Metagenome Family F086100

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086100
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	103 residues
Representative Sequence	ELIQPICARMSLPAGTRHQIEQALETLWRLLEPPADRRTQFRFVYREPFNDALALLELYALSSGKYVDVFRQWSSFAQRVKRAEGEANPPARRKRRRRH
Number of Associated Samples	98
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.67 %
% of genes near scaffold ends (potentially truncated)	90.09 %
% of genes from short scaffolds (< 2000 bps)	93.69 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.198 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.117 % of family members)
Environment Ontology (ENVO)	Unclassified (37.838 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.351 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.33% β-sheet: 0.00% Coil/Unstructured: 45.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00266	Aminotran_5	34.23
PF11373	DUF3175	5.41
PF13517	FG-GAP_3	2.70
PF12627	PolyA_pol_RNAbd	1.80
PF00072	Response_reg	0.90
PF13565	HTH_32	0.90
PF01850	PIN	0.90
PF13188	PAS_8	0.90
PF12804	NTP_transf_3	0.90
PF13186	SPASM	0.90
PF01548	DEDD_Tnp_IS110	0.90
PF00535	Glycos_transf_2	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.20 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.20 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.20 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.50 %
Unclassified	root	N/A	1.80 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	84.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.80 %
Unclassified	root	N/A	1.80 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	84.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.80 %
Unclassified	root	N/A	1.80 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	84.68 %
Unclassified	root	N/A	1.80 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	84.68 %
Unclassified	root	N/A	1.80 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	84.68 %
Unclassified	root	N/A	1.80 %
unclassified Janthinobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	84.68 %
Unclassified	root	N/A	1.80 %
Janthinobacterium sp. CG3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium → Janthinobacterium sp. CG3	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps_contig17465.11451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1589	Open in IMG/M
3300000956\|JGI10216J12902_119780573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300003987\|Ga0055471_10287836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300004081\|Ga0063454_100277943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300004480\|Ga0062592_101313229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300005167\|Ga0066672_10879534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005176\|Ga0066679_10784267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300005187\|Ga0066675_10501475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	907	Open in IMG/M
3300005329\|Ga0070683_100750128	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300005329\|Ga0070683_101013453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300005340\|Ga0070689_100359070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1224	Open in IMG/M
3300005341\|Ga0070691_10411157	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005343\|Ga0070687_101235499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300005343\|Ga0070687_101468306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300005434\|Ga0070709_11641546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300005434\|Ga0070709_11687258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300005451\|Ga0066681_10263223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300005456\|Ga0070678_101643096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300005459\|Ga0068867_100696818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300005467\|Ga0070706_101337824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300005532\|Ga0070739_10196443	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300005544\|Ga0070686_101545995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300005552\|Ga0066701_10760025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300005557\|Ga0066704_11007359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300005558\|Ga0066698_10355883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1011	Open in IMG/M
3300005561\|Ga0066699_10011281	All Organisms → cellular organisms → Bacteria → Proteobacteria	4469	Open in IMG/M
3300005561\|Ga0066699_11272113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005575\|Ga0066702_10612531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300005577\|Ga0068857_101771469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300005616\|Ga0068852_101581747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300005616\|Ga0068852_102585470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300005719\|Ga0068861_101330332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300005719\|Ga0068861_102357713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300005952\|Ga0080026_10285497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300006046\|Ga0066652_100788522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300006173\|Ga0070716_100220050	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300006358\|Ga0068871_100549257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300006794\|Ga0066658_10757002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300006797\|Ga0066659_10694901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300006797\|Ga0066659_11534840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300006800\|Ga0066660_10672417	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300006871\|Ga0075434_100952337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300007076\|Ga0075435_101707728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300007255\|Ga0099791_10126401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1187	Open in IMG/M
3300009012\|Ga0066710_104477397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300009090\|Ga0099827_10120639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2111	Open in IMG/M
3300009093\|Ga0105240_11252498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300009098\|Ga0105245_12089797	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300009176\|Ga0105242_11140825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300009177\|Ga0105248_12262779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300009177\|Ga0105248_12566118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300009660\|Ga0105854_1096102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300009840\|Ga0126313_11637692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300010399\|Ga0134127_12331274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300010401\|Ga0134121_13184008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300011007\|Ga0139299_1068988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300011119\|Ga0105246_10279473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1338	Open in IMG/M
3300011269\|Ga0137392_11279103	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300011271\|Ga0137393_10887174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300011427\|Ga0137448_1124912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300012010\|Ga0120118_1009685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2803	Open in IMG/M
3300012035\|Ga0137445_1020219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221	Open in IMG/M
3300012096\|Ga0137389_10216076	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300012951\|Ga0164300_11056406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012955\|Ga0164298_10633650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300012988\|Ga0164306_10784188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300013306\|Ga0163162_13299300	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300014157\|Ga0134078_10498399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300014968\|Ga0157379_10677675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300015164\|Ga0167652_1068167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300015373\|Ga0132257_101266776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300018422\|Ga0190265_11322088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300018466\|Ga0190268_10272532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300018469\|Ga0190270_11000562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300019377\|Ga0190264_12270968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300020018\|Ga0193721_1144282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300024224\|Ga0247673_1070894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300024246\|Ga0247680_1022496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300024426\|Ga0196960_10107661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300025321\|Ga0207656_10432802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300025907\|Ga0207645_10624100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300025910\|Ga0207684_10380638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1214	Open in IMG/M
3300025913\|Ga0207695_10965580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300025916\|Ga0207663_10410000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300025936\|Ga0207670_10604329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300025938\|Ga0207704_10015990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3843	Open in IMG/M
3300025944\|Ga0207661_10591595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300025944\|Ga0207661_11454951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300025981\|Ga0207640_10877262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300026089\|Ga0207648_10341320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1349	Open in IMG/M
3300026089\|Ga0207648_11710075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300026118\|Ga0207675_100530603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium → Janthinobacterium sp. CG3	1174	Open in IMG/M
3300026121\|Ga0207683_11274704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300026142\|Ga0207698_11849346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300026142\|Ga0207698_12024730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300026328\|Ga0209802_1242007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300026537\|Ga0209157_1342140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300026548\|Ga0209161_10090088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1874	Open in IMG/M
3300027986\|Ga0209168_10354859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300028721\|Ga0307315_10282171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300030510\|Ga0268243_1083882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300031164\|Ga0307502_10011634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1557	Open in IMG/M
3300031366\|Ga0307506_10076893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300032002\|Ga0307416_100814678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300032180\|Ga0307471_100014377	All Organisms → cellular organisms → Bacteria → Proteobacteria	5499	Open in IMG/M
3300034164\|Ga0364940_0195941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300034176\|Ga0364931_0235345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300034376\|Ga0334923_025922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1233	Open in IMG/M
3300034376\|Ga0334923_102152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.27%
Host-Associated	Host-Associated	29.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Plants	Host-Associated → Plants	29.73%
Aquatic	Environmental → Aquatic	3.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.71%
Sediment	Environmental → Aquatic → Sediment	1.80%
Floodplain	Environmental → Terrestrial → Floodplain	1.80%
Freshwater	Environmental → Aquatic → Freshwater	0.90%
Marine	Environmental → Aquatic → Marine	0.90%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.05%
Loam	Environmental → Terrestrial → Soil → Loam	15.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.80%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.80%
Ice	Environmental → Aquatic → Freshwater → Ice	0.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%
Sand	Environmental → Terrestrial → Soil → Sand	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.80%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.80%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	0.90%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.80%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Basal Ice	Environmental → Aquatic → Freshwater → Ice → Glacier → Basal Ice	0.90%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.90%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011007	Basal ice microbial communities from Matanuska glacier, Alaska, USA - MataB	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012035	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024426	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034376	Biocrust microbial communities from Mojave Desert, California, United States - 19HNC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_02056290	2199352024	Soil	IRDLIQPMCTRMAFAAGTRHQIESALETFWRLLEPPGDRKSQFRFVYREPFNDAMALLELYALSSGKHVDALRQWQAFAQKVKRGDGGEAPPPVAKKRRRRRN
JGI10216J12902_1197805731	3300000956	Soil	HQMEQALETFWRLLEPPSDRRAQFRAVYRDPFNDALALLELFALSSGRYIDVFRQWQAFAVRVKRAQEEVEGTVKKRRRRRRR*
Ga0055471_102878362	3300003987	Natural And Restored Wetlands	AAGTRHQIEQALETLWRLLEPPSDRRAQFRAVFREPFNDALALLELYALSSGRYVEIFRQWQAFALRAKKAQEEAEAPKKRRRRR*
Ga0063454_1002779432	3300004081	Soil	RMSLAAGTRHQIETALDTLWRLLEPPADRRAQFRFVYREPFNDALALLELYALSSGKYVDVFRQWQQFAQRARRAADVEAPKAPVKRRRRRR*
Ga0062592_1013132292	3300004480	Soil	RLLEPPADRRSQFRFVYRDPFNDALALLELYALSSGKHVDAFRQWQAFSQRVKRAEGAEGEEPAKAPAKKRRRRRS*
Ga0066672_108795341	3300005167	Soil	ILFIRELIQPICTRMSLAAGTRHQIETALDTLWRLLEPPADRRAQFRFVYREPFNDALALLELYALSSGKYVDVFRQWQQFAQRVRRAADAEAPKSPAKRRRRRR*
Ga0066679_107842672	3300005176	Soil	QPLVTRMSLSAGTRHQIEQTLETMWRLLELPTDKRASFRFVFREPFNDALALLELYALSSGRYIEQYRQWQAFAQRARRAADDAPAPPRKRRRGRRR*
Ga0066675_105014753	3300005187	Soil	PWIIDELEKEESRRDSKMRIAEVILFIRESIQPLCTRMALAAGTRHQIEQTLDTLWRLLEPPSERRAMFRFVFREPFNDALALLELYALSSGKAIEQYRQWHSFAQRARRASDEAAPPPRRKRRGRKR*
Ga0070683_1007501283	3300005329	Corn Rhizosphere	ALAAGTRHQFEQALETLWRLLEPPTDRRAQFRAVHREPFHDALALLELFALSSGKYVEQYRQWHAFALKAKREGEVAHAPVKRRRRRRH*
Ga0070683_1010134532	3300005329	Corn Rhizosphere	AGTRHQIEQALETLWRLLEPPSDRRSQMRFVYREPFNDALALLELFALSSGKYVEQYRQWQQFAQRVRRADEGAPKPAKRRRRRRG*
Ga0070689_1003590702	3300005340	Switchgrass Rhizosphere	DVIIFIRDLIQPLCTRLALAAGTRHQMETALETLWRLLEPPADRRSQFRFVYREPFNDALALLGLYALSSGRHVEVFRQWQSFAQKVRKSEGEETTPATRGRRRRKGR*
Ga0070691_104111571	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	ALEAEENRRTGAMKISDVILFIRDLIQPICVRMSLAAGTRHQIEQALETLWRLLEPPADKKAQFRFVFREPFNDALALLELYALSSGKYVDVFRQWASFAQKVKREGGELPATSPAKRRRRKRG*
Ga0070687_1012354992	3300005343	Switchgrass Rhizosphere	QIEQALETLWRLLEPPTDRRAQFRAVHREPFHDALALLELFALSSGKYVEQYRQWHAFALKAKREGEVAHAPVKRRRRRRH*
Ga0070687_1014683061	3300005343	Switchgrass Rhizosphere	RDAKMRIAEVIVFIRDLIQPLCVRMSLAAGTRHQIEQTLETLWRLLEMPNERRAMFRFVFREPFNDALALLELYALSSGRYIDQYRQWQAFAQRARRSAEEAPPLPKKRRRGRKR*
Ga0070709_116415461	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LFIRESIQPLCARMSLAAGTRHQIEQTLETLWRLLEMPNERRSMFRFVFREPFNDALALLELYALSSGRYIDQYRQWQAFAQRAKRATDEAAPQPVRRKRRGKRR*
Ga0070709_116872581	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRIGEVLVFIRDLIQAVCARMALPAGTRHQIEQALETLWRLLEPPSDRRSQFRFVYREPFDDALSLLELYALSSGKYVDVYRQWNAFAQRVKRTDGESKPATKHKRRRRRH*
Ga0066681_102632231	3300005451	Soil	VCTRMALAAGTRHHIEQTLETLWRLLEPPAEKRAMFRFVFREPFNDALALLELYALSSGRYVEHFKQWHSFAQRARRAGDEAPPPAKRRRRGKRR*
Ga0070678_1016430961	3300005456	Miscanthus Rhizosphere	ALETLWRLLEPPSDKRSQFRFVYREPFSDALALLELYALSSGKHVEVFRQWQVFAQKVKRAEGDDEAPRPTVKRRGRRRR*
Ga0068867_1006968182	3300005459	Miscanthus Rhizosphere	MLPWVVSELEREEHRRDSRMRIAEVLTFVRDLVQPLCARMALAAGTRHQIEQALETLWRLMEPPADRRAQFRAVHREPFADALALLELFALSSGKYVEQYRQWHAFAQKARREGEVAHAAPAKRRRRRRR*
Ga0070706_1013378241	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RIAEVLTFIRDLVQPLCARMALAAGTRHQIEQALETLWRLMEPPTDRRAQFRAVHREPFHDALALLELFALSSGKYVEQYRQWHAFAQKVKREGGEGAHAAPVKRRRRRRR*
Ga0070739_101964433	3300005532	Surface Soil	RHQIEQALETLWRLLEPPSDRRAQFRFVYREPFDDALALLELYALSSGKYVDVYRQWSSFAQRVKRAEEPRATKHHRRKRRRH*
Ga0070686_1015459951	3300005544	Switchgrass Rhizosphere	IQPVCARMALAAGTRHQIEQTLETLWRLLDVPSDRRVMFRFVYREPFNDALALFELFALSSGRYAEQFRAWQAFAQRVRKSEGEAPPVRKRKRRR*
Ga0066701_107600251	3300005552	Soil	GMRHQIELALETLWRLLEPPADRRSQFRFVYREPFSDALSLLELYALSSGKYIEVFRQWNAFAQRVKRAEGEAQPLPHRKRRRRR*
Ga0066704_110073591	3300005557	Soil	LPAGTRHQIEQALETLWRLLEPPADRRTQFRFVYREPFNDALALLELYALSSGKYVDVFRQWSSFAQRVKRAEGEENPPARRKRRRRH*
Ga0066698_103558831	3300005558	Soil	EELEQEEQRRHGRMRIGDVLVFIRDLIQPICARMALPAGMRHQIELALETLWRLLEPPADRRSQFRFVYREPFSDALSLLELYALSSGKYIEVFRQWNAFAQRVKRAEGEAQPLPHRKRRRRR*
Ga0066699_100112817	3300005561	Soil	RIAEVILFIRESIQPLCTRMALAAGTRHQIEQTLDTLWRLLEPPSERRAMFRFVFREPFNDALALLELYALSSGKAIEQYRQWHSFAQRARRASDEAAPPPRRKRRGRKR*
Ga0066699_112721131	3300005561	Soil	CARMALAAGTRHQIETALETLWRLLEPPADRRSQFRFVYRDPFNDALALLELYALSSGRFVDVFRQWQAFAQKVRRSEGEESPKPAVKRRRRRKG*
Ga0066702_106125311	3300005575	Soil	RESRMKIGEVILFIRELIQPICTRMSLAAGTRHQIETALDTLWRLLEPPADRRAQFRFVYREPFNDALALLELYALSSGKYVDVFRQWQQFAQRVRRAADAEAPKSPAKRRRRRR*
Ga0068857_1017714691	3300005577	Corn Rhizosphere	LAAGTRHQMEQALETFWRLLEPPSDRRAQFRAVYRDPFGDALALLELYALSSGRYVDVFREWQAFAVRVKRAQEEVEGTVKKRRRRRKRN*
Ga0068852_1015817471	3300005616	Corn Rhizosphere	AGTRHQIEQTLETLWRLLEPPTERRAMFRFVTRDPFNDALALLELYALSSGKYVDQFKQWQEFASRVHRANEEAAPPPRKRRRHRRKGN*
Ga0068852_1025854701	3300005616	Corn Rhizosphere	DVVIFIRDLIQPLCARMALAAGTRHQIETALETLWRLLEPPTDRRSQFRFVYREPFSDALALLELYALSSGKHVEVFRQWQAFAQKVKREGGDEAPARGPVKRRRRRSR*
Ga0068861_1013303323	3300005719	Switchgrass Rhizosphere	FIRDLIQPLCTRLALAAGTRHQMETALETLWRLLEPPADRRSQFRFVYREPFNDALALLELYALSSGRHVEVFRQWQSFAQKVRKSEGEETTPATRGRRRRKGR*
Ga0068861_1023577132	3300005719	Switchgrass Rhizosphere	HQIEQALETLWRLLEPPSDRRSQFRAVYREPFHDALALLELYALSSGRYVDVFRQWQTFAVRVKRAQEEAVDVKTPPRRPRRRRRR*
Ga0080026_102854971	3300005952	Permafrost Soil	MALAAGTRHQIEQAIETLWRLLEPPADRRAQFRFIYRDPFNDALALLELYALSSGKYVEQYKQWSAFSQKARKAQEEEEPPVKKRRRRRR*
Ga0066652_1007885222	3300006046	Soil	RHQIETALETLWRLLEPPADRRSQFKFVYREPFSDALALLELYALSSGLHVDVFRQWQAFAQKVRRAEGEESPKPAVKRRRRRKG*
Ga0070716_1002200501	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RMALAAGTRHQIEQTLETLWRLLELPNERRSMFRFVFREPFNDALALLELYALSSGRYIDQYRQWQAFAQRAKRATDEAAPQPVRRKRRGKRR*
Ga0068871_1005492571	3300006358	Miscanthus Rhizosphere	LFIRELIQPICTRMALAAGTRHQIETALDTLWRLLEPPADRRAQFKFVFREPFNDALALLELYALSSGKHVDAFRQWQQFAQRVRRAADAEAPKAPAKRRRRRR*
Ga0066658_107570021	3300006794	Soil	PLCARMALAAGTRHQIETALETLWRLLEPPADRRSQFRFVYREPFNDALALLELYALSSGRFVDVFRQWQAFAQKVRRSEGEESPKPAVKRRRRRKG*
Ga0066659_106949011	3300006797	Soil	ELIQPICARMSLPAGTRHQIEQALETLWRLLEPPADRRTQFRFVYREPFNDALALLELYALSSGKYVDVFRQWSSFAQRVKRAEGEANPPARRKRRRRH*
Ga0066659_115348401	3300006797	Soil	ILFIRELIQPLCTRMALAAGTRHHIEQTLETLWRLLEMPNEKRAMFRFVFREPFNDALALLELYALSSGRYIEQYRQWQAFAQRARRAADDAPAPPRKRRRGRRR*
Ga0066660_106724173	3300006800	Soil	FIRELIQPICARMSLPAGTRHQIEQALETLWRLLEPPADRRTQFRFVYREPFNDALALLELYALSSGKYVDVFRQWSSFAQRVKRAEGEENPPARRKRRRRH*
Ga0075434_1009523371	3300006871	Populus Rhizosphere	WVMEELEAEEKRRDGRMRLTDVLIFIRDLIQPLCVRLALAAGTRHQIEQALETLWRLLEPPNERRAMFRFVYRDPFNDALALLELYALSSGRYIDQFRQWQAFANRVRRAEGEAAPAPKRRRRKR*
Ga0075435_1000338981	3300007076	Populus Rhizosphere	LWRLLEPPTDRRAQFKAVFREPFNDALALFELFALSSGRYLDVFRQWQQFAQRVRRAQEEAPPTTVRRRRRRR*
Ga0075435_1017077282	3300007076	Populus Rhizosphere	GRMRIGEVLVFIRDLIQPLCARMALPAGTRHQIEQALETLWRLLEPPADRRAQFRFIYREPFNDALALLELYAFSSGKYVDVFRQWQSFAQRVKRSEGEAPRPVRRRRRRR*
Ga0099791_101264011	3300007255	Vadose Zone Soil	VFIRDLIQPICARMALPAGTRHQIEQALETLWRLLEPPADRRSQFRFVYREPFHDALALLEIYAFSSGKYIDVFRQWQTFAQRVRRAEGEAPQRPRRRRKRS*
Ga0066710_1044773971	3300009012	Grasslands Soil	PVCARMALPAGMRHQIEQALETLWRLLEPPTDRRAQFRFVYREPFSDALSLLELYALSSGKYVDVFRQWQSFAQRVKKAEPPARPRRRRRRR
Ga0099827_101206391	3300009090	Vadose Zone Soil	DLIQPLCARMALPAGTRHQIEQALETLWRLLEPPVDRRAQFRFIYREPFNDALALLELYAFSSGKYVDVFRQWQSFAQRVKRSEGEAPRPVRRRRRRR*
Ga0105240_112524982	3300009093	Corn Rhizosphere	PWIIEELEREEGRHDGRMRLGEVLIFIRDLIQPLCARMALPAGTRHQMEQTLETLWRLLEPPTERRAMFRFVFREPFNDSLALLELYALSSGRYVEQLREWQSFSERVKRSQGEGEAESQPPRRKRRRRR*
Ga0105245_120897971	3300009098	Miscanthus Rhizosphere	QPLCTRMALAAGTRHHIEQTLETLWRLLEMPNERRAMFRFVFREPFNDALALLELYALSSGRYIDQYRQWQAFAQRARRSAEEAPPLPKKRRRGRKR*
Ga0105242_111408251	3300009176	Miscanthus Rhizosphere	MRIGEVLTFVRDLVQPLCARMSLAAGTRHQIEQALETLWRLMEPPADRRAQFRAVHREPFADALALLELFALSSGKYVEQYRQWHAFAQKARREGEVAHAAPAKRRRRRRR*
Ga0105248_122627792	3300009177	Switchgrass Rhizosphere	DLIQPICARMALAAGTRHQIEQTLETLWRLLDVPSDRRAMFRFVYREPFNDALALFELFAISSGRYVEQFRAWQAFAQRVRKSEGETPPVRKRKRRR*
Ga0105248_125661181	3300009177	Switchgrass Rhizosphere	EVILFIRELIQPMCTRMALAAGTRHQIETALDTLWRLLEPPADRKAQIRFVYREPFNDALALLELYALSSGKHVEVFRQWQQFAQRARHAADHDAPIASAKRRRRRR*
Ga0105854_10961021	3300009660	Permafrost Soil	MRIGEVLIFVRDLTTPICARMALAAGTRHQIEQAIETLWRLLEPPADRRAQFRFIYRDPFNDALALLELYALSSGKYVEQYKQWSAFSQKARKAQEEEEPPVKKRRRRRR*
Ga0126313_116376922	3300009840	Serpentine Soil	MRIGEVIVFIRELITPLCARMALPAGTRHQMEQALETLWRLLEPPNDRRAQFRAVYREPFSDALSLLELYALSSGRYVDVFRQWQAFAQRVRRAQEEGEAATKTRRRR
Ga0134127_123312741	3300010399	Terrestrial Soil	RRESRMRIGEVLVFIRDLIQPVCARMSLAAGNRHQIEQALETLWRLLEPPTDRRAQFRFVYREAFNDALALLELFALSSGKYIEQYRQWHAFAQRVRNAQAESAPVAKKRRRRRR*
Ga0134121_131840081	3300010401	Terrestrial Soil	RMALAAGTRHQIETALETLWRLLEPPADRRSQFRFVYREPFSDALALLELYALSSGRHVEVFRQWQAFAQKVRRADGEESPKPAVKRRRRRKG*
Ga0139299_10689882	3300011007	Basal Ice	HQIEQALETLWRLLEPPADRRSQFRAVHREPFSDALALLELYAYSSGKYLDTFLQWQEFSTRVRRGIEEAAPAPKKKRRRR*
Ga0105246_102794732	3300011119	Miscanthus Rhizosphere	LFIRELIQPMCTRMALAAGTRHQIETALDTLWRLLEPPADKRAQFKFVYREPFNDALALMELYALSSGKHVDVFRQWQQFAQRARHAADHDAPIASAKRRRRRR*
Ga0137392_112791032	3300011269	Vadose Zone Soil	EQTLETLWRLLEMPNEKRAMFRFVFREPFNDALALLELYALSSGRYVEQYRQWQSFAQRARRAADDAPPPPRKRRRGRRR*
Ga0137393_108871741	3300011271	Vadose Zone Soil	AGRESRMKISEVVLFIRDLIQPMCTRLALAAGTRHQIETALDTLWRLLEPPTDRRAQFKFVYREPFNDALALLELYALSSGKHVDAFRQWQQFAQRVRRAADAEAPPAATKRRRRHR*
Ga0137448_11249121	3300011427	Soil	QIETALETLWRLLEPPADRRSQFRFVYRDPFNDALALLELYALSSGKHIEAFRQWQAFALRVKRAEGEEPKKAPAKKRRRRRG*
Ga0120118_10096854	3300012010	Permafrost	IMEELEREEQRREARMRMGEVLIFIRDLTQPICARMALAAGTRHQIEQAIETLWRLLEPPTDRRAQLRYIYREPFNDALALLELYALSSGKYVEQYKQWNLFAQRARKAQQDADPPVKKRRRRRR*
Ga0137445_10202193	3300012035	Soil	ALETLWRLLEPPADRRSQFRFVYRDPFNDALALLELYALSSGKHIEAFRQWQAFALRVKRAEGEEPKKAPAKKRRRRRG*
Ga0137389_102160761	3300012096	Vadose Zone Soil	MMRIGEVLVFIRDLIQPICARMALPAGTRHQIEQALETLWRLLEPPADRRSQFRFVYREPFHDALALLEIYAFSSGKYIDVFRQWQTFAQRVRRAEGEAPQRPRRRRKRS*
Ga0164300_110564061	3300012951	Soil	LIQPICTRMALAAGTRHQIEQTLETLWRLLETPTDRRAMCRFVYREPFNDALALLELYALSSGKYVDVFRQWQQFAQRARRAADVDAPRPATKRRRRRR*
Ga0164298_106336502	3300012955	Soil	GTRHQIEQALETLWRLLEPPSDRRAQFRFVYREPFNDALALLELFALSSGKYVEQYRHWQSFAVKVRKSQEESGPPVKKRRRRRR*
Ga0164306_107841881	3300012988	Soil	TRMALAAGTRHQIEQTLETLWRLLEPPAERRAMIRFVLREPFNDALALLELYALSSGKYVEQFKQWREFTNRVHGANEEATPPTPRKRRRHRRKG*
Ga0163162_132993002	3300013306	Switchgrass Rhizosphere	ETLWRLLEAPSDRRSQIRFVYREPFNDALALLELYALSSGRYIDQYRQWQAFAQRARRSAEEAPPLPKKRRRGRKR*
Ga0134078_104983992	3300014157	Grasslands Soil	MALAAGTRHQIETALETLWRLLEPPADRRSQFRFVYREPFSDALALLELYALSSGRHVDVFRQWQAFAQKVRRAEGEESPKPAVKRRRRRKG*
Ga0157379_106776752	3300014968	Switchgrass Rhizosphere	SELEREEHRRDSRMRIAEVLTFVRDLVQPLCARMALAAGTRHQIEQALETLWRLMEPPTDRRAQFRAVHREPFNDALALLELFALSSGKYIEQYRQWHAFAQKAKREGDVAHAASPVKRRRKRRR*
Ga0167652_10681671	3300015164	Glacier Forefield Soil	MSLAAGTRHQIETALDTLWRLLEPPTDRRAQFRFVYREPFNDALALLELYALSSGKYVDVFRQWQQFAQKVRRAADADAPKAPVKRRRRRH*
Ga0132257_1012667762	3300015373	Arabidopsis Rhizosphere	FIRDLIQPICARMALAAGTRHQIEQTLETLWRLLDVPSDRRAMFRYVYREPFNDALALFELFALSSGRYVEQFRAWQAFAQRVRKSEGDAPPVRKRKRRR*
Ga0190265_113220881	3300018422	Soil	RRGAAGEDEIELAPDHGEDTPRMRLGEVLIFIRDLIQPICARLSLAAGTRHQMEQALETFWRLLEPPSDRRAQFRAVYRDPFNDALALLELYALSSGRYVDVFRQWQAFAVRVKRAQEEVEGTVKKRRRRRRH
Ga0190268_102725321	3300018466	Soil	QMEQALETLWRLLEPPNDRRAQFRAAVREPFNDALALLELYALSSGRYVDVFRQWQAFAVRVKRAQEEGEGGPKKPRRRRKRR
Ga0190270_110005621	3300018469	Soil	FIRDLIQPICARLALAAGTRHQMEQALETFWRLLEAPSDRRAQFRAVYRDPFNDALALLELYALSSGRYVDVFRQWQAFAVRVKRAQEEVEGTVKKRRRRRRH
Ga0190264_122709681	3300019377	Soil	EAEEKRRGTTESEEAARMRLGEVLLFIRDLIQPLCARLALAAGTRHQMEQALETFWRLLEPPSDRRAQFRAVNRDPFNDALALLELYALSSGKYVDGFRQWQAFAVRVKRAQEEVEGTVKKRRRRKRH
Ga0193721_11442821	3300020018	Soil	IRELIQPMCTRMALAAGTRHQIETALDTLWRLLEPPVDRRAQIRFVFREPFNDALALLELYALSSGKYIEVFRQWREFAQRARHITDAEAPLPSAKRRRRRR
Ga0247673_10708942	3300024224	Soil	RRESRMKIGEVILFIRELIQPMCTRMALAAGTRHQIETALDTLWRLLEPPADKRAQFKFVYRDPFNDALALLELYALSSGKYVDVFRQWQQFAQRVRHAADDDAPSPAAKRRRRKR
Ga0247680_10224961	3300024246	Soil	TALDTLWRLLEPPVDRKAQIRFVFREPFNDALALLELYALSSGKYVEVFRQWREFAQRARRVADSEATPLPSAKRRRRRR
Ga0196960_101076612	3300024426	Soil	VLDEIEDEEGRRQARMKIGEVIVFIRELITPLCARMALPAGTRHQMEQALETLWRLLEPPNDRRAQFRAAVREPFNDALALLELYALSSGRYVDVFRQWQAFAVRVKRAQEEGEGGARKPRRRRKRR
Ga0207656_104328021	3300025321	Corn Rhizosphere	RMSLAAGTRHQIETALDTLWRLLEPPSDRRAQFRFVYREPFNDALALLELYALSSGKYVDVFRQWQQFAQRVRRAADAEAPRPATKRRRRRR
Ga0207645_106241001	3300025907	Miscanthus Rhizosphere	SVLLLPWVIEELEKEGTHRDARMRIGEVTIFIRDLIQPICARMALAAGTRHQIEQTLETLWRLLDLPSDRRAMFRFVYREPFNDALALFELFAISSGRYVEQFRAWQAFAQRVRKSEGEAPPVRKRKRRR
Ga0207643_108649831	3300025908	Miscanthus Rhizosphere	LETLWRLLEPPADRRAQFRAVHREPFADALALLELFALSSGKYVEQYRQWHAFAQKAKREGDGPAAGPVKRRRRRRR
Ga0207684_103806382	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RIAEVLTFIRDLVQPLCARMALAAGTRHQIEQALETLWRLMEPPTDRRAQFRAVHREPFHDALALLELFALSSGKYVEQYRQWHAFAQKVKREGGEGAHAAPVKRRRRRRR
Ga0207695_109655801	3300025913	Corn Rhizosphere	HDGRMRLGEVLIFIRDLIQPLCARMALPAGTRHQMEQTLETLWRLLEPPTERRAMFRFVFREPFNDSLALLELYALSSGRYVEQLREWQSFSERVKRSQGEGEAESQPPRRKRRRRR
Ga0207663_104100001	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LPWIIEELEREEAQRDTKMRIGEVIVFIREMIQPLCTRMALAAGTRHQIEQTLDTLWRLLEPPTERRAMFRFVFREPFNDALALLELYALSSGKYVEQYRQWQAFAQRARRAGDDAPPPPRKRRRGRRR
Ga0207670_106043291	3300025936	Switchgrass Rhizosphere	LPWVMEELDQEEKRRAAKMRISELIIYIRDQIQPLCARMALAAGTRHQIEQALETLWRLLEPPSDRRSQFRAVYRDPFNDALALLELYALSSGQHIEVFREWQAFAQRVKRAQQEVADTTDAPKRRRRKRR
Ga0207704_100159901	3300025938	Miscanthus Rhizosphere	WVVSELEREEHRRDSRMRIAEVLTFVRDLVQPLCARMALAAGTRHQIEQALETLWRLLEPPADRRAQFRAVHREPFADALALLELFALSSGKYVEQYRQWHAFAQKARREGEGPAAGPVKRRRRRRR
Ga0207661_105915951	3300025944	Corn Rhizosphere	EERRSARMKIGDVIVFIRDLIQPLCARMALAAGTRHQFEQALETLWRLLEPPTDRRAQFRAVHREPFHDALALLELFALSSGKYVEQYRQWHAFALKAKREGEVAHAPVKRRRRRRH
Ga0207661_114549511	3300025944	Corn Rhizosphere	MSLAAGTRHQIEQALETLWRLLEPPSDRRSQMRFVYREPFNDALALLELFALSSGKYVEQYRQWQQFAQRVRRADEGAPKPAKRRRRRRG
Ga0207640_108772621	3300025981	Corn Rhizosphere	QIETALDTLWRLLEPPTDRRAQFRFVYREPFNDALALLELYALSSGKYVDVFRQWQQFAQRVRRAADAETPKAPAKRRRRRR
Ga0207648_103413201	3300026089	Miscanthus Rhizosphere	MSLAAGTRHQIEQALETLWRLMEPPADRRAQFRAVHREPFADALALLELFALSSGKYVEQYRQWHAFAQKARREGEVAHAAPAKRRRRRRR
Ga0207648_117100752	3300026089	Miscanthus Rhizosphere	RDSRMRIAEVLTFVRDLVQPLCARMALAAGTRHQIEQALETLWRLLEPPADRRAQFRAVHREPFADALALLELFALSSGKYVEQYRQWHAFAQKARREGEGPAAGPVKRRRRRRR
Ga0207675_1005306032	3300026118	Switchgrass Rhizosphere	MLVQTRCFSSDVIIFIRDLIQPLCTRLALAAGTRHQMETALETLWRLLEPPADRRSQFRFVYREPFNDALALLELYALSSGRHVEVFRQWQSFAQKVRKSEGEETTPATRGRRRRKGR
Ga0207683_112747041	3300026121	Miscanthus Rhizosphere	IFIRDLIQPLCTRMALAAGTRHQIETALETLWRLLEPPSDKRSQFRFVYREPFSDALALLELYALSSGKHVEVFRQWQVFAQKVKRAEGDDEAPRPTVKRRGRRRR
Ga0207698_118493462	3300026142	Corn Rhizosphere	MRIGEVIVFIRDSIQPLCTRMALAAGTRHQIEQTLETLWRLLEPPTERRAMFRFVTRDPFNDALALLELYALSSGKYVDQFKQWQEFASRVHRANEEAAPPPRKRRRHRRKGN
Ga0207698_120247301	3300026142	Corn Rhizosphere	RRDSRMRIGEVLTFIRDLVQPLCARMALAAGTRHQIETALETLWRLLEPPTDRRSQFRFVYREPFSDALALLELYALSSGKHVEVFRQWQAFAQKVKREGGDEAPARGPVKRRRRRSR
Ga0209802_12420071	3300026328	Soil	AGMRHQIELALETLWRLLEPPADRRSQFRFVYREPFSDALSLLELYALSSGKYIEVFRQWNAFAQRVKRAEGEAQPLPHRKRRRRR
Ga0209157_13421401	3300026537	Soil	VIDEIENEERRRHGRMRIGEVLVFIRELIQPICARMVLPAGTRHQIEQALETLWRLLEPPTDRRSQFRFVYREPFHDALSLLELYAHSSGKYVDVYRQWNSFAQRVKRAEGEAAAPVRRRKRRRR
Ga0209161_100900881	3300026548	Soil	IEELEDEEERRHGRMRIVEVLVFIRELIQPICARMSLPAGTRHQIEQALETLWRLLEPPADRRTQFRFVYREPFNDALALLELYALSSGKYVDVFRQWSSFAQRVKRAEGEENPPARRKRRRRH
Ga0209168_103548591	3300027986	Surface Soil	PWVMDELEAEEHRRSGRMRIGEVLVFIRDLIQTICARMALPAGTRHQIEQALETLWRLLEPPADRRSQFRFVYREPFDDALALLELYALSSGKHVDVYRQWNAFAQRVKRAYGEPQTVKQHRRKRRRH
Ga0307315_102821712	3300028721	Soil	VFDELEREESTRDGRMRVGEVVIFIRDLIQPLCARMALAAGTRHQIEQALETLWRLLEPPSEKRAMFRFVYREPFADALALLELYALSSGKYVDIFRQWQTFASKAKREEAPAVAPKKRRRRRK
Ga0268243_10838821	3300030510	Soil	IPYIREQIQPLCARMALAAGTRHQIEQAIETLWRLLEPPSDRRSQFRAVYREPFNDALALLELYALSSGRHIDVFREWQAFAVRVKRAQQEVAETAPKRRRRRRR
Ga0307502_100116342	3300031164	Soil	RHQMEQALETFWRLLEPPSDRRAQFRAVYRDPFGDALALLELYALSSGRYVDVFRQWQAFAVRVKRAQEEVEGTVKKRRRRKRR
Ga0307506_100768932	3300031366	Soil	ALDTLWRLLEPPVDRKAQIRFVFREPFNDALALLELYALSSGKHIEVFRLWREFAQRARRVAEDSDSAPLPSAKRRRRRR
Ga0307416_1008146782	3300032002	Rhizosphere	ELEKEQSRRETRMRIGEVMLFIRELIQPLCARMALAAGTRHHIEQALETLWRLLEPPTDRRAQLRFVYREPFSDAMSLLELYALSSGRYVEQFHQWNNIAQRLRKADEHVPTARRRRRRR
Ga0307471_1000143779	3300032180	Hardwood Forest Soil	WILQELEREEARRESRMKIGEVILVIRELIQPMCTRMSLAAGTRHQIETALDTLWRLLEPPTDRRAQFKFVYREPFSDALALLELYALSSGKHVDAFRQWQQFAQRVRRAADAEAPAATTKRKRRHR
Ga0364940_0195941_240_566	3300034164	Sediment	MRIGEVILFIRELIQPICARMALAAGTRHHIEQTLETLWRLLEPPADRRAMFRFVYREPFNDALALLELYALSANRHVEQFQQWQAFAQRVRRAEGEAPPSRKRRRKR
Ga0364931_0235345_203_589	3300034176	Sediment	MLPWLIEELEKENNRRDTRMRIADVVIFIRELIQPICARMTLAAGTRHQIEQALETLWRLLEPPTDRRAQFRFVYREPFNDALALLELYALSSGRYVEQYRHWQSFAQRIRKSQEDSPAPRKRKRRRR
Ga0334923_025922_3_335	3300034376	Hypolithic Biocrust	TTDVILFIRELIQPLCARMALSAGTRHQIEQALETLWRLLEPPTDRRSQFRAVYREPFSDALALLELYALSSGRYVDVFRQWQAFAVRVKRAQEEGAGAPSAKRRRRRRR
Ga0334923_102152_213_593	3300034376	Hypolithic Biocrust	VIEELETEESRRDSRMRIGEVVPFIRDLIQPICARMALAAGTRHQIEQALETLWRLLEPPSDRRSQFRAVHREPFNDALALLELYALSSGRHVDTFRQWQQFAQKVKRAEGEVGATPRRRRRKRKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086100

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences