Metagenome Family F086137

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086137
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	76 residues
Representative Sequence	PGAGGKQTLGLLYSQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFGKHYGDTSSRYFKDASTYLPFLKA
Number of Associated Samples	99
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.83 %
% of genes near scaffold ends (potentially truncated)	96.40 %
% of genes from short scaffolds (< 2000 bps)	94.59 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.955 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.919 % of family members)
Environment Ontology (ENVO)	Unclassified (38.739 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.153 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 35.24% β-sheet: 0.00% Coil/Unstructured: 64.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00571	CBS	4.50
PF03781	FGE-sulfatase	2.70
PF02163	Peptidase_M50	2.70
PF13540	RCC1_2	2.70
PF00072	Response_reg	1.80
PF13683	rve_3	1.80
PF13795	HupE_UreJ_2	0.90
PF01757	Acyl_transf_3	0.90
PF01068	DNA_ligase_A_M	0.90
PF00494	SQS_PSY	0.90
PF05746	DALR_1	0.90
PF00226	DnaJ	0.90
PF02585	PIG-L	0.90
PF00873	ACR_tran	0.90
PF00353	HemolysinCabind	0.90
PF00080	Sod_Cu	0.90
PF01609	DDE_Tnp_1	0.90
PF03971	IDH	0.90
PF04264	YceI	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	2.70
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.90
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	0.90
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.90
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	0.90
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.90
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.90
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.90
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.90
COG2838	Monomeric isocitrate dehydrogenase	Energy production and conversion [C]	0.90
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.90
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.90
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.90
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.90
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.90
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.95 %
Unclassified	root	N/A	40.54 %
Polyangium	genus	Polyangium	4.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.95 %
Unclassified	root	N/A	40.54 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	4.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.95 %
Unclassified	root	N/A	40.54 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	4.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.74 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	4.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	28.83 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	4.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	28.83 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	4.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	27.03 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	4.50 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	15.32 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	4.50 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	2.70 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.90 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	14.41 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	4.50 %
Vulgatibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Vulgatibacteraceae	1.80 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	0.90 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	0.90 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.90 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	13.51 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	4.50 %
Vulgatibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Vulgatibacteraceae → Vulgatibacter	1.80 %
unclassified Aquisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera	0.90 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	0.90 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.90 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	0.90 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	13.51 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	4.50 %
Vulgatibacter incomptus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Vulgatibacteraceae → Vulgatibacter → Vulgatibacter incomptus	1.80 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.90 %
Aquisphaera sp. JC669	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	0.90 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	0.90 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	0.90 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_120946374	Not Available	793	Open in IMG/M
3300004157\|Ga0062590_101167121	Not Available	748	Open in IMG/M
3300004157\|Ga0062590_101692111	Not Available	644	Open in IMG/M
3300004463\|Ga0063356_100313129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	1955	Open in IMG/M
3300004463\|Ga0063356_100590143	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1498	Open in IMG/M
3300004480\|Ga0062592_100552055	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300005184\|Ga0066671_10925359	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	551	Open in IMG/M
3300005290\|Ga0065712_10820737	Not Available	506	Open in IMG/M
3300005329\|Ga0070683_102388598	Polyangium → Polyangium aurulentum	507	Open in IMG/M
3300005330\|Ga0070690_100383008	All Organisms → cellular organisms → Bacteria → Proteobacteria	1029	Open in IMG/M
3300005332\|Ga0066388_108466780	Not Available	512	Open in IMG/M
3300005333\|Ga0070677_10591736	Not Available	613	Open in IMG/M
3300005335\|Ga0070666_11271626	Not Available	549	Open in IMG/M
3300005337\|Ga0070682_100864016	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	740	Open in IMG/M
3300005340\|Ga0070689_100400230	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300005340\|Ga0070689_100732281	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300005341\|Ga0070691_10877405	Not Available	552	Open in IMG/M
3300005343\|Ga0070687_100048991	Not Available	2175	Open in IMG/M
3300005353\|Ga0070669_101235981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	646	Open in IMG/M
3300005354\|Ga0070675_100209277	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1695	Open in IMG/M
3300005354\|Ga0070675_100438418	Not Available	1170	Open in IMG/M
3300005365\|Ga0070688_101705924	Not Available	516	Open in IMG/M
3300005367\|Ga0070667_100215528	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Vulgatibacteraceae → Vulgatibacter → Vulgatibacter incomptus	1708	Open in IMG/M
3300005367\|Ga0070667_100282414	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300005441\|Ga0070700_100431122	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	998	Open in IMG/M
3300005458\|Ga0070681_10645176	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005466\|Ga0070685_10406949	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300005467\|Ga0070706_101427563	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005535\|Ga0070684_101299767	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005548\|Ga0070665_100365344	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Vulgatibacteraceae → Vulgatibacter → Vulgatibacter incomptus	1450	Open in IMG/M
3300005564\|Ga0070664_100914114	Not Available	823	Open in IMG/M
3300005616\|Ga0068852_102045056	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005764\|Ga0066903_103511830	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	845	Open in IMG/M
3300005836\|Ga0074470_10255340	Polyangium → Polyangium aurulentum	668	Open in IMG/M
3300006031\|Ga0066651_10563399	Not Available	604	Open in IMG/M
3300006169\|Ga0082029_1431040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	2865	Open in IMG/M
3300006237\|Ga0097621_101122702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	739	Open in IMG/M
3300006881\|Ga0068865_100650466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	896	Open in IMG/M
3300006904\|Ga0075424_101991609	Not Available	613	Open in IMG/M
3300009148\|Ga0105243_12145294	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	595	Open in IMG/M
3300009156\|Ga0111538_12673901	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	626	Open in IMG/M
3300009176\|Ga0105242_10555741	Not Available	1101	Open in IMG/M
3300009176\|Ga0105242_11561050	Not Available	693	Open in IMG/M
3300010397\|Ga0134124_11290658	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300010403\|Ga0134123_11012313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	847	Open in IMG/M
3300010403\|Ga0134123_12586165	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300011423\|Ga0137436_1105409	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	745	Open in IMG/M
3300011432\|Ga0137428_1045334	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300011441\|Ga0137452_1149881	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	784	Open in IMG/M
3300012356\|Ga0137371_11346603	Not Available	526	Open in IMG/M
3300012892\|Ga0157294_10168963	Not Available	622	Open in IMG/M
3300012896\|Ga0157303_10296951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	514	Open in IMG/M
3300012904\|Ga0157282_10428241	Not Available	503	Open in IMG/M
3300012910\|Ga0157308_10251023	Not Available	624	Open in IMG/M
3300012943\|Ga0164241_10824344	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300012958\|Ga0164299_10490500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	814	Open in IMG/M
3300012961\|Ga0164302_10535027	Not Available	835	Open in IMG/M
3300012986\|Ga0164304_10949877	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	676	Open in IMG/M
3300012989\|Ga0164305_11558595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	588	Open in IMG/M
3300013307\|Ga0157372_13141942	Not Available	527	Open in IMG/M
3300014968\|Ga0157379_11329497	Not Available	695	Open in IMG/M
3300015200\|Ga0173480_11111014	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	528	Open in IMG/M
3300015371\|Ga0132258_12650692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1251	Open in IMG/M
3300015371\|Ga0132258_13847779	Not Available	1021	Open in IMG/M
3300015372\|Ga0132256_102498756	Polyangium → Polyangium aurulentum	618	Open in IMG/M
3300015372\|Ga0132256_103890589	Not Available	502	Open in IMG/M
3300017792\|Ga0163161_11728078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	555	Open in IMG/M
3300018081\|Ga0184625_10543556	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300018433\|Ga0066667_11103763	All Organisms → cellular organisms → Bacteria → Proteobacteria	687	Open in IMG/M
3300018465\|Ga0190269_11322720	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	578	Open in IMG/M
3300018920\|Ga0190273_12296098	Not Available	510	Open in IMG/M
3300019377\|Ga0190264_10629970	Not Available	773	Open in IMG/M
3300020005\|Ga0193697_1081368	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300020016\|Ga0193696_1050277	Not Available	1100	Open in IMG/M
3300021339\|Ga0193706_1123701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	704	Open in IMG/M
3300023069\|Ga0247751_1049568	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300024186\|Ga0247688_1097171	Not Available	509	Open in IMG/M
3300024224\|Ga0247673_1019962	Not Available	892	Open in IMG/M
3300024232\|Ga0247664_1024697	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300024275\|Ga0247674_1015442	Not Available	874	Open in IMG/M
3300024325\|Ga0247678_1045271	Not Available	706	Open in IMG/M
3300025903\|Ga0207680_10452790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	911	Open in IMG/M
3300025912\|Ga0207707_10492065	All Organisms → cellular organisms → Bacteria → Proteobacteria	1047	Open in IMG/M
3300025926\|Ga0207659_10080448	All Organisms → cellular organisms → Bacteria	2407	Open in IMG/M
3300025926\|Ga0207659_11468601	Not Available	584	Open in IMG/M
3300025930\|Ga0207701_10919845	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	732	Open in IMG/M
3300025934\|Ga0207686_10790766	Not Available	760	Open in IMG/M
3300025938\|Ga0207704_10650873	Polyangium → Polyangium aurulentum	868	Open in IMG/M
3300025938\|Ga0207704_11450873	Not Available	588	Open in IMG/M
3300025945\|Ga0207679_11689176	Not Available	580	Open in IMG/M
3300025960\|Ga0207651_10645047	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	929	Open in IMG/M
3300025961\|Ga0207712_11920945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	530	Open in IMG/M
3300025981\|Ga0207640_11962013	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300026023\|Ga0207677_12248276	Polyangium → Polyangium aurulentum	507	Open in IMG/M
3300026075\|Ga0207708_10946237	Not Available	747	Open in IMG/M
3300027878\|Ga0209181_10058359	All Organisms → cellular organisms → Bacteria	3998	Open in IMG/M
3300028577\|Ga0265318_10247696	Not Available	650	Open in IMG/M
3300028885\|Ga0307304_10578891	Not Available	519	Open in IMG/M
3300031198\|Ga0307500_10167630	Not Available	637	Open in IMG/M
3300031226\|Ga0307497_10606603	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	554	Open in IMG/M
3300031538\|Ga0310888_10066938	All Organisms → cellular organisms → Bacteria → Proteobacteria	1736	Open in IMG/M
3300031562\|Ga0310886_10461088	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	760	Open in IMG/M
3300031595\|Ga0265313_10252063	Not Available	719	Open in IMG/M
3300031716\|Ga0310813_12270837	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	514	Open in IMG/M
3300032002\|Ga0307416_100915044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	978	Open in IMG/M
3300032003\|Ga0310897_10060611	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300032828\|Ga0335080_11867600	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300034354\|Ga0364943_0359294	Not Available	558	Open in IMG/M
3300034690\|Ga0364923_0166969	Not Available	580	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.16%
Host-Associated	Host-Associated	37.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.76%
Plants	Host-Associated → Plants	37.84%
Aquatic	Environmental → Aquatic	5.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.81%
Sediment	Environmental → Aquatic → Sediment	4.50%
Floodplain	Environmental → Terrestrial → Floodplain	1.80%
Freshwater	Environmental → Aquatic → Freshwater	0.90%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.12%
Loam	Environmental → Terrestrial → Soil → Loam	15.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.80%
Ice	Environmental → Aquatic → Freshwater → Ice	0.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.80%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.31%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.60%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.80%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.90%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.90%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027878	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes)	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1209463741	3300000956	Soil	LATVLRAMGLPPSEFERWGHKGYGVPSLTGEDWTPPYRQHYESTSSRYFQMASDVLPMLGA*
Ga0062590_1011671211	3300004157	Soil	DPGAGGKQTLGLLYSQWLATVLETMGVPTSEFERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFMNASTALPFLKV*
Ga0062590_1016921112	3300004157	Soil	LGLLYSQWLATVLQTMGVPPSEFERWGTKGYGYPFITKESWTPPFAKHYGDTSSRYFTNASTILPFLKAP*
Ga0063356_1003131293	3300004463	Arabidopsis Thaliana Rhizosphere	VLQAMGVPPTEFERWGHKGYGVPYITKESWTPPFAKHYGNTTSRYFTMASDFLPFLKKA*
Ga0063356_1005901433	3300004463	Arabidopsis Thaliana Rhizosphere	LYSQWLATVLQTMGVPPSEFERWGYKGYGYPFITKESWTPPFGKHYGTTSSRYFTDASTYLPFLKA*
Ga0062592_1005520553	3300004480	Soil	TMGVPPSEYERWGYKGYGYPFITKESWTPPFGKHYGDTSSRYFQAASDWLPFLKAA*
Ga0066671_109253591	3300005184	Soil	AGQLKTGLLCDYRRMGNTASQYDPGAGGKQTLGLLYSQWLATVLQAMGVPPSEYERWGYKGYGYPFVTKETWTPPFAKHYGDTSSRYFQDASKPLPFLT*
Ga0065712_108207372	3300005290	Miscanthus Rhizosphere	SQWLATVLQTMGVPPSEFERWGTKGYGYPFITKESWTPPFAKHYGDTSSRYFTNASTILPFLKPA*
Ga0070683_1023885981	3300005329	Corn Rhizosphere	DPGAGGKQTLGLLYSQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKGA*
Ga0070690_1003830082	3300005330	Switchgrass Rhizosphere	SGSTYDPGAGGKQTLGLLYNQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKGA*
Ga0066388_1084667802	3300005332	Tropical Forest Soil	AGRLKTGLLCDYRRMGNSGSTYDPGAGGKQTLGLPYSQWLATVLQTMGVPPSEFERWGTKGYGYPYITKESWTPPFAKHYGDTSSRYFQDASKILPFLQA*
Ga0070677_105917361	3300005333	Miscanthus Rhizosphere	SEYTPDGGSKQVLGLLYSQWLATVLQSMGVPPTEFERWDHKGYGVPYLGTVDWGPPFKSHYTSTTSRYFTDASTILPFVKA*
Ga0070666_112716261	3300005335	Switchgrass Rhizosphere	STYDPGAGGKQTLGLLYSQWLATVLETMGVPTSEFERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFMNASTALPFLKV*
Ga0070682_1008640161	3300005337	Corn Rhizosphere	KSSEYDPGAGGKQVLGVLYAQWLATVLQAMGVPPSDYERWGHKGYGVPYVGTVDWGPPFKSHYGDTSSRYFADSSKILAFLQA*
Ga0070689_1004002302	3300005340	Switchgrass Rhizosphere	AGGKQTLGLLYNQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKGA*
Ga0070689_1007322812	3300005340	Switchgrass Rhizosphere	KQTLGLLYNQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKV*
Ga0070691_108774052	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	QWLATVLQAMGVPASEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKV*
Ga0070687_1000489911	3300005343	Switchgrass Rhizosphere	NQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKV*
Ga0070669_1012359811	3300005353	Switchgrass Rhizosphere	DPGAGGKQTLGMLYSQWLATVLQAMGVPPNEYERWGTKGYGYPYITKESWTPPFGKHYGDTSSRYFQAASDWLPFLKA*
Ga0070675_1002092771	3300005354	Miscanthus Rhizosphere	DPGAGGKQTLGMLYSQWLATVLQAMGVPPSEFERWGSKGYGYPYITKESWTPPFGKHYGDTSSRYFQAASDWLPFLKV*
Ga0070675_1004384181	3300005354	Miscanthus Rhizosphere	YSQWLATVLETMGVPTSEFERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFMNASTALPFLKV*
Ga0070688_1017059241	3300005365	Switchgrass Rhizosphere	RTTNKSSEYTPDGGSKQVLGLLYSQWLATVLQSMGVPPTEFERWDHKGYGVPYLGTVDWGPPFKSHYTSTTSRYFTDASTILPFLKA*
Ga0070667_1002155281	3300005367	Switchgrass Rhizosphere	LLYSQWLATVLQTMGVPPSEFERWGYKGYGYPFITKESWTPPFGKHYGTTSSRYFTDASTYLPFLKA*
Ga0070667_1002824143	3300005367	Switchgrass Rhizosphere	KQTLGLLYSQWLATVLQTMGVPPSEFERWGTKGYGYPFITKESWTPPFAKHYGDTSSRYFTNASTILPFLKPA*
Ga0070700_1004311222	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	STYDPGAGGKQTLGLLYNQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKV*
Ga0070681_106451762	3300005458	Corn Rhizosphere	STYDPGAGGKQTLGLLYSQWLATVLQTMGVPPSEYERWGTKGYGYPYITKETWTPPFAKHYGDTSSRYFQDASKVLPFLMA*
Ga0070685_104069491	3300005466	Switchgrass Rhizosphere	TYDPGAGGKQTLGLLYNQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKGA*
Ga0070706_1014275632	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	CDYRRTTNKSSEYDPGAGGKQVLGVLYQQWLATVLQAMGVPPAEFERWDHKGYGVPYLGTVDWGPPFKSHYTSTTSRYFTDASNILPFLGA*
Ga0070684_1012997671	3300005535	Corn Rhizosphere	GLLYSQWLATVLQAMGVPPSEYERWGYKGYGYPYITKETWTPPFAKHYGDTSSRYFADASKWLPFLM*
Ga0070665_1003653441	3300005548	Switchgrass Rhizosphere	VLQTMGVPPSEFERWGYKGYGYPFITKESWTPPFGKHYGTTSSRYFTDASTYLPFLKA*
Ga0070664_1009141141	3300005564	Corn Rhizosphere	LCDYRRMGNSGSTYDPGAGGKQTLGLLYSQWLATVLETMGVPATEFERWGYKGYGYPYITKETWTPPFAKHYGDTSSRYFQNASTYLPFLMA*
Ga0068852_1020450562	3300005616	Corn Rhizosphere	LYAQWLATVLQAMGVPPSEFERWGYKGYGYPFITKETWTPPFAKHYGDTTSRYFQDASNWLPFLKA*
Ga0066903_1035118301	3300005764	Tropical Forest Soil	QLIDYRRLGTKSSEYDPGAGGKQTLGLLYAQWLGTVLQAMGVPPSEYERWDGKGYGVPYVGSVSWGPPFASHYGDTTSRYFADASKILPFLQA*
Ga0074470_102553401	3300005836	Sediment (Intertidal)	QWLATVLQTMGVPPSEYERWGTKGYGYPYITKESWTPPFGKHYGDTSSRYFVNASTILPFLAKT*
Ga0066651_105633991	3300006031	Soil	WLATVLEAMGVPTSEFERWGSKGYGYPYITKETWTPPFAKHYGDMSSRYFQDASKSLPFLT*
Ga0082029_14310401	3300006169	Termite Nest	DQYCGLLYGQWLATVMRAMGLSPSEWEHWDHKGYGVPFLTAESWTPPYRQHYQNTSSRYFTMSSDVLPVIGA*
Ga0097621_1011227021	3300006237	Miscanthus Rhizosphere	GSTYDPGAGGKQTLGLLYSQWLATVLQAMGVPPSEYERWGYKGYGYPYITKESWTPPFAKHYGDTSSRYFQDASKFLPFLQA*
Ga0068865_1006504661	3300006881	Miscanthus Rhizosphere	AAGRMKTGMLVDYRRMGNSASQFDPGAGGKQTLGLLYSQWLATVLQTMGVPPSEFERWGYKGYGYPYITKQGQMPPFKEYYGDTNGRYFTMASNWLPFLKA*
Ga0075424_1019916092	3300006904	Populus Rhizosphere	GGKQTLGLLYSQWLATVLQTMGVPPSEYERWGTKGYGYPYITKETWTPPFAKHYGDTSSRYFQDASKVLPFLMA*
Ga0105243_121452942	3300009148	Miscanthus Rhizosphere	ASQFDAGGGGKQTLGLLYSQWLGTVLQAMGVPPSEFERWGTKGYGYPYITKETWTPPFGKHYGDTSSRYFQAASDWLPFLKA*
Ga0111538_126739012	3300009156	Populus Rhizosphere	QSMRVAPAEFERWGHRGYGVPFLTQESFGPPYLRHYVNTDSRYFQSASDVLPVIGA*
Ga0105242_105557412	3300009176	Miscanthus Rhizosphere	CDYRRMGNSGSTYDPGAGGKQTLGLLYSQWLATVLETMGVPTSEFERWGAKGYGYPYITKESWTPPFAKHYGDTSSRYFQDASKVLPFLMA*
Ga0105242_115610501	3300009176	Miscanthus Rhizosphere	KQTLGLLYSQWLATVLQTMGVPPSEFERWGTKGYGYPFITKESWTPPFGKHYGTTSSRYFTDASTYLPFLKA*
Ga0134124_112906582	3300010397	Terrestrial Soil	QTLGLLYSQWLGTVLQAMGVPPAEFERWGYKGYGYPYITKETWTPPFAKHYGDTSSRYFQMASDWLPFLKAA*
Ga0134123_110123131	3300010403	Terrestrial Soil	RRMGNSGSTYDPGAGGKQTLGLLYNQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKV*
Ga0134123_125861652	3300010403	Terrestrial Soil	MRGWKSIQAMGVPPSEFERWDHKGYGVPFISKESWTPPYAKHYGDTSSKYFTMASDILPFLKA*
Ga0137436_11054091	3300011423	Soil	KTGQFVDYRRTANRASSFNPGAGGTQYLGLLHSQFLATVLRSMGLPPSEFERWGHKGYGVPSLTGEDWTPPFRQHYESTTSRYFTMASDVLPFLQA*
Ga0137428_10453341	3300011432	Soil	MGNTASQFDPGAGGKQTLGLLYSQWLATVLQAMGVPASEYERWGSKGYGYPYITKESWTPPFGKHYGDTSSRYFQAASDWLPFLKA*
Ga0137452_11498811	3300011441	Soil	QFDPGAGGKQTLGMLYSQWLATVLQAMGVPPSEYERWGTKGYGYPYITKESWTPPFGKHYGDTSSRYFQAASDWLPFLKA*
Ga0137371_113466031	3300012356	Vadose Zone Soil	AAGRIKTGLLCDYRRMGNAASTYDPGAGSKQTLGLLYSQWLATVLEAMGVPTSEFERWGAKGYGYPYITKETWTPPFAKHYGDTSSRYFQDASKPLPFLT*
Ga0157294_101689631	3300012892	Soil	LGLLYSQWLATVLQSMGVPPTEFERWDHKGYGVPYLGTVDWGPPFKSHYTSTTSRYFTDASTILPFLKA*
Ga0157303_102969512	3300012896	Soil	LLYAQWLGTVLQAMGVPPSEYERWGHKGYGVPYVGQVDWGPPFASHYGDTSSRYFTDSSNILPFLPA*
Ga0157282_104282412	3300012904	Soil	ATVLRSMGLPPSEFERWGHKGYGVPSLTGEDWTPPYRQHYESTSSRYFQMASDVLPGLQA
Ga0157308_100942341	3300012910	Soil	PSEFERWGTKGYGYPYITKESWTPPFGKHYGDTSSRYFKDASAYLPFLKA*
Ga0157308_102510232	3300012910	Soil	LYSQWLATVLQTMGVPPSEFERWGTKGYGYPFITKESWTPPFGKHYGTTSSRYFTDASTYLPFLKA*
Ga0164241_108243442	3300012943	Soil	IVLQAMGVPPSEFERWGTKGYGYPYITKESWTPPFGKHYGDTSSRYFQAASDWLPFLKA*
Ga0164299_104905001	3300012958	Soil	ASQYDPGAGGKQTLGLLYSQWLGTVLQAMGVPPPEFERWGTKGYGYPYITKETWTPPFAKHYGDTSSRYFQNASTYLPFLMA*
Ga0164302_105350271	3300012961	Soil	LATVLQTMGVPPSEFERWGTKGYGYPFITKESWTPPFAKHYGDTSSRYFTNASTILPFLKPA*
Ga0164304_109498771	3300012986	Soil	GRLKTGMLCDYRRMGNSGSTYDPGAGGKQTLGLLYSQWLATVLQTMGVPPSEFERWGTKGYGYPFITKESWTPPFAKHYGDTSSRYFTNASTILPFLKPA*
Ga0164305_115585952	3300012989	Soil	STYDPGAGGKQTLGLLYSQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFMNASTILPFLAKT*
Ga0157372_131419422	3300013307	Corn Rhizosphere	LLYSQWLATVLQAMGVPASEYERWGYKGYGYPFITKESWTPPFGKHYGDTSSRYFMNASTYLPFLSKT*
Ga0157379_113294972	3300014968	Switchgrass Rhizosphere	KTGLLCDYRRMGNSGSTYDPGAGGKQTLGLLYSQWLATVLETMGVPTSEFERWGAKGYGYPYITKESWTPPFAKHYGDTSSRYFQDASKVLPFLMA*
Ga0173480_111110142	3300015200	Soil	LVDYRRTTSKSSEYDPGAGGKQVLGLLYAQWLATVLQAMGVPPSEYERWGHKGYGVPYVGQVDWGPPFDSHYGDTSSRYFTDSSNILPFLTA*
Ga0132258_126506923	3300015371	Arabidopsis Rhizosphere	VPPSEFERWGYKGYGVPFITKDSWTPTFAKHYTDTSSRYFQMASDWLPFLKA*
Ga0132258_138477791	3300015371	Arabidopsis Rhizosphere	ASTYDPGAGGKQTLGVLYSQWLATVLQTMGVPASEFERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFTNASTMLPFLKA*
Ga0132256_1024987563	3300015372	Arabidopsis Rhizosphere	STYDPGAGGKQTLGLLYSQWLATGLQAMGVPTSEFERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKGA*
Ga0132256_1038905891	3300015372	Arabidopsis Rhizosphere	GVFADYRRVGNPDSTYDPHAGGTMALGLLYSQFLATVLQSMGVPPSEFERWGHKGYGVPFLSQQQGVPPYVKHYQNTSSRYFQMASDILPFLKA*
Ga0163161_117280781	3300017792	Switchgrass Rhizosphere	RMGNSGSTYDPGAGGKQTLGLLYNQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKV
Ga0184625_105435562	3300018081	Groundwater Sediment	MGVPPSEFERWGYKGYGYPYITKESWTPPFGKHYGDTSSRYFQAASDWLPFLKA
Ga0066667_111037631	3300018433	Grasslands Soil	DPGAGGKQTLGLLYSQWLATVLQTMGVPPAEYERWGTKGYGYPYVTKETWTPPFAKHYGDTSSRYFMNASTILPFLGKT
Ga0190269_113227201	3300018465	Soil	NSSFDPGAGGKQHLGLLYNQWLATALQAMGSPPSEFERWGHKGYGVPFLTQADWTPPYRQHYGNTSSRYFQMASDILPGLKA
Ga0190273_122960982	3300018920	Soil	VLQAMGVPPSDFERWGHKGYGVPFISKESWTPPYAKHYGDTSSRYFTMASDVLPFLKA
Ga0190264_106299701	3300019377	Soil	TVLQSMGVAPSEFERWGHKGYGVPFVSAEGWTPPYAKHYGNTSSRYFQMASDVLPFLRA
Ga0193697_10813681	3300020005	Soil	SQFDPGAGGKQTLGMLYSQWLATVLQAMGVPPSEFERWGTKGYGYPFITKESWTPPFGKHYGDTSSRYFQAASDWLPFLKA
Ga0193696_10502772	3300020016	Soil	SGSQFDPGAGGKQTLGMLYSQWLATVLQAMGVPPSEFERWGTKGYGYPFITKESWTPPFGKHYGDTSSRYFQAASDWLPFLKA
Ga0193706_11237011	3300021339	Soil	LYNQWLATVLQAMGVGPSEFERWGHKGYGVPFVSAETWTPPYAKHYGNTSSRYFSMASDVLPFLRA
Ga0247751_10495681	3300023069	Soil	GAGGKQVLGLLYAQWLATVLQAMGVPPSEYERWGHKGYGVPYVGQVDWGPPFDSHYGDTSSRYFTDSSNILPFLTA
Ga0247688_10971711	3300024186	Soil	GSKQTLGLLYSQWLATVLQTMGVPPSEFERWGYKGYGYPYITKESWTPPFAKHYGDTSSRYFMNASTVLPFLKA
Ga0247673_10199621	3300024224	Soil	SKQTLGLLYSQWLATVLQTMGVPPSEFERWGYKGYGYPYITKESWTPPFAKHYGDTSSRYFMNASTVLPFLKA
Ga0247664_10246971	3300024232	Soil	VLQTMGVPPSEFERWGYKGYGYPYITKESWTPPFAKHYGDTSSRYFMNASTVLPFLKA
Ga0247674_10154421	3300024275	Soil	QWLATVLQTMGVPPSEFERWGYKGYGYPYITKESWTPPFAKHYGDTSSRYFMNASTVLPFLKA
Ga0247678_10452712	3300024325	Soil	TVLQTMGVPPSEFERWGYKGYGYPYITKESWTPPFAKHYGDTSSRYFMNASTVLPFLKA
Ga0207680_104527902	3300025903	Switchgrass Rhizosphere	SAAGRLKTGLLCDYRRMGNSGSTYDPGAGGKQTLGLLYSQWLATVLETMGVPTSEFERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFMNASTALPFLKV
Ga0207707_104920652	3300025912	Corn Rhizosphere	LQTMGVPPSEYERWGTKGYGYPYITKETWTPPFAKHYGDTSSRYFQDASKVLPFLMA
Ga0207659_100804484	3300025926	Miscanthus Rhizosphere	LVDYRRMGNTASQFDPGAGGKQTLGMLYSQWLATVLQAMGVPPSEFERWGSKGYGYPYITKESWTPPFGKHYGDTSSRYFQAASDWLPFLKV
Ga0207659_114686011	3300025926	Miscanthus Rhizosphere	LYSQWLATVLQTMGVPPSEFERWGTKGYGYPYITKESWTPPFGKHYGDTSSRYFTGASAYLPFLKV
Ga0207701_109198451	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	DYRRMGNTASQFDPGAGGKQTLGMLYSQWLATVLQAMGVPPSEYERWGSKGYGYPYITKESWTPPFGKHYGDTSSRYFQAASDWLPFLKA
Ga0207686_107907661	3300025934	Miscanthus Rhizosphere	CDYRRMGNSGSTYDPGAGGKQTLGLLYSQWLATVLETMGVPTSEFERWGAKGYGYPYITKESWTPPFAKHYGDTSSRYFQDASKVLPFLMA
Ga0207704_106508731	3300025938	Miscanthus Rhizosphere	YRRIGNTASQFDPGAGGKQTLGLLYSQWLATVLQTMGVPPSEFERWGYKGYGYPFITKESWTPPFGKHYGDTSSRYFMNASTYLPFLKPA
Ga0207704_114508732	3300025938	Miscanthus Rhizosphere	TLGVLYSQWLATVLQATRLQPSEFERWGYKGYGYPYITKQGQMPPFKEYYGDTNGRYFTMASNWLPFLKA
Ga0207679_116891762	3300025945	Corn Rhizosphere	DPGAGGKQTLGLLYSQWLATVLQAMGVPTSEFERWGYKGYGYPFITKESWTPPFGKHYGDTSSRYFMNASTYLPFLSKT
Ga0207651_106450472	3300025960	Switchgrass Rhizosphere	YRRMGNTASQFDPGAGGKQTLGLLYSQWLGTVLQAMGVPPSEFERWGYKGYGYPYITKETWTPPFGKHYGDTSSRYFQAASDWLPFLKA
Ga0207712_119209451	3300025961	Switchgrass Rhizosphere	GSTYDPGAGGKQTLGLLYNQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKV
Ga0207640_119620131	3300025981	Corn Rhizosphere	LGLLYNQWLATVLQAMGVPPSDFERWGHKGYGLPFISKESWTPPYAKHYGDTSSKYFTMASDVLPFLKA
Ga0207677_122482762	3300026023	Miscanthus Rhizosphere	STYDPGAGGKQTLGLLYNQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKGA
Ga0207708_109462372	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	AMGVPASEYERWGYKGYGYPFITKESWTPPFGKHYGDTSSRYFMNASTALPFLKV
Ga0209181_100583591	3300027878	Freshwater	LLYSQWLATVLQAMGLPPAEFERWGHKGYGVPFITLEGWTPRFAQHYADTSSRYFTGASDRLPIITA
Ga0265318_102476961	3300028577	Rhizosphere	LNTGVFCDYRRTDAAAAQYDPGAGGKQQFGLLYSQWLATVLQAMRVPPSEFERWGSKGYGYPFITQDTWTPPFAKHYGDTSSRYFQMASDYLPFLKAAA
Ga0307304_105788912	3300028885	Soil	GGKQTLGLLYSQWLATVLQAMGVPSSEFERWGYKGYGYPYITKESWTPPFAKHYGDTSSRYFTGASTPLPFLKV
Ga0307500_101676301	3300031198	Soil	GKQTLGLLYNQWLATVLQAMRVPPSEFERWGYKGYGVPFITKESWTPPFGKHYGDTSSRYFQMASDYLPFLKA
Ga0307497_106066032	3300031226	Soil	TLGMLYSQWLATVLQAMGVPPSEFERWGTKGYGYPYITKETWTPPFAKHYGDTSSRYFQDASKVLPFLMA
Ga0265339_103429931	3300031249	Rhizosphere	SEFERWGGKGYGYPFITQDTWTPPFAKHYVDTSSRYFQMASDYLPFLKASA
Ga0310888_100669381	3300031538	Soil	YNQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKGA
Ga0310886_104610882	3300031562	Soil	GLLCDYRRVGNSASTYDPGAGGKQTLGLLYSQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKGA
Ga0265313_102520632	3300031595	Rhizosphere	GAAGALNTGVFCDYRRTDAAAAQYDPGAGGKQQFGLLYSQWLATVLQAMRVPPSEFERWGSKGYGYPFITQDTWTPPFAKHYGDTSSRYFQMASDYLPFLKAAA
Ga0310813_122708371	3300031716	Soil	AASTYDPGAGGKQTLGLLYSQWLATVLQAMGVPPSEYERWGYKGYGYPYITKETWTPPFAKHYGDTSSRYFADASKWLPFLM
Ga0307416_1009150441	3300032002	Rhizosphere	PGAGGKQTLGLLYSQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFGKHYGDTSSRYFKDASTYLPFLKA
Ga0310897_100606111	3300032003	Soil	RMKTGLLCDYRRVGNSASTYDPGAGGKQTLGLLYSQWLATVLQTMGVPPSEYERWGYKGYGYPFITKESWTPPFAKHYGDTSSRYFKDASTILPFLKGA
Ga0335080_118676001	3300032828	Soil	GLLYNQWLATVLQTMGVPPSEFERWGHQGYGYPYVGTAGWEPPYQAHYTDTMSRYFTDASKLLPFLAV
Ga0364943_0359294_391_555	3300034354	Sediment	MGVPPSEFERWGTKGYGYPYITKESWTPPFAKHFGDTSSRYFQDASKFLPFLMA
Ga0364923_0166969_3_260	3300034690	Sediment	GNSASTYDPGAGGKQTLGLPYSQWLATVLQAMGVPPSEYERWGSKGYGYPYITKESWTPPFAKHYGDTSSRYFQAASDWLPFLKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086137

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences