRPARRGTDPIEVNAILGFNIDTNDQY
Ga0207646_105814613	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	CILDRSGLLRDTKVIEQTTTDTTTKVLASLPNWKFSPALRGDQPVEVTVYLGFNIDTKDR
Ga0207640_106698111	3300025981	Corn Rhizosphere	GYAEDLTAPQAMRSDLPTGLPKARLVISCVLDRSGLLRRPHVIEPASAVMTSKVLTALNSWKFRPARRGTDPIEVNAILGFNIDTNDQY
Ga0209863_101707501	3300026281	Prmafrost Soil	LVIACTLDRTGLLRTPHVLDGNSSELSAKVLAALPTWKFRPVLRGNQPIEVNAILGFDIDTN
Ga0209863_102471892	3300026281	Prmafrost Soil	GGEDLTAPRPMRASVIAPPNMKRSRLVIACVLDRTGIVRNAHVLEPGAVEMTTKVMAALPSWKFSPVLRGNQPVEVNAILGFDIDTR
Ga0209235_10517392	3300026296	Grasslands Soil	GLPHARLVITCILTPSGLLRNPLVLEPGPAVMTSKVLAALSNWKFRPALRGSQPVEVNAILGFNIDTSDRF
Ga0209761_11147641	3300026313	Grasslands Soil	DPTSAQHPYAEDLLAPQPMHTDLPAGLPHARLVITCILTPSGLLRNPLVLEPGPAVMTSKVLAALSNWKFRPALRGSQPVEVNAILGFNIDTSDRF
Ga0209761_13029321	3300026313	Grasslands Soil	RLVIACILDRSGLLKNPQVLEPGGREMTGKVLASLPNWKFRPVLRGDQPVEVNAILGFNIDTR
Ga0209470_13188491	3300026324	Soil	HPSADDLEMPRVIHADVPASLPKARLVIACVLDRSGLLRRPQVLEPGPAVMTSKVLAALNSWKFRPVLRGEQPVEVNAILGFNIDTNDRF
Ga0209056_102537501	3300026538	Soil	IHADVPASLPKARLVIACVLDRSGLLRRPQVLEPGPAVMTSKVLAALNSWKFRPVLRGEQPVEVNAILGFNIDTNDRF
Ga0209805_11530422	3300026542	Soil	LQRSRLVIACILDRSGLLRNPQVLEPGGGEMTGKVLASLPNWKFRPVLRGDQPVEVNAILGFNIDTR
Ga0209527_10093751	3300027583	Forest Soil	CVLDRSGLLRRPQVLEPGTAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTSDR
Ga0208827_10662681	3300027641	Peatlands Soil	NMKPSRLVIACLLDRTGTLRNLRVLESAGGETTAKVLVALANWKFSPVFRGDQPIEVSAILGFNIDTR
Ga0209011_11410152	3300027678	Forest Soil	LPKSRLVIACVLDRTGLLRRAQVLEPATAVMTSKVLTALTSWKFRPVLRGNEPIEVNAILGFNIDTNDRF
Ga0209590_108249672	3300027882	Vadose Zone Soil	PAGLPHARLVITCILTPSGLLRNPLVLEPGPAVMTSKVLAALSNWKFRPALRGSQPVEVNAILGFNIDTSDRF
Ga0209068_103356781	3300027894	Watersheds	PKSRLVIACILDRTGLLRRAQVLEPATAVMTSKVLIALNSWKFRPVLRGNEPIEVNAILGFNIDTNDRF
Ga0209624_103336392	3300027895	Forest Soil	VLTVPEEIHTDLPAGLPRSRLVIGCVLDAFGNLKNLRVIEAGPADMTAKVMAALPSWKFTPVMIGNQPFEVNAILGFNIDTNDRR
Ga0209583_106266302	3300027910	Watersheds	TAPQAMRSELPQGLPKARLVIACVLDRTGSLRRPQVLEPGSAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDRF
Ga0209168_103447441	3300027986	Surface Soil	LPANLKPSRLVIACILDRSGALRNLQVLEPGSGEMTTKVLAALASWKFRPVFRGDQPVEVNAILGFDIDTR
Ga0265354_10276222	3300028016	Rhizosphere	PANLKPSRLVIACILDRTGTLRNMQVLDGGGSAMTSKILTALTNWKFRPVFRGDQPIEVNAILGFDIDTR
Ga0268266_102136301	3300028379	Switchgrass Rhizosphere	VIACVIDRTGLLRRPHILEPGSAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDQY
Ga0170834_1030587852	3300031057	Forest Soil	PQVMRSDLPSGLPKSRLVIACVLDRSGLLRRPQVLEPATAVMTSKVLTALNGWKFRPVLRGNEPIEVNAILGFNIDTNDRF
Ga0170834_1044870262	3300031057	Forest Soil	VIACTLDRSGSLRGTQVLEPGSAEMTSKVLASLPNWKFRPAFRGDEPVEVNAILGFNIDT
Ga0170824_1203073522	3300031231	Forest Soil	LASPEPMRVDVRGELPAGFKPSRLVIACTLDRSGSLRGTQVLEPGSAEMTSKVLASLPNWKFRPAFRGDEPVEVNAILGFNIDTR
Ga0310686_1060006581	3300031708	Soil	PSRLVIACILDRSGVLRNLQVLEPGSREMTTKVLAALNSWKFRPVFRGEQPVEVNAILGFDIDTR
Ga0307476_103465552	3300031715	Hardwood Forest Soil	NLKPSRLVIACILDRSGSLRNLQVLEPGRADMTTKVLAALTSWKFRPVFRGDQPVEVNAILGFDIDTR
Ga0307479_108020392	3300031962	Hardwood Forest Soil	MRSELPPGLPKARLVIACVLDRSGLLRRPQVLEPASAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDRF
Ga0307471_1000292611	3300032180	Hardwood Forest Soil	RAEVPSDLQRSRLVIACILDRSGLLKNPQVLEPGGREMTGKVLASLPNWKFRPVLRGDQPVEVNAILGFNIDTR
Ga0335070_113851361	3300032829	Soil	SRMVIACILDQSGAIRNARMLEAGGEQTNAKVLASLTKWKFKPAFRGDQPVEVNAILGFNIDTR
Ga0335069_115531542	3300032893	Soil	IAPQTVRADLPANLKRSRLVIACTLDRAGLLRNPRVLEPGGGDLTSKVLAALSNWKFRPVFHGDQPVEVTAILGFGIDTN
Ga0335071_119059182	3300032897	Soil	ACTLDRAGLLRNPRVLEPGGGDLTSKVLAALSNWKFRPVFHGDQPVEVTAILGFGIDTN
Ga0335072_107012881	3300032898	Soil	LIAPHPMRTDLPANLKRSRIVISCVVDSSGLIRKARVLEPGPRDFTTKILAALPEWKFRPAFRGERPVEVNAILGFDIDTR
Ga0326723_0155898_47_283	3300034090	Peat Soil	MRSDLPTGLPKARLVIACVIDRSGLLRRPHVLEPATAVMTSKVLTALNSWKFRPVLRGNEPIEVNAILGFNIDTNDQY

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086053

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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